Genes within 1Mb (chr12:109855873:G:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000076513 ANKRD13A -143313 eQTL 3.56e-02 0.026 0.0123 0.0 0.0 0.216
ENSG00000110921 MVK 282618 pQTL 3.57e-02 -0.0404 0.0192 0.0 0.0 0.212
ENSG00000111199 TRPV4 22472 eQTL 7.59e-19 -0.283 0.0312 0.0 0.0 0.216
ENSG00000111231 GPN3 -613395 eQTL 1.74e-03 -0.0798 0.0254 0.0 0.0 0.216
ENSG00000122986 HVCN1 -849077 eQTL 6.11e-02 0.0303 0.0162 0.00122 0.0 0.216
ENSG00000139433 GLTP -24668 eQTL 4.06e-06 -0.0854 0.0184 0.0 0.0 0.216
ENSG00000139437 TCHP -44401 eQTL 2.78e-02 0.042 0.0191 0.0 0.0 0.216
ENSG00000151164 RAD9B -645782 eQTL 7.77e-02 0.0802 0.0454 0.00119 0.0 0.216
ENSG00000174456 C12orf76 -217761 eQTL 4.51e-02 0.0474 0.0236 0.0 0.0 0.216
ENSG00000186298 PPP1CC -887066 eQTL 4.44e-02 -0.0285 0.0142 0.0 0.0 0.216
ENSG00000204852 TCTN1 -758154 eQTL 6.95e-03 0.0477 0.0176 0.0 0.0 0.216
ENSG00000277595 AC007546.1 -176372 eQTL 4.03e-02 0.0386 0.0188 0.0 0.0 0.216


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000076248 \N 758299 2.74e-07 1.25e-07 5.03e-08 1.82e-07 9.01e-08 9.65e-08 1.42e-07 5.49e-08 1.41e-07 4.24e-08 1.56e-07 8.03e-08 1.41e-07 6.56e-08 5.53e-08 7.5e-08 3.88e-08 1.14e-07 5.39e-08 4.2e-08 1.19e-07 1.26e-07 1.32e-07 4.53e-08 1.31e-07 1.19e-07 1.08e-07 9.15e-08 1.05e-07 1.1e-07 9.58e-08 4.1e-08 3.61e-08 8.68e-08 8.93e-08 3.53e-08 5.45e-08 9.36e-08 7.58e-08 3.18e-08 2.99e-08 1.33e-07 4.59e-08 4.13e-08 5.19e-08 1.69e-08 1.22e-07 3.99e-09 5.09e-08
ENSG00000076513 ANKRD13A -143313 5.2e-06 8.81e-06 2.51e-06 3.17e-06 6.3e-07 1.19e-06 2.91e-06 8.04e-07 3.56e-06 1.01e-06 4.08e-06 1.4e-06 7.06e-06 2.39e-06 1.13e-06 2.96e-06 3.28e-06 2.75e-06 1.41e-06 1.34e-06 3.11e-06 4.53e-06 4.56e-06 1.84e-06 4.84e-06 1.23e-06 2.51e-06 1.84e-06 4.41e-06 4.13e-06 2.04e-06 4.91e-07 6.85e-07 1.74e-06 1.98e-06 1.17e-06 1.07e-06 4.93e-07 1.05e-06 3.46e-07 3.68e-07 7.45e-06 2.46e-06 1.33e-07 3.58e-07 3.88e-07 7.44e-07 2.42e-07 3.6e-07
ENSG00000111199 TRPV4 22472 3.17e-05 3.29e-05 5.99e-06 1.51e-05 4.91e-06 1.29e-05 4.15e-05 4.07e-06 2.82e-05 1.38e-05 3.52e-05 1.48e-05 4.54e-05 1.3e-05 6.59e-06 1.73e-05 1.56e-05 2.28e-05 7.52e-06 6.34e-06 1.36e-05 2.94e-05 2.94e-05 8.24e-06 4.05e-05 7.01e-06 1.28e-05 1.18e-05 3.04e-05 2.32e-05 1.83e-05 1.63e-06 2.37e-06 6.67e-06 1.05e-05 5.45e-06 2.82e-06 3.13e-06 4.25e-06 3.11e-06 1.63e-06 3.61e-05 3.04e-06 3.57e-07 2.04e-06 3.59e-06 3.88e-06 1.44e-06 1.59e-06
ENSG00000189046 \N 762385 2.74e-07 1.25e-07 4.98e-08 1.82e-07 9.01e-08 9.65e-08 1.42e-07 5.49e-08 1.41e-07 4.24e-08 1.56e-07 8.03e-08 1.41e-07 6.56e-08 5.53e-08 7.5e-08 3.88e-08 1.14e-07 5.39e-08 4.2e-08 1.19e-07 1.26e-07 1.32e-07 4.53e-08 1.31e-07 1.15e-07 1.08e-07 9.15e-08 1.05e-07 1.1e-07 9.58e-08 3.68e-08 3.56e-08 8.68e-08 8.93e-08 3.53e-08 5.59e-08 9.36e-08 7.58e-08 3.18e-08 2.99e-08 1.33e-07 4.53e-08 4.11e-08 5.19e-08 1.69e-08 1.22e-07 3.99e-09 5.09e-08
ENSG00000277595 AC007546.1 -176372 4.19e-06 4.88e-06 1.34e-06 1.92e-06 4.37e-07 8.62e-07 1.8e-06 3.77e-07 1.85e-06 6.9e-07 2.43e-06 9.81e-07 4.58e-06 1.39e-06 9.24e-07 1.54e-06 2.06e-06 2.3e-06 1.49e-06 8.79e-07 1.81e-06 3.09e-06 3.2e-06 9.82e-07 3.5e-06 9.87e-07 1.42e-06 1.77e-06 3.19e-06 2.29e-06 1.55e-06 2.49e-07 7.33e-07 1.22e-06 9.14e-07 8.67e-07 9.24e-07 4.74e-07 1.11e-06 2.32e-07 2.56e-07 4.75e-06 1.8e-06 1.58e-07 2.91e-07 3.28e-07 6.75e-07 1.44e-07 1.75e-07