JOB

AC104170.2(ENSG00000238140)

View on Pheweb.jp , UCSC , GWAS Catalog , GTEx , gnomAD

Statistical fine-mapping results from Japan COVID-19 Task Force

(Shown only for PIP>0.001)

qtl plot

Variant ID	rs ID	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	PIP (FINEMAP)	MAF
chr1:51452755:C:G	\N	-8966	eQTL	7.41e-03	1.25	0.465	0.00196	0.00196
chr1:51439165:A:G	\N	-22556	eQTL	4.34e-02	0.638	0.316	0.0	0.00442
chr1:51486929:G:A	\N	25208	eQTL	3.44e-02	1.22	0.575	0.0	0.00147
chr1:51432985:G:C	\N	-28736	eQTL	3.45e-02	1.21	0.573	0.0	0.00147
chr1:51432679:CCA:C	\N	-29042	eQTL	6.53e-03	1.36	0.5	0.00208	0.00147
chr1:51423734:G:A	\N	-37987	eQTL	1.46e-02	0.795	0.325	0.00118	0.00442
chr1:51421024:C:T	\N	-40697	eQTL	3.09e-02	-0.451	0.209	0.0	0.00932
chr1:51503081:A:G	\N	41360	eQTL	8.75e-03	0.674	0.257	0.00165	0.00589
chr1:51408979:T:C	\N	-52742	eQTL	3.09e-02	-0.451	0.209	0.0	0.00932
chr1:51516509:C:G	\N	54788	eQTL	2.57e-02	-0.464	0.208	0.0	0.00981
chr1:51518555:C:T	\N	56834	eQTL	7.04e-03	1.35	0.501	0.00196	0.00147
chr1:51399423:G:A	\N	-62298	eQTL	3.45e-02	1.21	0.573	0.0	0.00147
chr1:51525044:C:G	\N	63323	eQTL	4.82e-02	0.255	0.129	0.0	0.024
chr1:51529345:C:T	\N	67624	eQTL	7.04e-03	1.35	0.501	0.00196	0.00147
chr1:51391969:G:A	\N	-69752	eQTL	4.52e-02	1.02	0.507	0.0	0.00147
chr1:51390313:T:C	\N	-71408	eQTL	1.19e-02	-1.26	0.499	0.00135	0.00147
chr1:51536006:TA:T	\N	74285	eQTL	1.52e-02	1.7	0.698	0.00114	0.00147
chr1:51385633:C:A	\N	-76088	eQTL	4.92e-02	0.65	0.33	0.0	0.00442
chr1:51538651:G:C	\N	76930	eQTL	7.70e-03	1.24	0.463	0.0019	0.00196
chr1:51541824:C:G	\N	80103	eQTL	6.79e-03	1.36	0.5	0.00202	0.00147
chr1:51543926:G:A	\N	82205	eQTL	6.79e-03	1.36	0.5	0.00202	0.00147
chr1:51544016:A:G	\N	82295	eQTL	5.63e-04	-0.713	0.206	0.0199	0.00932
chr1:51375801:G:A	\N	-85920	eQTL	4.74e-02	-0.459	0.231	0.0	0.00736
chr1:51367842:TCTC:T	\N	-93879	eQTL	7.28e-03	1.25	0.466	0.00199	0.00196
chr1:51555916:T:G	\N	94195	eQTL	1.22e-02	-1.07	0.425	0.00129	0.00245
chr1:51560157:C:G	\N	98436	eQTL	2.33e-02	0.439	0.193	0.0	0.0103
chr1:51560232:C:G	\N	98511	eQTL	2.33e-02	0.439	0.193	0.0	0.0103
chr1:51570787:T:A	\N	109066	eQTL	7.60e-03	1.24	0.464	0.00192	0.00196
chr1:51575656:A:G	rs144822262	113935	eQTL	4.79e-02	-0.386	0.195	0.0	0.0108
chr1:51578784:G:A	\N	117063	eQTL	5.53e-03	-1.52	0.546	0.00251	0.00147
chr1:51582636:C:G	\N	120915	eQTL	3.40e-02	1.22	0.576	0.0	0.00147
chr1:51582680:A:T	\N	120959	eQTL	5.53e-03	-1.52	0.546	0.00251	0.00147
chr1:51338377:G:GC	\N	-123344	eQTL	4.29e-02	0.792	0.391	0.0	0.00343
chr1:51587899:C:T	rs150417049	126178	eQTL	2.21e-02	-0.355	0.155	0.0	0.0162
chr1:51332385:C:T	\N	-129336	eQTL	3.60e-03	0.655	0.225	0.0034	0.00883
chr1:51596976:A:G	\N	135255	eQTL	5.55e-03	-1.46	0.527	0.00248	0.00147
chr1:51602551:T:A	\N	140830	eQTL	4.17e-02	1.03	0.505	0.0	0.00147
chr1:51316459:T:C	\N	-145262	eQTL	7.22e-03	1.25	0.466	0.002	0.00196
chr1:51607389:T:C	\N	145668	eQTL	1.62e-02	-1.34	0.556	0.00108	0.00147
chr1:51304814:C:T	\N	-156907	eQTL	6.65e-03	1.36	0.501	0.00205	0.00147
chr1:51303960:GA:G	rs148338965	-157761	eQTL	2.07e-03	-0.61	0.197	0.00546	0.0103
chr1:51641522:G:A	\N	179801	eQTL	2.15e-02	0.888	0.385	0.0	0.00245
chr1:51275907:T:C	rs146831844	-185814	eQTL	4.63e-02	0.268	0.134	0.0	0.0216
chr1:51656711:G:A	\N	194990	eQTL	8.34e-03	1.22	0.462	0.00178	0.00196
chr1:51658431:A:G	\N	196710	eQTL	1.79e-02	-1.7	0.718	0.001	0.00147
chr1:51254598:G:C	\N	-207123	eQTL	7.13e-03	1.25	0.465	0.00202	0.00196
chr1:51676109:A:G	\N	214388	eQTL	4.17e-02	0.422	0.207	0.0	0.00981
chr1:51679530:A:G	\N	217809	eQTL	5.42e-03	-0.196	0.0704	0.00244	0.0815
chr1:51679761:T:C	\N	218040	eQTL	4.09e-02	1.03	0.505	0.0	0.00147
chr1:51682058:C:T	\N	220337	eQTL	1.88e-02	-1.31	0.555	0.0	0.00147
chr1:51685584:G:C	\N	223863	eQTL	9.39e-03	-1.3	0.499	0.00162	0.00147
chr1:51237348:T:G	rs192813810	-224373	eQTL	4.93e-03	-0.536	0.19	0.00263	0.0108
chr1:51231613:T:A	\N	-230108	eQTL	4.93e-02	-0.718	0.365	0.0	0.00294
chr1:51221854:A:AGTTTT	\N	-239867	eQTL	1.20e-02	-1.25	0.499	0.00133	0.00147
chr1:51220981:G:A	\N	-240740	eQTL	6.21e-03	0.884	0.322	0.00229	0.00491
chr1:51711974:G:A	\N	250253	eQTL	2.13e-02	-1.28	0.555	0.0	0.00147
chr1:51200628:C:T	rs375830135	-261093	eQTL	1.21e-03	-0.612	0.188	0.00897	0.0103
chr1:51192553:C:A	\N	-269168	eQTL	4.02e-02	-0.802	0.39	0.0	0.00245
chr1:51179617:A:C	\N	-282104	eQTL	1.90e-02	-1.05	0.449	0.0	0.00245
chr1:51175100:A:T	rs141331510	-286621	eQTL	1.12e-03	-0.634	0.194	0.00958	0.0103
chr1:51762288:T:C	\N	300567	eQTL	2.69e-02	-1.16	0.522	0.0	0.00147
chr1:51762289:C:T	\N	300568	eQTL	2.69e-02	-1.16	0.522	0.0	0.00147
chr1:51150555:T:C	\N	-311166	eQTL	3.92e-02	-0.804	0.389	0.0	0.00245
chr1:51776204:C:A	\N	314483	eQTL	2.45e-02	-0.55	0.244	0.0	0.00638
chr1:51147006:T:C	\N	-314715	eQTL	4.01e-02	0.836	0.407	0.0	0.00343
chr1:51777791:T:TC	\N	316070	eQTL	4.24e-04	-0.867	0.245	0.025	0.00736
chr1:51781488:T:C	\N	319767	eQTL	4.98e-02	0.406	0.207	0.0	0.00981
chr1:51138802:C:T	rs116996608	-322919	eQTL	4.37e-02	0.151	0.075	0.0	0.078
chr1:51788110:CTGT:C	\N	326389	eQTL	2.11e-02	-0.557	0.241	0.0	0.00687
chr1:51134293:G:T	\N	-327428	eQTL	1.15e-02	0.652	0.258	0.00134	0.00589
chr1:51790687:A:G	rs41293251	328966	eQTL	1.66e-02	-0.198	0.0825	0.00107	0.0594
chr1:51794773:C:T	\N	333052	eQTL	1.93e-02	-0.551	0.235	0.0	0.00736
chr1:51800438:G:C	\N	338717	eQTL	5.95e-03	-1.47	0.534	0.00235	0.00147
chr1:51122497:C:T	\N	-339224	eQTL	9.62e-03	-0.825	0.318	0.00156	0.00393
chr1:51802110:T:G	\N	340389	eQTL	1.30e-03	1.25	0.389	0.00846	0.00245
chr1:51808079:T:G	\N	346358	eQTL	6.57e-03	-1.34	0.491	0.00215	0.00147
chr1:51113368:TTATTAA:T	rs374952190	-348353	eQTL	9.26e-04	-0.642	0.193	0.0115	0.0103
chr1:51097991:T:C	\N	-363730	eQTL	1.77e-02	-1.33	0.56	0.00102	0.00147
chr1:51832746:G:GA	\N	371025	eQTL	2.99e-02	0.883	0.406	0.0	0.00294
chr1:51842032:C:A	\N	380311	eQTL	3.55e-02	-1.2	0.57	0.0	0.00147
chr1:51848413:G:T	\N	386692	eQTL	7.04e-03	1.35	0.501	0.00196	0.00147
chr1:51870275:G:A	\N	408554	eQTL	2.88e-02	0.874	0.399	0.0	0.00245
chr1:51052984:T:G	\N	-408737	eQTL	4.31e-02	-0.445	0.22	0.0	0.00883
chr1:51032987:A:G	\N	-428734	eQTL	2.67e-02	-0.446	0.201	0.0	0.0118
chr1:51028250:T:C	\N	-433471	eQTL	4.89e-02	-0.857	0.434	0.0	0.00196
chr1:51898842:G:A	\N	437121	eQTL	7.07e-03	1.35	0.501	0.00195	0.00147
chr1:51022878:A:G	\N	-438843	eQTL	7.37e-03	1.35	0.503	0.00189	0.00147
chr1:51013860:G:T	rs145512174	-447861	eQTL	7.59e-03	-0.517	0.193	0.00187	0.0108
chr1:50998696:A:ACC	\N	-463025	eQTL	1.71e-02	-1.32	0.553	0.00105	0.00147
chr1:50987130:C:G	\N	-474591	eQTL	5.14e-03	-1.46	0.519	0.00263	0.00147
chr1:50987124:C:T	\N	-474597	eQTL	5.14e-03	-1.46	0.519	0.00263	0.00147
chr1:51937377:T:C	\N	475656	eQTL	1.30e-03	1.25	0.389	0.00845	0.00245
chr1:50979066:A:C	\N	-482655	eQTL	7.90e-03	1.34	0.503	0.00179	0.00147
chr1:51944880:G:A	rs117000115	483159	eQTL	4.04e-02	-0.176	0.0856	0.0	0.0564
chr1:51953342:G:C	\N	491621	eQTL	1.31e-03	1.25	0.389	0.00844	0.00245
chr1:51960800:C:T	rs75202059	499079	eQTL	9.21e-03	0.302	0.116	0.00163	0.0299
chr1:50960390:G:A	\N	-501331	eQTL	1.50e-02	0.817	0.335	0.00114	0.00343
chr1:51968085:G:A	\N	506364	eQTL	1.35e-02	-0.622	0.251	0.00125	0.00638
chr1:50943860:C:T	\N	-517861	eQTL	4.67e-02	-0.864	0.434	0.0	0.00196
chr1:51983423:A:G	rs139814845	521702	eQTL	2.07e-02	0.282	0.122	0.0	0.028
chr1:51985602:C:G	\N	523881	eQTL	2.18e-02	0.71	0.309	0.0	0.00393
chr1:50923670:T:C	rs139155926	-538051	eQTL	7.71e-03	-0.517	0.194	0.00185	0.0108
chr1:50888942:C:T	\N	-572779	eQTL	1.55e-02	0.813	0.335	0.00112	0.00343
chr1:50882814:C:T	\N	-578907	eQTL	6.87e-03	1.24	0.459	0.00208	0.00196
chr1:52047508:C:T	rs117956241	585787	eQTL	2.43e-02	0.348	0.154	0.0	0.0167
chr1:52055308:G:T	\N	593587	eQTL	1.55e-03	1.23	0.387	0.00721	0.00245
chr1:52075421:C:G	\N	613700	eQTL	2.74e-02	-1.2	0.541	0.0	0.00147
chr1:52076210:A:G	\N	614489	eQTL	2.34e-02	0.353	0.155	0.0	0.0167
chr1:50843534:G:A	\N	-618187	eQTL	7.11e-03	1.17	0.434	0.00202	0.00196
chr1:50831135:AT:A	\N	-630586	eQTL	1.51e-02	0.816	0.335	0.00114	0.00343
chr1:52093986:C:T	\N	632265	eQTL	4.20e-02	0.545	0.267	0.0	0.00638
chr1:52103334:G:C	\N	641613	eQTL	3.48e-02	1.08	0.512	0.0	0.00147
chr1:50820051:C:A	\N	-641670	eQTL	1.54e-02	0.814	0.335	0.00112	0.00343
chr1:52109629:C:G	rs117285134	647908	eQTL	2.59e-02	0.243	0.109	0.0	0.0358
chr1:52115551:C:T	\N	653830	eQTL	4.33e-02	1.15	0.57	0.0	0.00147
chr1:50798783:C:T	\N	-662938	eQTL	3.88e-02	-0.902	0.436	0.0	0.00196
chr1:50790482:A:G	\N	-671239	eQTL	4.83e-02	0.179	0.0905	0.0	0.0633
chr1:52147831:C:G	\N	686110	eQTL	1.07e-02	1.22	0.478	0.00147	0.00196
chr1:52155981:C:T	\N	694260	eQTL	3.41e-02	0.744	0.351	0.0	0.00343
chr1:52174509:A:G	\N	712788	eQTL	1.25e-02	-0.627	0.25	0.00134	0.00687
chr1:52178055:A:G	rs139049573	716334	eQTL	3.91e-02	-0.224	0.109	0.0	0.0343
chr1:52186476:C:G	rs7519110	724755	eQTL	3.92e-02	-0.224	0.109	0.0	0.0343
chr1:52190069:A:ATAAC	rs71579910	728348	eQTL	3.91e-02	-0.224	0.109	0.0	0.0343
chr1:50728007:T:C	\N	-733714	eQTL	4.55e-02	0.181	0.0902	0.0	0.0638
chr1:52199257:C:T	\N	737536	eQTL	1.14e-02	1.23	0.485	0.0014	0.00196
chr1:50718874:T:C	\N	-742847	eQTL	4.97e-02	-0.341	0.174	0.0	0.0147
chr1:52207190:T:C	\N	745469	eQTL	3.90e-02	0.433	0.209	0.0	0.00932
chr1:52214079:A:G	\N	752358	eQTL	3.03e-02	0.764	0.352	0.0	0.00343
chr1:52214938:G:A	\N	753217	eQTL	1.09e-02	-0.641	0.252	0.00148	0.00687
chr1:50706733:T:C	\N	-754988	eQTL	6.98e-03	1.17	0.434	0.00205	0.00196
chr1:52217731:G:A	\N	756010	eQTL	3.64e-02	0.85	0.406	0.0	0.00245
chr1:50705345:G:A	\N	-756376	eQTL	2.65e-02	-0.451	0.203	0.0	0.0113
chr1:50703016:T:A	\N	-758705	eQTL	1.46e-02	0.498	0.204	0.00116	0.00883
chr1:52222533:C:T	rs66496551	760812	eQTL	3.08e-02	-0.226	0.105	0.0	0.0368
chr1:50698378:A:G	\N	-763343	eQTL	4.25e-02	0.184	0.0904	0.0	0.0633
chr1:50695636:AG:A	\N	-766085	eQTL	1.50e-02	0.817	0.335	0.00114	0.00343
chr1:50694869:G:A	\N	-766852	eQTL	6.81e-03	1.38	0.51	0.00201	0.00147
chr1:50694551:C:T	\N	-767170	eQTL	4.03e-02	0.459	0.224	0.0	0.00687
chr1:52230382:A:G	\N	768661	eQTL	1.66e-02	-1.37	0.569	0.00106	0.00147
chr1:52230418:C:T	\N	768697	eQTL	2.96e-02	0.767	0.352	0.0	0.00343
chr1:52233962:G:A	\N	772241	eQTL	2.52e-02	-1.13	0.504	0.0	0.00147
chr1:50688216:T:G	\N	-773505	eQTL	4.87e-02	-0.541	0.274	0.0	0.00638
chr1:52235310:A:G	rs140684391	773589	eQTL	1.80e-02	0.369	0.156	0.0	0.0172
chr1:50682826:G:A	\N	-778895	eQTL	4.71e-02	-0.204	0.103	0.0	0.0461
chr1:52244916:G:A	\N	783195	eQTL	1.56e-03	1.23	0.388	0.00715	0.00245
chr1:50676495:C:T	\N	-785226	eQTL	4.31e-04	-1.83	0.518	0.0255	0.00196
chr1:52252540:T:C	\N	790819	eQTL	3.40e-02	1.09	0.512	0.0	0.00147
chr1:52253518:G:A	\N	791797	eQTL	4.16e-02	0.554	0.272	0.0	0.00638
chr1:52263516:G:A	\N	801795	eQTL	7.61e-03	1.34	0.5	0.00184	0.00147
chr1:52275551:A:G	\N	813830	eQTL	3.54e-02	1.08	0.511	0.0	0.00147
chr1:50647491:AT:A	\N	-814230	eQTL	6.52e-03	1.18	0.434	0.00217	0.00196
chr1:50644455:CA:C	\N	-817266	eQTL	3.55e-02	0.192	0.091	0.0	0.0623
chr1:50642843:T:TTTG	\N	-818878	eQTL	2.72e-02	0.736	0.333	0.0	0.00393
chr1:52284333:A:G	\N	822612	eQTL	1.56e-03	1.23	0.387	0.00716	0.00245
chr1:50638171:C:T	\N	-823550	eQTL	7.06e-03	1.17	0.434	0.00203	0.00196
chr1:50637614:T:G	rs10888702	-824107	eQTL	3.43e-03	-0.498	0.17	0.00356	0.0132
chr1:52286855:A:G	rs35354820	825134	eQTL	2.94e-02	-0.226	0.104	0.0	0.0373
chr1:52289199:G:A	rs1288706	827478	eQTL	4.04e-02	-0.226	0.11	0.0	0.0343
chr1:52290259:G:C	\N	828538	eQTL	1.52e-02	1.19	0.488	0.00112	0.00196
chr1:50632370:CAAGAT:C	\N	-829351	eQTL	1.49e-02	0.818	0.335	0.00115	0.00343
chr1:50632147:G:A	\N	-829574	eQTL	4.22e-02	0.591	0.291	0.0	0.00491
chr1:50623134:T:G	\N	-838587	eQTL	2.80e-02	-0.442	0.201	0.0	0.0113
chr1:50616050:G:A	\N	-845671	eQTL	3.39e-02	1.24	0.585	0.0	0.00147
chr1:50614033:G:A	\N	-847688	eQTL	4.02e-02	0.183	0.0889	0.0	0.0643
chr1:50612673:G:A	\N	-849048	eQTL	2.24e-02	0.82	0.358	0.0	0.00393
chr1:50601551:G:A	\N	-860170	eQTL	2.73e-02	0.735	0.333	0.0	0.00393
chr1:52323329:C:A	\N	861608	eQTL	1.55e-03	1.23	0.387	0.00719	0.00245
chr1:50595906:TC:T	\N	-865815	eQTL	7.11e-03	1.17	0.434	0.00202	0.00196
chr1:52330578:C:T	rs2762821	868857	eQTL	4.40e-02	-0.223	0.111	0.0	0.0343
chr1:50592418:C:T	\N	-869303	eQTL	7.11e-03	1.38	0.51	0.00194	0.00147
chr1:50582272:C:A	\N	-879449	eQTL	1.48e-02	0.818	0.335	0.00116	0.00343
chr1:50580944:G:C	\N	-880777	eQTL	4.19e-02	-0.89	0.437	0.0	0.00196
chr1:52350908:G:A	\N	889187	eQTL	7.51e-03	-1.34	0.501	0.00193	0.00147
chr1:52353085:G:GT	\N	891364	eQTL	1.55e-03	1.23	0.387	0.00721	0.00245
chr1:52362495:G:C	\N	900774	eQTL	3.50e-02	1.08	0.511	0.0	0.00147
chr1:50559443:G:C	\N	-902278	eQTL	2.18e-02	-0.817	0.356	0.0	0.00393
chr1:50558974:G:C	\N	-902747	eQTL	4.76e-03	-1.44	0.509	0.0028	0.00147
chr1:52368686:TCCCGCGC:T	\N	906965	eQTL	1.37e-02	0.424	0.172	0.00119	0.0142
chr1:52376598:G:A	rs1983833	914877	eQTL	2.49e-02	-0.237	0.105	0.0	0.0368
chr1:50541003:A:G	\N	-920718	eQTL	3.69e-02	-0.352	0.168	0.0	0.0157
chr1:52384453:A:G	\N	922732	eQTL	3.27e-02	0.845	0.395	0.0	0.00245
chr1:50537559:A:G	\N	-924162	eQTL	4.76e-03	-1.44	0.509	0.0028	0.00147
chr1:52388859:A:T	\N	927138	eQTL	6.92e-03	-0.726	0.268	0.00209	0.00638
chr1:50534544:G:C	\N	-927177	eQTL	6.40e-03	1.39	0.51	0.00211	0.00147
chr1:50530777:A:C	\N	-930944	eQTL	5.54e-04	-1.85	0.535	0.021	0.00196
chr1:50530678:G:C	\N	-931043	eQTL	3.53e-02	0.184	0.0871	0.0	0.0648
chr1:52395699:C:G	\N	933978	eQTL	1.68e-02	0.378	0.158	0.00102	0.0167
chr1:50520946:T:C	\N	-940775	eQTL	3.51e-02	0.184	0.0871	0.0	0.0648
chr1:50520360:T:C	\N	-941361	eQTL	3.53e-02	0.184	0.0871	0.0	0.0648
chr1:52409541:C:T	\N	947820	eQTL	3.72e-02	1.08	0.516	0.0	0.00147
chr1:50507561:G:A	\N	-954160	eQTL	2.74e-02	-0.787	0.356	0.0	0.00393
chr1:52427196:A:G	\N	965475	eQTL	1.94e-02	0.891	0.38	0.0	0.00294
chr1:50485938:C:T	\N	-975783	eQTL	3.41e-02	0.184	0.0868	0.0	0.0648
chr1:52438848:T:C	\N	977127	eQTL	1.68e-02	0.379	0.158	0.00102	0.0167
chr1:50481828:T:C	\N	-979893	eQTL	4.76e-03	-1.44	0.509	0.0028	0.00147
chr1:52451207:A:G	rs141884437	989486	eQTL	2.80e-02	-0.234	0.106	0.0	0.0368
chr1:50466979:T:C	\N	-994742	eQTL	1.64e-02	-1.2	0.498	0.00105	0.00147

Expression Fold Change in Massively Parallel Reporter Assay (MPRA)

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mpra plot

Variant ID	rs ID	TSS Distance	P-Value	Expression Fold Change	Tier	Cell Type