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Genes within 1Mb (chr6:132214698:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 -186777 sc-eQTL 3.33e-01 -0.0876 0.0902 0.575 B L1
ENSG00000079950 STX7 -298500 sc-eQTL 4.16e-02 0.0692 0.0338 0.575 B L1
ENSG00000112282 MED23 586456 sc-eQTL 4.37e-01 -0.0529 0.0679 0.575 B L1
ENSG00000112303 VNN2 -548761 sc-eQTL 3.20e-01 0.0638 0.064 0.575 B L1
ENSG00000112306 RPS12 -599871 sc-eQTL 1.24e-01 -0.0595 0.0385 0.575 B L1
ENSG00000146409 SLC18B1 -598641 sc-eQTL 9.78e-01 -0.0022 0.0816 0.575 B L1
ENSG00000228495 LINC01013 82810 sc-eQTL 2.13e-01 -0.0666 0.0533 0.575 B L1
ENSG00000079950 STX7 -298500 sc-eQTL 9.63e-01 -0.00303 0.0651 0.575 CD4T L1
ENSG00000112282 MED23 586456 sc-eQTL 7.71e-01 -0.0151 0.0517 0.575 CD4T L1
ENSG00000112303 VNN2 -548761 sc-eQTL 6.90e-01 -0.0225 0.0564 0.575 CD4T L1
ENSG00000112306 RPS12 -599871 sc-eQTL 3.88e-01 -0.0331 0.0383 0.575 CD4T L1
ENSG00000146409 SLC18B1 -598641 sc-eQTL 9.50e-03 0.2 0.0763 0.575 CD4T L1
ENSG00000079950 STX7 -298500 sc-eQTL 6.11e-01 0.0327 0.0642 0.575 CD8T L1
ENSG00000112282 MED23 586456 sc-eQTL 2.83e-01 0.068 0.0631 0.575 CD8T L1
ENSG00000112303 VNN2 -548761 sc-eQTL 2.52e-01 0.0859 0.0748 0.575 CD8T L1
ENSG00000112306 RPS12 -599871 sc-eQTL 1.46e-01 -0.0372 0.0255 0.575 CD8T L1
ENSG00000146409 SLC18B1 -598641 sc-eQTL 9.47e-01 -0.00511 0.0775 0.575 CD8T L1
ENSG00000079950 STX7 -298500 sc-eQTL 1.90e-01 0.0784 0.0596 0.57 DC L1
ENSG00000093134 VNN3 -520067 sc-eQTL 8.58e-01 -0.0133 0.0743 0.57 DC L1
ENSG00000112282 MED23 586456 sc-eQTL 5.27e-01 -0.0552 0.0871 0.57 DC L1
ENSG00000112299 VNN1 -499357 sc-eQTL 4.24e-01 -0.0642 0.08 0.57 DC L1
ENSG00000112303 VNN2 -548761 sc-eQTL 4.58e-01 0.0637 0.0857 0.57 DC L1
ENSG00000112306 RPS12 -599871 sc-eQTL 4.66e-01 -0.0351 0.048 0.57 DC L1
ENSG00000146409 SLC18B1 -598641 sc-eQTL 9.80e-01 0.00195 0.0761 0.57 DC L1
ENSG00000286438 AL591115.1 -888430 sc-eQTL 7.65e-01 0.0207 0.0693 0.57 DC L1
ENSG00000079950 STX7 -298500 sc-eQTL 7.83e-02 0.0778 0.044 0.575 Mono L1
ENSG00000093134 VNN3 -520067 sc-eQTL 4.86e-01 -0.0531 0.076 0.575 Mono L1
ENSG00000112282 MED23 586456 sc-eQTL 5.86e-01 0.0394 0.0722 0.575 Mono L1
ENSG00000112299 VNN1 -499357 sc-eQTL 7.08e-01 -0.0307 0.0818 0.575 Mono L1
ENSG00000112303 VNN2 -548761 sc-eQTL 3.96e-01 -0.0491 0.0577 0.575 Mono L1
ENSG00000112306 RPS12 -599871 sc-eQTL 1.37e-01 -0.0514 0.0344 0.575 Mono L1
ENSG00000146409 SLC18B1 -598641 sc-eQTL 8.32e-01 -0.0146 0.0685 0.575 Mono L1
ENSG00000079950 STX7 -298500 sc-eQTL 6.64e-01 0.0287 0.0659 0.573 NK L1
ENSG00000112282 MED23 586456 sc-eQTL 6.98e-01 -0.0234 0.0602 0.573 NK L1
ENSG00000112303 VNN2 -548761 sc-eQTL 1.38e-01 -0.121 0.0816 0.573 NK L1
ENSG00000112306 RPS12 -599871 sc-eQTL 8.25e-01 -0.00751 0.0339 0.573 NK L1
ENSG00000079950 STX7 -298500 sc-eQTL 2.43e-01 0.0787 0.0672 0.575 Other_T L1
ENSG00000112282 MED23 586456 sc-eQTL 7.86e-01 0.0229 0.0842 0.575 Other_T L1
ENSG00000112303 VNN2 -548761 sc-eQTL 7.86e-01 0.0222 0.0815 0.575 Other_T L1
ENSG00000112306 RPS12 -599871 sc-eQTL 6.30e-01 0.0156 0.0323 0.575 Other_T L1
ENSG00000146409 SLC18B1 -598641 sc-eQTL 6.72e-01 -0.0375 0.0885 0.575 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 -186777 sc-eQTL 1.30e-01 0.141 0.0924 0.561 B_Activated L2
ENSG00000079950 STX7 -298500 sc-eQTL 8.79e-01 -0.0133 0.0872 0.561 B_Activated L2
ENSG00000112282 MED23 586456 sc-eQTL 6.62e-01 -0.0423 0.0966 0.561 B_Activated L2
ENSG00000112303 VNN2 -548761 sc-eQTL 5.87e-02 -0.175 0.0919 0.561 B_Activated L2
ENSG00000112306 RPS12 -599871 sc-eQTL 7.62e-01 -0.0151 0.0497 0.561 B_Activated L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 9.47e-01 0.00579 0.0872 0.561 B_Activated L2
ENSG00000228495 LINC01013 82810 sc-eQTL 4.47e-02 0.166 0.0821 0.561 B_Activated L2
ENSG00000079931 MOXD1 -186777 sc-eQTL 5.96e-01 -0.0444 0.0835 0.575 B_Intermediate L2
ENSG00000079950 STX7 -298500 sc-eQTL 3.86e-01 0.0474 0.0546 0.575 B_Intermediate L2
ENSG00000112282 MED23 586456 sc-eQTL 3.80e-01 -0.073 0.083 0.575 B_Intermediate L2
ENSG00000112303 VNN2 -548761 sc-eQTL 3.05e-01 -0.0845 0.0821 0.575 B_Intermediate L2
ENSG00000112306 RPS12 -599871 sc-eQTL 1.76e-01 -0.0681 0.0502 0.575 B_Intermediate L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 6.26e-01 0.0443 0.0908 0.575 B_Intermediate L2
ENSG00000228495 LINC01013 82810 sc-eQTL 4.87e-01 -0.0537 0.0771 0.575 B_Intermediate L2
ENSG00000079931 MOXD1 -186777 sc-eQTL 1.37e-01 -0.124 0.0829 0.575 B_Memory L2
ENSG00000079950 STX7 -298500 sc-eQTL 3.89e-01 0.0564 0.0653 0.575 B_Memory L2
ENSG00000112282 MED23 586456 sc-eQTL 4.93e-01 -0.0577 0.0841 0.575 B_Memory L2
ENSG00000112303 VNN2 -548761 sc-eQTL 9.09e-01 0.00982 0.0855 0.575 B_Memory L2
ENSG00000112306 RPS12 -599871 sc-eQTL 8.38e-02 -0.0711 0.0409 0.575 B_Memory L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 7.41e-01 0.0285 0.086 0.575 B_Memory L2
ENSG00000228495 LINC01013 82810 sc-eQTL 1.27e-02 -0.198 0.0789 0.575 B_Memory L2
ENSG00000079931 MOXD1 -186777 sc-eQTL 6.30e-02 -0.172 0.092 0.575 B_Naive1 L2
ENSG00000079950 STX7 -298500 sc-eQTL 2.86e-02 0.0883 0.0401 0.575 B_Naive1 L2
ENSG00000112282 MED23 586456 sc-eQTL 2.59e-01 -0.0819 0.0724 0.575 B_Naive1 L2
ENSG00000112303 VNN2 -548761 sc-eQTL 5.44e-01 0.0478 0.0786 0.575 B_Naive1 L2
ENSG00000112306 RPS12 -599871 sc-eQTL 6.69e-02 -0.0819 0.0445 0.575 B_Naive1 L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 6.82e-01 -0.0355 0.0865 0.575 B_Naive1 L2
ENSG00000228495 LINC01013 82810 sc-eQTL 5.79e-01 -0.0318 0.0572 0.575 B_Naive1 L2
ENSG00000079931 MOXD1 -186777 sc-eQTL 3.59e-02 -0.182 0.0862 0.573 B_Naive2 L2
ENSG00000079950 STX7 -298500 sc-eQTL 1.97e-01 0.0612 0.0473 0.573 B_Naive2 L2
ENSG00000112282 MED23 586456 sc-eQTL 5.20e-01 0.0564 0.0876 0.573 B_Naive2 L2
ENSG00000112303 VNN2 -548761 sc-eQTL 9.30e-01 0.0077 0.0872 0.573 B_Naive2 L2
ENSG00000112306 RPS12 -599871 sc-eQTL 2.93e-02 -0.1 0.0456 0.573 B_Naive2 L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 7.35e-02 -0.157 0.0874 0.573 B_Naive2 L2
ENSG00000228495 LINC01013 82810 sc-eQTL 3.55e-02 -0.128 0.0604 0.573 B_Naive2 L2
ENSG00000079950 STX7 -298500 sc-eQTL 7.35e-01 -0.0298 0.0879 0.577 CD4_CTL L2
ENSG00000112282 MED23 586456 sc-eQTL 7.17e-01 0.0332 0.0914 0.577 CD4_CTL L2
ENSG00000112303 VNN2 -548761 sc-eQTL 7.17e-01 0.0321 0.0887 0.577 CD4_CTL L2
ENSG00000112306 RPS12 -599871 sc-eQTL 4.16e-01 -0.0333 0.0409 0.577 CD4_CTL L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 6.14e-01 0.0417 0.0826 0.577 CD4_CTL L2
ENSG00000079950 STX7 -298500 sc-eQTL 8.61e-01 0.0124 0.0703 0.575 CD4_Naive L2
ENSG00000112282 MED23 586456 sc-eQTL 6.66e-01 0.0259 0.06 0.575 CD4_Naive L2
ENSG00000112303 VNN2 -548761 sc-eQTL 7.53e-01 0.0205 0.0651 0.575 CD4_Naive L2
ENSG00000112306 RPS12 -599871 sc-eQTL 3.21e-01 -0.0419 0.0422 0.575 CD4_Naive L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 1.02e-02 0.207 0.0801 0.575 CD4_Naive L2
ENSG00000079950 STX7 -298500 sc-eQTL 5.02e-01 0.0518 0.077 0.575 CD4_TCM L2
ENSG00000112282 MED23 586456 sc-eQTL 3.93e-01 -0.0554 0.0647 0.575 CD4_TCM L2
ENSG00000112303 VNN2 -548761 sc-eQTL 2.95e-01 -0.0795 0.0758 0.575 CD4_TCM L2
ENSG00000112306 RPS12 -599871 sc-eQTL 1.57e-01 -0.0557 0.0392 0.575 CD4_TCM L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 3.10e-03 0.267 0.0893 0.575 CD4_TCM L2
ENSG00000079950 STX7 -298500 sc-eQTL 6.29e-01 -0.0436 0.0901 0.575 CD4_TEM L2
ENSG00000112282 MED23 586456 sc-eQTL 5.68e-01 0.0475 0.083 0.575 CD4_TEM L2
ENSG00000112303 VNN2 -548761 sc-eQTL 2.25e-01 -0.105 0.0862 0.575 CD4_TEM L2
ENSG00000112306 RPS12 -599871 sc-eQTL 1.36e-01 -0.0529 0.0353 0.575 CD4_TEM L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 9.18e-02 0.148 0.0876 0.575 CD4_TEM L2
ENSG00000079950 STX7 -298500 sc-eQTL 4.67e-02 0.146 0.0731 0.575 CD8_CTL L2
ENSG00000112282 MED23 586456 sc-eQTL 7.73e-01 0.0218 0.0756 0.575 CD8_CTL L2
ENSG00000112303 VNN2 -548761 sc-eQTL 2.37e-01 0.099 0.0835 0.575 CD8_CTL L2
ENSG00000112306 RPS12 -599871 sc-eQTL 4.26e-01 -0.0357 0.0448 0.575 CD8_CTL L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 1.95e-01 0.113 0.0865 0.575 CD8_CTL L2
ENSG00000079950 STX7 -298500 sc-eQTL 9.35e-01 0.00731 0.09 0.575 CD8_Naive L2
ENSG00000112282 MED23 586456 sc-eQTL 3.41e-01 0.0689 0.0722 0.575 CD8_Naive L2
ENSG00000112303 VNN2 -548761 sc-eQTL 3.54e-02 0.163 0.0768 0.575 CD8_Naive L2
ENSG00000112306 RPS12 -599871 sc-eQTL 7.12e-01 0.0164 0.0444 0.575 CD8_Naive L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 2.81e-01 -0.0962 0.0889 0.575 CD8_Naive L2
ENSG00000079950 STX7 -298500 sc-eQTL 4.21e-01 -0.0737 0.0913 0.574 CD8_TCM L2
ENSG00000112282 MED23 586456 sc-eQTL 6.90e-01 -0.0366 0.0917 0.574 CD8_TCM L2
ENSG00000112303 VNN2 -548761 sc-eQTL 1.87e-01 -0.12 0.0903 0.574 CD8_TCM L2
ENSG00000112306 RPS12 -599871 sc-eQTL 6.30e-01 -0.0213 0.0442 0.574 CD8_TCM L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 7.71e-01 0.0282 0.0969 0.574 CD8_TCM L2
ENSG00000079950 STX7 -298500 sc-eQTL 5.50e-01 -0.057 0.0951 0.582 CD8_TEM L2
ENSG00000112282 MED23 586456 sc-eQTL 2.72e-01 -0.101 0.0914 0.582 CD8_TEM L2
ENSG00000112303 VNN2 -548761 sc-eQTL 4.49e-01 0.0717 0.0945 0.582 CD8_TEM L2
ENSG00000112306 RPS12 -599871 sc-eQTL 4.91e-01 -0.0351 0.0509 0.582 CD8_TEM L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 1.09e-01 0.154 0.0957 0.582 CD8_TEM L2
ENSG00000079950 STX7 -298500 sc-eQTL 7.49e-01 0.0273 0.0852 0.576 MAIT L2
ENSG00000112282 MED23 586456 sc-eQTL 8.77e-01 0.0138 0.0891 0.576 MAIT L2
ENSG00000112303 VNN2 -548761 sc-eQTL 4.16e-01 0.0706 0.0865 0.576 MAIT L2
ENSG00000112306 RPS12 -599871 sc-eQTL 4.38e-01 -0.0331 0.0426 0.576 MAIT L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 7.47e-01 0.0289 0.0894 0.576 MAIT L2
ENSG00000079950 STX7 -298500 sc-eQTL 3.13e-01 0.0906 0.0895 0.58 NK_CD56bright L2
ENSG00000112282 MED23 586456 sc-eQTL 8.53e-01 0.0177 0.0949 0.58 NK_CD56bright L2
ENSG00000112303 VNN2 -548761 sc-eQTL 7.99e-01 -0.0232 0.0911 0.58 NK_CD56bright L2
ENSG00000112306 RPS12 -599871 sc-eQTL 2.57e-01 -0.0575 0.0506 0.58 NK_CD56bright L2
ENSG00000079950 STX7 -298500 sc-eQTL 9.53e-01 -0.0042 0.0713 0.571 NK_CD56dim L2
ENSG00000112282 MED23 586456 sc-eQTL 4.63e-01 -0.0539 0.0732 0.571 NK_CD56dim L2
ENSG00000112303 VNN2 -548761 sc-eQTL 2.56e-01 -0.101 0.089 0.571 NK_CD56dim L2
ENSG00000112306 RPS12 -599871 sc-eQTL 9.19e-01 -0.0036 0.0354 0.571 NK_CD56dim L2
ENSG00000079950 STX7 -298500 sc-eQTL 4.38e-01 -0.0686 0.0882 0.578 NK_HLA L2
ENSG00000112282 MED23 586456 sc-eQTL 1.39e-01 0.132 0.0888 0.578 NK_HLA L2
ENSG00000112303 VNN2 -548761 sc-eQTL 9.03e-01 0.0109 0.0895 0.578 NK_HLA L2
ENSG00000112306 RPS12 -599871 sc-eQTL 3.61e-01 -0.0381 0.0416 0.578 NK_HLA L2
ENSG00000079950 STX7 -298500 sc-eQTL 8.05e-01 -0.0192 0.0775 0.571 NK_cytokine L2
ENSG00000112282 MED23 586456 sc-eQTL 7.20e-01 -0.0287 0.0801 0.571 NK_cytokine L2
ENSG00000112303 VNN2 -548761 sc-eQTL 4.99e-01 -0.0589 0.087 0.571 NK_cytokine L2
ENSG00000112306 RPS12 -599871 sc-eQTL 9.86e-01 -0.00086 0.0473 0.571 NK_cytokine L2
ENSG00000079931 MOXD1 -186777 sc-eQTL 6.47e-01 0.043 0.0938 0.574 PB L2
ENSG00000079950 STX7 -298500 sc-eQTL 8.32e-01 0.0166 0.0784 0.574 PB L2
ENSG00000112282 MED23 586456 sc-eQTL 4.92e-01 0.0733 0.106 0.574 PB L2
ENSG00000112303 VNN2 -548761 sc-eQTL 2.81e-01 0.103 0.0953 0.574 PB L2
ENSG00000112306 RPS12 -599871 sc-eQTL 5.85e-01 -0.0298 0.0543 0.574 PB L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 4.01e-01 0.0856 0.102 0.574 PB L2
ENSG00000228495 LINC01013 82810 sc-eQTL 5.49e-01 -0.0402 0.0669 0.574 PB L2
ENSG00000079950 STX7 -298500 sc-eQTL 6.89e-02 0.146 0.0798 0.578 Pro_T L2
ENSG00000112282 MED23 586456 sc-eQTL 5.34e-02 -0.174 0.0897 0.578 Pro_T L2
ENSG00000112303 VNN2 -548761 sc-eQTL 4.28e-01 -0.0684 0.0862 0.578 Pro_T L2
ENSG00000112306 RPS12 -599871 sc-eQTL 4.42e-02 0.0654 0.0323 0.578 Pro_T L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 1.59e-01 -0.119 0.0841 0.578 Pro_T L2
ENSG00000079950 STX7 -298500 sc-eQTL 3.03e-01 0.0891 0.0863 0.575 Treg L2
ENSG00000112282 MED23 586456 sc-eQTL 5.92e-02 -0.167 0.0881 0.575 Treg L2
ENSG00000112303 VNN2 -548761 sc-eQTL 6.46e-01 0.0334 0.0727 0.575 Treg L2
ENSG00000112306 RPS12 -599871 sc-eQTL 3.30e-01 -0.0313 0.0321 0.575 Treg L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 2.16e-01 0.112 0.0906 0.575 Treg L2
ENSG00000079950 STX7 -298500 sc-eQTL 1.75e-01 0.104 0.0765 0.573 cDC L2
ENSG00000093134 VNN3 -520067 sc-eQTL 5.84e-01 0.0419 0.0763 0.573 cDC L2
ENSG00000112282 MED23 586456 sc-eQTL 2.60e-01 -0.112 0.099 0.573 cDC L2
ENSG00000112299 VNN1 -499357 sc-eQTL 3.82e-01 -0.0785 0.0896 0.573 cDC L2
ENSG00000112303 VNN2 -548761 sc-eQTL 1.54e-01 0.125 0.087 0.573 cDC L2
ENSG00000112306 RPS12 -599871 sc-eQTL 7.25e-01 -0.0152 0.0432 0.573 cDC L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 8.15e-01 -0.02 0.0855 0.573 cDC L2
ENSG00000286438 AL591115.1 -888430 sc-eQTL 4.61e-01 -0.0505 0.0683 0.573 cDC L2
ENSG00000079950 STX7 -298500 sc-eQTL 9.25e-02 0.0959 0.0568 0.575 cMono_IL1B L2
ENSG00000093134 VNN3 -520067 sc-eQTL 4.94e-01 -0.0553 0.0807 0.575 cMono_IL1B L2
ENSG00000112282 MED23 586456 sc-eQTL 4.22e-01 0.0641 0.0797 0.575 cMono_IL1B L2
ENSG00000112299 VNN1 -499357 sc-eQTL 9.33e-01 0.00689 0.0815 0.575 cMono_IL1B L2
ENSG00000112303 VNN2 -548761 sc-eQTL 4.47e-01 -0.0496 0.0651 0.575 cMono_IL1B L2
ENSG00000112306 RPS12 -599871 sc-eQTL 7.97e-02 -0.0633 0.0359 0.575 cMono_IL1B L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 5.95e-01 -0.0372 0.0698 0.575 cMono_IL1B L2
ENSG00000079950 STX7 -298500 sc-eQTL 8.73e-01 0.00995 0.0623 0.575 cMono_S100A L2
ENSG00000093134 VNN3 -520067 sc-eQTL 9.60e-01 0.00388 0.0778 0.575 cMono_S100A L2
ENSG00000112282 MED23 586456 sc-eQTL 2.82e-01 0.0907 0.0842 0.575 cMono_S100A L2
ENSG00000112299 VNN1 -499357 sc-eQTL 2.41e-01 -0.099 0.0842 0.575 cMono_S100A L2
ENSG00000112303 VNN2 -548761 sc-eQTL 4.00e-01 -0.0466 0.0552 0.575 cMono_S100A L2
ENSG00000112306 RPS12 -599871 sc-eQTL 5.22e-01 -0.0255 0.0398 0.575 cMono_S100A L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 9.13e-01 0.00808 0.0737 0.575 cMono_S100A L2
ENSG00000079950 STX7 -298500 sc-eQTL 8.81e-01 0.0155 0.103 0.591 gdT L2
ENSG00000112282 MED23 586456 sc-eQTL 9.85e-01 -0.00201 0.11 0.591 gdT L2
ENSG00000112303 VNN2 -548761 sc-eQTL 1.33e-01 0.17 0.113 0.591 gdT L2
ENSG00000112306 RPS12 -599871 sc-eQTL 5.82e-01 -0.0239 0.0433 0.591 gdT L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 7.07e-01 -0.0421 0.112 0.591 gdT L2
ENSG00000079950 STX7 -298500 sc-eQTL 2.42e-01 0.0971 0.0826 0.564 intMono L2
ENSG00000093134 VNN3 -520067 sc-eQTL 7.66e-01 0.0249 0.0837 0.564 intMono L2
ENSG00000112282 MED23 586456 sc-eQTL 2.43e-01 -0.107 0.0916 0.564 intMono L2
ENSG00000112299 VNN1 -499357 sc-eQTL 9.83e-01 -0.00172 0.0828 0.564 intMono L2
ENSG00000112303 VNN2 -548761 sc-eQTL 5.25e-01 -0.0535 0.084 0.564 intMono L2
ENSG00000112306 RPS12 -599871 sc-eQTL 6.68e-01 -0.0157 0.0366 0.564 intMono L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 3.04e-01 0.0915 0.0889 0.564 intMono L2
ENSG00000079950 STX7 -298500 sc-eQTL 7.39e-01 0.0205 0.0617 0.575 ncMono L2
ENSG00000093134 VNN3 -520067 sc-eQTL 7.91e-01 -0.0231 0.0871 0.575 ncMono L2
ENSG00000112282 MED23 586456 sc-eQTL 2.61e-01 -0.0991 0.088 0.575 ncMono L2
ENSG00000112299 VNN1 -499357 sc-eQTL 8.88e-02 -0.147 0.0858 0.575 ncMono L2
ENSG00000112303 VNN2 -548761 sc-eQTL 7.78e-01 -0.0234 0.0831 0.575 ncMono L2
ENSG00000112306 RPS12 -599871 sc-eQTL 3.52e-01 -0.0388 0.0416 0.575 ncMono L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 4.77e-01 0.0525 0.0736 0.575 ncMono L2
ENSG00000079950 STX7 -298500 sc-eQTL 5.53e-01 0.0428 0.072 0.579 pDC L2
ENSG00000093134 VNN3 -520067 sc-eQTL 7.98e-02 -0.127 0.0718 0.579 pDC L2
ENSG00000112282 MED23 586456 sc-eQTL 6.39e-01 -0.0475 0.101 0.579 pDC L2
ENSG00000112299 VNN1 -499357 sc-eQTL 7.60e-01 -0.0226 0.0738 0.579 pDC L2
ENSG00000112303 VNN2 -548761 sc-eQTL 2.74e-01 -0.0962 0.0875 0.579 pDC L2
ENSG00000112306 RPS12 -599871 sc-eQTL 9.99e-01 7.36e-05 0.0605 0.579 pDC L2
ENSG00000146409 SLC18B1 -598641 sc-eQTL 8.61e-01 0.0157 0.0896 0.579 pDC L2
ENSG00000286438 AL591115.1 -888430 sc-eQTL 3.73e-01 0.0765 0.0855 0.579 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 -186777 sc-eQTL 8.43e-01 0.0176 0.0886 0.575 B_Memory LOneK1K
ENSG00000079950 STX7 -298500 sc-eQTL 5.97e-01 0.0266 0.0502 0.575 B_Memory LOneK1K
ENSG00000112282 MED23 586456 sc-eQTL 2.43e-01 -0.0896 0.0766 0.575 B_Memory LOneK1K
ENSG00000112303 VNN2 -548761 sc-eQTL 7.01e-01 -0.0305 0.0794 0.575 B_Memory LOneK1K
ENSG00000112306 RPS12 -599871 sc-eQTL 3.04e-01 -0.0465 0.0451 0.575 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -598641 sc-eQTL 3.02e-01 0.0858 0.0828 0.575 B_Memory LOneK1K
ENSG00000228495 LINC01013 82810 sc-eQTL 9.52e-01 -0.00482 0.0801 0.575 B_Memory LOneK1K
ENSG00000079931 MOXD1 -186777 sc-eQTL 1.90e-02 -0.217 0.0919 0.575 B_Naive LOneK1K
ENSG00000079950 STX7 -298500 sc-eQTL 6.15e-02 0.0713 0.0379 0.575 B_Naive LOneK1K
ENSG00000112282 MED23 586456 sc-eQTL 4.50e-01 -0.0542 0.0716 0.575 B_Naive LOneK1K
ENSG00000112303 VNN2 -548761 sc-eQTL 5.51e-01 0.0442 0.0741 0.575 B_Naive LOneK1K
ENSG00000112306 RPS12 -599871 sc-eQTL 4.49e-02 -0.0897 0.0445 0.575 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -598641 sc-eQTL 1.93e-01 -0.11 0.0843 0.575 B_Naive LOneK1K
ENSG00000228495 LINC01013 82810 sc-eQTL 1.62e-01 -0.0751 0.0535 0.575 B_Naive LOneK1K
ENSG00000079950 STX7 -298500 sc-eQTL 1.77e-01 0.0642 0.0474 0.575 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -520067 sc-eQTL 6.41e-01 -0.0362 0.0775 0.575 CD14_Mono LOneK1K
ENSG00000112282 MED23 586456 sc-eQTL 1.44e-01 0.109 0.0742 0.575 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -499357 sc-eQTL 9.87e-01 -0.00133 0.0809 0.575 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -548761 sc-eQTL 3.96e-01 -0.0454 0.0534 0.575 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -599871 sc-eQTL 5.65e-02 -0.0698 0.0364 0.575 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -598641 sc-eQTL 7.36e-01 -0.0221 0.0653 0.575 CD14_Mono LOneK1K
ENSG00000079950 STX7 -298500 sc-eQTL 1.25e-01 0.0899 0.0584 0.571 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -520067 sc-eQTL 5.40e-01 -0.053 0.0863 0.571 CD16_Mono LOneK1K
ENSG00000112282 MED23 586456 sc-eQTL 1.64e-01 -0.117 0.0837 0.571 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -499357 sc-eQTL 1.73e-01 -0.116 0.0852 0.571 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -548761 sc-eQTL 4.05e-01 -0.0673 0.0806 0.571 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -599871 sc-eQTL 8.79e-01 -0.00524 0.0342 0.571 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -598641 sc-eQTL 1.87e-01 0.11 0.0828 0.571 CD16_Mono LOneK1K
ENSG00000079950 STX7 -298500 sc-eQTL 7.64e-01 0.0199 0.0663 0.571 NK_CD56dim LOneK1K
ENSG00000112282 MED23 586456 sc-eQTL 8.52e-01 0.012 0.0644 0.571 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -548761 sc-eQTL 1.96e-01 -0.108 0.0836 0.571 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -599871 sc-eQTL 9.66e-01 0.00145 0.0343 0.571 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 -520067 eQTL 0.0193 -0.0353 0.0151 0.0 0.0 0.384
ENSG00000118523 CCN2 263326 pQTL 0.00127 -0.069 0.0214 0.0 0.0 0.395
ENSG00000234484 AL032821.1 -537977 eQTL 0.0462 0.0642 0.0322 0.0 0.0 0.384

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 \N -298500 1.25e-06 9.37e-07 2.62e-07 3.54e-07 1.19e-07 3.12e-07 8.7e-07 2.71e-07 8.46e-07 2.72e-07 1.12e-06 5.51e-07 1.33e-06 2.08e-07 4.03e-07 4.91e-07 7.47e-07 5.31e-07 3.43e-07 3.42e-07 2.89e-07 6.91e-07 6.33e-07 4.38e-07 1.66e-06 2.55e-07 5.05e-07 4.94e-07 8.16e-07 9.11e-07 4.61e-07 3.82e-08 1.32e-07 2.98e-07 3.35e-07 3.02e-07 2.36e-07 1.55e-07 1.55e-07 9.81e-09 2.71e-07 1.15e-06 6.18e-08 4.16e-08 1.93e-07 4.53e-08 1.7e-07 8.97e-08 6.27e-08
ENSG00000093134 VNN3 -520067 3.62e-07 2.17e-07 6.57e-08 2.43e-07 1.07e-07 9.31e-08 2.86e-07 6.2e-08 1.89e-07 1.11e-07 2.04e-07 1.52e-07 2.74e-07 8.55e-08 6.53e-08 9.35e-08 6.17e-08 2.21e-07 7.42e-08 6.73e-08 1.33e-07 1.9e-07 1.89e-07 3.41e-08 2.74e-07 1.65e-07 1.25e-07 1.44e-07 1.48e-07 1.39e-07 1.27e-07 4.75e-08 4.74e-08 1.01e-07 7.44e-08 3.94e-08 6.04e-08 5.71e-08 5.8e-08 7.92e-08 3.17e-08 1.79e-07 3.4e-08 1.76e-08 4.99e-08 9.44e-09 9.1e-08 0.0 4.47e-08
ENSG00000228495 \N 82783 4.8e-06 5.07e-06 7.29e-07 3.1e-06 1.61e-06 1.58e-06 5.71e-06 1.04e-06 5.13e-06 2.5e-06 6.04e-06 3.27e-06 7.66e-06 1.94e-06 1.31e-06 3.73e-06 1.97e-06 3.85e-06 1.5e-06 1.15e-06 2.71e-06 5e-06 4.64e-06 1.68e-06 7.98e-06 2.01e-06 2.41e-06 1.81e-06 4.47e-06 5.03e-06 2.85e-06 4.02e-07 5.55e-07 1.84e-06 2.03e-06 1.15e-06 1.09e-06 4.51e-07 8.84e-07 5.17e-07 7.37e-07 6.1e-06 4.02e-07 1.49e-07 6.07e-07 1.14e-06 1.13e-06 7.5e-07 4.53e-07