JOB

PEF1(ENSG00000162517)

View on Pheweb.jp , UCSC , GWAS Catalog , GTEx , gnomAD

Statistical fine-mapping results from Japan COVID-19 Task Force

(Shown only for PIP>0.001)

qtl plot

Variant ID	rs ID	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	PIP (FINEMAP)	MAF
chr1:31637227:AAGACTCCTTCAC:A	rs200410189	-7669	eQTL	1.74e-02	0.102	0.0426	0.0	0.0294
chr1:31655942:C:T	\N	11046	eQTL	3.51e-02	-0.389	0.185	0.0	0.00147
chr1:31630254:C:T	\N	-14642	eQTL	4.80e-02	-0.259	0.131	0.0	0.00343
chr1:31628381:C:A	\N	-16515	eQTL	4.24e-03	0.479	0.167	0.00187	0.00196
chr1:31628035:A:AGAT	rs113461431	-16861	eQTL	1.64e-02	0.102	0.0426	0.0	0.0294
chr1:31627007:TCGGGGGATCTGCCCCTACC:T	rs549411327	-17889	eQTL	2.16e-03	0.2	0.0652	0.00328	0.0123
chr1:31663080:G:C	\N	18184	eQTL	4.17e-03	-0.411	0.143	0.00193	0.00245
chr1:31626238:G:C	rs573967594	-18658	eQTL	3.90e-03	0.205	0.071	0.00198	0.0103
chr1:31666789:G:A	\N	21893	eQTL	2.27e-02	0.34	0.149	0.0	0.00294
chr1:31620176:G:A	rs2280385	-24720	eQTL	1.78e-02	0.101	0.0426	0.0	0.0294
chr1:31619070:C:A	rs80175769	-25826	eQTL	1.78e-02	0.101	0.0426	0.0	0.0294
chr1:31616808:A:G	\N	-28088	eQTL	1.18e-02	-0.303	0.12	0.0	0.00393
chr1:31616387:C:T	\N	-28509	eQTL	2.26e-02	-0.154	0.0673	0.0	0.0132
chr1:31614804:G:A	rs79659859	-30092	eQTL	1.74e-02	0.101	0.0425	0.0	0.0294
chr1:31611032:C:T	rs12091854	-33864	eQTL	2.18e-02	0.0996	0.0433	0.0	0.029
chr1:31610601:G:A	rs79872592	-34295	eQTL	2.18e-02	0.0996	0.0433	0.0	0.029
chr1:31684264:G:A	\N	39368	eQTL	1.19e-02	0.471	0.187	0.0	0.00147
chr1:31684370:C:G	\N	39474	eQTL	3.53e-02	-0.391	0.185	0.0	0.00147
chr1:31605289:G:A	rs145247293	-39607	eQTL	2.18e-02	0.0996	0.0433	0.0	0.029
chr1:31605264:G:GT	\N	-39632	eQTL	2.19e-02	0.0995	0.0433	0.0	0.029
chr1:31685384:G:A	\N	40488	eQTL	4.68e-02	0.139	0.0699	0.0	0.0108
chr1:31685485:C:A	\N	40589	eQTL	4.62e-02	0.14	0.07	0.0	0.0108
chr1:31600338:T:A	rs78014753	-44558	eQTL	2.18e-02	0.0996	0.0433	0.0	0.029
chr1:31689556:T:C	\N	44660	eQTL	4.62e-02	0.14	0.07	0.0	0.0108
chr1:31691011:T:C	\N	46115	eQTL	1.17e-02	-0.341	0.135	0.0	0.00343
chr1:31692887:G:A	\N	47991	eQTL	1.69e-02	0.354	0.148	0.0	0.00245
chr1:31596465:G:T	rs4949448	-48431	eQTL	2.55e-02	0.0484	0.0216	0.0	0.129
chr1:31588807:C:G	\N	-56089	eQTL	1.31e-02	0.467	0.188	0.0	0.00147
chr1:31588168:C:T	\N	-56728	eQTL	4.96e-02	-0.261	0.133	0.0	0.00343
chr1:31584466:C:T	\N	-60430	eQTL	4.76e-02	-0.147	0.0743	0.0	0.00981
chr1:31584333:G:T	\N	-60563	eQTL	1.31e-02	0.467	0.188	0.0	0.00147
chr1:31583809:C:A	rs77510620	-61087	eQTL	5.94e-03	0.191	0.0693	0.00142	0.0108
chr1:31582031:G:T	rs945213	-62865	eQTL	4.48e-02	0.0293	0.0146	0.0	0.47
chr1:31581152:G:A	\N	-63744	eQTL	4.73e-02	-0.264	0.133	0.0	0.00343
chr1:31573463:C:T	rs556736626	-71433	eQTL	5.70e-03	0.199	0.0719	0.00147	0.0103
chr1:31728938:C:T	\N	84042	eQTL	4.43e-02	0.413	0.205	0.0	0.00196
chr1:31558127:A:G	rs4388746	-86769	eQTL	4.67e-02	0.0304	0.0152	0.0	0.337
chr1:31732660:C:T	\N	87764	eQTL	5.24e-03	0.395	0.141	0.00159	0.00245
chr1:31557029:T:G	rs6698851	-87867	eQTL	3.77e-02	0.0317	0.0153	0.0	0.336
chr1:31555816:G:A	rs10798875	-89080	eQTL	3.77e-02	0.0317	0.0153	0.0	0.336
chr1:31555364:C:T	rs10798874	-89532	eQTL	3.56e-02	0.0321	0.0153	0.0	0.337
chr1:31734729:T:C	\N	89833	eQTL	4.65e-02	0.312	0.157	0.0	0.00245
chr1:31553885:C:CT	\N	-91011	eQTL	2.49e-02	0.0328	0.0146	0.0	0.405
chr1:31553853:C:T	rs10753254	-91043	eQTL	2.49e-02	0.0328	0.0146	0.0	0.406
chr1:31737372:C:T	\N	92476	eQTL	1.22e-02	-0.422	0.168	0.0	0.00196
chr1:31550373:A:G	rs4949441	-94523	eQTL	4.46e-02	0.0296	0.0147	0.0	0.385
chr1:31549103:G:T	\N	-95793	eQTL	3.34e-02	0.249	0.117	0.0	0.00294
chr1:31547225:C:T	rs4245635	-97671	eQTL	3.21e-02	0.0313	0.0146	0.0	0.419
chr1:31756303:T:C	\N	111407	eQTL	1.21e-02	-0.423	0.168	0.0	0.00196
chr1:31758068:C:T	rs374447342	113172	eQTL	6.86e-03	0.2	0.0738	0.00122	0.00932
chr1:31531107:A:G	rs143283858	-113789	eQTL	4.15e-02	-0.12	0.0588	0.0	0.0157
chr1:31526184:G:A	\N	-118712	eQTL	4.13e-02	0.165	0.0809	0.0	0.00834
chr1:31767329:G:A	rs374820981	122433	eQTL	4.57e-03	0.205	0.0722	0.00175	0.00981
chr1:31774661:G:A	rs10914477	129765	eQTL	6.04e-03	-0.0692	0.0251	0.0014	0.102
chr1:31514908:C:T	\N	-129988	eQTL	4.31e-02	0.163	0.0805	0.0	0.00834
chr1:31775626:G:A	rs630319	130730	eQTL	1.49e-02	-0.0411	0.0168	0.0	0.259
chr1:31775732:T:C	rs630789	130836	eQTL	8.27e-03	-0.0442	0.0167	0.00113	0.261
chr1:31776861:A:G	rs645891	131965	eQTL	8.49e-03	-0.0443	0.0168	0.00111	0.268
chr1:31779088:CAGA:C	rs34239257	134192	eQTL	2.54e-02	-0.0379	0.0169	0.0	0.256
chr1:31796415:A:G	rs75448731	151519	eQTL	3.38e-02	0.0702	0.033	0.0	0.0525
chr1:31797191:G:T	rs577891553	152295	eQTL	7.73e-03	0.204	0.0764	0.00118	0.00981
chr1:31491554:T:G	rs145404105	-153342	eQTL	4.80e-03	0.182	0.0645	0.00167	0.0128
chr1:31799684:A:T	\N	154788	eQTL	3.50e-02	0.285	0.135	0.0	0.00294
chr1:31489349:T:C	\N	-155547	eQTL	2.60e-02	-0.425	0.19	0.0	0.00147
chr1:31800609:G:A	\N	155713	eQTL	1.76e-03	-0.483	0.154	0.00407	0.00245
chr1:31475263:C:T	\N	-169633	eQTL	2.38e-02	0.206	0.0908	0.0	0.00736
chr1:31473938:G:A	\N	-170958	eQTL	2.01e-02	0.339	0.146	0.0	0.00294
chr1:31819689:T:A	\N	174793	eQTL	1.33e-02	-0.434	0.175	0.0	0.00196
chr1:31468258:G:A	\N	-176638	eQTL	2.12e-02	0.491	0.213	0.0	0.00147
chr1:31825486:T:C	rs138271780	180590	eQTL	8.86e-03	-0.0914	0.0349	0.00107	0.0599
chr1:31463968:C:A	\N	-180928	eQTL	5.91e-03	-0.511	0.185	0.00146	0.00147
chr1:31826550:C:T	\N	181654	eQTL	3.18e-02	0.359	0.167	0.0	0.00196
chr1:31461739:C:T	\N	-183157	eQTL	2.93e-02	0.315	0.144	0.0	0.00245
chr1:31829780:G:A	\N	184884	eQTL	1.77e-02	0.309	0.13	0.0	0.00343
chr1:31457621:G:A	\N	-187275	eQTL	1.79e-02	-0.35	0.147	0.0	0.00245
chr1:31832235:C:CA	\N	187339	eQTL	4.71e-02	0.411	0.207	0.0	0.00196
chr1:31840133:G:A	\N	195237	eQTL	2.75e-03	0.587	0.196	0.00272	0.00196
chr1:31841301:G:A	\N	196405	eQTL	1.35e-02	-0.433	0.175	0.0	0.00196
chr1:31443168:C:G	\N	-201728	eQTL	3.37e-02	0.303	0.142	0.0	0.00294
chr1:31854476:G:A	\N	209580	eQTL	1.08e-02	0.397	0.155	0.0	0.00245
chr1:31857820:C:A	\N	212924	eQTL	1.35e-02	-0.433	0.175	0.0	0.00196
chr1:31426674:C:T	\N	-218222	eQTL	4.68e-02	-0.412	0.207	0.0	0.00147
chr1:31866861:C:G	\N	221965	eQTL	1.34e-02	-0.437	0.176	0.0	0.00196
chr1:31876046:G:A	\N	231150	eQTL	3.51e-02	0.393	0.186	0.0	0.00147
chr1:31888998:C:T	rs368132125	244102	eQTL	2.86e-02	0.15	0.0683	0.0	0.0113
chr1:31900318:T:A	\N	255422	eQTL	3.95e-03	-0.527	0.182	0.002	0.00196
chr1:31907029:G:A	\N	262133	eQTL	4.73e-02	0.41	0.206	0.0	0.00196
chr1:31374077:G:A	\N	-270819	eQTL	8.79e-03	0.552	0.21	0.00108	0.00147
chr1:31927769:C:A	\N	282873	eQTL	5.23e-03	0.59	0.211	0.00159	0.00147
chr1:31350923:G:A	\N	-293973	eQTL	1.44e-02	-0.403	0.164	0.0	0.00196
chr1:31350855:G:T	\N	-294041	eQTL	4.40e-02	0.219	0.109	0.0	0.00442
chr1:31946372:G:T	\N	301476	eQTL	1.16e-02	0.388	0.153	0.0	0.00245
chr1:31950372:G:A	\N	305476	eQTL	5.51e-03	0.577	0.207	0.00142	0.00147
chr1:31333874:TA:T	rs377401470	-311022	eQTL	1.11e-02	-0.123	0.0484	0.0	0.0309
chr1:31974183:A:G	\N	329287	eQTL	2.39e-02	0.292	0.129	0.0	0.00343
chr1:31976957:T:C	\N	332061	eQTL	3.01e-02	-0.26	0.12	0.0	0.00393
chr1:31982693:A:G	\N	337797	eQTL	2.97e-02	0.279	0.128	0.0	0.00343
chr1:31303193:G:A	\N	-341703	eQTL	2.61e-02	0.315	0.141	0.0	0.00343
chr1:31987909:G:A	\N	343013	eQTL	5.05e-03	0.577	0.205	0.00162	0.00147
chr1:31298506:C:A	\N	-346390	eQTL	8.74e-03	0.553	0.21	0.00109	0.00147
chr1:31289796:G:A	\N	-355100	eQTL	8.72e-03	0.553	0.21	0.00109	0.00147
chr1:32002274:A:G	rs117575681	357378	eQTL	3.52e-02	-0.0694	0.0329	0.0	0.0584
chr1:31283289:T:G	\N	-361607	eQTL	1.79e-02	0.5	0.211	0.0	0.00147
chr1:32008812:CCAA:C	\N	363916	eQTL	2.20e-02	-0.417	0.182	0.0	0.00147
chr1:32021420:C:G	\N	376524	eQTL	3.05e-03	0.576	0.194	0.00248	0.00196
chr1:32022847:G:A	\N	377951	eQTL	2.56e-02	0.203	0.0909	0.0	0.00638
chr1:32024240:G:A	\N	379344	eQTL	1.15e-02	0.449	0.178	0.0	0.00147
chr1:32028654:C:T	\N	383758	eQTL	2.83e-02	-0.253	0.115	0.0	0.00393
chr1:32031256:T:C	\N	386360	eQTL	1.17e-02	-0.371	0.147	0.0	0.00245
chr1:32033564:G:A	\N	388668	eQTL	2.48e-02	0.368	0.164	0.0	0.00196
chr1:32039862:T:C	\N	394966	eQTL	1.10e-02	0.417	0.164	0.0	0.00196
chr1:32047844:A:C	\N	402948	eQTL	2.04e-02	0.435	0.187	0.0	0.00147
chr1:32051327:ACTGCCTT:A	\N	406431	eQTL	1.29e-02	0.442	0.178	0.0	0.00147
chr1:32056318:C:T	\N	411422	eQTL	9.41e-03	0.448	0.172	0.00103	0.00196
chr1:31229849:G:C	rs12408714	-415047	eQTL	1.39e-02	0.0826	0.0335	0.0	0.0491
chr1:31225664:TG:T	rs148633383	-419232	eQTL	1.37e-02	0.0827	0.0335	0.0	0.0491
chr1:31223570:A:C	rs151179200	-421326	eQTL	1.30e-02	0.0829	0.0333	0.0	0.0491
chr1:31222354:G:A	rs78663062	-422542	eQTL	1.29e-02	0.083	0.0333	0.0	0.0491
chr1:32070031:G:A	\N	425135	eQTL	1.09e-02	0.417	0.164	0.0	0.00196
chr1:31219560:G:A	\N	-425336	eQTL	2.09e-02	0.49	0.212	0.0	0.00147
chr1:31219279:C:A	\N	-425617	eQTL	4.85e-02	-0.202	0.102	0.0	0.00491
chr1:31218451:G:C	rs115006964	-426445	eQTL	1.25e-02	0.0834	0.0333	0.0	0.0491
chr1:31217147:T:G	rs113817485	-427749	eQTL	1.25e-02	0.0834	0.0333	0.0	0.0491
chr1:31215695:C:T	rs12409835	-429201	eQTL	1.17e-02	0.0842	0.0333	0.0	0.0486
chr1:31210201:G:T	\N	-434695	eQTL	1.67e-02	-0.449	0.187	0.0	0.00196
chr1:32088300:C:G	\N	443404	eQTL	1.09e-02	0.417	0.164	0.0	0.00196
chr1:32092671:A:G	\N	447775	eQTL	2.04e-02	0.435	0.187	0.0	0.00147
chr1:32110697:C:T	\N	465801	eQTL	2.04e-02	0.435	0.187	0.0	0.00147
chr1:32111206:AT:A	\N	466310	eQTL	1.09e-02	0.418	0.164	0.0	0.00196
chr1:31177772:C:T	rs76542416	-467124	eQTL	7.25e-03	0.107	0.0397	0.00123	0.0363
chr1:32135366:C:T	\N	490470	eQTL	2.57e-02	0.366	0.164	0.0	0.00196
chr1:31152955:C:G	\N	-491941	eQTL	4.82e-02	-0.326	0.165	0.0	0.00196
chr1:31151592:A:G	\N	-493304	eQTL	4.93e-02	-0.421	0.214	0.0	0.00147
chr1:32138591:G:GT	\N	493695	eQTL	1.09e-02	0.418	0.164	0.0	0.00196
chr1:32140839:T:C	\N	495943	eQTL	1.09e-02	0.418	0.164	0.0	0.00196
chr1:32144515:A:T	\N	499619	eQTL	3.98e-03	-0.417	0.144	0.00198	0.00294
chr1:31143420:G:T	\N	-501476	eQTL	4.52e-02	0.231	0.115	0.0	0.00442
chr1:32147848:C:T	\N	502952	eQTL	4.37e-02	0.391	0.193	0.0	0.00147
chr1:32148706:G:A	rs547491499	503810	eQTL	4.73e-02	-0.13	0.0656	0.0	0.0128
chr1:32148804:G:A	\N	503908	eQTL	2.54e-03	0.584	0.193	0.00291	0.00196
chr1:31129078:G:T	\N	-515818	eQTL	4.95e-02	0.147	0.0745	0.0	0.00932
chr1:32163068:C:T	\N	518172	eQTL	1.09e-02	0.418	0.164	0.0	0.00196
chr1:32165885:C:T	\N	520989	eQTL	4.52e-02	-0.176	0.0879	0.0	0.00736
chr1:31120588:C:T	\N	-524308	eQTL	1.65e-02	-0.313	0.13	0.0	0.00393
chr1:31116736:A:T	\N	-528160	eQTL	2.24e-02	-0.316	0.138	0.0	0.00294
chr1:31115869:C:A	\N	-529027	eQTL	2.62e-02	0.18	0.0807	0.0	0.00834
chr1:32178565:G:A	\N	533669	eQTL	1.09e-02	0.418	0.164	0.0	0.00196
chr1:31108891:G:A	\N	-536005	eQTL	4.79e-02	-0.327	0.165	0.0	0.00196
chr1:31102673:G:C	\N	-542223	eQTL	1.56e-02	-0.436	0.18	0.0	0.00196
chr1:32187903:C:T	\N	543007	eQTL	2.50e-02	-0.146	0.065	0.0	0.0147
chr1:31076672:C:T	\N	-568224	eQTL	4.62e-02	-0.329	0.165	0.0	0.00196
chr1:32219066:C:T	\N	574170	eQTL	4.35e-02	0.391	0.193	0.0	0.00147
chr1:31068551:A:C	rs113730819	-576345	eQTL	4.90e-02	0.131	0.0664	0.0	0.0123
chr1:31067596:C:T	\N	-577300	eQTL	2.62e-02	0.327	0.147	0.0	0.00245
chr1:32222287:G:A	\N	577391	eQTL	2.67e-02	-0.154	0.0694	0.0	0.0113
chr1:31067470:G:A	rs116721753	-577426	eQTL	4.05e-02	0.137	0.0666	0.0	0.0118
chr1:31061591:T:A	\N	-583305	eQTL	4.61e-02	0.262	0.131	0.0	0.00294
chr1:32233667:G:T	\N	588771	eQTL	9.40e-03	0.243	0.0934	0.00104	0.00589
chr1:32234605:G:C	\N	589709	eQTL	1.11e-02	0.419	0.165	0.0	0.00196
chr1:31041611:T:C	\N	-603285	eQTL	4.19e-02	0.331	0.162	0.0	0.00196
chr1:31041535:T:TCTAGATCTCATTGAATACACCCAACCTATTTCA	\N	-603361	eQTL	4.33e-02	0.162	0.0801	0.0	0.0113
chr1:32255415:G:A	rs76221898	610519	eQTL	1.13e-02	-0.0837	0.033	0.0	0.0559
chr1:31034352:T:C	rs7555505	-610544	eQTL	4.32e-02	0.0909	0.0449	0.0	0.029
chr1:31026181:A:G	\N	-618715	eQTL	3.33e-02	0.175	0.0819	0.0	0.00883
chr1:31015455:C:A	\N	-629441	eQTL	3.06e-02	0.315	0.146	0.0	0.00245
chr1:32284130:G:A	\N	639234	eQTL	1.35e-02	0.338	0.136	0.0	0.00294
chr1:32290001:C:A	\N	645105	eQTL	1.14e-02	0.422	0.167	0.0	0.00196
chr1:32297391:A:G	rs80029764	652495	eQTL	1.22e-02	-0.082	0.0327	0.0	0.0559
chr1:32309316:C:G	\N	664420	eQTL	2.56e-02	0.366	0.164	0.0	0.00196
chr1:30961940:C:G	\N	-682956	eQTL	4.21e-02	-0.328	0.161	0.0	0.00196
chr1:30957331:A:G	\N	-687565	eQTL	1.47e-02	-0.356	0.146	0.0	0.00245
chr1:32335630:G:A	\N	690734	eQTL	2.56e-02	0.364	0.163	0.0	0.00196
chr1:32340874:C:T	\N	695978	eQTL	1.79e-02	0.235	0.0989	0.0	0.00589
chr1:30946467:T:A	\N	-698429	eQTL	4.18e-02	-0.328	0.161	0.0	0.00196
chr1:30934802:C:T	\N	-710094	eQTL	1.57e-02	-0.429	0.177	0.0	0.00196
chr1:30934684:T:C	\N	-710212	eQTL	4.55e-02	0.143	0.0712	0.0	0.0103
chr1:32356518:G:A	rs117824273	711622	eQTL	1.76e-02	-0.107	0.0449	0.0	0.0363
chr1:32358024:C:T	\N	713128	eQTL	9.40e-03	0.448	0.172	0.00103	0.00196
chr1:32364991:G:A	\N	720095	eQTL	7.05e-03	-0.203	0.0751	0.00126	0.0108
chr1:30921485:C:T	rs76572548	-723411	eQTL	2.51e-02	0.0734	0.0327	0.0	0.0525
chr1:30921433:A:G	rs80013020	-723463	eQTL	3.04e-02	0.0718	0.0331	0.0	0.0525
chr1:30920113:A:T	rs76022363	-724783	eQTL	2.84e-02	0.0814	0.0371	0.0	0.0412
chr1:30919763:T:A	rs78802369	-725133	eQTL	2.18e-02	0.0766	0.0333	0.0	0.0515
chr1:30918069:T:G	rs77582876	-726827	eQTL	3.18e-02	0.08	0.0372	0.0	0.0422
chr1:32371727:G:A	\N	726831	eQTL	2.43e-02	0.369	0.164	0.0	0.00196
chr1:30917631:C:T	\N	-727265	eQTL	3.18e-02	0.08	0.0372	0.0	0.0422
chr1:30917198:T:G	\N	-727698	eQTL	4.82e-02	-0.0379	0.0192	0.0	0.171
chr1:30916379:C:T	rs112989353	-728517	eQTL	4.52e-02	0.074	0.0369	0.0	0.0432
chr1:30914537:C:T	\N	-730359	eQTL	4.57e-02	0.328	0.164	0.0	0.00196
chr1:30914303:G:A	rs111767372	-730593	eQTL	4.55e-02	0.0739	0.0369	0.0	0.0432
chr1:30913116:C:T	rs78341828	-731780	eQTL	3.80e-02	0.0686	0.033	0.0	0.054
chr1:32377356:G:A	\N	732460	eQTL	2.43e-02	0.369	0.164	0.0	0.00196
chr1:32379456:A:G	\N	734560	eQTL	4.04e-02	-0.422	0.205	0.0	0.00147
chr1:30909784:A:G	rs79237170	-735112	eQTL	4.70e-02	0.0744	0.0374	0.0	0.0417
chr1:30909775:C:T	\N	-735121	eQTL	4.89e-02	0.315	0.16	0.0	0.00196
chr1:32381192:C:T	rs79776486	736296	eQTL	1.64e-02	-0.0804	0.0334	0.0	0.0535
chr1:30907336:G:C	rs76931768	-737560	eQTL	4.39e-02	0.0675	0.0334	0.0	0.053
chr1:32390189:T:C	\N	745293	eQTL	5.30e-03	0.204	0.0729	0.00158	0.0108
chr1:32390960:C:T	\N	746064	eQTL	2.50e-02	0.471	0.21	0.0	0.00147
chr1:30883755:C:T	\N	-761141	eQTL	3.05e-02	-0.227	0.105	0.0	0.00491
chr1:30879428:C:T	\N	-765468	eQTL	3.81e-02	0.334	0.161	0.0	0.00196
chr1:30879161:AC:A	\N	-765735	eQTL	1.35e-02	0.527	0.213	0.0	0.00147
chr1:32413594:C:G	\N	768698	eQTL	3.26e-02	-0.165	0.0772	0.0	0.00981
chr1:30872884:G:A	rs117399193	-772012	eQTL	4.10e-02	0.141	0.0688	0.0	0.0113
chr1:32422102:G:C	\N	777206	eQTL	2.61e-02	0.363	0.163	0.0	0.00196
chr1:30861938:T:G	\N	-782958	eQTL	3.48e-02	0.374	0.177	0.0	0.00196
chr1:32435991:G:A	\N	791095	eQTL	1.52e-02	0.178	0.0732	0.0	0.0113
chr1:30849063:A:C	rs78761717	-795833	eQTL	2.26e-02	0.0533	0.0233	0.0	0.105
chr1:30843924:C:T	\N	-800972	eQTL	3.90e-02	0.332	0.161	0.0	0.00196
chr1:30843879:T:C	\N	-801017	eQTL	2.41e-02	-0.217	0.0959	0.0	0.00589
chr1:30840452:C:T	\N	-804444	eQTL	3.61e-02	0.271	0.129	0.0	0.00343
chr1:32450079:G:A	\N	805183	eQTL	1.62e-02	-0.412	0.171	0.0	0.00196
chr1:32452836:C:G	\N	807940	eQTL	3.65e-02	0.423	0.202	0.0	0.00147
chr1:32455495:G:A	\N	810599	eQTL	3.69e-03	0.579	0.199	0.00212	0.00147
chr1:32464662:G:A	\N	819766	eQTL	3.75e-03	0.578	0.199	0.00209	0.00147
chr1:30814884:C:T	\N	-830012	eQTL	3.90e-02	0.403	0.195	0.0	0.00196
chr1:30813252:C:T	\N	-831644	eQTL	3.29e-02	-0.375	0.175	0.0	0.00196
chr1:30806312:GT:G	\N	-838584	eQTL	3.34e-02	0.285	0.134	0.0	0.00343
chr1:30796657:T:C	\N	-848239	eQTL	3.30e-02	0.289	0.135	0.0	0.00343
chr1:30794697:T:C	\N	-850199	eQTL	4.83e-02	-0.191	0.0965	0.0	0.00589
chr1:30791036:G:A	\N	-853860	eQTL	5.40e-03	-0.219	0.0785	0.00156	0.00785
chr1:32501797:T:C	\N	856901	eQTL	1.98e-02	-0.386	0.165	0.0	0.00196
chr1:30785481:C:T	rs76678258	-859415	eQTL	3.12e-02	0.0592	0.0274	0.0	0.078
chr1:30785333:G:A	\N	-859563	eQTL	1.50e-02	-0.317	0.13	0.0	0.00294
chr1:30784319:C:T	\N	-860577	eQTL	3.32e-02	-0.184	0.0863	0.0	0.00736
chr1:32505480:A:C	\N	860584	eQTL	2.35e-02	0.313	0.138	0.0	0.00294
chr1:32507274:A:G	\N	862378	eQTL	4.44e-02	-0.418	0.208	0.0	0.00147
chr1:30781707:A:T	\N	-863189	eQTL	2.44e-02	-0.247	0.109	0.0	0.00442
chr1:30777609:G:A	\N	-867287	eQTL	3.67e-02	0.325	0.155	0.0	0.00245
chr1:32521752:C:A	\N	876856	eQTL	1.59e-02	0.249	0.103	0.0	0.00491
chr1:32523068:G:T	rs139763111	878172	eQTL	3.48e-02	0.0514	0.0243	0.0	0.102
chr1:32527931:A:G	\N	883035	eQTL	4.56e-03	0.573	0.202	0.00175	0.00147
chr1:30742919:T:C	\N	-901977	eQTL	1.12e-02	0.297	0.117	0.0	0.00393
chr1:30741620:C:T	\N	-903276	eQTL	3.07e-02	-0.378	0.175	0.0	0.00196
chr1:32572677:A:G	rs6694177	927781	eQTL	3.28e-02	0.0321	0.015	0.0	0.375
chr1:30716842:G:A	\N	-928054	eQTL	1.02e-02	0.194	0.0754	0.0	0.00932
chr1:30709766:T:C	\N	-935130	eQTL	2.25e-02	-0.453	0.198	0.0	0.00147
chr1:32581758:T:C	\N	936862	eQTL	3.67e-02	0.317	0.152	0.0	0.00245
chr1:32584268:G:A	\N	939372	eQTL	2.52e-02	0.189	0.0841	0.0	0.00785
chr1:32589550:CTGTT:C	\N	944654	eQTL	2.03e-02	-0.388	0.167	0.0	0.00196
chr1:30695920:C:T	rs12119696	-948976	eQTL	4.00e-02	0.0309	0.015	0.0	0.346
chr1:30695372:C:T	rs1830705	-949524	eQTL	1.36e-02	0.0356	0.0144	0.0	0.488
chr1:30695315:G:A	rs1072498	-949581	eQTL	4.70e-02	0.0299	0.015	0.0	0.345
chr1:30694055:G:A	rs12089369	-950841	eQTL	1.47e-02	0.0441	0.0181	0.0	0.195
chr1:30693941:G:A	rs12089275	-950955	eQTL	1.46e-02	0.0442	0.0181	0.0	0.195
chr1:30691029:G:A	rs1188445	-953867	eQTL	3.02e-02	0.0326	0.015	0.0	0.385
chr1:30689583:T:C	rs1188447	-955313	eQTL	2.52e-02	0.0352	0.0157	0.0	0.331
chr1:30688733:G:A	rs78744828	-956163	eQTL	2.18e-02	0.0387	0.0169	0.0	0.217
chr1:30688636:G:A	rs7555192	-956260	eQTL	2.25e-02	0.0384	0.0168	0.0	0.217
chr1:30687925:A:C	rs78507227	-956971	eQTL	1.82e-02	0.04	0.0169	0.0	0.217
chr1:32602794:G:A	rs140295961	957898	eQTL	9.76e-03	-0.057	0.022	0.0	0.123
chr1:30685255:C:T	rs6669132	-959641	eQTL	2.95e-03	0.0448	0.015	0.0026	0.365
chr1:30683152:T:C	rs1746887	-961744	eQTL	2.46e-02	0.0351	0.0156	0.0	0.337
chr1:30682898:GC:G	rs78422901	-961998	eQTL	1.96e-02	0.0396	0.0169	0.0	0.217
chr1:30681884:G:C	rs56025922	-963012	eQTL	1.97e-02	0.0396	0.0169	0.0	0.217
chr1:30681565:C:T	rs56131000	-963331	eQTL	1.97e-02	0.0395	0.0169	0.0	0.217
chr1:30681178:G:A	rs112873088	-963718	eQTL	1.96e-02	0.0396	0.0169	0.0	0.217
chr1:30678605:C:T	rs1408151	-966291	eQTL	1.88e-02	0.0399	0.0169	0.0	0.217
chr1:30678472:C:A	rs2700541	-966424	eQTL	2.55e-02	0.0347	0.0155	0.0	0.336
chr1:32613060:C:T	\N	968164	eQTL	4.36e-03	0.338	0.118	0.00181	0.00393
chr1:30676697:T:C	\N	-968199	eQTL	2.32e-03	0.312	0.102	0.00315	0.0054
chr1:30675146:T:G	rs1188382	-969750	eQTL	2.56e-02	0.0348	0.0156	0.0	0.335
chr1:30672915:T:C	rs4949176	-971981	eQTL	3.75e-03	0.0437	0.015	0.00209	0.365
chr1:32617820:C:T	\N	972924	eQTL	3.22e-02	0.182	0.085	0.0	0.00736
chr1:30671713:G:A	rs2377485	-973183	eQTL	2.21e-02	0.0388	0.0169	0.0	0.217
chr1:32618914:G:A	rs77340669	974018	eQTL	9.97e-03	-0.14	0.0541	0.0	0.0221
chr1:30670188:A:G	rs1212652	-974708	eQTL	2.63e-02	0.0346	0.0155	0.0	0.337
chr1:30669964:T:C	rs4949175	-974932	eQTL	2.03e-02	0.0393	0.0169	0.0	0.218
chr1:30668932:A:G	rs76773680	-975964	eQTL	2.10e-02	0.0389	0.0168	0.0	0.218
chr1:32621162:A:G	\N	976266	eQTL	1.93e-02	0.18	0.0767	0.0	0.00932
chr1:30667785:G:C	rs1188427	-977111	eQTL	4.21e-02	0.0322	0.0158	0.0	0.321
chr1:30666733:T:C	rs1983821	-978163	eQTL	7.25e-03	0.0387	0.0144	0.00118	0.477
chr1:30666453:G:C	\N	-978443	eQTL	3.86e-02	-0.232	0.112	0.0	0.00491
chr1:30665942:C:T	rs56166286	-978954	eQTL	2.44e-02	0.0381	0.0169	0.0	0.222
chr1:30664722:C:T	rs72652777	-980174	eQTL	2.56e-02	0.0366	0.0164	0.0	0.239
chr1:30664303:A:G	rs72652775	-980593	eQTL	3.26e-02	0.036	0.0168	0.0	0.224
chr1:30658301:C:G	\N	-986595	eQTL	1.01e-02	0.254	0.0987	0.0	0.0054
chr1:30647763:C:A	\N	-997133	eQTL	4.66e-02	0.144	0.0721	0.0	0.0108
chr1:30647757:A:G	\N	-997139	eQTL	4.66e-02	0.144	0.0721	0.0	0.0108

Expression Fold Change in Massively Parallel Reporter Assay (MPRA)

[Click here to download the full results]

mpra plot

Variant ID	rs ID	TSS Distance	P-Value	Expression Fold Change	Tier	Cell Type
chr1:30907336:G:C	rs76931768	-737560	0.759	-0.043	None	K562
chr1:30907336:G:C	rs76931768	-737560	0.998	0.000497	None	HepG2