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Genes within 1Mb (chr12:94846599:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -371147 sc-eQTL 8.34e-02 0.14 0.0805 0.306 B L1
ENSG00000057704 TMCC3 196042 sc-eQTL 3.44e-01 0.0901 0.0951 0.306 B L1
ENSG00000111142 METAP2 -626921 sc-eQTL 4.08e-01 0.059 0.0712 0.306 B L1
ENSG00000120798 NR2C1 -227029 sc-eQTL 1.20e-01 -0.14 0.0896 0.306 B L1
ENSG00000136014 USP44 -704877 sc-eQTL 8.97e-01 0.0106 0.0822 0.306 B L1
ENSG00000136040 PLXNC1 698022 sc-eQTL 9.84e-01 -0.00108 0.054 0.306 B L1
ENSG00000173588 CEP83 386611 sc-eQTL 6.33e-01 0.0326 0.0682 0.306 B L1
ENSG00000180263 FGD6 -370883 sc-eQTL 1.23e-01 0.127 0.082 0.306 B L1
ENSG00000184752 NDUFA12 -157149 sc-eQTL 6.92e-01 -0.0156 0.0393 0.306 B L1
ENSG00000028203 VEZT -371147 sc-eQTL 3.41e-01 -0.064 0.067 0.306 CD4T L1
ENSG00000111142 METAP2 -626921 sc-eQTL 7.90e-01 0.0156 0.0583 0.306 CD4T L1
ENSG00000120798 NR2C1 -227029 sc-eQTL 6.10e-02 0.121 0.0644 0.306 CD4T L1
ENSG00000136014 USP44 -704877 sc-eQTL 2.82e-01 0.0954 0.0885 0.306 CD4T L1
ENSG00000136040 PLXNC1 698022 sc-eQTL 8.36e-01 0.0118 0.0571 0.306 CD4T L1
ENSG00000173588 CEP83 386611 sc-eQTL 4.61e-02 0.119 0.0592 0.306 CD4T L1
ENSG00000184752 NDUFA12 -157149 sc-eQTL 8.13e-04 0.207 0.061 0.306 CD4T L1
ENSG00000028203 VEZT -371147 sc-eQTL 6.03e-01 0.0415 0.0796 0.306 CD8T L1
ENSG00000057704 TMCC3 196042 sc-eQTL 6.93e-01 0.0212 0.0535 0.306 CD8T L1
ENSG00000111142 METAP2 -626921 sc-eQTL 7.72e-01 -0.0198 0.0681 0.306 CD8T L1
ENSG00000120798 NR2C1 -227029 sc-eQTL 4.09e-01 -0.0717 0.0866 0.306 CD8T L1
ENSG00000136014 USP44 -704877 sc-eQTL 8.09e-01 -0.0188 0.0776 0.306 CD8T L1
ENSG00000136040 PLXNC1 698022 sc-eQTL 7.24e-02 0.132 0.0732 0.306 CD8T L1
ENSG00000173588 CEP83 386611 sc-eQTL 5.32e-01 -0.043 0.0688 0.306 CD8T L1
ENSG00000184752 NDUFA12 -157149 sc-eQTL 1.92e-01 0.0735 0.0562 0.306 CD8T L1
ENSG00000028203 VEZT -371147 sc-eQTL 4.55e-02 -0.191 0.0949 0.306 DC L1
ENSG00000057704 TMCC3 196042 sc-eQTL 1.71e-01 0.139 0.101 0.306 DC L1
ENSG00000111142 METAP2 -626921 sc-eQTL 2.69e-01 0.111 0.1 0.306 DC L1
ENSG00000120798 NR2C1 -227029 sc-eQTL 5.19e-01 0.0629 0.0974 0.306 DC L1
ENSG00000136040 PLXNC1 698022 sc-eQTL 9.11e-01 -0.0102 0.0909 0.306 DC L1
ENSG00000173588 CEP83 386611 sc-eQTL 8.88e-01 0.0114 0.081 0.306 DC L1
ENSG00000180263 FGD6 -370883 sc-eQTL 9.89e-01 -0.00125 0.0902 0.306 DC L1
ENSG00000184752 NDUFA12 -157149 sc-eQTL 3.52e-03 0.219 0.0743 0.306 DC L1
ENSG00000028203 VEZT -371147 sc-eQTL 3.12e-01 -0.0883 0.0871 0.306 Mono L1
ENSG00000057704 TMCC3 196042 sc-eQTL 3.77e-02 0.14 0.0672 0.306 Mono L1
ENSG00000111142 METAP2 -626921 sc-eQTL 8.57e-01 0.0125 0.0695 0.306 Mono L1
ENSG00000120798 NR2C1 -227029 sc-eQTL 9.38e-02 0.139 0.0823 0.306 Mono L1
ENSG00000136040 PLXNC1 698022 sc-eQTL 1.84e-01 -0.0747 0.0561 0.306 Mono L1
ENSG00000173588 CEP83 386611 sc-eQTL 1.79e-01 -0.112 0.0828 0.306 Mono L1
ENSG00000180263 FGD6 -370883 sc-eQTL 1.49e-01 0.107 0.0737 0.306 Mono L1
ENSG00000184752 NDUFA12 -157149 sc-eQTL 1.36e-05 0.227 0.0509 0.306 Mono L1
ENSG00000028203 VEZT -371147 sc-eQTL 7.57e-01 -0.0272 0.0878 0.307 NK L1
ENSG00000057704 TMCC3 196042 sc-eQTL 6.22e-01 0.0409 0.0828 0.307 NK L1
ENSG00000111142 METAP2 -626921 sc-eQTL 3.53e-01 0.0645 0.0693 0.307 NK L1
ENSG00000120798 NR2C1 -227029 sc-eQTL 5.79e-01 -0.0457 0.0822 0.307 NK L1
ENSG00000136040 PLXNC1 698022 sc-eQTL 6.89e-01 0.0272 0.0678 0.307 NK L1
ENSG00000173588 CEP83 386611 sc-eQTL 3.74e-01 0.0686 0.0769 0.307 NK L1
ENSG00000184752 NDUFA12 -157149 sc-eQTL 3.15e-03 0.166 0.0557 0.307 NK L1
ENSG00000028203 VEZT -371147 sc-eQTL 1.87e-01 -0.13 0.0983 0.306 Other_T L1
ENSG00000057704 TMCC3 196042 sc-eQTL 4.69e-01 0.0609 0.084 0.306 Other_T L1
ENSG00000074527 NTN4 -944553 sc-eQTL 1.25e-01 0.114 0.0739 0.306 Other_T L1
ENSG00000111142 METAP2 -626921 sc-eQTL 6.37e-01 0.0363 0.0767 0.306 Other_T L1
ENSG00000120798 NR2C1 -227029 sc-eQTL 5.86e-01 0.0523 0.0957 0.306 Other_T L1
ENSG00000136040 PLXNC1 698022 sc-eQTL 9.07e-01 0.00907 0.0778 0.306 Other_T L1
ENSG00000173588 CEP83 386611 sc-eQTL 5.04e-01 -0.0585 0.0874 0.306 Other_T L1
ENSG00000184752 NDUFA12 -157149 sc-eQTL 2.75e-02 0.107 0.0481 0.306 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -371147 sc-eQTL 9.48e-01 0.007 0.108 0.314 B_Activated L2
ENSG00000057704 TMCC3 196042 sc-eQTL 7.08e-01 -0.0345 0.0918 0.314 B_Activated L2
ENSG00000111142 METAP2 -626921 sc-eQTL 5.95e-01 -0.0597 0.112 0.314 B_Activated L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 3.31e-01 0.105 0.107 0.314 B_Activated L2
ENSG00000136014 USP44 -704877 sc-eQTL 9.49e-01 0.00531 0.0821 0.314 B_Activated L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 7.95e-01 -0.0225 0.0867 0.314 B_Activated L2
ENSG00000173588 CEP83 386611 sc-eQTL 1.67e-01 0.149 0.107 0.314 B_Activated L2
ENSG00000180263 FGD6 -370883 sc-eQTL 9.52e-02 0.127 0.0755 0.314 B_Activated L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 2.85e-01 -0.102 0.0948 0.314 B_Activated L2
ENSG00000028203 VEZT -371147 sc-eQTL 5.70e-01 0.0549 0.0966 0.307 B_Intermediate L2
ENSG00000057704 TMCC3 196042 sc-eQTL 1.98e-01 0.126 0.0974 0.307 B_Intermediate L2
ENSG00000111142 METAP2 -626921 sc-eQTL 7.69e-01 0.0263 0.0893 0.307 B_Intermediate L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 8.42e-02 -0.169 0.0972 0.307 B_Intermediate L2
ENSG00000136014 USP44 -704877 sc-eQTL 2.16e-01 0.124 0.0999 0.307 B_Intermediate L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 5.29e-01 -0.0519 0.0823 0.307 B_Intermediate L2
ENSG00000173588 CEP83 386611 sc-eQTL 4.90e-01 0.0631 0.0911 0.307 B_Intermediate L2
ENSG00000180263 FGD6 -370883 sc-eQTL 9.13e-01 0.00974 0.0896 0.307 B_Intermediate L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 6.00e-01 -0.0389 0.074 0.307 B_Intermediate L2
ENSG00000028203 VEZT -371147 sc-eQTL 6.51e-01 0.0465 0.103 0.306 B_Memory L2
ENSG00000057704 TMCC3 196042 sc-eQTL 9.24e-01 0.00991 0.104 0.306 B_Memory L2
ENSG00000111142 METAP2 -626921 sc-eQTL 7.45e-01 -0.0325 0.0996 0.306 B_Memory L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 1.72e-01 -0.146 0.107 0.306 B_Memory L2
ENSG00000136014 USP44 -704877 sc-eQTL 1.62e-01 0.133 0.095 0.306 B_Memory L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 7.49e-01 0.0259 0.0807 0.306 B_Memory L2
ENSG00000173588 CEP83 386611 sc-eQTL 9.30e-01 -0.00822 0.0941 0.306 B_Memory L2
ENSG00000180263 FGD6 -370883 sc-eQTL 4.77e-02 0.187 0.094 0.306 B_Memory L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 7.97e-01 -0.0196 0.0764 0.306 B_Memory L2
ENSG00000028203 VEZT -371147 sc-eQTL 3.43e-01 0.0917 0.0964 0.306 B_Naive1 L2
ENSG00000057704 TMCC3 196042 sc-eQTL 6.60e-01 -0.0431 0.0977 0.306 B_Naive1 L2
ENSG00000111142 METAP2 -626921 sc-eQTL 3.66e-02 0.171 0.0813 0.306 B_Naive1 L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 5.48e-01 0.0603 0.1 0.306 B_Naive1 L2
ENSG00000136014 USP44 -704877 sc-eQTL 4.05e-01 -0.0824 0.0987 0.306 B_Naive1 L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 7.59e-01 0.0255 0.083 0.306 B_Naive1 L2
ENSG00000173588 CEP83 386611 sc-eQTL 9.57e-01 0.00463 0.0858 0.306 B_Naive1 L2
ENSG00000180263 FGD6 -370883 sc-eQTL 7.48e-01 0.0302 0.0939 0.306 B_Naive1 L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 3.90e-01 -0.0471 0.0546 0.306 B_Naive1 L2
ENSG00000028203 VEZT -371147 sc-eQTL 1.01e-01 -0.171 0.104 0.307 B_Naive2 L2
ENSG00000057704 TMCC3 196042 sc-eQTL 2.23e-03 0.289 0.0933 0.307 B_Naive2 L2
ENSG00000111142 METAP2 -626921 sc-eQTL 9.52e-01 0.00576 0.0964 0.307 B_Naive2 L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 3.68e-01 -0.095 0.105 0.307 B_Naive2 L2
ENSG00000136014 USP44 -704877 sc-eQTL 8.91e-01 0.0132 0.0964 0.307 B_Naive2 L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 5.81e-01 -0.0493 0.0892 0.307 B_Naive2 L2
ENSG00000173588 CEP83 386611 sc-eQTL 7.53e-01 0.0297 0.0942 0.307 B_Naive2 L2
ENSG00000180263 FGD6 -370883 sc-eQTL 4.39e-01 0.0611 0.0789 0.307 B_Naive2 L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 9.03e-01 -0.00942 0.0776 0.307 B_Naive2 L2
ENSG00000028203 VEZT -371147 sc-eQTL 9.44e-01 -0.00704 0.1 0.309 CD4_CTL L2
ENSG00000111142 METAP2 -626921 sc-eQTL 9.25e-01 0.00988 0.105 0.309 CD4_CTL L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 3.99e-02 0.215 0.104 0.309 CD4_CTL L2
ENSG00000136014 USP44 -704877 sc-eQTL 4.77e-01 0.0594 0.0833 0.309 CD4_CTL L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 4.48e-01 0.071 0.0935 0.309 CD4_CTL L2
ENSG00000173588 CEP83 386611 sc-eQTL 5.96e-01 0.0509 0.0957 0.309 CD4_CTL L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 7.70e-02 0.152 0.0856 0.309 CD4_CTL L2
ENSG00000028203 VEZT -371147 sc-eQTL 4.74e-01 -0.0546 0.0761 0.306 CD4_Naive L2
ENSG00000111142 METAP2 -626921 sc-eQTL 6.87e-01 0.0266 0.066 0.306 CD4_Naive L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 1.00e-01 0.132 0.0801 0.306 CD4_Naive L2
ENSG00000136014 USP44 -704877 sc-eQTL 5.56e-01 0.0547 0.0927 0.306 CD4_Naive L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 9.14e-01 0.00683 0.0632 0.306 CD4_Naive L2
ENSG00000173588 CEP83 386611 sc-eQTL 6.02e-01 0.0357 0.0683 0.306 CD4_Naive L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 2.75e-03 0.174 0.0575 0.306 CD4_Naive L2
ENSG00000028203 VEZT -371147 sc-eQTL 4.85e-01 -0.0561 0.0803 0.306 CD4_TCM L2
ENSG00000111142 METAP2 -626921 sc-eQTL 6.59e-01 -0.0332 0.0753 0.306 CD4_TCM L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 3.82e-01 0.0766 0.0875 0.306 CD4_TCM L2
ENSG00000136014 USP44 -704877 sc-eQTL 4.53e-01 0.0767 0.102 0.306 CD4_TCM L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 6.67e-01 0.0323 0.075 0.306 CD4_TCM L2
ENSG00000173588 CEP83 386611 sc-eQTL 1.88e-01 0.105 0.0796 0.306 CD4_TCM L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 1.83e-03 0.213 0.0673 0.306 CD4_TCM L2
ENSG00000028203 VEZT -371147 sc-eQTL 2.65e-01 0.116 0.103 0.306 CD4_TEM L2
ENSG00000111142 METAP2 -626921 sc-eQTL 3.60e-01 0.0842 0.0917 0.306 CD4_TEM L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 9.48e-01 0.0063 0.0966 0.306 CD4_TEM L2
ENSG00000136014 USP44 -704877 sc-eQTL 3.40e-01 0.0927 0.0969 0.306 CD4_TEM L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 1.58e-01 0.117 0.0825 0.306 CD4_TEM L2
ENSG00000173588 CEP83 386611 sc-eQTL 1.75e-01 0.126 0.0927 0.306 CD4_TEM L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 3.02e-02 0.182 0.0832 0.306 CD4_TEM L2
ENSG00000028203 VEZT -371147 sc-eQTL 7.98e-01 0.0235 0.0915 0.306 CD8_CTL L2
ENSG00000057704 TMCC3 196042 sc-eQTL 4.94e-01 0.0553 0.0806 0.306 CD8_CTL L2
ENSG00000111142 METAP2 -626921 sc-eQTL 7.32e-02 -0.164 0.0909 0.306 CD8_CTL L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 8.36e-01 -0.0209 0.101 0.306 CD8_CTL L2
ENSG00000136014 USP44 -704877 sc-eQTL 9.55e-01 -0.00551 0.0971 0.306 CD8_CTL L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 2.43e-02 0.186 0.0818 0.306 CD8_CTL L2
ENSG00000173588 CEP83 386611 sc-eQTL 2.59e-01 0.103 0.0909 0.306 CD8_CTL L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 3.08e-01 0.0731 0.0716 0.306 CD8_CTL L2
ENSG00000028203 VEZT -371147 sc-eQTL 1.78e-01 -0.125 0.0927 0.306 CD8_Naive L2
ENSG00000057704 TMCC3 196042 sc-eQTL 1.34e-01 0.109 0.0723 0.306 CD8_Naive L2
ENSG00000111142 METAP2 -626921 sc-eQTL 4.01e-01 0.0708 0.0841 0.306 CD8_Naive L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 4.88e-01 -0.0648 0.0933 0.306 CD8_Naive L2
ENSG00000136014 USP44 -704877 sc-eQTL 8.35e-01 0.0176 0.0844 0.306 CD8_Naive L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 6.11e-01 0.0434 0.0853 0.306 CD8_Naive L2
ENSG00000173588 CEP83 386611 sc-eQTL 3.18e-01 -0.0822 0.0821 0.306 CD8_Naive L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 5.36e-01 0.0423 0.0681 0.306 CD8_Naive L2
ENSG00000028203 VEZT -371147 sc-eQTL 1.17e-01 0.159 0.101 0.31 CD8_TCM L2
ENSG00000057704 TMCC3 196042 sc-eQTL 4.58e-01 0.0582 0.0784 0.31 CD8_TCM L2
ENSG00000111142 METAP2 -626921 sc-eQTL 3.00e-01 0.107 0.103 0.31 CD8_TCM L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 3.25e-01 -0.102 0.104 0.31 CD8_TCM L2
ENSG00000136014 USP44 -704877 sc-eQTL 4.41e-01 0.072 0.0931 0.31 CD8_TCM L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 8.92e-01 -0.0133 0.0983 0.31 CD8_TCM L2
ENSG00000173588 CEP83 386611 sc-eQTL 1.63e-01 0.141 0.1 0.31 CD8_TCM L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 5.66e-01 0.0467 0.0811 0.31 CD8_TCM L2
ENSG00000028203 VEZT -371147 sc-eQTL 5.98e-01 0.0548 0.104 0.299 CD8_TEM L2
ENSG00000057704 TMCC3 196042 sc-eQTL 2.52e-01 0.102 0.0888 0.299 CD8_TEM L2
ENSG00000111142 METAP2 -626921 sc-eQTL 2.91e-01 0.106 0.1 0.299 CD8_TEM L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 8.76e-01 0.0165 0.106 0.299 CD8_TEM L2
ENSG00000136014 USP44 -704877 sc-eQTL 7.07e-01 0.033 0.0878 0.299 CD8_TEM L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 7.10e-01 -0.0372 0.1 0.299 CD8_TEM L2
ENSG00000173588 CEP83 386611 sc-eQTL 8.99e-01 -0.0132 0.103 0.299 CD8_TEM L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 5.92e-01 0.0473 0.0881 0.299 CD8_TEM L2
ENSG00000028203 VEZT -371147 sc-eQTL 3.26e-01 -0.101 0.103 0.307 MAIT L2
ENSG00000057704 TMCC3 196042 sc-eQTL 3.41e-01 0.083 0.0871 0.307 MAIT L2
ENSG00000074527 NTN4 -944553 sc-eQTL 3.74e-01 0.0709 0.0795 0.307 MAIT L2
ENSG00000111142 METAP2 -626921 sc-eQTL 2.46e-01 0.116 0.0999 0.307 MAIT L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 8.74e-01 0.0154 0.0972 0.307 MAIT L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 2.95e-01 -0.0895 0.0853 0.307 MAIT L2
ENSG00000173588 CEP83 386611 sc-eQTL 1.67e-01 -0.135 0.0975 0.307 MAIT L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 7.35e-02 0.153 0.085 0.307 MAIT L2
ENSG00000028203 VEZT -371147 sc-eQTL 5.32e-01 -0.0654 0.104 0.302 NK_CD56bright L2
ENSG00000057704 TMCC3 196042 sc-eQTL 7.54e-01 -0.0314 0.1 0.302 NK_CD56bright L2
ENSG00000111142 METAP2 -626921 sc-eQTL 6.18e-01 0.0513 0.103 0.302 NK_CD56bright L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 6.41e-01 -0.0504 0.108 0.302 NK_CD56bright L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 6.14e-01 0.0447 0.0885 0.302 NK_CD56bright L2
ENSG00000173588 CEP83 386611 sc-eQTL 9.70e-01 -0.00342 0.0897 0.302 NK_CD56bright L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 6.95e-01 0.0337 0.0859 0.302 NK_CD56bright L2
ENSG00000028203 VEZT -371147 sc-eQTL 8.09e-01 -0.0239 0.0986 0.306 NK_CD56dim L2
ENSG00000057704 TMCC3 196042 sc-eQTL 1.55e-01 0.122 0.0854 0.306 NK_CD56dim L2
ENSG00000111142 METAP2 -626921 sc-eQTL 2.20e-01 0.109 0.0887 0.306 NK_CD56dim L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 8.55e-01 0.0166 0.0907 0.306 NK_CD56dim L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 6.12e-01 0.0404 0.0796 0.306 NK_CD56dim L2
ENSG00000173588 CEP83 386611 sc-eQTL 5.28e-02 0.178 0.0912 0.306 NK_CD56dim L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 3.82e-04 0.225 0.0623 0.306 NK_CD56dim L2
ENSG00000028203 VEZT -371147 sc-eQTL 7.30e-01 -0.0371 0.108 0.301 NK_HLA L2
ENSG00000057704 TMCC3 196042 sc-eQTL 2.27e-01 0.115 0.0951 0.301 NK_HLA L2
ENSG00000111142 METAP2 -626921 sc-eQTL 6.31e-01 -0.0482 0.1 0.301 NK_HLA L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 8.33e-01 0.0223 0.106 0.301 NK_HLA L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 5.79e-01 0.048 0.0864 0.301 NK_HLA L2
ENSG00000173588 CEP83 386611 sc-eQTL 3.64e-02 -0.207 0.0981 0.301 NK_HLA L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 4.42e-01 0.0687 0.0892 0.301 NK_HLA L2
ENSG00000028203 VEZT -371147 sc-eQTL 9.45e-01 0.00635 0.0913 0.306 NK_cytokine L2
ENSG00000057704 TMCC3 196042 sc-eQTL 1.73e-01 -0.128 0.0932 0.306 NK_cytokine L2
ENSG00000111142 METAP2 -626921 sc-eQTL 7.45e-01 0.0302 0.0927 0.306 NK_cytokine L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 9.63e-01 -0.00451 0.0959 0.306 NK_cytokine L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 6.56e-01 -0.037 0.083 0.306 NK_cytokine L2
ENSG00000173588 CEP83 386611 sc-eQTL 8.23e-01 -0.0213 0.0953 0.306 NK_cytokine L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 2.80e-01 0.0719 0.0663 0.306 NK_cytokine L2
ENSG00000028203 VEZT -371147 sc-eQTL 2.64e-01 0.145 0.13 0.296 PB L2
ENSG00000057704 TMCC3 196042 sc-eQTL 5.53e-01 -0.0697 0.117 0.296 PB L2
ENSG00000111142 METAP2 -626921 sc-eQTL 1.41e-01 -0.191 0.129 0.296 PB L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 4.69e-01 -0.0897 0.123 0.296 PB L2
ENSG00000136014 USP44 -704877 sc-eQTL 3.22e-01 -0.115 0.116 0.296 PB L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 8.54e-01 -0.0222 0.12 0.296 PB L2
ENSG00000173588 CEP83 386611 sc-eQTL 7.57e-01 0.0387 0.125 0.296 PB L2
ENSG00000180263 FGD6 -370883 sc-eQTL 2.12e-01 0.13 0.103 0.296 PB L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 9.90e-01 0.000901 0.0731 0.296 PB L2
ENSG00000028203 VEZT -371147 sc-eQTL 2.90e-02 -0.207 0.0942 0.307 Pro_T L2
ENSG00000057704 TMCC3 196042 sc-eQTL 4.97e-01 0.0577 0.0848 0.307 Pro_T L2
ENSG00000074527 NTN4 -944553 sc-eQTL 7.42e-01 0.0228 0.0693 0.307 Pro_T L2
ENSG00000111142 METAP2 -626921 sc-eQTL 6.90e-01 0.0326 0.0818 0.307 Pro_T L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 4.62e-02 0.196 0.0977 0.307 Pro_T L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 2.68e-01 0.107 0.0963 0.307 Pro_T L2
ENSG00000173588 CEP83 386611 sc-eQTL 4.38e-01 -0.0742 0.0955 0.307 Pro_T L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 3.47e-01 -0.0561 0.0596 0.307 Pro_T L2
ENSG00000028203 VEZT -371147 sc-eQTL 5.94e-01 -0.0524 0.0981 0.306 Treg L2
ENSG00000111142 METAP2 -626921 sc-eQTL 5.64e-01 -0.0535 0.0926 0.306 Treg L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 2.56e-01 0.111 0.0978 0.306 Treg L2
ENSG00000136014 USP44 -704877 sc-eQTL 8.42e-01 0.0175 0.0878 0.306 Treg L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 3.22e-01 -0.0895 0.0902 0.306 Treg L2
ENSG00000173588 CEP83 386611 sc-eQTL 2.28e-01 0.117 0.0965 0.306 Treg L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 6.97e-02 0.134 0.0736 0.306 Treg L2
ENSG00000028203 VEZT -371147 sc-eQTL 1.40e-02 -0.241 0.0972 0.31 cDC L2
ENSG00000057704 TMCC3 196042 sc-eQTL 8.66e-01 0.0179 0.107 0.31 cDC L2
ENSG00000111142 METAP2 -626921 sc-eQTL 2.22e-01 0.132 0.108 0.31 cDC L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 7.16e-01 0.038 0.104 0.31 cDC L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 9.12e-01 0.0103 0.093 0.31 cDC L2
ENSG00000173588 CEP83 386611 sc-eQTL 4.24e-01 0.0698 0.0871 0.31 cDC L2
ENSG00000180263 FGD6 -370883 sc-eQTL 7.10e-01 -0.0373 0.1 0.31 cDC L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 6.43e-03 0.23 0.0835 0.31 cDC L2
ENSG00000028203 VEZT -371147 sc-eQTL 6.17e-01 -0.0484 0.0966 0.306 cMono_IL1B L2
ENSG00000057704 TMCC3 196042 sc-eQTL 1.32e-02 0.187 0.0749 0.306 cMono_IL1B L2
ENSG00000111142 METAP2 -626921 sc-eQTL 2.63e-01 0.0933 0.0832 0.306 cMono_IL1B L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 8.76e-02 0.15 0.0873 0.306 cMono_IL1B L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 3.51e-01 -0.0625 0.0669 0.306 cMono_IL1B L2
ENSG00000173588 CEP83 386611 sc-eQTL 6.25e-02 -0.17 0.0905 0.306 cMono_IL1B L2
ENSG00000180263 FGD6 -370883 sc-eQTL 1.07e-01 0.125 0.0774 0.306 cMono_IL1B L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 2.61e-04 0.199 0.0536 0.306 cMono_IL1B L2
ENSG00000028203 VEZT -371147 sc-eQTL 9.49e-01 -0.00624 0.0984 0.306 cMono_S100A L2
ENSG00000057704 TMCC3 196042 sc-eQTL 2.73e-01 0.0943 0.0859 0.306 cMono_S100A L2
ENSG00000111142 METAP2 -626921 sc-eQTL 9.95e-01 0.000636 0.0951 0.306 cMono_S100A L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 4.09e-01 0.0774 0.0935 0.306 cMono_S100A L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 2.99e-02 -0.152 0.0694 0.306 cMono_S100A L2
ENSG00000173588 CEP83 386611 sc-eQTL 2.52e-01 0.114 0.099 0.306 cMono_S100A L2
ENSG00000180263 FGD6 -370883 sc-eQTL 9.46e-01 -0.00613 0.0909 0.306 cMono_S100A L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 2.47e-04 0.234 0.0626 0.306 cMono_S100A L2
ENSG00000028203 VEZT -371147 sc-eQTL 6.58e-01 0.0546 0.123 0.303 gdT L2
ENSG00000057704 TMCC3 196042 sc-eQTL 7.46e-01 0.0307 0.0944 0.303 gdT L2
ENSG00000074527 NTN4 -944553 sc-eQTL 6.45e-03 0.252 0.0913 0.303 gdT L2
ENSG00000111142 METAP2 -626921 sc-eQTL 8.37e-02 -0.202 0.116 0.303 gdT L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 2.50e-01 0.144 0.125 0.303 gdT L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 3.65e-01 0.108 0.119 0.303 gdT L2
ENSG00000173588 CEP83 386611 sc-eQTL 5.12e-01 0.0763 0.116 0.303 gdT L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 8.97e-01 -0.0131 0.101 0.303 gdT L2
ENSG00000028203 VEZT -371147 sc-eQTL 8.31e-01 0.0224 0.105 0.311 intMono L2
ENSG00000057704 TMCC3 196042 sc-eQTL 9.67e-01 -0.00423 0.102 0.311 intMono L2
ENSG00000111142 METAP2 -626921 sc-eQTL 3.05e-01 -0.109 0.107 0.311 intMono L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 6.22e-01 -0.0492 0.0996 0.311 intMono L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 3.67e-01 -0.0775 0.0856 0.311 intMono L2
ENSG00000173588 CEP83 386611 sc-eQTL 1.70e-01 -0.142 0.103 0.311 intMono L2
ENSG00000180263 FGD6 -370883 sc-eQTL 1.00e-01 0.152 0.0922 0.311 intMono L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 3.95e-03 0.189 0.0649 0.311 intMono L2
ENSG00000028203 VEZT -371147 sc-eQTL 5.31e-01 0.0617 0.0984 0.31 ncMono L2
ENSG00000057704 TMCC3 196042 sc-eQTL 7.16e-01 0.0346 0.095 0.31 ncMono L2
ENSG00000111142 METAP2 -626921 sc-eQTL 6.93e-01 0.0409 0.103 0.31 ncMono L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 3.48e-01 0.0964 0.102 0.31 ncMono L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 1.30e-01 0.099 0.0651 0.31 ncMono L2
ENSG00000173588 CEP83 386611 sc-eQTL 6.52e-01 0.0463 0.102 0.31 ncMono L2
ENSG00000180263 FGD6 -370883 sc-eQTL 4.72e-01 0.07 0.0971 0.31 ncMono L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 1.96e-01 0.112 0.0861 0.31 ncMono L2
ENSG00000028203 VEZT -371147 sc-eQTL 3.24e-01 0.107 0.108 0.328 pDC L2
ENSG00000057704 TMCC3 196042 sc-eQTL 1.73e-01 0.144 0.105 0.328 pDC L2
ENSG00000111142 METAP2 -626921 sc-eQTL 2.44e-01 0.129 0.111 0.328 pDC L2
ENSG00000120798 NR2C1 -227029 sc-eQTL 4.78e-02 0.216 0.108 0.328 pDC L2
ENSG00000136040 PLXNC1 698022 sc-eQTL 6.80e-01 0.0436 0.106 0.328 pDC L2
ENSG00000173588 CEP83 386611 sc-eQTL 1.25e-01 -0.174 0.113 0.328 pDC L2
ENSG00000180263 FGD6 -370883 sc-eQTL 2.27e-01 0.115 0.095 0.328 pDC L2
ENSG00000184752 NDUFA12 -157149 sc-eQTL 3.12e-01 0.0952 0.0938 0.328 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000028203 VEZT -371147 sc-eQTL 4.11e-01 0.0796 0.0968 0.306 B_Memory LOneK1K
ENSG00000057704 TMCC3 196042 sc-eQTL 3.61e-01 0.0934 0.102 0.306 B_Memory LOneK1K
ENSG00000111142 METAP2 -626921 sc-eQTL 8.37e-01 0.0186 0.0903 0.306 B_Memory LOneK1K
ENSG00000120798 NR2C1 -227029 sc-eQTL 5.73e-02 -0.197 0.103 0.306 B_Memory LOneK1K
ENSG00000136014 USP44 -704877 sc-eQTL 2.66e-01 0.107 0.0957 0.306 B_Memory LOneK1K
ENSG00000136040 PLXNC1 698022 sc-eQTL 6.15e-01 -0.0312 0.0619 0.306 B_Memory LOneK1K
ENSG00000173588 CEP83 386611 sc-eQTL 3.31e-01 0.084 0.0862 0.306 B_Memory LOneK1K
ENSG00000180263 FGD6 -370883 sc-eQTL 1.01e-01 0.141 0.0854 0.306 B_Memory LOneK1K
ENSG00000184752 NDUFA12 -157149 sc-eQTL 5.27e-01 -0.0376 0.0593 0.306 B_Memory LOneK1K
ENSG00000028203 VEZT -371147 sc-eQTL 9.54e-01 -0.00527 0.0916 0.306 B_Naive LOneK1K
ENSG00000057704 TMCC3 196042 sc-eQTL 2.88e-01 0.0988 0.0927 0.306 B_Naive LOneK1K
ENSG00000111142 METAP2 -626921 sc-eQTL 5.23e-02 0.148 0.0758 0.306 B_Naive LOneK1K
ENSG00000120798 NR2C1 -227029 sc-eQTL 6.06e-01 -0.0513 0.0994 0.306 B_Naive LOneK1K
ENSG00000136014 USP44 -704877 sc-eQTL 7.20e-01 -0.0316 0.0882 0.306 B_Naive LOneK1K
ENSG00000136040 PLXNC1 698022 sc-eQTL 9.76e-01 0.00228 0.0754 0.306 B_Naive LOneK1K
ENSG00000173588 CEP83 386611 sc-eQTL 9.07e-01 0.00922 0.0786 0.306 B_Naive LOneK1K
ENSG00000180263 FGD6 -370883 sc-eQTL 3.29e-01 0.0947 0.0968 0.306 B_Naive LOneK1K
ENSG00000184752 NDUFA12 -157149 sc-eQTL 4.49e-01 -0.0406 0.0535 0.306 B_Naive LOneK1K
ENSG00000028203 VEZT -371147 sc-eQTL 2.88e-01 -0.094 0.0883 0.306 CD14_Mono LOneK1K
ENSG00000057704 TMCC3 196042 sc-eQTL 7.65e-03 0.186 0.069 0.306 CD14_Mono LOneK1K
ENSG00000111142 METAP2 -626921 sc-eQTL 6.03e-01 0.0394 0.0757 0.306 CD14_Mono LOneK1K
ENSG00000120798 NR2C1 -227029 sc-eQTL 3.96e-02 0.169 0.0816 0.306 CD14_Mono LOneK1K
ENSG00000136040 PLXNC1 698022 sc-eQTL 1.02e-01 -0.101 0.0618 0.306 CD14_Mono LOneK1K
ENSG00000173588 CEP83 386611 sc-eQTL 3.14e-01 -0.0854 0.0845 0.306 CD14_Mono LOneK1K
ENSG00000180263 FGD6 -370883 sc-eQTL 1.32e-01 0.115 0.0761 0.306 CD14_Mono LOneK1K
ENSG00000184752 NDUFA12 -157149 sc-eQTL 2.18e-05 0.219 0.0503 0.306 CD14_Mono LOneK1K
ENSG00000028203 VEZT -371147 sc-eQTL 9.35e-01 -0.00814 0.1 0.308 CD16_Mono LOneK1K
ENSG00000057704 TMCC3 196042 sc-eQTL 8.20e-01 0.0212 0.0929 0.308 CD16_Mono LOneK1K
ENSG00000111142 METAP2 -626921 sc-eQTL 6.68e-01 -0.0394 0.0918 0.308 CD16_Mono LOneK1K
ENSG00000120798 NR2C1 -227029 sc-eQTL 9.27e-01 0.00947 0.103 0.308 CD16_Mono LOneK1K
ENSG00000136040 PLXNC1 698022 sc-eQTL 4.50e-01 0.0448 0.0592 0.308 CD16_Mono LOneK1K
ENSG00000173588 CEP83 386611 sc-eQTL 2.49e-01 -0.113 0.0982 0.308 CD16_Mono LOneK1K
ENSG00000180263 FGD6 -370883 sc-eQTL 6.16e-02 0.157 0.0834 0.308 CD16_Mono LOneK1K
ENSG00000184752 NDUFA12 -157149 sc-eQTL 3.46e-02 0.141 0.0664 0.308 CD16_Mono LOneK1K
ENSG00000028203 VEZT -371147 sc-eQTL 8.36e-01 -0.0188 0.0907 0.306 NK_CD56dim LOneK1K
ENSG00000057704 TMCC3 196042 sc-eQTL 4.21e-01 0.0682 0.0846 0.306 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 -626921 sc-eQTL 3.48e-01 0.068 0.0723 0.306 NK_CD56dim LOneK1K
ENSG00000120798 NR2C1 -227029 sc-eQTL 7.75e-01 0.0235 0.0821 0.306 NK_CD56dim LOneK1K
ENSG00000136040 PLXNC1 698022 sc-eQTL 8.63e-01 0.0125 0.072 0.306 NK_CD56dim LOneK1K
ENSG00000173588 CEP83 386611 sc-eQTL 2.87e-01 0.0864 0.0808 0.306 NK_CD56dim LOneK1K
ENSG00000184752 NDUFA12 -157149 sc-eQTL 2.31e-03 0.18 0.0582 0.306 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000180263 FGD6 -370883 eQTL 4.48e-07 0.107 0.021 0.0134 0.012 0.275
ENSG00000184752 NDUFA12 -157149 eQTL 1.08e-17 0.165 0.0189 0.0105 0.00603 0.275
ENSG00000236349 SUCLG2P2 298358 eQTL 0.0748 0.0441 0.0247 0.00117 0.0 0.275
ENSG00000278916 CEP83-DT 386596 eQTL 0.0341 0.0823 0.0388 0.0 0.0 0.275

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000180263 FGD6 -370883 1.27e-06 7.98e-07 2.15e-07 4.36e-07 1.18e-07 3.39e-07 6.51e-07 2.62e-07 7.56e-07 3.11e-07 1.07e-06 5.4e-07 1.03e-06 1.84e-07 3.72e-07 4.12e-07 6.29e-07 4.72e-07 3.51e-07 3.34e-07 2.26e-07 5.76e-07 4.77e-07 3.27e-07 1.28e-06 2.34e-07 4.9e-07 3.88e-07 6.62e-07 8.56e-07 4.02e-07 4.53e-08 9.79e-08 2.12e-07 3.6e-07 3e-07 1.64e-07 1.21e-07 8.61e-08 8.8e-09 1.79e-07 7.38e-07 7.23e-08 1.06e-08 1.81e-07 4.38e-08 1.41e-07 7.28e-08 6.27e-08
ENSG00000184752 NDUFA12 -157149 3.21e-06 2.63e-06 5.11e-07 1.85e-06 7.59e-07 7.8e-07 2.16e-06 8.27e-07 2.28e-06 1.15e-06 2.55e-06 1.57e-06 3.55e-06 1.35e-06 9.11e-07 1.98e-06 1.56e-06 2.19e-06 1.48e-06 1.23e-06 1.41e-06 3.1e-06 2.65e-06 1.46e-06 3.74e-06 1.07e-06 1.46e-06 1.84e-06 2.69e-06 2.37e-06 1.81e-06 4.34e-07 6.63e-07 1.33e-06 1.33e-06 9.67e-07 8.21e-07 4.2e-07 1.21e-06 4.17e-07 2.22e-07 3.49e-06 5.88e-07 1.89e-07 3.5e-07 3.87e-07 8.28e-07 2.32e-07 1.63e-07
ENSG00000236349 SUCLG2P2 298358 1.29e-06 9.3e-07 3.49e-07 5.24e-07 2.95e-07 4.63e-07 1.18e-06 3.38e-07 1.2e-06 3.95e-07 1.4e-06 6.03e-07 1.73e-06 2.59e-07 4.48e-07 8.27e-07 7.97e-07 5.36e-07 6.4e-07 7.04e-07 4.39e-07 1.19e-06 8.26e-07 6.28e-07 1.93e-06 3.75e-07 7.31e-07 7.19e-07 1.18e-06 1.23e-06 5.66e-07 1.73e-07 2.19e-07 5.46e-07 4.22e-07 4.52e-07 4.49e-07 1.57e-07 2.32e-07 1.54e-07 2.59e-07 1.48e-06 5.85e-08 1.95e-08 1.79e-07 1.14e-07 2.38e-07 8.37e-08 1.25e-07