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Genes within 1Mb (chr12:94858312:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -359434 sc-eQTL 2.68e-02 -0.149 0.0666 0.545 B L1
ENSG00000057704 TMCC3 207755 sc-eQTL 3.64e-01 -0.0719 0.0791 0.545 B L1
ENSG00000111142 METAP2 -615208 sc-eQTL 2.91e-01 -0.0627 0.0592 0.545 B L1
ENSG00000120798 NR2C1 -215316 sc-eQTL 5.84e-01 0.041 0.0749 0.545 B L1
ENSG00000136014 USP44 -693164 sc-eQTL 7.30e-01 -0.0236 0.0684 0.545 B L1
ENSG00000136040 PLXNC1 709735 sc-eQTL 8.34e-01 -0.00942 0.0449 0.545 B L1
ENSG00000173588 CEP83 398324 sc-eQTL 3.31e-01 -0.0551 0.0566 0.545 B L1
ENSG00000180263 FGD6 -359170 sc-eQTL 8.13e-01 -0.0162 0.0685 0.545 B L1
ENSG00000184752 NDUFA12 -145436 sc-eQTL 9.87e-01 0.000521 0.0327 0.545 B L1
ENSG00000028203 VEZT -359434 sc-eQTL 8.80e-01 -0.00852 0.0563 0.545 CD4T L1
ENSG00000111142 METAP2 -615208 sc-eQTL 4.22e-01 -0.0393 0.0488 0.545 CD4T L1
ENSG00000120798 NR2C1 -215316 sc-eQTL 9.41e-01 0.00401 0.0544 0.545 CD4T L1
ENSG00000136014 USP44 -693164 sc-eQTL 1.10e-01 -0.119 0.0738 0.545 CD4T L1
ENSG00000136040 PLXNC1 709735 sc-eQTL 8.88e-01 0.00671 0.0478 0.545 CD4T L1
ENSG00000173588 CEP83 398324 sc-eQTL 1.08e-01 -0.0803 0.0497 0.545 CD4T L1
ENSG00000184752 NDUFA12 -145436 sc-eQTL 4.28e-03 -0.149 0.0515 0.545 CD4T L1
ENSG00000028203 VEZT -359434 sc-eQTL 9.94e-01 0.000485 0.0673 0.545 CD8T L1
ENSG00000057704 TMCC3 207755 sc-eQTL 7.36e-01 0.0153 0.0452 0.545 CD8T L1
ENSG00000111142 METAP2 -615208 sc-eQTL 9.76e-01 0.00172 0.0576 0.545 CD8T L1
ENSG00000120798 NR2C1 -215316 sc-eQTL 9.59e-01 0.00374 0.0733 0.545 CD8T L1
ENSG00000136014 USP44 -693164 sc-eQTL 3.49e-01 -0.0614 0.0654 0.545 CD8T L1
ENSG00000136040 PLXNC1 709735 sc-eQTL 1.88e-01 -0.0821 0.0621 0.545 CD8T L1
ENSG00000173588 CEP83 398324 sc-eQTL 6.75e-01 0.0245 0.0582 0.545 CD8T L1
ENSG00000184752 NDUFA12 -145436 sc-eQTL 5.70e-01 -0.0271 0.0476 0.545 CD8T L1
ENSG00000028203 VEZT -359434 sc-eQTL 5.30e-02 0.155 0.0798 0.541 DC L1
ENSG00000057704 TMCC3 207755 sc-eQTL 4.86e-01 -0.0595 0.0853 0.541 DC L1
ENSG00000111142 METAP2 -615208 sc-eQTL 6.97e-01 -0.033 0.0845 0.541 DC L1
ENSG00000120798 NR2C1 -215316 sc-eQTL 3.87e-01 -0.0708 0.0818 0.541 DC L1
ENSG00000136040 PLXNC1 709735 sc-eQTL 1.32e-01 0.115 0.076 0.541 DC L1
ENSG00000173588 CEP83 398324 sc-eQTL 7.62e-01 0.0206 0.068 0.541 DC L1
ENSG00000180263 FGD6 -359170 sc-eQTL 3.23e-01 -0.0748 0.0756 0.541 DC L1
ENSG00000184752 NDUFA12 -145436 sc-eQTL 1.20e-01 -0.099 0.0634 0.541 DC L1
ENSG00000028203 VEZT -359434 sc-eQTL 7.91e-01 -0.0194 0.0733 0.545 Mono L1
ENSG00000057704 TMCC3 207755 sc-eQTL 8.84e-01 0.0083 0.057 0.545 Mono L1
ENSG00000111142 METAP2 -615208 sc-eQTL 8.89e-01 0.00815 0.0584 0.545 Mono L1
ENSG00000120798 NR2C1 -215316 sc-eQTL 2.25e-01 -0.0843 0.0693 0.545 Mono L1
ENSG00000136040 PLXNC1 709735 sc-eQTL 8.37e-03 0.124 0.0465 0.545 Mono L1
ENSG00000173588 CEP83 398324 sc-eQTL 6.03e-01 -0.0364 0.0698 0.545 Mono L1
ENSG00000180263 FGD6 -359170 sc-eQTL 3.27e-02 -0.132 0.0615 0.545 Mono L1
ENSG00000184752 NDUFA12 -145436 sc-eQTL 3.42e-05 -0.182 0.0429 0.545 Mono L1
ENSG00000028203 VEZT -359434 sc-eQTL 2.98e-01 0.0767 0.0735 0.543 NK L1
ENSG00000057704 TMCC3 207755 sc-eQTL 1.42e-01 0.102 0.0691 0.543 NK L1
ENSG00000111142 METAP2 -615208 sc-eQTL 8.26e-01 0.0128 0.0583 0.543 NK L1
ENSG00000120798 NR2C1 -215316 sc-eQTL 3.10e-01 0.07 0.0689 0.543 NK L1
ENSG00000136040 PLXNC1 709735 sc-eQTL 7.05e-01 -0.0216 0.0569 0.543 NK L1
ENSG00000173588 CEP83 398324 sc-eQTL 2.63e-01 -0.0724 0.0644 0.543 NK L1
ENSG00000184752 NDUFA12 -145436 sc-eQTL 5.04e-03 -0.133 0.0468 0.543 NK L1
ENSG00000028203 VEZT -359434 sc-eQTL 6.03e-01 -0.0432 0.0828 0.545 Other_T L1
ENSG00000057704 TMCC3 207755 sc-eQTL 8.99e-01 -0.00896 0.0705 0.545 Other_T L1
ENSG00000074527 NTN4 -932840 sc-eQTL 7.79e-01 -0.0175 0.0624 0.545 Other_T L1
ENSG00000111142 METAP2 -615208 sc-eQTL 9.06e-02 0.109 0.064 0.545 Other_T L1
ENSG00000120798 NR2C1 -215316 sc-eQTL 4.52e-01 0.0605 0.0802 0.545 Other_T L1
ENSG00000136040 PLXNC1 709735 sc-eQTL 4.58e-01 0.0485 0.0651 0.545 Other_T L1
ENSG00000173588 CEP83 398324 sc-eQTL 4.28e-01 -0.0582 0.0733 0.545 Other_T L1
ENSG00000184752 NDUFA12 -145436 sc-eQTL 3.75e-02 -0.0846 0.0404 0.545 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -359434 sc-eQTL 7.79e-01 0.0257 0.0914 0.528 B_Activated L2
ENSG00000057704 TMCC3 207755 sc-eQTL 5.26e-01 -0.0495 0.0779 0.528 B_Activated L2
ENSG00000111142 METAP2 -615208 sc-eQTL 4.63e-01 0.0699 0.0952 0.528 B_Activated L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 7.80e-01 -0.0256 0.0914 0.528 B_Activated L2
ENSG00000136014 USP44 -693164 sc-eQTL 8.08e-01 0.017 0.0697 0.528 B_Activated L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 9.27e-01 0.00678 0.0737 0.528 B_Activated L2
ENSG00000173588 CEP83 398324 sc-eQTL 6.17e-01 0.0459 0.0916 0.528 B_Activated L2
ENSG00000180263 FGD6 -359170 sc-eQTL 1.30e-02 -0.159 0.0635 0.528 B_Activated L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 6.44e-01 0.0374 0.0808 0.528 B_Activated L2
ENSG00000028203 VEZT -359434 sc-eQTL 7.12e-02 -0.148 0.0816 0.543 B_Intermediate L2
ENSG00000057704 TMCC3 207755 sc-eQTL 5.41e-01 -0.0509 0.0831 0.543 B_Intermediate L2
ENSG00000111142 METAP2 -615208 sc-eQTL 9.16e-01 -0.00797 0.0759 0.543 B_Intermediate L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 3.64e-01 0.0756 0.0831 0.543 B_Intermediate L2
ENSG00000136014 USP44 -693164 sc-eQTL 5.51e-01 -0.0508 0.0852 0.543 B_Intermediate L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 9.55e-01 -0.00393 0.07 0.543 B_Intermediate L2
ENSG00000173588 CEP83 398324 sc-eQTL 3.33e-01 -0.0751 0.0774 0.543 B_Intermediate L2
ENSG00000180263 FGD6 -359170 sc-eQTL 5.18e-01 -0.0492 0.0761 0.543 B_Intermediate L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 8.81e-01 0.00947 0.063 0.543 B_Intermediate L2
ENSG00000028203 VEZT -359434 sc-eQTL 3.02e-01 -0.0892 0.0862 0.543 B_Memory L2
ENSG00000057704 TMCC3 207755 sc-eQTL 9.25e-01 0.00831 0.0877 0.543 B_Memory L2
ENSG00000111142 METAP2 -615208 sc-eQTL 7.21e-01 -0.0299 0.0838 0.543 B_Memory L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 2.50e-01 0.104 0.0899 0.543 B_Memory L2
ENSG00000136014 USP44 -693164 sc-eQTL 6.27e-01 -0.0391 0.0803 0.543 B_Memory L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 4.66e-01 -0.0495 0.0678 0.543 B_Memory L2
ENSG00000173588 CEP83 398324 sc-eQTL 8.53e-01 -0.0147 0.0792 0.543 B_Memory L2
ENSG00000180263 FGD6 -359170 sc-eQTL 4.30e-01 -0.0631 0.0798 0.543 B_Memory L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 4.86e-01 -0.0448 0.0642 0.543 B_Memory L2
ENSG00000028203 VEZT -359434 sc-eQTL 4.91e-02 -0.157 0.0791 0.545 B_Naive1 L2
ENSG00000057704 TMCC3 207755 sc-eQTL 7.81e-01 0.0224 0.0807 0.545 B_Naive1 L2
ENSG00000111142 METAP2 -615208 sc-eQTL 6.83e-02 -0.123 0.0674 0.545 B_Naive1 L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 7.52e-01 -0.0262 0.0828 0.545 B_Naive1 L2
ENSG00000136014 USP44 -693164 sc-eQTL 9.83e-01 0.00179 0.0817 0.545 B_Naive1 L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 7.05e-01 -0.026 0.0686 0.545 B_Naive1 L2
ENSG00000173588 CEP83 398324 sc-eQTL 3.36e-01 -0.0682 0.0707 0.545 B_Naive1 L2
ENSG00000180263 FGD6 -359170 sc-eQTL 9.56e-01 -0.00428 0.0776 0.545 B_Naive1 L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 5.60e-01 0.0264 0.0452 0.545 B_Naive1 L2
ENSG00000028203 VEZT -359434 sc-eQTL 3.34e-01 0.0838 0.0866 0.543 B_Naive2 L2
ENSG00000057704 TMCC3 207755 sc-eQTL 1.34e-02 -0.195 0.0782 0.543 B_Naive2 L2
ENSG00000111142 METAP2 -615208 sc-eQTL 7.34e-01 0.0273 0.0802 0.543 B_Naive2 L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 3.31e-01 -0.0852 0.0876 0.543 B_Naive2 L2
ENSG00000136014 USP44 -693164 sc-eQTL 8.55e-01 -0.0147 0.0802 0.543 B_Naive2 L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 4.37e-01 0.0577 0.0741 0.543 B_Naive2 L2
ENSG00000173588 CEP83 398324 sc-eQTL 4.09e-01 -0.0646 0.0782 0.543 B_Naive2 L2
ENSG00000180263 FGD6 -359170 sc-eQTL 4.50e-01 0.0497 0.0656 0.543 B_Naive2 L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 8.75e-01 -0.0101 0.0646 0.543 B_Naive2 L2
ENSG00000028203 VEZT -359434 sc-eQTL 9.15e-01 0.009 0.0838 0.545 CD4_CTL L2
ENSG00000111142 METAP2 -615208 sc-eQTL 6.43e-01 0.0406 0.0875 0.545 CD4_CTL L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 6.58e-01 -0.0389 0.0879 0.545 CD4_CTL L2
ENSG00000136014 USP44 -693164 sc-eQTL 9.75e-01 0.0022 0.0697 0.545 CD4_CTL L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 3.09e-01 -0.0797 0.0781 0.545 CD4_CTL L2
ENSG00000173588 CEP83 398324 sc-eQTL 4.61e-01 -0.059 0.08 0.545 CD4_CTL L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 4.62e-03 -0.202 0.0707 0.545 CD4_CTL L2
ENSG00000028203 VEZT -359434 sc-eQTL 9.38e-01 0.00494 0.0632 0.545 CD4_Naive L2
ENSG00000111142 METAP2 -615208 sc-eQTL 7.12e-01 -0.0202 0.0547 0.545 CD4_Naive L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 8.47e-01 -0.0129 0.0668 0.545 CD4_Naive L2
ENSG00000136014 USP44 -693164 sc-eQTL 3.56e-01 -0.0711 0.0767 0.545 CD4_Naive L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 2.45e-01 0.0609 0.0522 0.545 CD4_Naive L2
ENSG00000173588 CEP83 398324 sc-eQTL 5.91e-01 -0.0305 0.0566 0.545 CD4_Naive L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 6.07e-03 -0.132 0.0478 0.545 CD4_Naive L2
ENSG00000028203 VEZT -359434 sc-eQTL 4.87e-01 -0.047 0.0675 0.545 CD4_TCM L2
ENSG00000111142 METAP2 -615208 sc-eQTL 2.48e-01 -0.0731 0.0631 0.545 CD4_TCM L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 9.64e-01 0.00335 0.0737 0.545 CD4_TCM L2
ENSG00000136014 USP44 -693164 sc-eQTL 3.09e-01 -0.0873 0.0856 0.545 CD4_TCM L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 7.19e-01 -0.0227 0.0631 0.545 CD4_TCM L2
ENSG00000173588 CEP83 398324 sc-eQTL 1.39e-01 -0.0993 0.0669 0.545 CD4_TCM L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 2.86e-03 -0.171 0.0567 0.545 CD4_TCM L2
ENSG00000028203 VEZT -359434 sc-eQTL 4.80e-01 -0.0619 0.0876 0.545 CD4_TEM L2
ENSG00000111142 METAP2 -615208 sc-eQTL 2.20e-01 -0.0952 0.0774 0.545 CD4_TEM L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 9.35e-01 -0.00666 0.0816 0.545 CD4_TEM L2
ENSG00000136014 USP44 -693164 sc-eQTL 1.70e-01 -0.113 0.0817 0.545 CD4_TEM L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 2.11e-02 -0.161 0.0692 0.545 CD4_TEM L2
ENSG00000173588 CEP83 398324 sc-eQTL 8.76e-01 -0.0123 0.0787 0.545 CD4_TEM L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 1.88e-02 -0.166 0.0702 0.545 CD4_TEM L2
ENSG00000028203 VEZT -359434 sc-eQTL 9.42e-01 0.00555 0.0763 0.545 CD8_CTL L2
ENSG00000057704 TMCC3 207755 sc-eQTL 7.82e-01 -0.0186 0.0672 0.545 CD8_CTL L2
ENSG00000111142 METAP2 -615208 sc-eQTL 5.52e-01 0.0454 0.0762 0.545 CD8_CTL L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 6.40e-01 0.0396 0.0843 0.545 CD8_CTL L2
ENSG00000136014 USP44 -693164 sc-eQTL 6.37e-01 -0.0382 0.0808 0.545 CD8_CTL L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 3.31e-01 -0.067 0.0688 0.545 CD8_CTL L2
ENSG00000173588 CEP83 398324 sc-eQTL 4.18e-01 -0.0615 0.0759 0.545 CD8_CTL L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 1.52e-01 -0.0856 0.0595 0.545 CD8_CTL L2
ENSG00000028203 VEZT -359434 sc-eQTL 6.70e-01 0.0332 0.0779 0.545 CD8_Naive L2
ENSG00000057704 TMCC3 207755 sc-eQTL 3.94e-01 -0.0519 0.0608 0.545 CD8_Naive L2
ENSG00000111142 METAP2 -615208 sc-eQTL 6.66e-01 -0.0305 0.0705 0.545 CD8_Naive L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 9.76e-01 -0.00237 0.0782 0.545 CD8_Naive L2
ENSG00000136014 USP44 -693164 sc-eQTL 4.30e-01 -0.0558 0.0705 0.545 CD8_Naive L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 7.34e-01 0.0243 0.0715 0.545 CD8_Naive L2
ENSG00000173588 CEP83 398324 sc-eQTL 6.60e-01 0.0304 0.0689 0.545 CD8_Naive L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 8.02e-01 -0.0143 0.0571 0.545 CD8_Naive L2
ENSG00000028203 VEZT -359434 sc-eQTL 4.04e-01 -0.0712 0.0852 0.535 CD8_TCM L2
ENSG00000057704 TMCC3 207755 sc-eQTL 1.76e-01 -0.0888 0.0655 0.535 CD8_TCM L2
ENSG00000111142 METAP2 -615208 sc-eQTL 3.66e-01 -0.0782 0.0863 0.535 CD8_TCM L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 5.06e-01 0.0579 0.087 0.535 CD8_TCM L2
ENSG00000136014 USP44 -693164 sc-eQTL 5.37e-01 -0.0483 0.078 0.535 CD8_TCM L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 1.91e-01 -0.108 0.082 0.535 CD8_TCM L2
ENSG00000173588 CEP83 398324 sc-eQTL 6.10e-01 0.0432 0.0845 0.535 CD8_TCM L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 3.11e-01 -0.0689 0.0678 0.535 CD8_TCM L2
ENSG00000028203 VEZT -359434 sc-eQTL 7.20e-01 -0.0315 0.0878 0.548 CD8_TEM L2
ENSG00000057704 TMCC3 207755 sc-eQTL 3.48e-01 -0.0708 0.0753 0.548 CD8_TEM L2
ENSG00000111142 METAP2 -615208 sc-eQTL 4.38e-01 -0.0661 0.0851 0.548 CD8_TEM L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 3.09e-01 -0.0911 0.0894 0.548 CD8_TEM L2
ENSG00000136014 USP44 -693164 sc-eQTL 6.94e-01 0.0293 0.0744 0.548 CD8_TEM L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 5.17e-01 0.055 0.0846 0.548 CD8_TEM L2
ENSG00000173588 CEP83 398324 sc-eQTL 6.07e-01 -0.045 0.0874 0.548 CD8_TEM L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 6.64e-01 0.0325 0.0746 0.548 CD8_TEM L2
ENSG00000028203 VEZT -359434 sc-eQTL 9.06e-01 0.01 0.0847 0.543 MAIT L2
ENSG00000057704 TMCC3 207755 sc-eQTL 9.07e-01 0.0084 0.0717 0.543 MAIT L2
ENSG00000074527 NTN4 -932840 sc-eQTL 8.72e-01 0.0105 0.0654 0.543 MAIT L2
ENSG00000111142 METAP2 -615208 sc-eQTL 6.98e-01 0.0319 0.0823 0.543 MAIT L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 8.07e-01 0.0196 0.0798 0.543 MAIT L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 1.34e-01 0.105 0.0699 0.543 MAIT L2
ENSG00000173588 CEP83 398324 sc-eQTL 6.18e-01 0.0401 0.0804 0.543 MAIT L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 3.87e-01 -0.0608 0.0702 0.543 MAIT L2
ENSG00000028203 VEZT -359434 sc-eQTL 6.70e-01 0.0375 0.0879 0.542 NK_CD56bright L2
ENSG00000057704 TMCC3 207755 sc-eQTL 7.47e-01 0.0272 0.0842 0.542 NK_CD56bright L2
ENSG00000111142 METAP2 -615208 sc-eQTL 5.56e-01 0.051 0.0864 0.542 NK_CD56bright L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 3.19e-01 0.0906 0.0906 0.542 NK_CD56bright L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 2.58e-02 -0.165 0.0735 0.542 NK_CD56bright L2
ENSG00000173588 CEP83 398324 sc-eQTL 9.69e-01 0.00289 0.0754 0.542 NK_CD56bright L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 2.52e-01 -0.0827 0.072 0.542 NK_CD56bright L2
ENSG00000028203 VEZT -359434 sc-eQTL 3.10e-01 0.0842 0.0827 0.543 NK_CD56dim L2
ENSG00000057704 TMCC3 207755 sc-eQTL 7.49e-01 -0.0231 0.0722 0.543 NK_CD56dim L2
ENSG00000111142 METAP2 -615208 sc-eQTL 9.55e-01 0.00421 0.0748 0.543 NK_CD56dim L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 2.17e-01 0.0941 0.076 0.543 NK_CD56dim L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 6.00e-01 0.0352 0.0669 0.543 NK_CD56dim L2
ENSG00000173588 CEP83 398324 sc-eQTL 2.09e-02 -0.178 0.0764 0.543 NK_CD56dim L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 6.27e-04 -0.182 0.0525 0.543 NK_CD56dim L2
ENSG00000028203 VEZT -359434 sc-eQTL 4.93e-01 0.065 0.0946 0.557 NK_HLA L2
ENSG00000057704 TMCC3 207755 sc-eQTL 4.81e-02 0.165 0.0831 0.557 NK_HLA L2
ENSG00000111142 METAP2 -615208 sc-eQTL 3.00e-01 0.0915 0.088 0.557 NK_HLA L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 6.39e-01 0.0437 0.093 0.557 NK_HLA L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 8.87e-01 0.0108 0.0761 0.557 NK_HLA L2
ENSG00000173588 CEP83 398324 sc-eQTL 1.94e-02 0.203 0.0861 0.557 NK_HLA L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 1.65e-01 -0.109 0.0782 0.557 NK_HLA L2
ENSG00000028203 VEZT -359434 sc-eQTL 9.10e-01 -0.00868 0.0767 0.543 NK_cytokine L2
ENSG00000057704 TMCC3 207755 sc-eQTL 7.10e-02 0.142 0.0781 0.543 NK_cytokine L2
ENSG00000111142 METAP2 -615208 sc-eQTL 7.22e-02 -0.14 0.0773 0.543 NK_cytokine L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 3.28e-01 -0.0788 0.0804 0.543 NK_cytokine L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 9.92e-01 0.000686 0.0697 0.543 NK_cytokine L2
ENSG00000173588 CEP83 398324 sc-eQTL 8.91e-01 -0.011 0.0801 0.543 NK_cytokine L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 5.49e-01 -0.0335 0.0558 0.543 NK_cytokine L2
ENSG00000028203 VEZT -359434 sc-eQTL 1.66e-01 -0.144 0.104 0.556 PB L2
ENSG00000057704 TMCC3 207755 sc-eQTL 5.38e-01 0.058 0.0939 0.556 PB L2
ENSG00000111142 METAP2 -615208 sc-eQTL 3.58e-01 0.0958 0.104 0.556 PB L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 4.54e-01 0.0742 0.0989 0.556 PB L2
ENSG00000136014 USP44 -693164 sc-eQTL 5.31e-01 -0.0586 0.0932 0.556 PB L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 7.39e-01 0.0322 0.0963 0.556 PB L2
ENSG00000173588 CEP83 398324 sc-eQTL 9.87e-01 0.00166 0.1 0.556 PB L2
ENSG00000180263 FGD6 -359170 sc-eQTL 2.49e-01 -0.0961 0.0829 0.556 PB L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 4.02e-01 -0.0492 0.0584 0.556 PB L2
ENSG00000028203 VEZT -359434 sc-eQTL 2.03e-01 0.102 0.08 0.546 Pro_T L2
ENSG00000057704 TMCC3 207755 sc-eQTL 3.68e-01 -0.0644 0.0714 0.546 Pro_T L2
ENSG00000074527 NTN4 -932840 sc-eQTL 7.76e-01 -0.0166 0.0584 0.546 Pro_T L2
ENSG00000111142 METAP2 -615208 sc-eQTL 6.02e-01 0.036 0.0689 0.546 Pro_T L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 4.01e-01 -0.0698 0.083 0.546 Pro_T L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 8.05e-01 -0.0201 0.0814 0.546 Pro_T L2
ENSG00000173588 CEP83 398324 sc-eQTL 7.32e-01 0.0277 0.0806 0.546 Pro_T L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 9.80e-01 0.00126 0.0503 0.546 Pro_T L2
ENSG00000028203 VEZT -359434 sc-eQTL 5.25e-01 -0.0528 0.0829 0.545 Treg L2
ENSG00000111142 METAP2 -615208 sc-eQTL 1.67e-02 0.186 0.0772 0.545 Treg L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 5.99e-01 0.0436 0.0828 0.545 Treg L2
ENSG00000136014 USP44 -693164 sc-eQTL 3.44e-01 -0.0702 0.074 0.545 Treg L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 8.88e-02 0.13 0.0759 0.545 Treg L2
ENSG00000173588 CEP83 398324 sc-eQTL 4.79e-01 -0.0579 0.0817 0.545 Treg L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 2.14e-01 -0.0778 0.0625 0.545 Treg L2
ENSG00000028203 VEZT -359434 sc-eQTL 4.58e-02 0.164 0.0813 0.534 cDC L2
ENSG00000057704 TMCC3 207755 sc-eQTL 9.75e-01 0.00276 0.0886 0.534 cDC L2
ENSG00000111142 METAP2 -615208 sc-eQTL 5.21e-01 -0.0579 0.09 0.534 cDC L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 1.22e-01 -0.134 0.0862 0.534 cDC L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 6.16e-01 0.0389 0.0774 0.534 cDC L2
ENSG00000173588 CEP83 398324 sc-eQTL 3.74e-01 -0.0645 0.0724 0.534 cDC L2
ENSG00000180263 FGD6 -359170 sc-eQTL 4.31e-01 -0.0656 0.0833 0.534 cDC L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 1.63e-01 -0.0989 0.0706 0.534 cDC L2
ENSG00000028203 VEZT -359434 sc-eQTL 7.74e-01 -0.0233 0.081 0.545 cMono_IL1B L2
ENSG00000057704 TMCC3 207755 sc-eQTL 9.35e-01 -0.00522 0.0637 0.545 cMono_IL1B L2
ENSG00000111142 METAP2 -615208 sc-eQTL 7.92e-01 -0.0185 0.0699 0.545 cMono_IL1B L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 5.36e-01 -0.0456 0.0736 0.545 cMono_IL1B L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 3.41e-02 0.119 0.0556 0.545 cMono_IL1B L2
ENSG00000173588 CEP83 398324 sc-eQTL 8.71e-01 0.0124 0.0765 0.545 cMono_IL1B L2
ENSG00000180263 FGD6 -359170 sc-eQTL 3.89e-02 -0.134 0.0647 0.545 cMono_IL1B L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 2.20e-04 -0.169 0.0449 0.545 cMono_IL1B L2
ENSG00000028203 VEZT -359434 sc-eQTL 5.66e-01 -0.0477 0.0829 0.545 cMono_S100A L2
ENSG00000057704 TMCC3 207755 sc-eQTL 6.78e-01 0.0302 0.0726 0.545 cMono_S100A L2
ENSG00000111142 METAP2 -615208 sc-eQTL 8.35e-01 -0.0168 0.0802 0.545 cMono_S100A L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 1.10e-01 -0.126 0.0785 0.545 cMono_S100A L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 1.10e-02 0.15 0.0583 0.545 cMono_S100A L2
ENSG00000173588 CEP83 398324 sc-eQTL 2.06e-02 -0.193 0.0827 0.545 cMono_S100A L2
ENSG00000180263 FGD6 -359170 sc-eQTL 9.75e-01 -0.00242 0.0767 0.545 cMono_S100A L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 1.02e-04 -0.208 0.0526 0.545 cMono_S100A L2
ENSG00000028203 VEZT -359434 sc-eQTL 1.20e-01 -0.16 0.102 0.53 gdT L2
ENSG00000057704 TMCC3 207755 sc-eQTL 8.31e-01 0.0169 0.0788 0.53 gdT L2
ENSG00000074527 NTN4 -932840 sc-eQTL 1.17e-01 -0.122 0.0776 0.53 gdT L2
ENSG00000111142 METAP2 -615208 sc-eQTL 1.24e-02 0.243 0.0957 0.53 gdT L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 5.69e-01 0.0596 0.105 0.53 gdT L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 8.05e-01 0.0245 0.0993 0.53 gdT L2
ENSG00000173588 CEP83 398324 sc-eQTL 1.28e-01 -0.147 0.0963 0.53 gdT L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 6.36e-01 0.0401 0.0843 0.53 gdT L2
ENSG00000028203 VEZT -359434 sc-eQTL 3.45e-01 -0.0839 0.0887 0.542 intMono L2
ENSG00000057704 TMCC3 207755 sc-eQTL 8.62e-01 0.015 0.0862 0.542 intMono L2
ENSG00000111142 METAP2 -615208 sc-eQTL 4.61e-01 0.0668 0.0904 0.542 intMono L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 6.37e-01 0.0399 0.0845 0.542 intMono L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 2.90e-02 0.158 0.0719 0.542 intMono L2
ENSG00000173588 CEP83 398324 sc-eQTL 4.83e-01 0.0615 0.0875 0.542 intMono L2
ENSG00000180263 FGD6 -359170 sc-eQTL 2.65e-01 -0.0877 0.0784 0.542 intMono L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 5.76e-03 -0.154 0.0551 0.542 intMono L2
ENSG00000028203 VEZT -359434 sc-eQTL 4.45e-01 -0.0631 0.0824 0.538 ncMono L2
ENSG00000057704 TMCC3 207755 sc-eQTL 6.34e-01 0.038 0.0796 0.538 ncMono L2
ENSG00000111142 METAP2 -615208 sc-eQTL 3.57e-01 -0.0798 0.0865 0.538 ncMono L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 9.03e-01 -0.0105 0.0861 0.538 ncMono L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 8.04e-01 0.0137 0.0549 0.538 ncMono L2
ENSG00000173588 CEP83 398324 sc-eQTL 6.55e-01 -0.0383 0.0858 0.538 ncMono L2
ENSG00000180263 FGD6 -359170 sc-eQTL 8.10e-01 -0.0196 0.0815 0.538 ncMono L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 5.38e-02 -0.139 0.0718 0.538 ncMono L2
ENSG00000028203 VEZT -359434 sc-eQTL 7.10e-01 -0.0355 0.0952 0.508 pDC L2
ENSG00000057704 TMCC3 207755 sc-eQTL 8.39e-01 -0.0189 0.0928 0.508 pDC L2
ENSG00000111142 METAP2 -615208 sc-eQTL 9.32e-01 0.00832 0.0973 0.508 pDC L2
ENSG00000120798 NR2C1 -215316 sc-eQTL 3.71e-01 -0.0861 0.0959 0.508 pDC L2
ENSG00000136040 PLXNC1 709735 sc-eQTL 1.19e-01 0.144 0.0917 0.508 pDC L2
ENSG00000173588 CEP83 398324 sc-eQTL 1.46e-01 0.144 0.0987 0.508 pDC L2
ENSG00000180263 FGD6 -359170 sc-eQTL 7.28e-01 -0.0291 0.0836 0.508 pDC L2
ENSG00000184752 NDUFA12 -145436 sc-eQTL 3.17e-01 -0.0824 0.0822 0.508 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -359434 sc-eQTL 2.45e-02 -0.184 0.0811 0.545 B_Memory LOneK1K
ENSG00000057704 TMCC3 207755 sc-eQTL 8.46e-01 -0.0168 0.0866 0.545 B_Memory LOneK1K
ENSG00000111142 METAP2 -615208 sc-eQTL 8.46e-01 -0.0149 0.0764 0.545 B_Memory LOneK1K
ENSG00000120798 NR2C1 -215316 sc-eQTL 7.45e-02 0.156 0.0872 0.545 B_Memory LOneK1K
ENSG00000136014 USP44 -693164 sc-eQTL 8.26e-01 -0.0179 0.0813 0.545 B_Memory LOneK1K
ENSG00000136040 PLXNC1 709735 sc-eQTL 6.60e-01 -0.0231 0.0524 0.545 B_Memory LOneK1K
ENSG00000173588 CEP83 398324 sc-eQTL 6.74e-01 -0.0308 0.0732 0.545 B_Memory LOneK1K
ENSG00000180263 FGD6 -359170 sc-eQTL 3.20e-01 -0.0724 0.0726 0.545 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -145436 sc-eQTL 9.74e-01 0.00165 0.0503 0.545 B_Memory LOneK1K
ENSG00000028203 VEZT -359434 sc-eQTL 3.49e-01 -0.0708 0.0755 0.545 B_Naive LOneK1K
ENSG00000057704 TMCC3 207755 sc-eQTL 2.40e-01 -0.0901 0.0764 0.545 B_Naive LOneK1K
ENSG00000111142 METAP2 -615208 sc-eQTL 1.33e-01 -0.0947 0.0627 0.545 B_Naive LOneK1K
ENSG00000120798 NR2C1 -215316 sc-eQTL 7.37e-01 -0.0276 0.0821 0.545 B_Naive LOneK1K
ENSG00000136014 USP44 -693164 sc-eQTL 7.72e-01 -0.0212 0.0728 0.545 B_Naive LOneK1K
ENSG00000136040 PLXNC1 709735 sc-eQTL 6.67e-01 0.0268 0.0622 0.545 B_Naive LOneK1K
ENSG00000173588 CEP83 398324 sc-eQTL 2.45e-01 -0.0753 0.0647 0.545 B_Naive LOneK1K
ENSG00000180263 FGD6 -359170 sc-eQTL 8.52e-01 0.0149 0.08 0.545 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -145436 sc-eQTL 8.67e-01 0.00739 0.0442 0.545 B_Naive LOneK1K
ENSG00000028203 VEZT -359434 sc-eQTL 8.94e-01 -0.00988 0.0743 0.545 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 207755 sc-eQTL 9.85e-01 0.00109 0.0589 0.545 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -615208 sc-eQTL 8.46e-01 0.0123 0.0635 0.545 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -215316 sc-eQTL 1.53e-01 -0.0987 0.0688 0.545 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 709735 sc-eQTL 1.42e-02 0.127 0.0514 0.545 CD14_Mono LOneK1K
ENSG00000173588 CEP83 398324 sc-eQTL 3.34e-01 -0.0687 0.0709 0.545 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -359170 sc-eQTL 3.78e-02 -0.133 0.0635 0.545 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -145436 sc-eQTL 3.01e-05 -0.18 0.0423 0.545 CD14_Mono LOneK1K
ENSG00000028203 VEZT -359434 sc-eQTL 5.48e-01 -0.0506 0.0841 0.541 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 207755 sc-eQTL 8.50e-01 0.0148 0.0781 0.541 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -615208 sc-eQTL 9.52e-01 0.00464 0.0771 0.541 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -215316 sc-eQTL 9.89e-01 0.00114 0.0863 0.541 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 709735 sc-eQTL 1.47e-01 0.0721 0.0496 0.541 CD16_Mono LOneK1K
ENSG00000173588 CEP83 398324 sc-eQTL 4.28e-01 0.0656 0.0826 0.541 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -359170 sc-eQTL 1.18e-01 -0.11 0.0703 0.541 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -145436 sc-eQTL 2.43e-02 -0.126 0.0557 0.541 CD16_Mono LOneK1K
ENSG00000028203 VEZT -359434 sc-eQTL 3.71e-01 0.0681 0.0759 0.543 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 207755 sc-eQTL 2.77e-01 0.0771 0.0708 0.543 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -615208 sc-eQTL 9.12e-01 -0.00669 0.0607 0.543 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -215316 sc-eQTL 5.35e-01 0.0428 0.0688 0.543 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 709735 sc-eQTL 7.60e-01 0.0184 0.0604 0.543 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 398324 sc-eQTL 1.77e-01 -0.0916 0.0676 0.543 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -145436 sc-eQTL 4.21e-03 -0.142 0.0489 0.543 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000028203 VEZT -359434 eQTL 0.0126 -0.0336 0.0134 0.0 0.0 0.431
ENSG00000111142 METAP2 -615208 eQTL 0.00304 0.025 0.00842 0.00209 0.0 0.431
ENSG00000180263 FGD6 -359170 eQTL 0.00418 -0.0524 0.0183 0.0 0.0 0.431
ENSG00000184752 NDUFA12 -145436 eQTL 6.4e-09 -0.0975 0.0166 0.00166 0.0 0.431

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000173588 \N 398324 1.07e-06 7.46e-07 1.87e-07 4.35e-07 1.16e-07 3.39e-07 6.29e-07 2.47e-07 6.71e-07 3.12e-07 1.02e-06 5.22e-07 1.05e-06 1.59e-07 3.35e-07 3.68e-07 6.07e-07 4.16e-07 3.26e-07 2.73e-07 2.41e-07 5.34e-07 4.4e-07 3.01e-07 1.2e-06 2.53e-07 4.62e-07 3.95e-07 5.56e-07 8.4e-07 3.81e-07 4.47e-08 9.79e-08 2.06e-07 3.46e-07 2.04e-07 1.83e-07 1.24e-07 7.63e-08 8.66e-09 1.35e-07 7.36e-07 6.44e-08 5.71e-09 1.87e-07 4.38e-08 1.47e-07 8.16e-08 4.96e-08
ENSG00000180263 FGD6 -359170 1.25e-06 8.9e-07 3.03e-07 3.04e-07 2.14e-07 3.54e-07 7.44e-07 3.2e-07 8.92e-07 3.09e-07 1.11e-06 5.77e-07 1.37e-06 2.09e-07 4.3e-07 5.02e-07 7.68e-07 5.27e-07 3.66e-07 4.25e-07 2.93e-07 7.21e-07 5.81e-07 4.55e-07 1.53e-06 2.7e-07 5.76e-07 5e-07 7.61e-07 9.22e-07 4.61e-07 5.02e-08 1.75e-07 3.17e-07 3.21e-07 3.1e-07 2.96e-07 1.61e-07 1.44e-07 4.07e-08 1.98e-07 1.01e-06 7.53e-08 1.26e-08 1.61e-07 7.43e-08 1.8e-07 8.89e-08 9.42e-08
ENSG00000184752 NDUFA12 -145436 3.91e-06 3.71e-06 7.57e-07 1.86e-06 1.08e-06 8.3e-07 2.41e-06 9.27e-07 2.81e-06 1.66e-06 3.6e-06 2.56e-06 5.67e-06 1.25e-06 1.05e-06 2.23e-06 1.8e-06 2.26e-06 1.45e-06 8.79e-07 1.99e-06 3.65e-06 3.24e-06 1.87e-06 4.64e-06 1.24e-06 1.92e-06 1.44e-06 3.88e-06 3.32e-06 1.98e-06 5.43e-07 8.12e-07 1.74e-06 1.79e-06 9.23e-07 9.39e-07 4.91e-07 1.3e-06 3.63e-07 4.16e-07 4.1e-06 4.44e-07 1.86e-07 3.58e-07 3.56e-07 6.48e-07 3.18e-07 3.38e-07