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Genes within 1Mb (chr6:131490484:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 427162 sc-eQTL 4.98e-01 0.0435 0.0641 0.308 B L1
ENSG00000079931 MOXD1 -910991 sc-eQTL 3.32e-01 -0.0908 0.0933 0.308 B L1
ENSG00000112282 MED23 -137758 sc-eQTL 1.34e-02 0.173 0.0693 0.308 B L1
ENSG00000118507 AKAP7 355017 sc-eQTL 8.30e-01 -0.0179 0.0833 0.308 B L1
ENSG00000228495 LINC01013 -641404 sc-eQTL 8.20e-02 0.0961 0.055 0.308 B L1
ENSG00000079819 EPB41L2 427162 sc-eQTL 5.10e-01 -0.0553 0.0837 0.308 CD4T L1
ENSG00000112282 MED23 -137758 sc-eQTL 3.45e-01 0.0513 0.0541 0.308 CD4T L1
ENSG00000118507 AKAP7 355017 sc-eQTL 4.04e-02 -0.149 0.072 0.308 CD4T L1
ENSG00000112282 MED23 -137758 sc-eQTL 2.87e-03 0.192 0.0637 0.308 CD8T L1
ENSG00000118507 AKAP7 355017 sc-eQTL 7.80e-01 -0.0207 0.0741 0.308 CD8T L1
ENSG00000079819 EPB41L2 427162 sc-eQTL 3.11e-01 0.0701 0.069 0.295 DC L1
ENSG00000112282 MED23 -137758 sc-eQTL 7.63e-01 -0.0268 0.0889 0.295 DC L1
ENSG00000118507 AKAP7 355017 sc-eQTL 1.29e-02 -0.216 0.0861 0.295 DC L1
ENSG00000079819 EPB41L2 427162 sc-eQTL 7.75e-01 -0.0218 0.076 0.308 Mono L1
ENSG00000112282 MED23 -137758 sc-eQTL 6.23e-01 -0.0364 0.0738 0.308 Mono L1
ENSG00000118507 AKAP7 355017 sc-eQTL 6.70e-02 -0.134 0.0727 0.308 Mono L1
ENSG00000112282 MED23 -137758 sc-eQTL 3.65e-01 -0.057 0.0628 0.307 NK L1
ENSG00000118507 AKAP7 355017 sc-eQTL 8.60e-01 0.0133 0.0753 0.307 NK L1
ENSG00000079819 EPB41L2 427162 sc-eQTL 6.33e-01 0.0365 0.0762 0.308 Other_T L1
ENSG00000112282 MED23 -137758 sc-eQTL 8.64e-01 -0.0148 0.0862 0.308 Other_T L1
ENSG00000118507 AKAP7 355017 sc-eQTL 1.25e-01 -0.115 0.0749 0.308 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 427162 sc-eQTL 8.29e-01 0.0183 0.0846 0.311 B_Activated L2
ENSG00000079931 MOXD1 -910991 sc-eQTL 9.17e-01 -0.01 0.096 0.311 B_Activated L2
ENSG00000112282 MED23 -137758 sc-eQTL 6.14e-02 0.186 0.0988 0.311 B_Activated L2
ENSG00000118507 AKAP7 355017 sc-eQTL 2.09e-01 -0.125 0.099 0.311 B_Activated L2
ENSG00000228495 LINC01013 -641404 sc-eQTL 1.09e-01 0.137 0.0851 0.311 B_Activated L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 6.45e-01 -0.0403 0.0874 0.307 B_Intermediate L2
ENSG00000079931 MOXD1 -910991 sc-eQTL 2.09e-02 -0.194 0.0835 0.307 B_Intermediate L2
ENSG00000112282 MED23 -137758 sc-eQTL 1.20e-02 0.21 0.0829 0.307 B_Intermediate L2
ENSG00000118507 AKAP7 355017 sc-eQTL 5.65e-01 0.0493 0.0855 0.307 B_Intermediate L2
ENSG00000228495 LINC01013 -641404 sc-eQTL 4.53e-01 -0.0586 0.078 0.307 B_Intermediate L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 1.87e-01 0.108 0.0813 0.306 B_Memory L2
ENSG00000079931 MOXD1 -910991 sc-eQTL 9.73e-01 0.00292 0.0847 0.306 B_Memory L2
ENSG00000112282 MED23 -137758 sc-eQTL 4.48e-01 -0.065 0.0855 0.306 B_Memory L2
ENSG00000118507 AKAP7 355017 sc-eQTL 4.66e-02 -0.177 0.0883 0.306 B_Memory L2
ENSG00000228495 LINC01013 -641404 sc-eQTL 7.39e-01 0.0272 0.0814 0.306 B_Memory L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 9.51e-01 0.00432 0.0709 0.308 B_Naive1 L2
ENSG00000079931 MOXD1 -910991 sc-eQTL 6.21e-02 -0.179 0.0956 0.308 B_Naive1 L2
ENSG00000112282 MED23 -137758 sc-eQTL 3.91e-01 0.0648 0.0754 0.308 B_Naive1 L2
ENSG00000118507 AKAP7 355017 sc-eQTL 6.39e-01 0.0443 0.0944 0.308 B_Naive1 L2
ENSG00000228495 LINC01013 -641404 sc-eQTL 9.02e-01 0.00735 0.0596 0.308 B_Naive1 L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 1.49e-01 0.116 0.0802 0.307 B_Naive2 L2
ENSG00000079931 MOXD1 -910991 sc-eQTL 9.21e-01 0.00912 0.0914 0.307 B_Naive2 L2
ENSG00000112282 MED23 -137758 sc-eQTL 2.71e-02 0.202 0.0909 0.307 B_Naive2 L2
ENSG00000118507 AKAP7 355017 sc-eQTL 8.14e-01 -0.0227 0.0966 0.307 B_Naive2 L2
ENSG00000228495 LINC01013 -641404 sc-eQTL 1.83e-01 0.0851 0.0637 0.307 B_Naive2 L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 2.97e-01 0.0787 0.0753 0.295 CD4_CTL L2
ENSG00000112282 MED23 -137758 sc-eQTL 1.47e-03 0.304 0.0943 0.295 CD4_CTL L2
ENSG00000118507 AKAP7 355017 sc-eQTL 7.13e-01 0.0341 0.0927 0.295 CD4_CTL L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 4.91e-01 -0.0602 0.0872 0.308 CD4_Naive L2
ENSG00000112282 MED23 -137758 sc-eQTL 6.85e-01 0.0257 0.0632 0.308 CD4_Naive L2
ENSG00000118507 AKAP7 355017 sc-eQTL 4.33e-02 -0.166 0.0819 0.308 CD4_Naive L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 8.83e-01 -0.013 0.0881 0.308 CD4_TCM L2
ENSG00000112282 MED23 -137758 sc-eQTL 4.24e-01 0.0542 0.0676 0.308 CD4_TCM L2
ENSG00000118507 AKAP7 355017 sc-eQTL 9.35e-01 -0.00646 0.0785 0.308 CD4_TCM L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 2.91e-01 -0.0965 0.0912 0.308 CD4_TEM L2
ENSG00000112282 MED23 -137758 sc-eQTL 1.20e-01 -0.131 0.0837 0.308 CD4_TEM L2
ENSG00000118507 AKAP7 355017 sc-eQTL 2.01e-01 0.118 0.0922 0.308 CD4_TEM L2
ENSG00000112282 MED23 -137758 sc-eQTL 1.07e-03 0.249 0.0751 0.308 CD8_CTL L2
ENSG00000118507 AKAP7 355017 sc-eQTL 8.33e-01 0.0183 0.0862 0.308 CD8_CTL L2
ENSG00000112282 MED23 -137758 sc-eQTL 5.48e-01 0.0445 0.074 0.308 CD8_Naive L2
ENSG00000118507 AKAP7 355017 sc-eQTL 7.71e-01 -0.0243 0.0836 0.308 CD8_Naive L2
ENSG00000112282 MED23 -137758 sc-eQTL 7.06e-01 0.0347 0.0919 0.31 CD8_TCM L2
ENSG00000118507 AKAP7 355017 sc-eQTL 2.17e-01 0.122 0.0983 0.31 CD8_TCM L2
ENSG00000112282 MED23 -137758 sc-eQTL 2.34e-01 0.112 0.0937 0.301 CD8_TEM L2
ENSG00000118507 AKAP7 355017 sc-eQTL 9.91e-01 -0.00108 0.0956 0.301 CD8_TEM L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 6.79e-01 -0.0352 0.0852 0.301 MAIT L2
ENSG00000112282 MED23 -137758 sc-eQTL 5.35e-01 0.0576 0.0927 0.301 MAIT L2
ENSG00000118507 AKAP7 355017 sc-eQTL 1.71e-02 -0.217 0.0904 0.301 MAIT L2
ENSG00000112282 MED23 -137758 sc-eQTL 8.43e-01 0.0192 0.0968 0.3 NK_CD56bright L2
ENSG00000118507 AKAP7 355017 sc-eQTL 3.02e-01 0.0969 0.0937 0.3 NK_CD56bright L2
ENSG00000112282 MED23 -137758 sc-eQTL 2.37e-01 -0.0886 0.0748 0.308 NK_CD56dim L2
ENSG00000118507 AKAP7 355017 sc-eQTL 9.99e-01 -0.000125 0.0797 0.308 NK_CD56dim L2
ENSG00000112282 MED23 -137758 sc-eQTL 5.41e-01 -0.0563 0.0919 0.301 NK_HLA L2
ENSG00000118507 AKAP7 355017 sc-eQTL 8.03e-01 0.0238 0.0954 0.301 NK_HLA L2
ENSG00000112282 MED23 -137758 sc-eQTL 4.03e-01 -0.0696 0.0831 0.308 NK_cytokine L2
ENSG00000118507 AKAP7 355017 sc-eQTL 5.45e-01 0.0508 0.0839 0.308 NK_cytokine L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 5.40e-01 -0.0713 0.116 0.363 PB L2
ENSG00000079931 MOXD1 -910991 sc-eQTL 6.34e-02 -0.178 0.0951 0.363 PB L2
ENSG00000112282 MED23 -137758 sc-eQTL 6.09e-01 -0.0562 0.11 0.363 PB L2
ENSG00000118507 AKAP7 355017 sc-eQTL 6.19e-01 0.0531 0.107 0.363 PB L2
ENSG00000228495 LINC01013 -641404 sc-eQTL 1.80e-01 -0.0923 0.0684 0.363 PB L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 6.24e-01 0.0396 0.0806 0.304 Pro_T L2
ENSG00000112282 MED23 -137758 sc-eQTL 9.29e-01 0.00832 0.0938 0.304 Pro_T L2
ENSG00000118507 AKAP7 355017 sc-eQTL 5.39e-01 -0.0494 0.0803 0.304 Pro_T L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 3.20e-01 0.0877 0.088 0.308 Treg L2
ENSG00000112282 MED23 -137758 sc-eQTL 4.76e-01 -0.0647 0.0906 0.308 Treg L2
ENSG00000118507 AKAP7 355017 sc-eQTL 9.27e-03 -0.202 0.077 0.308 Treg L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 6.02e-01 0.0418 0.0799 0.295 cDC L2
ENSG00000112282 MED23 -137758 sc-eQTL 1.59e-01 0.144 0.102 0.295 cDC L2
ENSG00000118507 AKAP7 355017 sc-eQTL 9.55e-01 0.00562 0.0997 0.295 cDC L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 3.95e-01 -0.0705 0.0827 0.308 cMono_IL1B L2
ENSG00000112282 MED23 -137758 sc-eQTL 5.32e-01 -0.0509 0.0813 0.308 cMono_IL1B L2
ENSG00000118507 AKAP7 355017 sc-eQTL 6.74e-02 -0.145 0.0786 0.308 cMono_IL1B L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 4.69e-01 -0.062 0.0856 0.308 cMono_S100A L2
ENSG00000112282 MED23 -137758 sc-eQTL 7.21e-01 0.0304 0.085 0.308 cMono_S100A L2
ENSG00000118507 AKAP7 355017 sc-eQTL 2.15e-02 -0.19 0.0822 0.308 cMono_S100A L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 5.36e-01 0.0623 0.1 0.273 gdT L2
ENSG00000112282 MED23 -137758 sc-eQTL 7.77e-01 0.032 0.113 0.273 gdT L2
ENSG00000118507 AKAP7 355017 sc-eQTL 7.42e-01 0.0388 0.118 0.273 gdT L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 9.71e-01 0.00318 0.088 0.307 intMono L2
ENSG00000112282 MED23 -137758 sc-eQTL 5.45e-01 0.0573 0.0946 0.307 intMono L2
ENSG00000118507 AKAP7 355017 sc-eQTL 3.97e-01 -0.0782 0.0923 0.307 intMono L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 3.35e-01 -0.0819 0.0848 0.296 ncMono L2
ENSG00000112282 MED23 -137758 sc-eQTL 4.80e-01 -0.0654 0.0925 0.296 ncMono L2
ENSG00000118507 AKAP7 355017 sc-eQTL 9.75e-01 -0.00286 0.0898 0.296 ncMono L2
ENSG00000079819 EPB41L2 427162 sc-eQTL 7.30e-01 0.0354 0.102 0.297 pDC L2
ENSG00000112282 MED23 -137758 sc-eQTL 1.17e-01 -0.162 0.103 0.297 pDC L2
ENSG00000118507 AKAP7 355017 sc-eQTL 1.43e-01 -0.124 0.0839 0.297 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079819 EPB41L2 427162 sc-eQTL 9.36e-01 0.00637 0.0789 0.308 B_Memory LOneK1K
ENSG00000079931 MOXD1 -910991 sc-eQTL 3.34e-01 -0.0864 0.0892 0.308 B_Memory LOneK1K
ENSG00000112282 MED23 -137758 sc-eQTL 3.36e-02 0.164 0.0767 0.308 B_Memory LOneK1K
ENSG00000118507 AKAP7 355017 sc-eQTL 1.60e-01 -0.11 0.0784 0.308 B_Memory LOneK1K
ENSG00000228495 LINC01013 -641404 sc-eQTL 1.17e-01 0.126 0.0803 0.308 B_Memory LOneK1K
ENSG00000079819 EPB41L2 427162 sc-eQTL 2.91e-01 0.0712 0.0672 0.308 B_Naive LOneK1K
ENSG00000079931 MOXD1 -910991 sc-eQTL 1.38e-01 -0.143 0.0961 0.308 B_Naive LOneK1K
ENSG00000112282 MED23 -137758 sc-eQTL 2.30e-02 0.169 0.0736 0.308 B_Naive LOneK1K
ENSG00000118507 AKAP7 355017 sc-eQTL 7.54e-01 0.0294 0.0938 0.308 B_Naive LOneK1K
ENSG00000228495 LINC01013 -641404 sc-eQTL 2.62e-01 0.0627 0.0557 0.308 B_Naive LOneK1K
ENSG00000079819 EPB41L2 427162 sc-eQTL 2.01e-01 -0.101 0.0787 0.308 CD14_Mono LOneK1K
ENSG00000112282 MED23 -137758 sc-eQTL 7.71e-01 -0.0221 0.0761 0.308 CD14_Mono LOneK1K
ENSG00000118507 AKAP7 355017 sc-eQTL 4.61e-02 -0.148 0.074 0.308 CD14_Mono LOneK1K
ENSG00000079819 EPB41L2 427162 sc-eQTL 9.60e-01 0.00435 0.0858 0.306 CD16_Mono LOneK1K
ENSG00000112282 MED23 -137758 sc-eQTL 4.81e-01 -0.0615 0.0872 0.306 CD16_Mono LOneK1K
ENSG00000118507 AKAP7 355017 sc-eQTL 8.95e-02 -0.152 0.089 0.306 CD16_Mono LOneK1K
ENSG00000112282 MED23 -137758 sc-eQTL 2.63e-01 -0.0751 0.0669 0.308 NK_CD56dim LOneK1K
ENSG00000118507 AKAP7 355017 sc-eQTL 9.60e-01 0.00371 0.0741 0.308 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112282 MED23 -137758 eQTL 1.92e-09 -0.104 0.0171 0.0 0.0 0.329
ENSG00000118507 AKAP7 355017 eQTL 0.0498 -0.0425 0.0217 0.0 0.0 0.329
ENSG00000118520 ARG1 -82660 pQTL 4.72e-09 -0.0854 0.0145 0.00108 0.0 0.326
ENSG00000118520 ARG1 -82660 eQTL 3.65e-15 -0.149 0.0187 0.0 0.0 0.329

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112282 MED23 -137758 3.99e-06 3.99e-06 5.8e-07 1.86e-06 7.58e-07 8.28e-07 2.49e-06 8.98e-07 2.61e-06 1.42e-06 3.41e-06 1.91e-06 5.72e-06 1.37e-06 9.22e-07 2e-06 1.61e-06 2.08e-06 1.47e-06 1.2e-06 1.68e-06 3.47e-06 3.24e-06 1.64e-06 4.69e-06 1.24e-06 1.59e-06 1.72e-06 3.88e-06 3.3e-06 2e-06 4.34e-07 6.49e-07 1.68e-06 1.8e-06 9.19e-07 9.24e-07 4.37e-07 1.32e-06 3.82e-07 3.2e-07 4.22e-06 5.44e-07 1.68e-07 3.63e-07 3.49e-07 9e-07 2.07e-07 1.59e-07
ENSG00000118520 ARG1 -82660 5.66e-06 6.75e-06 6.33e-07 3.6e-06 1.46e-06 1.81e-06 8.18e-06 1.29e-06 4.6e-06 2.84e-06 7.78e-06 2.79e-06 1.03e-05 2.85e-06 9.65e-07 3.78e-06 2.94e-06 3.71e-06 1.63e-06 1.77e-06 2.55e-06 5.66e-06 4.97e-06 2.02e-06 9.17e-06 2.18e-06 2.55e-06 1.73e-06 6.21e-06 7.09e-06 3.39e-06 4.44e-07 7.77e-07 2.54e-06 1.99e-06 1.59e-06 1.12e-06 6.8e-07 1.4e-06 7.73e-07 8.22e-07 8.58e-06 6.74e-07 1.6e-07 7.75e-07 1.08e-06 1.16e-06 6.82e-07 5.44e-07
ENSG00000154269 \N -137958 3.99e-06 3.99e-06 5.59e-07 1.86e-06 7.91e-07 8.28e-07 2.49e-06 8.79e-07 2.61e-06 1.42e-06 3.39e-06 1.91e-06 5.56e-06 1.34e-06 9.22e-07 2e-06 1.59e-06 2.07e-06 1.47e-06 1.22e-06 1.64e-06 3.47e-06 3.24e-06 1.64e-06 4.69e-06 1.24e-06 1.57e-06 1.72e-06 3.88e-06 3.3e-06 2e-06 4.34e-07 6.49e-07 1.68e-06 1.8e-06 9.19e-07 9.24e-07 4.37e-07 1.34e-06 3.82e-07 3.2e-07 4.15e-06 5.43e-07 1.68e-07 3.63e-07 3.31e-07 9e-07 2.07e-07 1.58e-07