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Genes within 1Mb (chr6:132214214:T:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 -187261 sc-eQTL 3.33e-01 -0.0876 0.0902 0.575 B L1
ENSG00000079950 STX7 -298984 sc-eQTL 4.16e-02 0.0692 0.0338 0.575 B L1
ENSG00000112282 MED23 585972 sc-eQTL 4.37e-01 -0.0529 0.0679 0.575 B L1
ENSG00000112303 VNN2 -549245 sc-eQTL 3.20e-01 0.0638 0.064 0.575 B L1
ENSG00000112306 RPS12 -600355 sc-eQTL 1.24e-01 -0.0595 0.0385 0.575 B L1
ENSG00000146409 SLC18B1 -599125 sc-eQTL 9.78e-01 -0.0022 0.0816 0.575 B L1
ENSG00000228495 LINC01013 82326 sc-eQTL 2.13e-01 -0.0666 0.0533 0.575 B L1
ENSG00000079950 STX7 -298984 sc-eQTL 9.63e-01 -0.00303 0.0651 0.575 CD4T L1
ENSG00000112282 MED23 585972 sc-eQTL 7.71e-01 -0.0151 0.0517 0.575 CD4T L1
ENSG00000112303 VNN2 -549245 sc-eQTL 6.90e-01 -0.0225 0.0564 0.575 CD4T L1
ENSG00000112306 RPS12 -600355 sc-eQTL 3.88e-01 -0.0331 0.0383 0.575 CD4T L1
ENSG00000146409 SLC18B1 -599125 sc-eQTL 9.50e-03 0.2 0.0763 0.575 CD4T L1
ENSG00000079950 STX7 -298984 sc-eQTL 6.11e-01 0.0327 0.0642 0.575 CD8T L1
ENSG00000112282 MED23 585972 sc-eQTL 2.83e-01 0.068 0.0631 0.575 CD8T L1
ENSG00000112303 VNN2 -549245 sc-eQTL 2.52e-01 0.0859 0.0748 0.575 CD8T L1
ENSG00000112306 RPS12 -600355 sc-eQTL 1.46e-01 -0.0372 0.0255 0.575 CD8T L1
ENSG00000146409 SLC18B1 -599125 sc-eQTL 9.47e-01 -0.00511 0.0775 0.575 CD8T L1
ENSG00000079950 STX7 -298984 sc-eQTL 1.90e-01 0.0784 0.0596 0.57 DC L1
ENSG00000093134 VNN3 -520551 sc-eQTL 8.58e-01 -0.0133 0.0743 0.57 DC L1
ENSG00000112282 MED23 585972 sc-eQTL 5.27e-01 -0.0552 0.0871 0.57 DC L1
ENSG00000112299 VNN1 -499841 sc-eQTL 4.24e-01 -0.0642 0.08 0.57 DC L1
ENSG00000112303 VNN2 -549245 sc-eQTL 4.58e-01 0.0637 0.0857 0.57 DC L1
ENSG00000112306 RPS12 -600355 sc-eQTL 4.66e-01 -0.0351 0.048 0.57 DC L1
ENSG00000146409 SLC18B1 -599125 sc-eQTL 9.80e-01 0.00195 0.0761 0.57 DC L1
ENSG00000286438 AL591115.1 -888914 sc-eQTL 7.65e-01 0.0207 0.0693 0.57 DC L1
ENSG00000079950 STX7 -298984 sc-eQTL 7.83e-02 0.0778 0.044 0.575 Mono L1
ENSG00000093134 VNN3 -520551 sc-eQTL 4.86e-01 -0.0531 0.076 0.575 Mono L1
ENSG00000112282 MED23 585972 sc-eQTL 5.86e-01 0.0394 0.0722 0.575 Mono L1
ENSG00000112299 VNN1 -499841 sc-eQTL 7.08e-01 -0.0307 0.0818 0.575 Mono L1
ENSG00000112303 VNN2 -549245 sc-eQTL 3.96e-01 -0.0491 0.0577 0.575 Mono L1
ENSG00000112306 RPS12 -600355 sc-eQTL 1.37e-01 -0.0514 0.0344 0.575 Mono L1
ENSG00000146409 SLC18B1 -599125 sc-eQTL 8.32e-01 -0.0146 0.0685 0.575 Mono L1
ENSG00000079950 STX7 -298984 sc-eQTL 6.64e-01 0.0287 0.0659 0.573 NK L1
ENSG00000112282 MED23 585972 sc-eQTL 6.98e-01 -0.0234 0.0602 0.573 NK L1
ENSG00000112303 VNN2 -549245 sc-eQTL 1.38e-01 -0.121 0.0816 0.573 NK L1
ENSG00000112306 RPS12 -600355 sc-eQTL 8.25e-01 -0.00751 0.0339 0.573 NK L1
ENSG00000079950 STX7 -298984 sc-eQTL 2.43e-01 0.0787 0.0672 0.575 Other_T L1
ENSG00000112282 MED23 585972 sc-eQTL 7.86e-01 0.0229 0.0842 0.575 Other_T L1
ENSG00000112303 VNN2 -549245 sc-eQTL 7.86e-01 0.0222 0.0815 0.575 Other_T L1
ENSG00000112306 RPS12 -600355 sc-eQTL 6.30e-01 0.0156 0.0323 0.575 Other_T L1
ENSG00000146409 SLC18B1 -599125 sc-eQTL 6.72e-01 -0.0375 0.0885 0.575 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 -187261 sc-eQTL 1.30e-01 0.141 0.0924 0.561 B_Activated L2
ENSG00000079950 STX7 -298984 sc-eQTL 8.79e-01 -0.0133 0.0872 0.561 B_Activated L2
ENSG00000112282 MED23 585972 sc-eQTL 6.62e-01 -0.0423 0.0966 0.561 B_Activated L2
ENSG00000112303 VNN2 -549245 sc-eQTL 5.87e-02 -0.175 0.0919 0.561 B_Activated L2
ENSG00000112306 RPS12 -600355 sc-eQTL 7.62e-01 -0.0151 0.0497 0.561 B_Activated L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 9.47e-01 0.00579 0.0872 0.561 B_Activated L2
ENSG00000228495 LINC01013 82326 sc-eQTL 4.47e-02 0.166 0.0821 0.561 B_Activated L2
ENSG00000079931 MOXD1 -187261 sc-eQTL 5.96e-01 -0.0444 0.0835 0.575 B_Intermediate L2
ENSG00000079950 STX7 -298984 sc-eQTL 3.86e-01 0.0474 0.0546 0.575 B_Intermediate L2
ENSG00000112282 MED23 585972 sc-eQTL 3.80e-01 -0.073 0.083 0.575 B_Intermediate L2
ENSG00000112303 VNN2 -549245 sc-eQTL 3.05e-01 -0.0845 0.0821 0.575 B_Intermediate L2
ENSG00000112306 RPS12 -600355 sc-eQTL 1.76e-01 -0.0681 0.0502 0.575 B_Intermediate L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 6.26e-01 0.0443 0.0908 0.575 B_Intermediate L2
ENSG00000228495 LINC01013 82326 sc-eQTL 4.87e-01 -0.0537 0.0771 0.575 B_Intermediate L2
ENSG00000079931 MOXD1 -187261 sc-eQTL 1.37e-01 -0.124 0.0829 0.575 B_Memory L2
ENSG00000079950 STX7 -298984 sc-eQTL 3.89e-01 0.0564 0.0653 0.575 B_Memory L2
ENSG00000112282 MED23 585972 sc-eQTL 4.93e-01 -0.0577 0.0841 0.575 B_Memory L2
ENSG00000112303 VNN2 -549245 sc-eQTL 9.09e-01 0.00982 0.0855 0.575 B_Memory L2
ENSG00000112306 RPS12 -600355 sc-eQTL 8.38e-02 -0.0711 0.0409 0.575 B_Memory L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 7.41e-01 0.0285 0.086 0.575 B_Memory L2
ENSG00000228495 LINC01013 82326 sc-eQTL 1.27e-02 -0.198 0.0789 0.575 B_Memory L2
ENSG00000079931 MOXD1 -187261 sc-eQTL 6.30e-02 -0.172 0.092 0.575 B_Naive1 L2
ENSG00000079950 STX7 -298984 sc-eQTL 2.86e-02 0.0883 0.0401 0.575 B_Naive1 L2
ENSG00000112282 MED23 585972 sc-eQTL 2.59e-01 -0.0819 0.0724 0.575 B_Naive1 L2
ENSG00000112303 VNN2 -549245 sc-eQTL 5.44e-01 0.0478 0.0786 0.575 B_Naive1 L2
ENSG00000112306 RPS12 -600355 sc-eQTL 6.69e-02 -0.0819 0.0445 0.575 B_Naive1 L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 6.82e-01 -0.0355 0.0865 0.575 B_Naive1 L2
ENSG00000228495 LINC01013 82326 sc-eQTL 5.79e-01 -0.0318 0.0572 0.575 B_Naive1 L2
ENSG00000079931 MOXD1 -187261 sc-eQTL 3.59e-02 -0.182 0.0862 0.573 B_Naive2 L2
ENSG00000079950 STX7 -298984 sc-eQTL 1.97e-01 0.0612 0.0473 0.573 B_Naive2 L2
ENSG00000112282 MED23 585972 sc-eQTL 5.20e-01 0.0564 0.0876 0.573 B_Naive2 L2
ENSG00000112303 VNN2 -549245 sc-eQTL 9.30e-01 0.0077 0.0872 0.573 B_Naive2 L2
ENSG00000112306 RPS12 -600355 sc-eQTL 2.93e-02 -0.1 0.0456 0.573 B_Naive2 L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 7.35e-02 -0.157 0.0874 0.573 B_Naive2 L2
ENSG00000228495 LINC01013 82326 sc-eQTL 3.55e-02 -0.128 0.0604 0.573 B_Naive2 L2
ENSG00000079950 STX7 -298984 sc-eQTL 7.35e-01 -0.0298 0.0879 0.577 CD4_CTL L2
ENSG00000112282 MED23 585972 sc-eQTL 7.17e-01 0.0332 0.0914 0.577 CD4_CTL L2
ENSG00000112303 VNN2 -549245 sc-eQTL 7.17e-01 0.0321 0.0887 0.577 CD4_CTL L2
ENSG00000112306 RPS12 -600355 sc-eQTL 4.16e-01 -0.0333 0.0409 0.577 CD4_CTL L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 6.14e-01 0.0417 0.0826 0.577 CD4_CTL L2
ENSG00000079950 STX7 -298984 sc-eQTL 8.61e-01 0.0124 0.0703 0.575 CD4_Naive L2
ENSG00000112282 MED23 585972 sc-eQTL 6.66e-01 0.0259 0.06 0.575 CD4_Naive L2
ENSG00000112303 VNN2 -549245 sc-eQTL 7.53e-01 0.0205 0.0651 0.575 CD4_Naive L2
ENSG00000112306 RPS12 -600355 sc-eQTL 3.21e-01 -0.0419 0.0422 0.575 CD4_Naive L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 1.02e-02 0.207 0.0801 0.575 CD4_Naive L2
ENSG00000079950 STX7 -298984 sc-eQTL 5.02e-01 0.0518 0.077 0.575 CD4_TCM L2
ENSG00000112282 MED23 585972 sc-eQTL 3.93e-01 -0.0554 0.0647 0.575 CD4_TCM L2
ENSG00000112303 VNN2 -549245 sc-eQTL 2.95e-01 -0.0795 0.0758 0.575 CD4_TCM L2
ENSG00000112306 RPS12 -600355 sc-eQTL 1.57e-01 -0.0557 0.0392 0.575 CD4_TCM L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 3.10e-03 0.267 0.0893 0.575 CD4_TCM L2
ENSG00000079950 STX7 -298984 sc-eQTL 6.29e-01 -0.0436 0.0901 0.575 CD4_TEM L2
ENSG00000112282 MED23 585972 sc-eQTL 5.68e-01 0.0475 0.083 0.575 CD4_TEM L2
ENSG00000112303 VNN2 -549245 sc-eQTL 2.25e-01 -0.105 0.0862 0.575 CD4_TEM L2
ENSG00000112306 RPS12 -600355 sc-eQTL 1.36e-01 -0.0529 0.0353 0.575 CD4_TEM L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 9.18e-02 0.148 0.0876 0.575 CD4_TEM L2
ENSG00000079950 STX7 -298984 sc-eQTL 4.67e-02 0.146 0.0731 0.575 CD8_CTL L2
ENSG00000112282 MED23 585972 sc-eQTL 7.73e-01 0.0218 0.0756 0.575 CD8_CTL L2
ENSG00000112303 VNN2 -549245 sc-eQTL 2.37e-01 0.099 0.0835 0.575 CD8_CTL L2
ENSG00000112306 RPS12 -600355 sc-eQTL 4.26e-01 -0.0357 0.0448 0.575 CD8_CTL L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 1.95e-01 0.113 0.0865 0.575 CD8_CTL L2
ENSG00000079950 STX7 -298984 sc-eQTL 9.35e-01 0.00731 0.09 0.575 CD8_Naive L2
ENSG00000112282 MED23 585972 sc-eQTL 3.41e-01 0.0689 0.0722 0.575 CD8_Naive L2
ENSG00000112303 VNN2 -549245 sc-eQTL 3.54e-02 0.163 0.0768 0.575 CD8_Naive L2
ENSG00000112306 RPS12 -600355 sc-eQTL 7.12e-01 0.0164 0.0444 0.575 CD8_Naive L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 2.81e-01 -0.0962 0.0889 0.575 CD8_Naive L2
ENSG00000079950 STX7 -298984 sc-eQTL 4.21e-01 -0.0737 0.0913 0.574 CD8_TCM L2
ENSG00000112282 MED23 585972 sc-eQTL 6.90e-01 -0.0366 0.0917 0.574 CD8_TCM L2
ENSG00000112303 VNN2 -549245 sc-eQTL 1.87e-01 -0.12 0.0903 0.574 CD8_TCM L2
ENSG00000112306 RPS12 -600355 sc-eQTL 6.30e-01 -0.0213 0.0442 0.574 CD8_TCM L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 7.71e-01 0.0282 0.0969 0.574 CD8_TCM L2
ENSG00000079950 STX7 -298984 sc-eQTL 5.50e-01 -0.057 0.0951 0.582 CD8_TEM L2
ENSG00000112282 MED23 585972 sc-eQTL 2.72e-01 -0.101 0.0914 0.582 CD8_TEM L2
ENSG00000112303 VNN2 -549245 sc-eQTL 4.49e-01 0.0717 0.0945 0.582 CD8_TEM L2
ENSG00000112306 RPS12 -600355 sc-eQTL 4.91e-01 -0.0351 0.0509 0.582 CD8_TEM L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 1.09e-01 0.154 0.0957 0.582 CD8_TEM L2
ENSG00000079950 STX7 -298984 sc-eQTL 7.49e-01 0.0273 0.0852 0.576 MAIT L2
ENSG00000112282 MED23 585972 sc-eQTL 8.77e-01 0.0138 0.0891 0.576 MAIT L2
ENSG00000112303 VNN2 -549245 sc-eQTL 4.16e-01 0.0706 0.0865 0.576 MAIT L2
ENSG00000112306 RPS12 -600355 sc-eQTL 4.38e-01 -0.0331 0.0426 0.576 MAIT L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 7.47e-01 0.0289 0.0894 0.576 MAIT L2
ENSG00000079950 STX7 -298984 sc-eQTL 3.13e-01 0.0906 0.0895 0.58 NK_CD56bright L2
ENSG00000112282 MED23 585972 sc-eQTL 8.53e-01 0.0177 0.0949 0.58 NK_CD56bright L2
ENSG00000112303 VNN2 -549245 sc-eQTL 7.99e-01 -0.0232 0.0911 0.58 NK_CD56bright L2
ENSG00000112306 RPS12 -600355 sc-eQTL 2.57e-01 -0.0575 0.0506 0.58 NK_CD56bright L2
ENSG00000079950 STX7 -298984 sc-eQTL 9.53e-01 -0.0042 0.0713 0.571 NK_CD56dim L2
ENSG00000112282 MED23 585972 sc-eQTL 4.63e-01 -0.0539 0.0732 0.571 NK_CD56dim L2
ENSG00000112303 VNN2 -549245 sc-eQTL 2.56e-01 -0.101 0.089 0.571 NK_CD56dim L2
ENSG00000112306 RPS12 -600355 sc-eQTL 9.19e-01 -0.0036 0.0354 0.571 NK_CD56dim L2
ENSG00000079950 STX7 -298984 sc-eQTL 4.38e-01 -0.0686 0.0882 0.578 NK_HLA L2
ENSG00000112282 MED23 585972 sc-eQTL 1.39e-01 0.132 0.0888 0.578 NK_HLA L2
ENSG00000112303 VNN2 -549245 sc-eQTL 9.03e-01 0.0109 0.0895 0.578 NK_HLA L2
ENSG00000112306 RPS12 -600355 sc-eQTL 3.61e-01 -0.0381 0.0416 0.578 NK_HLA L2
ENSG00000079950 STX7 -298984 sc-eQTL 8.05e-01 -0.0192 0.0775 0.571 NK_cytokine L2
ENSG00000112282 MED23 585972 sc-eQTL 7.20e-01 -0.0287 0.0801 0.571 NK_cytokine L2
ENSG00000112303 VNN2 -549245 sc-eQTL 4.99e-01 -0.0589 0.087 0.571 NK_cytokine L2
ENSG00000112306 RPS12 -600355 sc-eQTL 9.86e-01 -0.00086 0.0473 0.571 NK_cytokine L2
ENSG00000079931 MOXD1 -187261 sc-eQTL 6.47e-01 0.043 0.0938 0.574 PB L2
ENSG00000079950 STX7 -298984 sc-eQTL 8.32e-01 0.0166 0.0784 0.574 PB L2
ENSG00000112282 MED23 585972 sc-eQTL 4.92e-01 0.0733 0.106 0.574 PB L2
ENSG00000112303 VNN2 -549245 sc-eQTL 2.81e-01 0.103 0.0953 0.574 PB L2
ENSG00000112306 RPS12 -600355 sc-eQTL 5.85e-01 -0.0298 0.0543 0.574 PB L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 4.01e-01 0.0856 0.102 0.574 PB L2
ENSG00000228495 LINC01013 82326 sc-eQTL 5.49e-01 -0.0402 0.0669 0.574 PB L2
ENSG00000079950 STX7 -298984 sc-eQTL 6.89e-02 0.146 0.0798 0.578 Pro_T L2
ENSG00000112282 MED23 585972 sc-eQTL 5.34e-02 -0.174 0.0897 0.578 Pro_T L2
ENSG00000112303 VNN2 -549245 sc-eQTL 4.28e-01 -0.0684 0.0862 0.578 Pro_T L2
ENSG00000112306 RPS12 -600355 sc-eQTL 4.42e-02 0.0654 0.0323 0.578 Pro_T L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 1.59e-01 -0.119 0.0841 0.578 Pro_T L2
ENSG00000079950 STX7 -298984 sc-eQTL 3.03e-01 0.0891 0.0863 0.575 Treg L2
ENSG00000112282 MED23 585972 sc-eQTL 5.92e-02 -0.167 0.0881 0.575 Treg L2
ENSG00000112303 VNN2 -549245 sc-eQTL 6.46e-01 0.0334 0.0727 0.575 Treg L2
ENSG00000112306 RPS12 -600355 sc-eQTL 3.30e-01 -0.0313 0.0321 0.575 Treg L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 2.16e-01 0.112 0.0906 0.575 Treg L2
ENSG00000079950 STX7 -298984 sc-eQTL 1.75e-01 0.104 0.0765 0.573 cDC L2
ENSG00000093134 VNN3 -520551 sc-eQTL 5.84e-01 0.0419 0.0763 0.573 cDC L2
ENSG00000112282 MED23 585972 sc-eQTL 2.60e-01 -0.112 0.099 0.573 cDC L2
ENSG00000112299 VNN1 -499841 sc-eQTL 3.82e-01 -0.0785 0.0896 0.573 cDC L2
ENSG00000112303 VNN2 -549245 sc-eQTL 1.54e-01 0.125 0.087 0.573 cDC L2
ENSG00000112306 RPS12 -600355 sc-eQTL 7.25e-01 -0.0152 0.0432 0.573 cDC L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 8.15e-01 -0.02 0.0855 0.573 cDC L2
ENSG00000286438 AL591115.1 -888914 sc-eQTL 4.61e-01 -0.0505 0.0683 0.573 cDC L2
ENSG00000079950 STX7 -298984 sc-eQTL 9.25e-02 0.0959 0.0568 0.575 cMono_IL1B L2
ENSG00000093134 VNN3 -520551 sc-eQTL 4.94e-01 -0.0553 0.0807 0.575 cMono_IL1B L2
ENSG00000112282 MED23 585972 sc-eQTL 4.22e-01 0.0641 0.0797 0.575 cMono_IL1B L2
ENSG00000112299 VNN1 -499841 sc-eQTL 9.33e-01 0.00689 0.0815 0.575 cMono_IL1B L2
ENSG00000112303 VNN2 -549245 sc-eQTL 4.47e-01 -0.0496 0.0651 0.575 cMono_IL1B L2
ENSG00000112306 RPS12 -600355 sc-eQTL 7.97e-02 -0.0633 0.0359 0.575 cMono_IL1B L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 5.95e-01 -0.0372 0.0698 0.575 cMono_IL1B L2
ENSG00000079950 STX7 -298984 sc-eQTL 8.73e-01 0.00995 0.0623 0.575 cMono_S100A L2
ENSG00000093134 VNN3 -520551 sc-eQTL 9.60e-01 0.00388 0.0778 0.575 cMono_S100A L2
ENSG00000112282 MED23 585972 sc-eQTL 2.82e-01 0.0907 0.0842 0.575 cMono_S100A L2
ENSG00000112299 VNN1 -499841 sc-eQTL 2.41e-01 -0.099 0.0842 0.575 cMono_S100A L2
ENSG00000112303 VNN2 -549245 sc-eQTL 4.00e-01 -0.0466 0.0552 0.575 cMono_S100A L2
ENSG00000112306 RPS12 -600355 sc-eQTL 5.22e-01 -0.0255 0.0398 0.575 cMono_S100A L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 9.13e-01 0.00808 0.0737 0.575 cMono_S100A L2
ENSG00000079950 STX7 -298984 sc-eQTL 8.81e-01 0.0155 0.103 0.591 gdT L2
ENSG00000112282 MED23 585972 sc-eQTL 9.85e-01 -0.00201 0.11 0.591 gdT L2
ENSG00000112303 VNN2 -549245 sc-eQTL 1.33e-01 0.17 0.113 0.591 gdT L2
ENSG00000112306 RPS12 -600355 sc-eQTL 5.82e-01 -0.0239 0.0433 0.591 gdT L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 7.07e-01 -0.0421 0.112 0.591 gdT L2
ENSG00000079950 STX7 -298984 sc-eQTL 2.42e-01 0.0971 0.0826 0.564 intMono L2
ENSG00000093134 VNN3 -520551 sc-eQTL 7.66e-01 0.0249 0.0837 0.564 intMono L2
ENSG00000112282 MED23 585972 sc-eQTL 2.43e-01 -0.107 0.0916 0.564 intMono L2
ENSG00000112299 VNN1 -499841 sc-eQTL 9.83e-01 -0.00172 0.0828 0.564 intMono L2
ENSG00000112303 VNN2 -549245 sc-eQTL 5.25e-01 -0.0535 0.084 0.564 intMono L2
ENSG00000112306 RPS12 -600355 sc-eQTL 6.68e-01 -0.0157 0.0366 0.564 intMono L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 3.04e-01 0.0915 0.0889 0.564 intMono L2
ENSG00000079950 STX7 -298984 sc-eQTL 7.39e-01 0.0205 0.0617 0.575 ncMono L2
ENSG00000093134 VNN3 -520551 sc-eQTL 7.91e-01 -0.0231 0.0871 0.575 ncMono L2
ENSG00000112282 MED23 585972 sc-eQTL 2.61e-01 -0.0991 0.088 0.575 ncMono L2
ENSG00000112299 VNN1 -499841 sc-eQTL 8.88e-02 -0.147 0.0858 0.575 ncMono L2
ENSG00000112303 VNN2 -549245 sc-eQTL 7.78e-01 -0.0234 0.0831 0.575 ncMono L2
ENSG00000112306 RPS12 -600355 sc-eQTL 3.52e-01 -0.0388 0.0416 0.575 ncMono L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 4.77e-01 0.0525 0.0736 0.575 ncMono L2
ENSG00000079950 STX7 -298984 sc-eQTL 5.53e-01 0.0428 0.072 0.579 pDC L2
ENSG00000093134 VNN3 -520551 sc-eQTL 7.98e-02 -0.127 0.0718 0.579 pDC L2
ENSG00000112282 MED23 585972 sc-eQTL 6.39e-01 -0.0475 0.101 0.579 pDC L2
ENSG00000112299 VNN1 -499841 sc-eQTL 7.60e-01 -0.0226 0.0738 0.579 pDC L2
ENSG00000112303 VNN2 -549245 sc-eQTL 2.74e-01 -0.0962 0.0875 0.579 pDC L2
ENSG00000112306 RPS12 -600355 sc-eQTL 9.99e-01 7.36e-05 0.0605 0.579 pDC L2
ENSG00000146409 SLC18B1 -599125 sc-eQTL 8.61e-01 0.0157 0.0896 0.579 pDC L2
ENSG00000286438 AL591115.1 -888914 sc-eQTL 3.73e-01 0.0765 0.0855 0.579 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079931 MOXD1 -187261 sc-eQTL 8.43e-01 0.0176 0.0886 0.575 B_Memory LOneK1K
ENSG00000079950 STX7 -298984 sc-eQTL 5.97e-01 0.0266 0.0502 0.575 B_Memory LOneK1K
ENSG00000112282 MED23 585972 sc-eQTL 2.43e-01 -0.0896 0.0766 0.575 B_Memory LOneK1K
ENSG00000112303 VNN2 -549245 sc-eQTL 7.01e-01 -0.0305 0.0794 0.575 B_Memory LOneK1K
ENSG00000112306 RPS12 -600355 sc-eQTL 3.04e-01 -0.0465 0.0451 0.575 B_Memory LOneK1K
ENSG00000146409 SLC18B1 -599125 sc-eQTL 3.02e-01 0.0858 0.0828 0.575 B_Memory LOneK1K
ENSG00000228495 LINC01013 82326 sc-eQTL 9.52e-01 -0.00482 0.0801 0.575 B_Memory LOneK1K
ENSG00000079931 MOXD1 -187261 sc-eQTL 1.90e-02 -0.217 0.0919 0.575 B_Naive LOneK1K
ENSG00000079950 STX7 -298984 sc-eQTL 6.15e-02 0.0713 0.0379 0.575 B_Naive LOneK1K
ENSG00000112282 MED23 585972 sc-eQTL 4.50e-01 -0.0542 0.0716 0.575 B_Naive LOneK1K
ENSG00000112303 VNN2 -549245 sc-eQTL 5.51e-01 0.0442 0.0741 0.575 B_Naive LOneK1K
ENSG00000112306 RPS12 -600355 sc-eQTL 4.49e-02 -0.0897 0.0445 0.575 B_Naive LOneK1K
ENSG00000146409 SLC18B1 -599125 sc-eQTL 1.93e-01 -0.11 0.0843 0.575 B_Naive LOneK1K
ENSG00000228495 LINC01013 82326 sc-eQTL 1.62e-01 -0.0751 0.0535 0.575 B_Naive LOneK1K
ENSG00000079950 STX7 -298984 sc-eQTL 1.77e-01 0.0642 0.0474 0.575 CD14_Mono LOneK1K
ENSG00000093134 VNN3 -520551 sc-eQTL 6.41e-01 -0.0362 0.0775 0.575 CD14_Mono LOneK1K
ENSG00000112282 MED23 585972 sc-eQTL 1.44e-01 0.109 0.0742 0.575 CD14_Mono LOneK1K
ENSG00000112299 VNN1 -499841 sc-eQTL 9.87e-01 -0.00133 0.0809 0.575 CD14_Mono LOneK1K
ENSG00000112303 VNN2 -549245 sc-eQTL 3.96e-01 -0.0454 0.0534 0.575 CD14_Mono LOneK1K
ENSG00000112306 RPS12 -600355 sc-eQTL 5.65e-02 -0.0698 0.0364 0.575 CD14_Mono LOneK1K
ENSG00000146409 SLC18B1 -599125 sc-eQTL 7.36e-01 -0.0221 0.0653 0.575 CD14_Mono LOneK1K
ENSG00000079950 STX7 -298984 sc-eQTL 1.25e-01 0.0899 0.0584 0.571 CD16_Mono LOneK1K
ENSG00000093134 VNN3 -520551 sc-eQTL 5.40e-01 -0.053 0.0863 0.571 CD16_Mono LOneK1K
ENSG00000112282 MED23 585972 sc-eQTL 1.64e-01 -0.117 0.0837 0.571 CD16_Mono LOneK1K
ENSG00000112299 VNN1 -499841 sc-eQTL 1.73e-01 -0.116 0.0852 0.571 CD16_Mono LOneK1K
ENSG00000112303 VNN2 -549245 sc-eQTL 4.05e-01 -0.0673 0.0806 0.571 CD16_Mono LOneK1K
ENSG00000112306 RPS12 -600355 sc-eQTL 8.79e-01 -0.00524 0.0342 0.571 CD16_Mono LOneK1K
ENSG00000146409 SLC18B1 -599125 sc-eQTL 1.87e-01 0.11 0.0828 0.571 CD16_Mono LOneK1K
ENSG00000079950 STX7 -298984 sc-eQTL 7.64e-01 0.0199 0.0663 0.571 NK_CD56dim LOneK1K
ENSG00000112282 MED23 585972 sc-eQTL 8.52e-01 0.012 0.0644 0.571 NK_CD56dim LOneK1K
ENSG00000112303 VNN2 -549245 sc-eQTL 1.96e-01 -0.108 0.0836 0.571 NK_CD56dim LOneK1K
ENSG00000112306 RPS12 -600355 sc-eQTL 9.66e-01 0.00145 0.0343 0.571 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000093134 VNN3 -520551 eQTL 0.0193 -0.0354 0.0151 0.0 0.0 0.385
ENSG00000118523 CCN2 262842 pQTL 0.00105 -0.0702 0.0214 0.0 0.0 0.396
ENSG00000234484 AL032821.1 -538461 eQTL 0.0426 0.0655 0.0322 0.0 0.0 0.385

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079950 \N -298984 1.25e-06 9.48e-07 2.56e-07 6.38e-07 3.57e-07 4.81e-07 1.22e-06 3.69e-07 1.32e-06 4.32e-07 1.41e-06 6.55e-07 1.99e-06 2.83e-07 5.23e-07 8.22e-07 8.37e-07 5.99e-07 7.55e-07 6.97e-07 6.13e-07 1.35e-06 8.96e-07 6.47e-07 1.97e-06 4.28e-07 8.68e-07 7.27e-07 1.24e-06 1.22e-06 5.48e-07 1.92e-07 1.89e-07 6.83e-07 5.46e-07 4.5e-07 4.77e-07 2.31e-07 3.34e-07 2.66e-07 2.72e-07 1.48e-06 1.08e-07 4.16e-08 1.54e-07 1.23e-07 2.15e-07 3.73e-08 1.56e-07
ENSG00000093134 VNN3 -520551 5.59e-07 2.88e-07 9.71e-08 2.61e-07 1.1e-07 1.57e-07 3.57e-07 9.78e-08 2.66e-07 1.7e-07 3.25e-07 2.8e-07 4.54e-07 9.15e-08 1.32e-07 1.61e-07 1.62e-07 2.96e-07 1.5e-07 8.11e-08 1.68e-07 2.63e-07 2.33e-07 1.03e-07 3.7e-07 2.29e-07 1.97e-07 1.85e-07 2.13e-07 2.75e-07 1.78e-07 7.6e-08 5.38e-08 1.18e-07 1.97e-07 6.33e-08 7.52e-08 7.75e-08 5.98e-08 7.39e-08 2.87e-08 2.6e-07 2.16e-08 2.03e-08 8.45e-08 1.37e-08 7.25e-08 3.35e-09 5.15e-08
ENSG00000228495 \N 82299 6.15e-06 7.76e-06 1.34e-06 3.82e-06 2.22e-06 2.66e-06 8.96e-06 1.69e-06 5.83e-06 4.13e-06 8.88e-06 4.15e-06 1.12e-05 3.18e-06 1.7e-06 5.5e-06 3.71e-06 4e-06 2.34e-06 2.59e-06 3.97e-06 7.66e-06 5.99e-06 2.87e-06 9.83e-06 2.79e-06 4.16e-06 2.64e-06 7.13e-06 7.69e-06 3.75e-06 7.89e-07 1.1e-06 2.91e-06 2.96e-06 2.06e-06 1.44e-06 1.46e-06 1.64e-06 1.02e-06 1.01e-06 8.09e-06 9.9e-07 1.38e-07 7.67e-07 1.32e-06 1.09e-06 6.88e-07 4.67e-07