Genes within 1Mb (chr1:28285808:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060656 PTPRU -950708 eQTL 3.44e-02 -0.478 0.226 0.00105 0.0 0.00393
ENSG00000116353 MECR -945134 pQTL 1.74e-02 0.208 0.0873 0.0 0.0 0.00361
ENSG00000186501 TMEM222 963663 eQTL 4.88e-03 -0.369 0.131 0.00768 0.00236 0.00393
ENSG00000198492 YTHDF2 -450813 eQTL 2.85e-02 -0.215 0.0979 0.0 0.0 0.00393
ENSG00000233975 LINC02574 623086 eQTL 2.00e-01 0.27 0.211 0.00105 0.0 0.00393
ENSG00000235912 AL031729.1 636389 eQTL 2.30e-01 0.35 0.291 0.00105 0.0 0.00393
ENSG00000242125 SNHG3 -220172 eQTL 7.18e-02 0.155 0.0861 0.00125 0.0 0.00393
ENSG00000274266 SNORA73A -221558 eQTL 1.20e-01 0.509 0.328 0.0011 0.0 0.00393


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina