JOB

AL606517.1(ENSG00000233877)

View on Pheweb.jp , UCSC , GWAS Catalog , GTEx , gnomAD

Statistical fine-mapping results from Japan COVID-19 Task Force

(Shown only for PIP>0.001)

qtl plot

Variant ID	rs ID	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	PIP (SuSiE)	PIP (FINEMAP)	MAF
chr1:64942413:T:C	rs7531799	434	eQTL	2.95e-02	0.0695	0.0319	0.0	0.0	0.457
chr1:64940131:G:C	rs9645414	-1848	eQTL	2.57e-02	-0.078	0.0349	0.0	0.0	0.276
chr1:64939387:A:C	rs1353595	-2592	eQTL	3.17e-02	0.0687	0.032	0.0	0.0	0.457
chr1:64944857:AC:A	rs11288355	2878	eQTL	2.52e-02	-0.0782	0.0349	0.0	0.0	0.275
chr1:64938532:T:C	rs7519042	-3447	eQTL	3.20e-02	-0.0686	0.032	0.0	0.0	0.46
chr1:64945675:AAAC:A	rs147380749	3696	eQTL	2.95e-02	0.0695	0.0319	0.0	0.0	0.456
chr1:64938271:G:A	rs28649699	-3708	eQTL	3.11e-02	0.0688	0.0319	0.0	0.0	0.457
chr1:64938256:G:A	rs28690774	-3723	eQTL	3.11e-02	0.0688	0.0319	0.0	0.0	0.457
chr1:64937942:C:T	rs59653472	-4037	eQTL	2.94e-02	0.0695	0.0319	0.0	0.0	0.457
chr1:64937803:A:T	rs11208551	-4176	eQTL	3.02e-02	-0.0693	0.0319	0.0	0.0	0.461
chr1:64937461:A:G	rs11208550	-4518	eQTL	2.87e-02	-0.0764	0.0349	0.0	0.0	0.274
chr1:64946752:TATTTGCAAACCCATGTTCATAGAA:T	rs35734597	4773	eQTL	3.24e-02	0.0685	0.032	0.0	0.0	0.455
chr1:64936944:T:C	rs10889510	-5035	eQTL	3.21e-02	-0.0686	0.0319	0.0	0.0	0.46
chr1:64947147:G:T	rs11208552	5168	eQTL	2.53e-02	-0.0782	0.0349	0.0	0.0	0.276
chr1:64947257:T:G	\N	5278	eQTL	3.04e-02	-0.0693	0.0319	0.0	0.0	0.46
chr1:64948270:A:G	rs12046291	6291	eQTL	2.64e-02	-0.0776	0.0349	0.0	0.0	0.277
chr1:64935347:T:C	rs11208547	-6632	eQTL	2.57e-02	-0.078	0.0349	0.0	0.0	0.276
chr1:64948783:C:G	rs11208554	6804	eQTL	2.39e-02	-0.0789	0.0349	0.0	0.0	0.276
chr1:64934922:G:T	rs76055700	-7057	eQTL	2.05e-04	0.131	0.035	0.0178	0.0279	0.283
chr1:64934890:T:A	rs188527736	-7089	eQTL	1.10e-02	0.218	0.0854	0.0	0.0	0.0368
chr1:64934889:C:T	rs10889509	-7090	eQTL	3.10e-02	0.0689	0.0319	0.0	0.0	0.457
chr1:64934139:T:TA	rs67874762	-7840	eQTL	3.19e-02	-0.0687	0.032	0.0	0.0	0.46
chr1:64949885:C:G	rs10157929	7906	eQTL	2.85e-02	0.0699	0.0319	0.0	0.0	0.456
chr1:64933761:C:G	\N	-8218	eQTL	3.28e-02	0.605	0.283	0.0	0.0	0.00294
chr1:64933625:T:G	rs6588107	-8354	eQTL	3.20e-02	-0.0686	0.0319	0.0	0.0	0.46
chr1:64933421:C:A	\N	-8558	eQTL	2.70e-02	0.522	0.236	0.0	0.0	0.00442
chr1:64933198:G:T	rs11208545	-8781	eQTL	3.11e-02	0.0688	0.0319	0.0	0.0	0.457
chr1:64951006:A:T	rs76065478	9027	eQTL	9.32e-03	0.22	0.0844	0.0	0.0	0.0378
chr1:64932745:T:A	rs7516978	-9234	eQTL	3.05e-02	-0.0691	0.0319	0.0	0.0	0.456
chr1:64932305:T:C	rs7514369	-9674	eQTL	3.35e-02	-0.0679	0.0319	0.0	0.0	0.456
chr1:64931878:G:C	rs11208544	-10101	eQTL	3.26e-02	-0.0682	0.0318	0.0	0.0	0.456
chr1:64930671:T:C	rs10889508	-11308	eQTL	2.37e-02	-0.079	0.0349	0.0	0.0	0.278
chr1:64930659:AATG:A	rs58918921	-11320	eQTL	2.37e-02	-0.079	0.0349	0.0	0.0	0.278
chr1:64930382:A:G	rs11208542	-11597	eQTL	2.35e-02	-0.0791	0.0349	0.0	0.0	0.278
chr1:64930055:G:A	\N	-11924	eQTL	2.06e-02	0.428	0.184	0.0	0.0	0.00736
chr1:64927850:T:C	rs12745769	-14129	eQTL	2.49e-02	-0.0784	0.0349	0.0	0.0	0.279
chr1:64927222:C:G	rs11208540	-14757	eQTL	3.24e-02	0.0681	0.0318	0.0	0.0	0.454
chr1:64927062:T:C	rs12031995	-14917	eQTL	3.25e-02	0.068	0.0318	0.0	0.0	0.454
chr1:64926857:C:T	rs11208539	-15122	eQTL	2.40e-02	-0.0789	0.0349	0.0	0.0	0.278
chr1:64926570:A:AACG	\N	-15409	eQTL	2.99e-02	0.614	0.282	0.0	0.0	0.00294
chr1:64925122:C:T	rs10889506	-16857	eQTL	3.39e-02	0.0676	0.0318	0.0	0.0	0.454
chr1:64925082:T:C	rs10889505	-16897	eQTL	3.39e-02	0.0676	0.0318	0.0	0.0	0.454
chr1:64924820:G:C	rs10889504	-17159	eQTL	3.39e-02	0.0676	0.0318	0.0	0.0	0.454
chr1:64924152:T:G	rs10889503	-17827	eQTL	2.37e-02	-0.079	0.0349	0.0	0.0	0.278
chr1:64923606:C:G	rs11208538	-18373	eQTL	2.52e-02	-0.0782	0.0349	0.0	0.0	0.279
chr1:64962125:C:T	\N	20146	eQTL	2.97e-02	-0.881	0.405	0.0	0.0	0.00147
chr1:64964244:A:G	rs74889977	22265	eQTL	4.70e-03	0.115	0.0407	0.00155	0.00158	0.182
chr1:64917949:A:T	rs11208537	-24030	eQTL	4.71e-03	0.0907	0.032	0.00161	0.00158	0.465
chr1:64917319:A:C	rs7539178	-24660	eQTL	4.95e-03	0.0901	0.032	0.00155	0.00152	0.465
chr1:64917109:T:G	rs7528403	-24870	eQTL	4.68e-03	-0.0908	0.032	0.00161	0.00158	0.467
chr1:64916563:C:T	rs12037470	-25416	eQTL	1.78e-02	-0.085	0.0358	0.0	0.0	0.27
chr1:64914676:G:A	rs139476107	-27303	eQTL	2.52e-04	0.129	0.0351	0.0155	0.0216	0.282
chr1:64914299:G:C	rs10889502	-27680	eQTL	1.37e-02	0.0801	0.0324	0.0	0.0	0.42
chr1:64972171:C:T	\N	30192	eQTL	1.68e-02	0.677	0.283	0.0	0.0	0.00294
chr1:64911148:T:C	rs12121669	-30831	eQTL	1.27e-03	0.112	0.0348	0.00434	0.00474	0.293
chr1:64977203:G:A	\N	35224	eQTL	2.17e-02	-0.921	0.4	0.0	0.0	0.00147
chr1:64904746:T:TAC	\N	-37233	eQTL	1.19e-02	-0.0796	0.0316	0.0	0.0	0.445
chr1:64903658:T:C	rs74891403	-38321	eQTL	4.57e-03	0.168	0.059	0.00165	0.00163	0.081
chr1:64902716:A:G	rs11576173	-39263	eQTL	1.08e-02	-0.0803	0.0314	0.0	0.0	0.445
chr1:64981344:T:C	rs151025607	39365	eQTL	4.25e-02	-0.161	0.0795	0.0	0.0	0.0427
chr1:64902359:T:C	rs12743599	-39620	eQTL	1.19e-02	-0.0788	0.0312	0.0	0.0	0.447
chr1:64895266:A:T	rs72920202	-46713	eQTL	1.23e-03	0.112	0.0347	0.00446	0.00484	0.292
chr1:64893800:A:T	rs79745672	-48179	eQTL	9.05e-04	0.116	0.0348	0.00568	0.00633	0.291
chr1:64892307:A:G	rs310251	-49672	eQTL	1.48e-02	0.0768	0.0314	0.0	0.0	0.446
chr1:64995609:C:T	\N	53630	eQTL	4.68e-02	0.675	0.339	0.0	0.0	0.00196
chr1:64997289:T:C	\N	55310	eQTL	3.36e-02	0.16	0.0754	0.0	0.0	0.0481
chr1:64884439:A:G	rs310199	-57540	eQTL	1.21e-02	0.0783	0.0311	0.0	0.0	0.445
chr1:64884134:C:G	rs310200	-57845	eQTL	1.53e-02	0.0765	0.0315	0.0	0.0	0.445
chr1:64883925:A:G	rs310201	-58054	eQTL	1.17e-02	0.0794	0.0314	0.0	0.0	0.445
chr1:64883861:A:G	rs310202	-58118	eQTL	1.19e-02	0.0791	0.0314	0.0	0.0	0.446
chr1:64875884:C:T	rs3790541	-66095	eQTL	7.54e-04	0.117	0.0345	0.0066	0.00747	0.292
chr1:64874887:G:A	\N	-67092	eQTL	3.38e-02	0.601	0.283	0.0	0.0	0.00294
chr1:64873549:A:G	rs3818753	-68430	eQTL	4.90e-03	-0.2	0.0708	0.00155	0.00159	0.052
chr1:64873092:C:T	rs17127117	-68887	eQTL	8.94e-04	0.115	0.0344	0.00573	0.00637	0.293
chr1:64873062:C:T	rs55869683	-68917	eQTL	7.94e-04	0.116	0.0344	0.00631	0.00712	0.293
chr1:64870133:G:A	\N	-71846	eQTL	4.47e-02	0.685	0.341	0.0	0.0	0.00196
chr1:64870060:G:A	\N	-71919	eQTL	3.59e-02	0.6	0.285	0.0	0.0	0.00294
chr1:64869660:C:G	rs2274947	-72319	eQTL	8.66e-04	0.115	0.0344	0.00589	0.00656	0.293
chr1:65018093:G:T	\N	76114	eQTL	4.72e-02	0.674	0.339	0.0	0.0	0.00196
chr1:64861225:C:G	rs17127107	-80754	eQTL	9.51e-04	0.114	0.0344	0.00545	0.00602	0.293
chr1:64860694:T:A	rs12406400	-81285	eQTL	9.34e-04	0.114	0.0344	0.00554	0.00612	0.293
chr1:64858703:T:C	\N	-83276	eQTL	4.47e-02	0.685	0.341	0.0	0.0	0.00196
chr1:64857631:G:A	\N	-84348	eQTL	4.47e-02	0.685	0.341	0.0	0.0	0.00196
chr1:64855448:G:A	\N	-86531	eQTL	4.45e-02	0.413	0.205	0.0	0.0	0.00589
chr1:64853404:G:C	rs79479271	-88575	eQTL	4.34e-02	-0.14	0.0691	0.0	0.0	0.055
chr1:64852824:C:T	rs4916008	-89155	eQTL	1.05e-03	0.113	0.0345	0.00503	0.00551	0.293
chr1:64851647:C:G	rs17127090	-90332	eQTL	1.05e-03	0.113	0.0345	0.00506	0.00553	0.293
chr1:65032522:C:A	\N	90543	eQTL	3.78e-02	-0.522	0.251	0.0	0.0	0.00393
chr1:64850676:G:GA	\N	-91303	eQTL	1.88e-03	-1.02	0.327	0.00297	0.00377	0.00245
chr1:64848395:C:T	rs3790535	-93584	eQTL	9.20e-04	0.115	0.0345	0.00558	0.00621	0.292
chr1:64848255:C:CG	\N	-93724	eQTL	2.52e-02	-0.506	0.226	0.0	0.0	0.00589
chr1:65037124:T:C	\N	95145	eQTL	3.40e-03	-1.02	0.347	0.00195	0.0023	0.00196
chr1:64846598:C:T	\N	-95381	eQTL	4.56e-04	-1.56	0.444	0.0125	0.0128	0.00147
chr1:64845579:G:A	rs2230587	-96400	eQTL	1.16e-03	0.113	0.0345	0.00466	0.00506	0.293
chr1:64840399:C:T	\N	-101580	eQTL	4.49e-02	-0.442	0.22	0.0	0.0	0.00491
chr1:64839504:C:T	\N	-102475	eQTL	3.83e-02	-0.655	0.316	0.0	0.0	0.00294
chr1:64837435:T:C	rs4916003	-104544	eQTL	8.82e-04	0.111	0.0334	0.00582	0.00645	0.322
chr1:65047948:A:G	\N	105969	eQTL	2.21e-02	-0.918	0.401	0.0	0.0	0.00147
chr1:64835986:C:A	rs2254002	-105993	eQTL	4.86e-02	0.0635	0.0322	0.0	0.0	0.425
chr1:64835928:T:G	rs2780815	-106051	eQTL	1.39e-02	0.0985	0.04	0.0	0.0	0.197
chr1:64835086:C:CA	rs56114634	-106893	eQTL	5.50e-04	0.116	0.0334	0.00852	0.00992	0.319
chr1:65053148:C:T	rs146157149	111169	eQTL	2.50e-02	0.177	0.0787	0.0	0.0	0.0427
chr1:64830329:G:A	\N	-111650	eQTL	2.23e-02	0.426	0.186	0.0	0.0	0.00736
chr1:65053898:T:C	\N	111919	eQTL	2.12e-02	0.432	0.187	0.0	0.0	0.00736
chr1:65053945:A:C	rs77569221	111966	eQTL	2.66e-02	-0.173	0.0778	0.0	0.0	0.0407
chr1:64829020:T:A	rs914960	-112959	eQTL	2.01e-03	0.101	0.0327	0.0031	0.00314	0.337
chr1:64825145:A:G	rs61784686	-116834	eQTL	1.67e-03	0.108	0.0344	0.00346	0.00366	0.3
chr1:64822035:C:T	\N	-119944	eQTL	4.82e-02	1.23	0.623	0.0	0.0	0.00147
chr1:65063953:G:A	\N	121974	eQTL	1.67e-02	0.679	0.283	0.0	0.0	0.00294
chr1:64818736:C:T	rs75084496	-123243	eQTL	2.29e-03	0.105	0.0343	0.00271	0.00282	0.3
chr1:64817389:C:T	rs76864439	-124590	eQTL	1.66e-03	0.108	0.0344	0.00348	0.00368	0.299
chr1:64816892:A:G	\N	-125087	eQTL	1.67e-02	0.678	0.283	0.0	0.0	0.00294
chr1:64812483:T:C	\N	-129496	eQTL	1.29e-02	-0.47	0.189	0.0	0.0	0.00687
chr1:64811809:G:T	\N	-130170	eQTL	1.65e-02	0.679	0.283	0.0	0.0	0.00294
chr1:64809388:G:A	rs2765873	-132591	eQTL	4.06e-02	0.0655	0.032	0.0	0.0	0.449
chr1:64807647:TA:T	rs5774720	-134332	eQTL	4.09e-02	0.0655	0.032	0.0	0.0	0.449
chr1:64804304:C:A	rs310240	-137675	eQTL	4.06e-02	0.0655	0.032	0.0	0.0	0.449
chr1:64804029:C:T	rs72918100	-137950	eQTL	2.20e-03	0.107	0.0347	0.00279	0.0029	0.298
chr1:64802790:C:G	\N	-139189	eQTL	3.72e-02	0.722	0.346	0.0	0.0	0.00196
chr1:64802155:C:T	rs193084222	-139824	eQTL	4.32e-02	-0.351	0.173	0.0	0.0	0.0108
chr1:64801342:G:A	\N	-140637	eQTL	4.27e-02	-0.457	0.225	0.0	0.0	0.00491
chr1:64801053:T:C	\N	-140926	eQTL	4.56e-04	-1.56	0.444	0.0125	0.0128	0.00147
chr1:64800239:C:T	\N	-141740	eQTL	3.90e-04	-0.997	0.28	0.0109	0.0154	0.00343
chr1:64799381:T:C	rs2478155	-142598	eQTL	4.09e-02	0.0654	0.0319	0.0	0.0	0.449
chr1:64797853:A:G	\N	-144126	eQTL	1.46e-02	0.39	0.159	0.0	0.0	0.0123
chr1:64790397:A:G	\N	-151582	eQTL	8.44e-03	0.928	0.352	0.0	0.00116	0.00196
chr1:64789335:G:A	rs2500232	-152644	eQTL	4.06e-02	0.0655	0.032	0.0	0.0	0.449
chr1:64788849:G:A	rs3002681	-153130	eQTL	4.04e-02	0.0656	0.032	0.0	0.0	0.449
chr1:64785299:T:G	rs2483616	-156680	eQTL	4.05e-02	0.0656	0.032	0.0	0.0	0.449
chr1:64783799:G:A	rs7540450	-158180	eQTL	3.92e-03	0.101	0.0348	0.00179	0.00181	0.292
chr1:64782893:G:C	rs2483615	-159086	eQTL	4.05e-02	0.0656	0.032	0.0	0.0	0.449
chr1:64781711:T:C	rs2478151	-160268	eQTL	2.51e-03	0.105	0.0348	0.00251	0.0026	0.299
chr1:64780096:G:C	\N	-161883	eQTL	2.29e-02	0.938	0.412	0.0	0.0	0.00147
chr1:64779389:AT:A	\N	-162590	eQTL	1.80e-03	0.108	0.0346	0.0033	0.00344	0.303
chr1:64777175:C:A	rs2478150	-164804	eQTL	4.00e-02	0.0657	0.0319	0.0	0.0	0.449
chr1:64775351:C:T	rs75363075	-166628	eQTL	2.49e-03	0.105	0.0347	0.00253	0.00262	0.298
chr1:64771885:G:GGTTA	rs34297554	-170094	eQTL	4.02e-02	0.0656	0.0319	0.0	0.0	0.449
chr1:64771490:C:T	\N	-170489	eQTL	5.12e-04	-0.54	0.155	0.00805	0.0112	0.00981
chr1:64770894:A:C	\N	-171085	eQTL	2.63e-02	-0.921	0.414	0.0	0.0	0.00147
chr1:64769852:A:G	rs2500234	-172127	eQTL	4.51e-02	0.0642	0.032	0.0	0.0	0.449
chr1:65114510:C:T	\N	172531	eQTL	1.40e-02	0.416	0.169	0.0	0.0	0.00883
chr1:64763134:T:C	rs12143618	-178845	eQTL	9.97e-03	0.093	0.036	0.0	0.0	0.264
chr1:64762424:T:C	rs12143404	-179555	eQTL	1.48e-02	0.0897	0.0367	0.0	0.0	0.25
chr1:65122945:G:C	\N	180966	eQTL	4.46e-02	0.444	0.221	0.0	0.0	0.00491
chr1:64757943:C:T	rs56958645	-184036	eQTL	1.62e-02	0.0883	0.0366	0.0	0.0	0.251
chr1:64757779:GCA:G	\N	-184200	eQTL	2.68e-02	-0.627	0.283	0.0	0.0	0.00393
chr1:64756159:G:A	rs6676160	-185820	eQTL	1.65e-02	0.0879	0.0366	0.0	0.0	0.251
chr1:64752025:G:A	\N	-189954	eQTL	1.74e-02	-0.714	0.3	0.0	0.0	0.00294
chr1:65136223:A:G	\N	194244	eQTL	3.72e-02	-0.437	0.209	0.0	0.0	0.00589
chr1:64746414:T:C	\N	-195565	eQTL	4.89e-02	0.867	0.44	0.0	0.0	0.00147
chr1:64744556:C:G	rs57610965	-197423	eQTL	1.52e-02	0.0893	0.0367	0.0	0.0	0.25
chr1:64743994:A:T	rs74461019	-197985	eQTL	1.63e-02	0.0882	0.0366	0.0	0.0	0.251
chr1:64742689:A:T	rs17097146	-199290	eQTL	1.53e-02	0.0892	0.0367	0.0	0.0	0.25
chr1:64741221:C:A	rs72918040	-200758	eQTL	1.63e-02	0.0885	0.0368	0.0	0.0	0.25
chr1:64740830:C:T	rs112644616	-201149	eQTL	1.81e-02	0.0873	0.0369	0.0	0.0	0.25
chr1:64737080:TAA:T	\N	-204899	eQTL	7.97e-03	0.941	0.354	0.00101	0.00122	0.00196
chr1:64734882:C:T	rs7354831	-207097	eQTL	3.69e-02	0.067	0.0321	0.0	0.0	0.448
chr1:64734239:A:G	rs6679426	-207740	eQTL	1.43e-02	0.0905	0.0369	0.0	0.0	0.251
chr1:64728989:A:G	rs11208517	-212990	eQTL	1.60e-02	0.089	0.0369	0.0	0.0	0.251
chr1:64728959:G:C	\N	-213020	eQTL	4.19e-03	-0.842	0.293	0.00166	0.0019	0.00294
chr1:64727780:C:T	rs1926311	-214199	eQTL	3.17e-02	0.0691	0.0321	0.0	0.0	0.447
chr1:64726504:T:C	rs12073135	-215475	eQTL	1.61e-02	0.089	0.0369	0.0	0.0	0.251
chr1:65158795:C:T	\N	216816	eQTL	6.25e-03	-1.17	0.428	0.00174	0.0015	0.00147
chr1:64725030:T:C	rs10493365	-216949	eQTL	3.04e-02	0.08	0.0369	0.0	0.0	0.251
chr1:64724665:G:T	rs1887050	-217314	eQTL	2.47e-02	0.0832	0.037	0.0	0.0	0.25
chr1:64724571:A:T	rs1887049	-217408	eQTL	2.47e-02	0.0832	0.037	0.0	0.0	0.25
chr1:65159477:C:T	\N	217498	eQTL	4.86e-02	0.541	0.274	0.0	0.0	0.00294
chr1:64724068:C:T	rs3920616	-217911	eQTL	3.88e-02	0.0666	0.0322	0.0	0.0	0.45
chr1:64723921:A:G	rs10493364	-218058	eQTL	2.50e-02	0.0828	0.0369	0.0	0.0	0.252
chr1:64723894:T:C	rs11208516	-218085	eQTL	2.20e-02	0.0845	0.0369	0.0	0.0	0.252
chr1:64722815:G:C	rs1926310	-219164	eQTL	2.42e-02	0.0832	0.0369	0.0	0.0	0.252
chr1:65161391:C:T	\N	219412	eQTL	2.78e-03	-0.587	0.196	0.00245	0.0028	0.00687
chr1:64721313:A:C	\N	-220666	eQTL	4.84e-02	0.867	0.438	0.0	0.0	0.00147
chr1:64721046:A:G	\N	-220933	eQTL	2.31e-02	0.388	0.171	0.0	0.0	0.00932
chr1:64720639:G:A	\N	-221340	eQTL	3.25e-02	0.34	0.159	0.0	0.0	0.0108
chr1:64716895:C:T	\N	-225084	eQTL	2.59e-02	-0.635	0.285	0.0	0.0	0.00294
chr1:65168346:A:T	\N	226367	eQTL	3.23e-02	-0.546	0.255	0.0	0.0	0.00393
chr1:65171810:A:G	\N	229831	eQTL	4.86e-02	0.541	0.274	0.0	0.0	0.00294
chr1:64709774:T:C	\N	-232205	eQTL	1.89e-02	-0.749	0.318	0.0	0.0	0.00294
chr1:65177531:G:A	\N	235552	eQTL	3.56e-02	0.582	0.277	0.0	0.0	0.00343
chr1:65178727:C:A	\N	236748	eQTL	5.17e-04	-1.54	0.443	0.0113	0.0114	0.00147
chr1:65181457:C:T	\N	239478	eQTL	6.96e-03	-0.898	0.332	0.00121	0.00124	0.00245
chr1:65185648:G:A	rs12563581	243669	eQTL	4.55e-02	0.0851	0.0425	0.0	0.0	0.186
chr1:64690812:G:A	rs17126887	-251167	eQTL	1.52e-02	-0.126	0.0519	0.0	0.0	0.109
chr1:64690611:C:T	rs12066810	-251368	eQTL	2.66e-02	-0.116	0.0523	0.0	0.0	0.108
chr1:64689632:C:T	rs17126884	-252347	eQTL	4.00e-02	-0.107	0.0523	0.0	0.0	0.109
chr1:64689220:T:C	\N	-252759	eQTL	1.16e-02	-0.4	0.158	0.0	0.0	0.0103
chr1:64689117:CAT:C	rs61230054	-252862	eQTL	2.59e-02	-0.117	0.0524	0.0	0.0	0.108
chr1:64688912:T:G	rs12089806	-253067	eQTL	2.66e-02	-0.116	0.0523	0.0	0.0	0.108
chr1:64687702:AG:A	\N	-254277	eQTL	7.64e-03	-1.22	0.455	0.00113	0.0012	0.00147
chr1:65201613:C:G	\N	259634	eQTL	5.53e-04	-1.54	0.444	0.0107	0.0107	0.00147
chr1:64681319:C:T	\N	-260660	eQTL	1.29e-03	0.144	0.0445	0.0042	0.00526	0.144
chr1:65203276:T:C	rs77369072	261297	eQTL	4.91e-02	0.113	0.0575	0.0	0.0	0.0775
chr1:65206471:G:A	rs35211864	264492	eQTL	4.85e-02	0.114	0.0577	0.0	0.0	0.0775
chr1:65208207:C:G	\N	266228	eQTL	5.82e-03	-0.614	0.222	0.00137	0.00149	0.0054
chr1:65208629:A:G	rs75208788	266650	eQTL	4.85e-02	0.114	0.0577	0.0	0.0	0.0775
chr1:65211255:GA:G	rs200024945	269276	eQTL	4.69e-02	0.115	0.0577	0.0	0.0	0.0775
chr1:64670517:C:T	rs77086586	-271462	eQTL	3.33e-03	0.128	0.0436	0.00197	0.00233	0.149
chr1:65214242:C:T	rs113749600	272263	eQTL	4.26e-02	0.123	0.0606	0.0	0.0	0.0736
chr1:64669081:GATTAA:G	rs138956188	-272898	eQTL	1.07e-03	0.146	0.0444	0.00472	0.00613	0.141
chr1:64667776:T:G	\N	-274203	eQTL	7.80e-03	0.736	0.276	0.00107	0.00121	0.00393
chr1:64665048:A:G	\N	-276931	eQTL	1.84e-03	0.139	0.0444	0.0031	0.00381	0.141
chr1:64662568:C:T	\N	-279411	eQTL	4.94e-02	-0.317	0.161	0.0	0.0	0.00981
chr1:64662221:A:T	\N	-279758	eQTL	1.24e-03	0.144	0.0443	0.0042	0.00537	0.142
chr1:64655340:G:A	\N	-286639	eQTL	2.67e-03	0.133	0.0443	0.00233	0.00277	0.141
chr1:64652931:C:T	\N	-289048	eQTL	2.08e-02	-0.643	0.278	0.0	0.0	0.00294
chr1:64652079:A:G	\N	-289900	eQTL	2.41e-03	0.135	0.0444	0.00253	0.00303	0.142
chr1:65235350:A:G	\N	293371	eQTL	8.13e-03	-1.16	0.436	0.0	0.00118	0.00147
chr1:65236981:G:T	\N	295002	eQTL	2.55e-02	-0.347	0.155	0.0	0.0	0.0118
chr1:65237909:T:G	\N	295930	eQTL	3.51e-02	-0.578	0.274	0.0	0.0	0.00343
chr1:64645627:G:A	\N	-296352	eQTL	2.17e-02	-0.639	0.278	0.0	0.0	0.00294
chr1:64643653:G:A	\N	-298326	eQTL	2.38e-02	0.1	0.0444	0.0	0.0	0.143
chr1:64643611:C:T	\N	-298368	eQTL	3.95e-02	0.0891	0.0432	0.0	0.0	0.157
chr1:64643593:T:C	\N	-298386	eQTL	3.87e-02	0.0893	0.0431	0.0	0.0	0.158
chr1:64643590:A:C	\N	-298389	eQTL	4.68e-02	0.0861	0.0432	0.0	0.0	0.157
chr1:64643260:C:A	\N	-298719	eQTL	2.38e-02	-0.632	0.279	0.0	0.0	0.00294
chr1:64639047:C:T	\N	-302932	eQTL	3.51e-02	0.652	0.309	0.0	0.0	0.00393
chr1:65249854:G:A	rs528117716	307875	eQTL	2.78e-02	-0.249	0.113	0.0	0.0	0.0182
chr1:65259314:A:G	\N	317335	eQTL	2.51e-02	0.569	0.254	0.0	0.0	0.00393
chr1:65260042:G:A	\N	318063	eQTL	2.43e-03	-0.382	0.126	0.00281	0.00306	0.0172
chr1:64623564:T:A	rs140151446	-318415	eQTL	2.10e-02	-0.27	0.117	0.0	0.0	0.0206
chr1:64622884:CAT:C	\N	-319095	eQTL	4.64e-02	-0.46	0.231	0.0	0.0	0.0054
chr1:64616800:T:A	rs12758376	-325179	eQTL	4.26e-02	0.154	0.0759	0.0	0.0	0.0442
chr1:64615478:T:C	rs138698520	-326501	eQTL	1.79e-02	-0.274	0.116	0.0	0.0	0.0206
chr1:64614350:T:C	\N	-327629	eQTL	3.69e-02	0.157	0.0753	0.0	0.0	0.0451
chr1:64613868:A:G	rs17126766	-328111	eQTL	3.70e-02	0.157	0.0751	0.0	0.0	0.0451
chr1:64612275:G:GT	\N	-329704	eQTL	3.05e-02	0.427	0.197	0.0	0.0	0.00638
chr1:64611268:C:T	rs2118104	-330711	eQTL	3.52e-02	0.159	0.0756	0.0	0.0	0.0447
chr1:64606573:G:T	rs33984037	-335406	eQTL	3.67e-02	0.158	0.0753	0.0	0.0	0.0451
chr1:64603502:T:C	rs12754428	-338477	eQTL	3.70e-02	0.157	0.0751	0.0	0.0	0.0451
chr1:65281989:C:T	\N	340010	eQTL	1.74e-03	-0.73	0.233	0.00322	0.00393	0.00491
chr1:65282895:T:C	\N	340916	eQTL	3.04e-02	-0.383	0.177	0.0	0.0	0.00834
chr1:64592164:G:A	rs12402220	-349815	eQTL	3.78e-02	0.157	0.0754	0.0	0.0	0.0451
chr1:64592084:A:G	rs12404718	-349895	eQTL	3.78e-02	0.157	0.0754	0.0	0.0	0.0451
chr1:64587698:GT:G	\N	-354281	eQTL	3.65e-02	-0.428	0.204	0.0	0.0	0.00687
chr1:64587233:A:G	rs12404835	-354746	eQTL	3.79e-02	0.157	0.0754	0.0	0.0	0.0451
chr1:64580704:C:A	\N	-361275	eQTL	3.41e-02	0.52	0.245	0.0	0.0	0.00491
chr1:65313333:C:T	\N	371354	eQTL	4.08e-04	-1.71	0.483	0.0139	0.0142	0.00147
chr1:65313829:A:G	\N	371850	eQTL	4.68e-02	-0.692	0.348	0.0	0.0	0.00196
chr1:65317189:T:C	rs544365039	375210	eQTL	3.66e-02	-0.236	0.113	0.0	0.0	0.0182
chr1:65320659:G:A	\N	378680	eQTL	2.54e-02	-0.397	0.178	0.0	0.0	0.00834
chr1:65321829:C:T	\N	379850	eQTL	3.08e-02	0.581	0.269	0.0	0.0	0.00393
chr1:65326139:C:T	\N	384160	eQTL	2.54e-02	-0.397	0.178	0.0	0.0	0.00834
chr1:65329065:G:A	\N	387086	eQTL	3.08e-02	0.581	0.269	0.0	0.0	0.00393
chr1:64554890:C:G	\N	-387089	eQTL	2.63e-03	-0.782	0.259	0.00244	0.00278	0.00393
chr1:65341509:T:C	\N	399530	eQTL	2.86e-02	-0.389	0.177	0.0	0.0	0.00834
chr1:65344485:T:C	rs575373781	402506	eQTL	3.71e-02	-0.235	0.112	0.0	0.0	0.0182
chr1:64539053:T:A	\N	-402926	eQTL	2.23e-02	0.591	0.258	0.0	0.0	0.00393
chr1:64527513:G:A	\N	-414466	eQTL	4.98e-02	0.734	0.374	0.0	0.0	0.00196
chr1:64519598:C:A	\N	-422381	eQTL	1.55e-02	-0.656	0.271	0.0	0.0	0.00393
chr1:65365814:G:A	\N	423835	eQTL	5.90e-03	-0.433	0.157	0.00137	0.0015	0.0108
chr1:65377021:C:T	rs11806845	435042	eQTL	4.21e-02	-0.221	0.108	0.0	0.0	0.0216
chr1:65377780:A:G	\N	435801	eQTL	8.51e-04	0.607	0.181	0.00541	0.00737	0.00785
chr1:64497968:A:G	\N	-444011	eQTL	4.12e-02	0.827	0.404	0.0	0.0	0.00147
chr1:64496671:A:G	\N	-445308	eQTL	2.48e-02	1.04	0.462	0.0	0.0	0.00147
chr1:64491557:G:A	\N	-450422	eQTL	4.47e-02	-0.303	0.151	0.0	0.0	0.0103
chr1:65393729:G:A	\N	451750	eQTL	2.53e-02	0.654	0.292	0.0	0.0	0.00294
chr1:65409914:G:A	\N	467935	eQTL	4.99e-02	0.857	0.436	0.0	0.0	0.00147
chr1:64468493:G:C	\N	-473486	eQTL	4.23e-02	-0.424	0.208	0.0	0.0	0.00589
chr1:64467417:A:AG	\N	-474562	eQTL	3.90e-02	-0.583	0.282	0.0	0.0	0.00294
chr1:65434976:C:T	rs145446742	492997	eQTL	3.22e-02	-0.306	0.143	0.0	0.0	0.0118
chr1:65437547:T:C	rs117605302	495568	eQTL	2.87e-02	-0.157	0.0718	0.0	0.0	0.0594
chr1:65439631:A:G	\N	497652	eQTL	1.95e-02	0.573	0.245	0.0	0.0	0.00442
chr1:65456024:G:A	\N	514045	eQTL	3.36e-02	-0.699	0.329	0.0	0.0	0.00294
chr1:64425638:C:CA	\N	-516341	eQTL	4.10e-02	0.771	0.377	0.0	0.0	0.00196
chr1:65461640:AT:A	rs199524635	519661	eQTL	3.32e-02	-0.307	0.144	0.0	0.0	0.0118
chr1:64416463:T:C	\N	-525516	eQTL	1.49e-03	-1.03	0.323	0.00386	0.00468	0.00343
chr1:64412447:G:A	\N	-529532	eQTL	1.19e-02	-1.1	0.438	0.0	0.0	0.00147
chr1:65475483:C:T	rs115874638	533504	eQTL	3.31e-02	-0.307	0.144	0.0	0.0	0.0118
chr1:65481252:C:T	rs75414713	539273	eQTL	3.31e-02	-0.307	0.144	0.0	0.0	0.0118
chr1:64400166:C:T	\N	-541813	eQTL	4.41e-02	-0.426	0.211	0.0	0.0	0.00638
chr1:64399082:T:A	\N	-542897	eQTL	1.73e-02	0.52	0.218	0.0	0.0	0.0054
chr1:65489651:G:T	rs118124796	547672	eQTL	3.68e-02	-0.272	0.13	0.0	0.0	0.0132
chr1:65497333:C:T	rs6694528	555354	eQTL	4.68e-02	0.184	0.0926	0.0	0.0	0.0294
chr1:65502694:G:T	\N	560715	eQTL	4.58e-02	-0.715	0.358	0.0	0.0	0.00196
chr1:64378823:C:T	\N	-563156	eQTL	1.55e-03	-1.13	0.358	0.00367	0.00461	0.00196
chr1:64374174:C:T	\N	-567805	eQTL	4.07e-02	-0.436	0.213	0.0	0.0	0.0054
chr1:65511039:T:C	rs77411387	569060	eQTL	2.74e-02	-0.312	0.141	0.0	0.0	0.0123
chr1:65521440:A:C	rs74495483	579461	eQTL	2.56e-02	-0.316	0.142	0.0	0.0	0.0123
chr1:65524385:A:G	\N	582406	eQTL	2.10e-02	-0.94	0.407	0.0	0.0	0.00147
chr1:65527916:C:T	rs76500887	585937	eQTL	2.70e-02	-0.313	0.141	0.0	0.0	0.0123
chr1:64354107:G:C	\N	-587872	eQTL	4.70e-02	0.755	0.379	0.0	0.0	0.00196
chr1:64350070:G:A	\N	-591909	eQTL	4.74e-02	0.479	0.241	0.0	0.0	0.00442
chr1:64338564:T:C	\N	-603415	eQTL	1.60e-02	-0.831	0.344	0.0	0.0	0.00196
chr1:65548295:G:T	\N	606316	eQTL	2.24e-02	-0.718	0.314	0.0	0.0	0.00245
chr1:65569575:G:C	rs6671498	627596	eQTL	1.83e-02	-0.223	0.0942	0.0	0.0	0.029
chr1:65577881:G:A	rs9659701	635902	eQTL	1.83e-02	-0.223	0.0942	0.0	0.0	0.029
chr1:65588108:A:G	rs10789188	646129	eQTL	1.70e-02	-0.224	0.0938	0.0	0.0	0.029
chr1:65609711:C:A	\N	667732	eQTL	3.35e-02	-0.571	0.268	0.0	0.0	0.00393
chr1:64273026:G:GCA	\N	-668953	eQTL	4.62e-02	0.757	0.379	0.0	0.0	0.00196
chr1:65619031:A:G	\N	677052	eQTL	3.07e-02	0.599	0.277	0.0	0.0	0.00343
chr1:64250261:G:GC	\N	-691718	eQTL	2.38e-02	-0.558	0.246	0.0	0.0	0.00442
chr1:65644743:G:C	\N	702764	eQTL	3.92e-02	-1.13	0.547	0.0	0.0	0.00147
chr1:65644916:C:T	\N	702937	eQTL	3.47e-02	0.588	0.278	0.0	0.0	0.00294
chr1:65654586:A:T	\N	712607	eQTL	5.08e-03	-1.11	0.396	0.00137	0.00157	0.00196
chr1:65657308:T:G	\N	715329	eQTL	4.10e-02	0.362	0.177	0.0	0.0	0.00785
chr1:65657541:C:T	\N	715562	eQTL	8.85e-03	-0.777	0.296	0.0	0.00111	0.00294
chr1:64199556:T:C	\N	-742423	eQTL	2.30e-02	0.54	0.237	0.0	0.0	0.00442
chr1:65690699:A:G	rs76623078	748720	eQTL	2.75e-02	-0.294	0.133	0.0	0.0	0.0137
chr1:64188959:C:T	\N	-753020	eQTL	4.79e-02	0.71	0.359	0.0	0.0	0.00196
chr1:64187976:C:T	\N	-754003	eQTL	9.10e-03	-0.871	0.333	0.0	0.00105	0.00245
chr1:64182721:A:T	\N	-759258	eQTL	1.63e-02	0.746	0.31	0.0	0.0	0.00245
chr1:64175018:A:T	\N	-766961	eQTL	4.37e-02	-0.297	0.147	0.0	0.0	0.0123
chr1:65711520:C:G	\N	769541	eQTL	2.17e-02	-0.932	0.405	0.0	0.0	0.00147
chr1:65713676:C:T	rs181167238	771697	eQTL	1.71e-02	-0.302	0.127	0.0	0.0	0.0167
chr1:64166515:G:T	\N	-775464	eQTL	1.77e-02	0.825	0.347	0.0	0.0	0.00196
chr1:64158302:A:C	\N	-783677	eQTL	1.21e-02	0.807	0.321	0.0	0.0	0.00245
chr1:65728239:C:G	\N	786260	eQTL	2.11e-02	0.795	0.344	0.0	0.0	0.00196
chr1:64154094:G:A	\N	-787885	eQTL	6.42e-03	-0.629	0.23	0.00123	0.00138	0.0054
chr1:65739403:A:G	\N	797424	eQTL	2.40e-02	0.946	0.419	0.0	0.0	0.00196
chr1:65741894:A:G	\N	799915	eQTL	3.06e-02	-0.746	0.344	0.0	0.0	0.00196
chr1:64137327:T:C	\N	-804652	eQTL	3.17e-02	-0.566	0.263	0.0	0.0	0.00245
chr1:64131866:CA:C	rs35533587	-810113	eQTL	2.58e-02	0.116	0.0521	0.0	0.0	0.105
chr1:64131829:G:A	rs12732339	-810150	eQTL	1.87e-02	0.123	0.052	0.0	0.0	0.104
chr1:64124614:T:C	rs12127830	-817365	eQTL	3.68e-02	0.109	0.0523	0.0	0.0	0.102
chr1:64120426:G:T	rs6683204	-821553	eQTL	4.87e-02	-0.129	0.0656	0.0	0.0	0.0589
chr1:64120291:C:T	rs2762851	-821688	eQTL	4.81e-02	0.129	0.0653	0.0	0.0	0.0589
chr1:64120119:A:G	rs11805916	-821860	eQTL	4.87e-02	-0.129	0.0656	0.0	0.0	0.0589
chr1:64119981:T:C	rs11804422	-821998	eQTL	4.81e-02	-0.129	0.0653	0.0	0.0	0.0589
chr1:64119906:G:A	rs57223698	-822073	eQTL	4.87e-02	-0.129	0.0656	0.0	0.0	0.0589
chr1:64119516:G:A	rs4915945	-822463	eQTL	4.87e-02	-0.129	0.0656	0.0	0.0	0.0589
chr1:64119442:T:C	rs4915944	-822537	eQTL	4.87e-02	-0.129	0.0656	0.0	0.0	0.0589
chr1:64119128:A:T	rs11805426	-822851	eQTL	4.86e-02	-0.129	0.0656	0.0	0.0	0.0589
chr1:64119020:G:A	rs4915943	-822959	eQTL	4.87e-02	-0.129	0.0656	0.0	0.0	0.0589
chr1:64117885:C:CTA	rs3084941	-824094	eQTL	4.87e-02	-0.129	0.0656	0.0	0.0	0.0589
chr1:64117540:C:A	rs11808138	-824439	eQTL	4.87e-02	-0.129	0.0656	0.0	0.0	0.0589
chr1:64117300:T:G	rs6683013	-824679	eQTL	4.87e-02	-0.129	0.0656	0.0	0.0	0.0589
chr1:64112531:G:T	rs12116855	-829448	eQTL	2.05e-02	0.123	0.0528	0.0	0.0	0.101
chr1:65776251:AT:A	\N	834272	eQTL	2.12e-02	0.794	0.344	0.0	0.0	0.00196
chr1:65790787:C:T	\N	848808	eQTL	4.55e-02	-0.388	0.194	0.0	0.0	0.00638
chr1:64089066:G:T	rs77306313	-852913	eQTL	2.98e-02	-0.0965	0.0443	0.0	0.0	0.139
chr1:64087044:C:T	\N	-854935	eQTL	5.42e-03	0.985	0.353	0.00137	0.00161	0.00196
chr1:64082430:A:C	\N	-859549	eQTL	4.02e-02	0.297	0.144	0.0	0.0	0.0128
chr1:65802800:A:G	\N	860821	eQTL	1.42e-03	-1.14	0.355	0.00467	0.00464	0.00196
chr1:65812517:A:G	\N	870538	eQTL	2.72e-02	0.893	0.404	0.0	0.0	0.00147
chr1:64064014:A:T	rs834340	-877965	eQTL	1.53e-02	-0.112	0.0462	0.0	0.0	0.147
chr1:64058820:G:C	\N	-883159	eQTL	6.09e-03	0.978	0.356	0.00126	0.00148	0.00196
chr1:65827061:AT:A	\N	885082	eQTL	1.52e-02	-0.36	0.148	0.0	0.0	0.0113
chr1:65827065:ACTGCGTGT:A	\N	885086	eQTL	1.52e-02	-0.36	0.148	0.0	0.0	0.0113
chr1:65840196:C:T	\N	898217	eQTL	2.62e-02	0.585	0.263	0.0	0.0	0.00343
chr1:65845702:T:C	\N	903723	eQTL	1.95e-02	0.569	0.243	0.0	0.0	0.00393
chr1:64036935:C:G	\N	-905044	eQTL	1.46e-02	-0.479	0.196	0.0	0.0	0.00687
chr1:65848639:A:G	\N	906660	eQTL	3.46e-02	-0.646	0.305	0.0	0.0	0.00245
chr1:65854209:T:A	\N	912230	eQTL	3.56e-03	-0.578	0.198	0.00185	0.00215	0.00589
chr1:65858582:G:A	\N	916603	eQTL	1.95e-02	0.569	0.243	0.0	0.0	0.00393
chr1:64013805:G:A	\N	-928174	eQTL	3.99e-02	-0.881	0.428	0.0	0.0	0.00147
chr1:64013224:G:A	\N	-928755	eQTL	3.83e-02	0.93	0.448	0.0	0.0	0.00147
chr1:64008396:G:A	rs60726172	-933583	eQTL	3.86e-02	-0.272	0.131	0.0	0.0	0.0177
chr1:65876082:G:A	\N	934103	eQTL	2.58e-03	-1.06	0.35	0.00265	0.00309	0.00196
chr1:64002905:C:T	\N	-939074	eQTL	1.29e-02	0.879	0.353	0.0	0.0	0.00196
chr1:65886877:T:C	\N	944898	eQTL	1.94e-02	-1.01	0.432	0.0	0.0	0.00147
chr1:65899991:A:G	\N	958012	eQTL	4.23e-02	0.993	0.488	0.0	0.0	0.00147
chr1:63977156:G:A	\N	-964823	eQTL	3.89e-02	0.936	0.453	0.0	0.0	0.00147
chr1:65915523:GT:G	\N	973544	eQTL	2.26e-03	-1.07	0.35	0.00295	0.00345	0.00196
chr1:63954934:C:T	\N	-987045	eQTL	1.36e-02	0.656	0.265	0.0	0.0	0.00343
chr1:65937886:A:G	\N	995907	eQTL	2.51e-02	0.478	0.213	0.0	0.0	0.0054

Expression Fold Change in Massively Parallel Reporter Assay (MPRA)

[Click here to download the full results]

mpra plot

Variant ID	rs ID	TSS Distance	P-Value	Expression Fold Change	Tier	Cell Type
chr1:65489651:G:T	rs118124796	547672	0.109	0.212	None	K562
chr1:65489651:G:T	rs118124796	547672	0.414	-0.114	None	HepG2
chr1:65511039:T:C	rs77411387	569060	0.413	-0.18	None	K562
chr1:65511039:T:C	rs77411387	569060	0.974	-0.00637	None	HepG2
chr1:65527916:C:T	rs76500887	585937	0.482	-0.149	None	K562
chr1:65527916:C:T	rs76500887	585937	0.577	-0.129	None	HepG2