JOB

TSPAN1(ENSG00000117472)

View on Pheweb.jp , UCSC , GWAS Catalog , GTEx , gnomAD

Statistical fine-mapping results from Japan COVID-19 Task Force

(Shown only for PIP>0.001)

qtl plot

Variant ID	rs ID	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	PIP (FINEMAP)	MAF
chr1:46175207:C:T	\N	134	pQTL	4.76e-02	0.505	0.255	0.0	0.00253
chr1:46152050:G:A	\N	-23023	pQTL	3.33e-04	1.46	0.406	0.0165	0.00108
chr1:46149295:G:T	\N	-25778	pQTL	6.21e-03	-1.34	0.49	0.0013	0.00108
chr1:46206550:C:A	\N	31477	pQTL	3.64e-02	-0.457	0.218	0.0	0.00361
chr1:46142692:C:T	\N	-32381	pQTL	4.16e-02	-0.421	0.206	0.0	0.00397
chr1:46210737:G:A	\N	35664	pQTL	1.05e-02	-0.86	0.336	0.0	0.00145
chr1:46214953:G:C	\N	39880	pQTL	3.67e-02	-0.456	0.218	0.0	0.00361
chr1:46216250:G:A	\N	41177	pQTL	3.67e-02	-0.456	0.218	0.0	0.00361
chr1:46222784:T:A	\N	47711	pQTL	3.67e-02	-0.456	0.218	0.0	0.00361
chr1:46223258:A:G	\N	48185	pQTL	3.67e-02	-0.456	0.218	0.0	0.00361
chr1:46108956:G:A	rs12037370	-66117	pQTL	8.10e-03	0.17	0.0643	0.00105	0.0444
chr1:46251634:T:C	\N	76561	pQTL	4.72e-02	0.98	0.494	0.0	0.00108
chr1:46097339:T:C	\N	-77734	pQTL	3.24e-03	-1.4	0.474	0.00216	0.00108
chr1:46256741:T:G	\N	81668	pQTL	3.11e-02	-0.668	0.309	0.0	0.00181
chr1:46090971:T:C	\N	-84102	pQTL	2.33e-02	-0.385	0.17	0.0	0.00578
chr1:46089453:C:T	\N	-85620	pQTL	2.51e-02	0.449	0.2	0.0	0.00397
chr1:46083491:A:C	rs12047726	-91582	pQTL	9.59e-03	0.164	0.0633	0.0	0.0459
chr1:46073564:G:C	\N	-101509	pQTL	2.51e-02	0.449	0.2	0.0	0.00397
chr1:46282823:G:A	\N	107750	pQTL	1.23e-02	-0.842	0.336	0.0	0.00145
chr1:46284446:T:C	\N	109373	pQTL	3.78e-03	-0.794	0.274	0.00192	0.00217
chr1:46059408:C:T	\N	-115665	pQTL	2.33e-02	-0.385	0.17	0.0	0.00578
chr1:46293632:C:T	\N	118559	pQTL	4.67e-02	-0.331	0.166	0.0	0.0065
chr1:46307234:G:A	rs150469757	132161	pQTL	3.26e-02	-0.112	0.0522	0.0	0.069
chr1:46040463:A:G	\N	-134610	pQTL	2.40e-02	0.452	0.2	0.0	0.00397
chr1:46309703:C:T	\N	134630	pQTL	1.40e-02	-0.685	0.278	0.0	0.00217
chr1:46039679:G:A	\N	-135394	pQTL	2.40e-02	0.452	0.2	0.0	0.00397
chr1:46313798:GC:G	\N	138725	pQTL	1.50e-02	-0.629	0.258	0.0	0.00253
chr1:46029964:C:T	\N	-145109	pQTL	4.41e-02	-0.736	0.365	0.0	0.00145
chr1:46332727:T:A	\N	157654	pQTL	2.81e-02	0.266	0.121	0.0	0.0108
chr1:46016074:C:T	\N	-158999	pQTL	1.17e-02	-0.928	0.367	0.0	0.00108
chr1:46342081:C:T	\N	167008	pQTL	4.81e-02	-0.376	0.19	0.0	0.00434
chr1:46002273:T:C	\N	-172800	pQTL	2.02e-02	-0.515	0.222	0.0	0.00325
chr1:46000190:T:G	\N	-174883	pQTL	4.65e-02	-0.612	0.307	0.0	0.00181
chr1:46352224:G:A	\N	177151	pQTL	3.33e-02	-0.436	0.204	0.0	0.00397
chr1:45996374:T:A	rs182910051	-178699	pQTL	1.92e-02	-0.266	0.114	0.0	0.0126
chr1:46357750:C:T	\N	182677	pQTL	1.34e-02	-0.682	0.275	0.0	0.00217
chr1:45991589:T:C	rs149811247	-183484	pQTL	2.01e-02	-0.264	0.114	0.0	0.0126
chr1:46359095:T:TA	\N	184022	pQTL	3.73e-03	-0.797	0.274	0.00194	0.00217
chr1:45989059:A:G	\N	-186014	pQTL	2.02e-02	-0.515	0.222	0.0	0.00325
chr1:46363573:C:CAGCT	\N	188500	pQTL	4.77e-02	-0.428	0.216	0.0	0.00361
chr1:46364632:A:C	\N	189559	pQTL	3.60e-02	-0.353	0.168	0.0	0.00614
chr1:45985002:TAAAC:T	\N	-190071	pQTL	2.02e-02	-0.515	0.222	0.0	0.00325
chr1:46365558:T:A	\N	190485	pQTL	2.08e-02	0.651	0.281	0.0	0.00289
chr1:45982884:A:G	\N	-192189	pQTL	4.40e-02	0.618	0.307	0.0	0.00181
chr1:45982430:G:A	\N	-192643	pQTL	3.53e-02	-0.469	0.223	0.0	0.00397
chr1:45978911:C:T	\N	-196162	pQTL	3.17e-02	0.269	0.125	0.0	0.0101
chr1:45977005:A:G	\N	-198068	pQTL	4.66e-02	-0.651	0.327	0.0	0.00217
chr1:45972044:A:G	rs149948276	-203029	pQTL	1.93e-02	0.151	0.0646	0.0	0.0444
chr1:46383013:C:T	\N	207940	pQTL	2.54e-02	0.268	0.12	0.0	0.0108
chr1:45965720:AT:A	\N	-209353	pQTL	2.98e-02	-0.365	0.168	0.0	0.00614
chr1:45963606:T:G	\N	-211467	pQTL	1.46e-02	-1.09	0.445	0.0	0.00108
chr1:46388886:C:T	\N	213813	pQTL	3.82e-02	0.961	0.463	0.0	0.00108
chr1:45956909:A:G	\N	-218164	pQTL	2.00e-02	-0.657	0.282	0.0	0.00217
chr1:45950319:T:C	\N	-224754	pQTL	1.76e-02	-0.527	0.222	0.0	0.00325
chr1:45949672:G:A	\N	-225401	pQTL	1.20e-02	-0.666	0.265	0.0	0.00289
chr1:46404686:G:A	\N	229613	pQTL	4.87e-02	-0.425	0.216	0.0	0.00361
chr1:46405931:G:C	\N	230858	pQTL	2.50e-02	0.269	0.12	0.0	0.0108
chr1:45941601:T:C	\N	-233472	pQTL	1.81e-02	-0.669	0.283	0.0	0.00217
chr1:46410762:C:T	\N	235689	pQTL	1.34e-02	-0.682	0.275	0.0	0.00217
chr1:45932635:T:C	rs147855074	-242438	pQTL	3.22e-02	0.143	0.0666	0.0	0.0408
chr1:46423003:G:A	rs77878798	247930	pQTL	4.15e-02	-0.173	0.0848	0.0	0.0235
chr1:45923997:C:T	\N	-251076	pQTL	1.72e-02	-0.529	0.222	0.0	0.00325
chr1:46428605:C:T	\N	253532	pQTL	3.21e-02	0.532	0.248	0.0	0.00253
chr1:45919020:G:A	\N	-256053	pQTL	2.05e-02	0.462	0.199	0.0	0.00397
chr1:46434275:A:G	rs74072346	259202	pQTL	1.53e-02	-0.183	0.0754	0.0	0.0293
chr1:46434677:C:A	rs12407648	259604	pQTL	2.02e-02	-0.175	0.0754	0.0	0.0293
chr1:46434772:T:TGTGGGAATGC	rs144675479	259699	pQTL	2.02e-02	-0.175	0.0754	0.0	0.0293
chr1:46435148:A:G	rs3737743	260075	pQTL	2.37e-02	-0.17	0.0753	0.0	0.03
chr1:46435375:A:G	rs3737742	260302	pQTL	2.37e-02	-0.17	0.0753	0.0	0.03
chr1:46435880:G:T	rs78900176	260807	pQTL	4.63e-02	-0.259	0.13	0.0	0.0101
chr1:46436208:A:G	rs2274422	261135	pQTL	2.37e-02	-0.171	0.0754	0.0	0.03
chr1:46436445:T:C	rs3818506	261372	pQTL	2.37e-02	-0.17	0.0753	0.0	0.03
chr1:46436518:T:C	rs75464223	261445	pQTL	2.37e-02	-0.17	0.0753	0.0	0.03
chr1:46436680:A:T	rs78869137	261607	pQTL	2.37e-02	-0.17	0.0753	0.0	0.03
chr1:46436963:A:T	rs78211738	261890	pQTL	2.37e-02	-0.17	0.0753	0.0	0.03
chr1:46437164:T:C	rs10890396	262091	pQTL	1.72e-02	-0.0622	0.0261	0.0	0.427
chr1:46437597:C:T	\N	262524	pQTL	4.63e-02	-0.259	0.13	0.0	0.0101
chr1:46437997:C:T	rs74833727	262924	pQTL	4.63e-02	-0.259	0.13	0.0	0.0101
chr1:46438538:G:A	rs77073058	263465	pQTL	4.63e-02	-0.259	0.13	0.0	0.0101
chr1:46439679:T:G	\N	264606	pQTL	2.37e-02	-0.17	0.0753	0.0	0.03
chr1:46440039:C:G	rs75428143	264966	pQTL	2.37e-02	-0.17	0.0753	0.0	0.03
chr1:46442043:G:A	rs139527338	266970	pQTL	2.77e-02	-0.165	0.0748	0.0	0.0296
chr1:46442684:G:C	rs75289280	267611	pQTL	2.77e-02	-0.165	0.0748	0.0	0.0296
chr1:46443093:C:A	rs79781073	268020	pQTL	2.77e-02	-0.165	0.0748	0.0	0.0296
chr1:45905339:C:T	\N	-269734	pQTL	2.70e-02	-0.409	0.185	0.0	0.0047
chr1:46445217:G:A	rs190445264	270144	pQTL	4.49e-02	-0.259	0.129	0.0	0.0101
chr1:46445478:C:T	rs74227913	270405	pQTL	2.77e-02	-0.165	0.0748	0.0	0.0296
chr1:46445484:A:C	rs74227914	270411	pQTL	2.77e-02	-0.165	0.0748	0.0	0.0296
chr1:46445778:A:T	rs117056215	270705	pQTL	2.77e-02	-0.165	0.0748	0.0	0.0296
chr1:46446604:T:G	rs12406553	271531	pQTL	2.77e-02	-0.165	0.0748	0.0	0.0296
chr1:46446734:G:A	rs12407445	271661	pQTL	2.77e-02	-0.165	0.0748	0.0	0.0296
chr1:46447097:C:T	\N	272024	pQTL	2.77e-03	-0.945	0.315	0.00243	0.00181
chr1:46447635:CA:C	rs199913034	272562	pQTL	2.77e-02	-0.165	0.0748	0.0	0.0296
chr1:46448494:C:T	rs77421921	273421	pQTL	2.84e-02	-0.164	0.0748	0.0	0.0296
chr1:46448544:C:T	rs141059004	273471	pQTL	2.77e-02	-0.165	0.0748	0.0	0.0296
chr1:45901155:TC:T	rs148404493	-273918	pQTL	3.05e-02	-0.134	0.0618	0.0	0.0444
chr1:46449373:T:C	rs79938438	274300	pQTL	3.22e-02	-0.159	0.074	0.0	0.0303
chr1:46449885:A:G	rs117307648	274812	pQTL	3.22e-02	-0.159	0.074	0.0	0.0303
chr1:46449894:G:A	rs189305903	274821	pQTL	4.41e-02	-0.258	0.128	0.0	0.0101
chr1:46449980:G:A	rs75376918	274907	pQTL	4.41e-02	-0.258	0.128	0.0	0.0101
chr1:46450374:T:C	rs76488306	275301	pQTL	3.18e-02	-0.159	0.074	0.0	0.0303
chr1:46450471:T:C	rs74663946	275398	pQTL	4.41e-02	-0.258	0.128	0.0	0.0101
chr1:46453796:C:T	rs138363947	278723	pQTL	4.41e-02	-0.258	0.128	0.0	0.0101
chr1:46454328:T:A	rs77988927	279255	pQTL	4.41e-02	-0.258	0.128	0.0	0.0101
chr1:46457276:C:T	rs12402011	282203	pQTL	2.06e-02	-0.178	0.0767	0.0	0.0278
chr1:46459290:C:A	\N	284217	pQTL	2.92e-02	0.265	0.122	0.0	0.0105
chr1:46461492:CA:C	rs78271447	286419	pQTL	3.12e-02	-0.271	0.126	0.0	0.0105
chr1:46462573:T:C	rs77229831	287500	pQTL	3.12e-02	-0.271	0.126	0.0	0.0105
chr1:46464669:T:C	rs76610557	289596	pQTL	7.69e-03	-0.265	0.0994	0.00112	0.0159
chr1:46464991:C:T	rs74500941	289918	pQTL	3.66e-03	-0.29	0.0996	0.00196	0.0159
chr1:46466182:A:G	rs76108244	291109	pQTL	2.81e-02	-0.178	0.081	0.0	0.0242
chr1:46467677:C:G	\N	292604	pQTL	2.76e-02	-0.179	0.0811	0.0	0.0242
chr1:46468154:C:T	\N	293081	pQTL	1.30e-02	-0.683	0.274	0.0	0.00217
chr1:46468589:C:T	rs6677677	293516	pQTL	2.76e-02	-0.179	0.0811	0.0	0.0242
chr1:46470405:A:G	rs1886119	295332	pQTL	3.78e-02	-0.0617	0.0297	0.0	0.226
chr1:46471483:C:A	rs4660937	296410	pQTL	3.49e-02	-0.0626	0.0297	0.0	0.228
chr1:46472681:T:C	rs4660938	297608	pQTL	4.13e-02	-0.0609	0.0298	0.0	0.225
chr1:46476270:GC:G	rs35906044	301197	pQTL	4.95e-02	-0.0561	0.0286	0.0	0.257
chr1:46476687:G:C	\N	301614	pQTL	4.16e-02	0.256	0.126	0.0	0.0101
chr1:45867914:C:T	\N	-307159	pQTL	1.71e-02	-0.529	0.222	0.0	0.00325
chr1:46508371:AG:A	\N	333298	pQTL	2.25e-03	-0.964	0.315	0.00285	0.00181
chr1:45838591:A:T	\N	-336482	pQTL	4.79e-02	-0.292	0.147	0.0	0.00686
chr1:46518079:C:G	\N	343006	pQTL	3.03e-02	-0.834	0.385	0.0	0.00108
chr1:45817596:A:G	\N	-357477	pQTL	1.71e-02	-0.529	0.222	0.0	0.00325
chr1:46533208:GCGCGGCCGCCACCCTGGCCCGGGCCCGC:G	\N	358135	pQTL	1.28e-02	-0.58	0.233	0.0	0.00325
chr1:45815370:A:G	rs12043757	-359703	pQTL	3.45e-02	0.131	0.0619	0.0	0.0491
chr1:46536050:G:A	rs2896917	360977	pQTL	4.88e-02	0.0624	0.0316	0.0	0.192
chr1:46537314:C:T	\N	362241	pQTL	9.31e-03	1.04	0.399	0.0	0.00108
chr1:45805227:T:G	rs186640764	-369846	pQTL	2.16e-02	-0.262	0.114	0.0	0.0126
chr1:46546075:A:G	\N	371002	pQTL	7.93e-03	0.688	0.259	0.00109	0.00253
chr1:45803471:C:T	rs372503478	-371602	pQTL	2.63e-02	-0.136	0.061	0.0	0.0448
chr1:45802811:G:A	\N	-372262	pQTL	2.05e-02	0.355	0.153	0.0	0.00759
chr1:45801702:C:T	\N	-373371	pQTL	1.97e-02	0.465	0.199	0.0	0.00397
chr1:45796022:A:G	\N	-379051	pQTL	3.94e-02	-0.973	0.472	0.0	0.00108
chr1:45790041:C:T	\N	-385032	pQTL	2.79e-02	0.914	0.415	0.0	0.00108
chr1:45789315:T:C	\N	-385758	pQTL	1.99e-02	-0.657	0.282	0.0	0.00217
chr1:46565227:G:A	\N	390154	pQTL	4.15e-03	-0.506	0.176	0.00177	0.00434
chr1:46571698:G:T	\N	396625	pQTL	3.00e-02	0.251	0.116	0.0	0.0116
chr1:45777707:C:T	\N	-397366	pQTL	1.71e-02	-0.529	0.222	0.0	0.00325
chr1:45776258:C:T	rs79997286	-398815	pQTL	2.64e-02	-0.135	0.0605	0.0	0.0448
chr1:45765678:C:T	\N	-409395	pQTL	1.67e-02	-0.532	0.222	0.0	0.00325
chr1:46585617:T:C	\N	410544	pQTL	1.67e-02	-0.916	0.382	0.0	0.00108
chr1:45760768:C:A	\N	-414305	pQTL	2.89e-02	-0.491	0.224	0.0	0.00325
chr1:45760390:C:T	\N	-414683	pQTL	1.71e-02	-0.529	0.222	0.0	0.00325
chr1:45755487:T:C	\N	-419586	pQTL	2.89e-02	-0.491	0.224	0.0	0.00325
chr1:46595365:C:T	\N	420292	pQTL	9.56e-03	-0.538	0.207	0.0	0.00361
chr1:46595516:T:C	\N	420443	pQTL	4.99e-02	-0.32	0.163	0.0	0.00614
chr1:45747625:C:A	\N	-427448	pQTL	1.71e-02	-0.529	0.222	0.0	0.00325
chr1:45746281:C:T	\N	-428792	pQTL	1.71e-02	-0.529	0.222	0.0	0.00325
chr1:45743912:G:A	\N	-431161	pQTL	1.71e-02	-0.529	0.222	0.0	0.00325
chr1:46608790:A:G	rs2181413	433717	pQTL	2.56e-02	-0.0813	0.0364	0.0	0.146
chr1:45731829:A:C	\N	-443244	pQTL	1.71e-02	-0.529	0.222	0.0	0.00325
chr1:46623818:T:C	\N	448745	pQTL	2.00e-02	0.796	0.342	0.0	0.00145
chr1:46628422:T:A	rs181902890	453349	pQTL	4.98e-02	0.195	0.0995	0.0	0.017
chr1:46635203:T:A	\N	460130	pQTL	1.04e-02	0.681	0.265	0.0	0.00253
chr1:46640278:G:A	rs1258059	465205	pQTL	4.85e-02	-0.0606	0.0307	0.0	0.228
chr1:45707582:T:C	\N	-467491	pQTL	2.05e-02	0.462	0.199	0.0	0.00397
chr1:46642671:A:G	rs946320	467598	pQTL	4.68e-02	-0.061	0.0307	0.0	0.228
chr1:46643417:A:G	rs1745377	468344	pQTL	4.68e-02	-0.061	0.0307	0.0	0.228
chr1:46644244:T:C	rs1258056	469171	pQTL	4.68e-02	-0.061	0.0307	0.0	0.228
chr1:46644996:G:C	rs1258054	469923	pQTL	4.68e-02	-0.061	0.0307	0.0	0.228
chr1:46645040:C:T	rs1258053	469967	pQTL	4.68e-02	-0.061	0.0307	0.0	0.228
chr1:45704299:G:C	\N	-470774	pQTL	2.05e-02	0.462	0.199	0.0	0.00397
chr1:46648339:G:T	rs6666405	473266	pQTL	4.56e-02	0.0612	0.0306	0.0	0.228
chr1:46650885:T:G	rs647999	475812	pQTL	4.56e-02	0.0612	0.0306	0.0	0.228
chr1:46652517:G:T	rs620431	477444	pQTL	4.55e-02	0.0612	0.0306	0.0	0.228
chr1:46652929:T:C	rs618554	477856	pQTL	4.56e-02	0.0612	0.0306	0.0	0.228
chr1:46653246:A:G	rs1150068	478173	pQTL	4.56e-02	0.0612	0.0306	0.0	0.228
chr1:46657606:G:A	rs595813	482533	pQTL	4.45e-02	0.0614	0.0305	0.0	0.228
chr1:46658532:C:CA	\N	483459	pQTL	4.46e-02	0.0614	0.0305	0.0	0.228
chr1:46658807:A:G	rs611468	483734	pQTL	4.45e-02	0.0614	0.0305	0.0	0.228
chr1:45691205:A:G	\N	-483868	pQTL	2.33e-03	0.926	0.304	0.00273	0.00181
chr1:46659611:G:A	rs117791252	484538	pQTL	4.75e-02	0.0694	0.035	0.0	0.172
chr1:46660719:A:G	rs1440488	485646	pQTL	4.04e-02	0.0623	0.0304	0.0	0.228
chr1:46660720:T:C	rs1440489	485647	pQTL	4.46e-02	0.0614	0.0305	0.0	0.228
chr1:46661594:C:A	rs76286892	486521	pQTL	4.44e-02	0.0701	0.0349	0.0	0.172
chr1:46666642:T:C	rs637760	491569	pQTL	4.45e-02	0.0615	0.0306	0.0	0.228
chr1:46667388:T:C	rs625507	492315	pQTL	4.45e-02	0.0615	0.0306	0.0	0.228
chr1:45682563:T:A	\N	-492510	pQTL	2.15e-02	0.352	0.153	0.0	0.00759
chr1:46668555:T:G	rs117895472	493482	pQTL	4.10e-02	0.0714	0.0349	0.0	0.172
chr1:46668649:T:G	rs12094663	493576	pQTL	4.51e-02	0.0613	0.0306	0.0	0.228
chr1:46669241:T:A	\N	494168	pQTL	1.53e-02	-1.17	0.484	0.0	0.00108
chr1:45680847:C:A	\N	-494226	pQTL	2.03e-02	-0.653	0.281	0.0	0.00217
chr1:45680170:T:C	\N	-494903	pQTL	2.05e-02	0.461	0.199	0.0	0.00397
chr1:45676437:C:CA	\N	-498636	pQTL	3.61e-02	0.388	0.185	0.0	0.00542
chr1:46675113:T:C	\N	500040	pQTL	4.46e-02	0.0615	0.0306	0.0	0.229
chr1:45674898:T:C	\N	-500175	pQTL	1.56e-02	-0.642	0.265	0.0	0.00289
chr1:45664268:C:G	\N	-510805	pQTL	3.65e-04	1.36	0.379	0.0154	0.00108
chr1:46688611:C:T	\N	513538	pQTL	1.27e-02	0.636	0.255	0.0	0.00253
chr1:46690510:C:T	\N	515437	pQTL	4.76e-02	0.249	0.126	0.0	0.00975
chr1:45656031:C:G	\N	-519042	pQTL	2.06e-02	0.461	0.199	0.0	0.00397
chr1:46698470:TTAAAA:T	\N	523397	pQTL	3.09e-02	-0.188	0.0871	0.0	0.0213
chr1:46698814:A:G	\N	523741	pQTL	1.15e-02	-0.978	0.387	0.0	0.00108
chr1:45644008:A:G	\N	-531065	pQTL	1.86e-02	-0.618	0.262	0.0	0.00289
chr1:46707329:T:C	\N	532256	pQTL	1.05e-02	0.313	0.122	0.0	0.0105
chr1:46707678:T:C	\N	532605	pQTL	1.78e-02	-0.829	0.35	0.0	0.00145
chr1:46707974:C:T	\N	532901	pQTL	4.59e-02	-0.444	0.222	0.0	0.00325
chr1:46709710:G:A	\N	534637	pQTL	1.86e-02	0.8	0.339	0.0	0.00145
chr1:45637936:G:T	\N	-537137	pQTL	1.71e-02	-0.529	0.222	0.0	0.00325
chr1:45630884:G:A	rs4512690	-544189	pQTL	4.61e-02	0.27	0.135	0.0	0.00903
chr1:46727228:T:C	\N	552155	pQTL	1.78e-02	-0.83	0.35	0.0	0.00145
chr1:46727402:GT:G	rs549189973	552329	pQTL	3.57e-02	-0.148	0.0704	0.0	0.034
chr1:45621196:T:C	\N	-553877	pQTL	1.11e-02	-0.726	0.285	0.0	0.00217
chr1:45616241:TAGTC:T	\N	-558832	pQTL	1.70e-02	-0.53	0.222	0.0	0.00325
chr1:45612454:C:T	\N	-562619	pQTL	2.55e-02	0.27	0.121	0.0	0.0119
chr1:45610826:C:T	\N	-564247	pQTL	1.71e-02	-0.529	0.222	0.0	0.00325
chr1:45606675:C:G	\N	-568398	pQTL	2.07e-02	0.46	0.199	0.0	0.00397
chr1:46753149:T:A	\N	578076	pQTL	2.92e-02	0.661	0.303	0.0	0.00181
chr1:46753597:T:A	\N	578524	pQTL	1.26e-02	-0.395	0.158	0.0	0.00723
chr1:45596523:G:T	\N	-578550	pQTL	1.66e-02	-0.643	0.268	0.0	0.00289
chr1:46758588:C:A	\N	583515	pQTL	1.12e-02	-0.402	0.158	0.0	0.0065
chr1:45588383:C:T	\N	-586690	pQTL	2.18e-02	-0.412	0.18	0.0	0.00506
chr1:46764751:C:G	\N	589678	pQTL	4.15e-02	0.393	0.193	0.0	0.0047
chr1:45585208:C:CAGT	\N	-589865	pQTL	1.97e-02	0.464	0.199	0.0	0.00397
chr1:46770963:C:T	rs143439293	595890	pQTL	4.60e-02	-0.148	0.074	0.0	0.0322
chr1:45574592:C:T	\N	-600481	pQTL	1.70e-02	-0.53	0.222	0.0	0.00325
chr1:45574590:TG:T	\N	-600483	pQTL	1.70e-02	-0.53	0.222	0.0	0.00325
chr1:46778117:C:G	\N	603044	pQTL	9.74e-04	-0.62	0.187	0.00583	0.00506
chr1:45570130:G:A	\N	-604943	pQTL	5.26e-03	-1.12	0.401	0.00147	0.00108
chr1:45568877:G:T	\N	-606196	pQTL	1.78e-02	0.47	0.198	0.0	0.00397
chr1:45566478:G:A	\N	-608595	pQTL	2.97e-02	0.873	0.401	0.0	0.00108
chr1:46784667:T:TA	\N	609594	pQTL	2.62e-02	1.05	0.474	0.0	0.00108
chr1:45556176:A:G	\N	-618897	pQTL	2.41e-02	-0.903	0.4	0.0	0.00108
chr1:45555932:G:A	\N	-619141	pQTL	1.78e-02	0.47	0.198	0.0	0.00397
chr1:46811728:A:C	\N	636655	pQTL	4.58e-02	-0.592	0.296	0.0	0.00217
chr1:46816699:C:G	\N	641626	pQTL	1.24e-02	0.638	0.255	0.0	0.00253
chr1:45524616:C:A	\N	-650457	pQTL	2.35e-02	-0.904	0.399	0.0	0.00108
chr1:46826874:T:C	rs150419660	651801	pQTL	3.08e-02	0.247	0.114	0.0	0.0126
chr1:45520560:C:A	\N	-654513	pQTL	4.55e-02	-0.634	0.317	0.0	0.00181
chr1:45511842:CA:C	\N	-663231	pQTL	2.00e-02	0.382	0.164	0.0	0.00686
chr1:45509702:G:A	\N	-665371	pQTL	4.61e-02	-0.655	0.328	0.0	0.00181
chr1:45504300:C:T	rs183440181	-670773	pQTL	3.46e-02	0.302	0.143	0.0	0.00795
chr1:45494395:C:A	\N	-680678	pQTL	3.48e-04	1.46	0.406	0.0159	0.00108
chr1:46862730:A:G	rs77791943	687657	pQTL	4.54e-02	0.227	0.113	0.0	0.0134
chr1:46868148:C:A	\N	693075	pQTL	7.53e-03	-0.923	0.345	0.00112	0.00145
chr1:46870021:A:T	rs12046898	694948	pQTL	4.82e-02	-0.108	0.0547	0.0	0.0589
chr1:46885101:T:C	\N	710028	pQTL	1.24e-02	0.637	0.255	0.0	0.00253
chr1:45462866:G:A	\N	-712207	pQTL	7.43e-03	-0.544	0.203	0.00114	0.00397
chr1:45452889:A:C	\N	-722184	pQTL	4.84e-02	0.982	0.497	0.0	0.00108
chr1:46897362:T:C	\N	722289	pQTL	2.13e-03	-0.769	0.25	0.00297	0.00361
chr1:45448605:T:C	\N	-726468	pQTL	1.12e-02	-0.599	0.236	0.0	0.00289
chr1:46901635:C:T	\N	726562	pQTL	4.62e-02	-0.463	0.232	0.0	0.00361
chr1:46914025:G:T	\N	738952	pQTL	3.96e-02	0.495	0.24	0.0	0.00289
chr1:46914026:T:C	\N	738953	pQTL	3.96e-02	0.495	0.24	0.0	0.00289
chr1:45430877:A:G	\N	-744196	pQTL	2.43e-03	0.926	0.305	0.00265	0.00181
chr1:46922222:G:C	\N	747149	pQTL	1.15e-02	-0.498	0.197	0.0	0.00434
chr1:45427000:T:C	\N	-748073	pQTL	7.41e-03	-0.545	0.203	0.00114	0.00397
chr1:46924200:C:T	\N	749127	pQTL	1.92e-02	0.337	0.144	0.0	0.00795
chr1:45401170:G:A	\N	-773903	pQTL	7.41e-03	-0.545	0.203	0.00111	0.00397
chr1:46955115:A:G	\N	780042	pQTL	4.65e-02	-0.261	0.131	0.0	0.00975
chr1:46956133:AC:A	rs373340268	781060	pQTL	2.77e-02	0.202	0.0916	0.0	0.0206
chr1:46956135:C:T	rs547829277	781062	pQTL	2.77e-02	0.202	0.0916	0.0	0.0206
chr1:46964402:G:A	\N	789329	pQTL	2.20e-02	-1.04	0.456	0.0	0.00108
chr1:46965562:C:T	\N	790489	pQTL	6.51e-03	-0.874	0.321	0.00126	0.00181
chr1:45383660:T:G	\N	-791413	pQTL	7.41e-03	-0.545	0.203	0.00114	0.00397
chr1:45379945:C:T	\N	-795128	pQTL	5.27e-03	-1.11	0.397	0.00143	0.00108
chr1:45378930:T:C	\N	-796143	pQTL	2.38e-02	-0.44	0.195	0.0	0.0047
chr1:45377835:G:A	\N	-797238	pQTL	7.41e-03	-0.545	0.203	0.00114	0.00397
chr1:46974813:C:A	rs78980337	799740	pQTL	3.38e-02	0.192	0.0902	0.0	0.021
chr1:45374523:A:G	\N	-800550	pQTL	7.41e-03	-0.545	0.203	0.00114	0.00397
chr1:45374464:T:C	\N	-800609	pQTL	4.50e-02	0.376	0.187	0.0	0.00578
chr1:46989249:A:C	\N	814176	pQTL	4.75e-02	-0.558	0.281	0.0	0.00217
chr1:46989322:C:T	\N	814249	pQTL	4.14e-02	-0.474	0.232	0.0	0.00325
chr1:46989336:T:C	\N	814263	pQTL	2.35e-02	-0.495	0.218	0.0	0.00361
chr1:45360234:G:A	\N	-814839	pQTL	4.30e-02	0.389	0.192	0.0	0.00506
chr1:45355547:A:AT	\N	-819526	pQTL	3.01e-02	-0.849	0.391	0.0	0.00108
chr1:45344859:T:C	\N	-830214	pQTL	2.10e-03	0.948	0.307	0.00297	0.00181
chr1:45344816:A:G	\N	-830257	pQTL	4.51e-02	-0.636	0.317	0.0	0.00181
chr1:47006657:G:C	\N	831584	pQTL	5.93e-03	-0.956	0.347	0.00134	0.00145
chr1:47008378:G:A	\N	833305	pQTL	2.28e-02	0.361	0.159	0.0	0.00686
chr1:47009917:T:C	\N	834844	pQTL	1.18e-02	-0.629	0.249	0.0	0.00253
chr1:45339952:G:A	\N	-835121	pQTL	7.43e-03	-0.544	0.203	0.00114	0.00397
chr1:47024382:A:G	\N	849309	pQTL	3.66e-02	-0.744	0.356	0.0	0.00145
chr1:45324413:C:T	\N	-850660	pQTL	4.08e-02	0.64	0.313	0.0	0.00181
chr1:45322275:T:C	\N	-852798	pQTL	2.30e-02	-0.901	0.396	0.0	0.00108
chr1:47028291:G:T	\N	853218	pQTL	3.13e-02	-0.478	0.222	0.0	0.00325
chr1:47028888:T:C	\N	853815	pQTL	4.97e-02	0.978	0.498	0.0	0.00108
chr1:45316624:G:A	\N	-858449	pQTL	1.10e-02	-0.602	0.236	0.0	0.00289
chr1:47034599:C:G	\N	859526	pQTL	3.07e-03	-0.969	0.327	0.00222	0.00181
chr1:47040451:G:C	\N	865378	pQTL	2.98e-02	-0.483	0.222	0.0	0.00325
chr1:47042656:T:C	\N	867583	pQTL	1.32e-02	-1.04	0.419	0.0	0.00108
chr1:45306165:G:A	\N	-868908	pQTL	4.45e-02	0.386	0.192	0.0	0.00506
chr1:45305847:C:T	\N	-869226	pQTL	2.44e-02	0.366	0.162	0.0	0.00686
chr1:45301252:C:T	\N	-873821	pQTL	3.33e-02	-0.846	0.397	0.0	0.00108
chr1:45294443:A:G	\N	-880630	pQTL	2.61e-02	-0.877	0.394	0.0	0.00108
chr1:47056691:T:C	\N	881618	pQTL	3.47e-02	0.458	0.217	0.0	0.00361
chr1:47062253:T:C	\N	887180	pQTL	1.73e-02	-0.581	0.244	0.0	0.00289
chr1:45287554:T:G	\N	-887519	pQTL	1.94e-02	0.242	0.103	0.0	0.017
chr1:47063901:A:T	\N	888828	pQTL	1.55e-02	-0.535	0.221	0.0	0.00325
chr1:45285864:G:T	\N	-889209	pQTL	2.61e-02	-0.877	0.394	0.0	0.00108
chr1:45280885:C:T	\N	-894188	pQTL	3.93e-02	0.645	0.313	0.0	0.00181
chr1:45279999:A:G	rs77242764	-895074	pQTL	3.30e-02	0.107	0.0503	0.0	0.0813
chr1:45278962:G:A	\N	-896111	pQTL	9.79e-03	-0.633	0.245	0.0	0.00289
chr1:47074713:C:A	\N	899640	pQTL	1.51e-02	-0.547	0.225	0.0	0.00325
chr1:47076987:T:C	\N	901914	pQTL	1.74e-02	-1.09	0.458	0.0	0.00108
chr1:47077174:T:C	\N	902101	pQTL	1.22e-02	0.639	0.255	0.0	0.00253
chr1:45272934:A:G	\N	-902139	pQTL	2.52e-02	-0.882	0.394	0.0	0.00108
chr1:47079417:G:C	\N	904344	pQTL	2.86e-03	-1.01	0.34	0.00223	0.00181
chr1:45268655:C:T	\N	-906418	pQTL	4.46e-02	-0.304	0.151	0.0	0.00723
chr1:47089636:T:G	\N	914563	pQTL	4.43e-02	0.238	0.118	0.0	0.0112
chr1:45253240:C:T	\N	-921833	pQTL	2.65e-02	-0.858	0.386	0.0	0.00108
chr1:47098338:C:T	\N	923265	pQTL	2.74e-02	-0.482	0.218	0.0	0.00361
chr1:47099536:C:T	\N	924463	pQTL	4.35e-02	0.444	0.22	0.0	0.00361
chr1:47102488:T:C	\N	927415	pQTL	2.74e-02	-0.482	0.218	0.0	0.00361
chr1:47108417:G:A	\N	933344	pQTL	1.49e-02	0.342	0.14	0.0	0.00867
chr1:47115490:C:T	\N	940417	pQTL	4.06e-02	0.551	0.269	0.0	0.00253
chr1:45230975:T:C	\N	-944098	pQTL	2.13e-02	-0.633	0.274	0.0	0.00253
chr1:47119651:A:G	\N	944578	pQTL	4.70e-02	-0.637	0.32	0.0	0.00181
chr1:45228260:A:G	\N	-946813	pQTL	4.19e-02	-0.309	0.152	0.0	0.00759
chr1:45227119:C:T	\N	-947954	pQTL	3.47e-02	-0.579	0.274	0.0	0.00217
chr1:47125293:G:A	\N	950220	pQTL	3.96e-02	0.555	0.269	0.0	0.00253
chr1:47126523:T:C	\N	951450	pQTL	4.69e-02	-0.636	0.32	0.0	0.00181
chr1:45217716:G:T	\N	-957357	pQTL	2.84e-02	-0.842	0.384	0.0	0.00108
chr1:45208590:A:AGACT	\N	-966483	pQTL	3.88e-02	-0.57	0.276	0.0	0.00217
chr1:45207056:A:G	\N	-968017	pQTL	8.96e-03	-0.658	0.252	0.0	0.00253
chr1:47150378:G:A	\N	975305	pQTL	1.49e-02	-1.15	0.472	0.0	0.00108
chr1:45199048:T:C	\N	-976025	pQTL	3.74e-02	-0.529	0.254	0.0	0.00289
chr1:45196776:A:G	\N	-978297	pQTL	1.50e-03	-0.756	0.238	0.00403	0.00289
chr1:47154353:T:C	\N	979280	pQTL	1.22e-02	0.639	0.255	0.0	0.00253
chr1:45195129:A:T	\N	-979944	pQTL	2.92e-02	-0.671	0.307	0.0	0.00181
chr1:47155355:A:T	\N	980282	pQTL	3.92e-02	-0.694	0.336	0.0	0.00145
chr1:47165309:T:C	\N	990236	pQTL	4.37e-02	-0.457	0.226	0.0	0.00325
chr1:45181119:G:C	\N	-993954	pQTL	3.14e-02	-0.829	0.385	0.0	0.00108
chr1:47170517:T:C	\N	995444	pQTL	4.85e-03	-0.89	0.315	0.00157	0.00181

Expression Fold Change in Massively Parallel Reporter Assay (MPRA)

[Click here to download the full results]

mpra plot

Variant ID	rs ID	TSS Distance	P-Value	Expression Fold Change	Tier	Cell Type