Genes within 1Mb (chr12:109669963:A:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000110880 CORO1C 938367 eQTL 7.55e-02 0.0334 0.0188 0.00112 0.0 0.273
ENSG00000111231 GPN3 -799305 eQTL 7.63e-01 -0.00708 0.0235 0.00126 0.0 0.273
ENSG00000111237 VPS29 -832154 eQTL 4.66e-02 0.0254 0.0128 0.0 0.0 0.273
ENSG00000135093 USP30 646874 eQTL 1.68e-02 -0.047 0.0196 0.0 0.0 0.273
ENSG00000151148 UBE3B 192561 eQTL 3.20e-02 0.0369 0.0172 0.0 0.0 0.273
ENSG00000151164 RAD9B -831692 eQTL 8.20e-02 0.0726 0.0417 0.00133 0.0 0.273
ENSG00000277299 AC084876.1 -278426 eQTL 3.68e-02 -0.0659 0.0315 0.00167 0.0 0.273


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000135093 USP30 646874 3.27e-07 1.56e-07 6.55e-08 2.27e-07 1.02e-07 7.75e-08 2.4e-07 5.82e-08 1.75e-07 9.72e-08 1.69e-07 1.37e-07 2.45e-07 8.07e-08 5.97e-08 9.01e-08 4.35e-08 1.8e-07 7.29e-08 5.61e-08 1.18e-07 1.7e-07 1.68e-07 4.07e-08 2.17e-07 1.39e-07 1.23e-07 1.17e-07 1.37e-07 1.33e-07 1.26e-07 4.47e-08 4.23e-08 9.08e-08 4.04e-08 2.74e-08 4.47e-08 7.63e-08 6.29e-08 6.19e-08 4.83e-08 1.6e-07 3.35e-08 1.1e-08 3.61e-08 8.31e-09 7.61e-08 2e-09 4.94e-08
ENSG00000139428 \N 96383 4.53e-06 4.98e-06 6.91e-07 3.14e-06 1.62e-06 1.58e-06 5.17e-06 9.79e-07 5.09e-06 2.47e-06 5.56e-06 3.45e-06 7.64e-06 2.04e-06 1.31e-06 3.71e-06 1.8e-06 3.49e-06 1.57e-06 1.15e-06 3.1e-06 4.97e-06 4.6e-06 1.55e-06 7.08e-06 1.97e-06 2.49e-06 1.87e-06 4.41e-06 4.67e-06 2.85e-06 4.38e-07 7.03e-07 1.65e-06 2.07e-06 1.17e-06 1.02e-06 4.39e-07 8.84e-07 5e-07 7.1e-07 5.71e-06 4.02e-07 1.61e-07 5.77e-07 9.32e-07 1.05e-06 5.06e-07 4.54e-07
ENSG00000151148 UBE3B 192561 1.96e-06 2.09e-06 2.97e-07 1.43e-06 4.93e-07 7.23e-07 1.29e-06 4.17e-07 1.77e-06 6.73e-07 1.84e-06 1.32e-06 3.24e-06 8.3e-07 4.52e-07 1.06e-06 1.12e-06 1.34e-06 5.56e-07 7.96e-07 6.35e-07 1.96e-06 1.65e-06 9.74e-07 2.63e-06 1.01e-06 1.14e-06 1.05e-06 1.68e-06 1.66e-06 7.71e-07 2.83e-07 4.59e-07 8.88e-07 8.76e-07 6.2e-07 7.47e-07 3.65e-07 7.27e-07 1.68e-07 1.98e-07 2.66e-06 4.24e-07 1.74e-07 3.67e-07 3.32e-07 4.08e-07 1.97e-07 2.83e-07
ENSG00000151164 RAD9B -831692 2.76e-07 1.27e-07 4.98e-08 1.83e-07 9.24e-08 9.48e-08 1.6e-07 5.48e-08 1.45e-07 5.67e-08 1.52e-07 1.01e-07 1.59e-07 7.13e-08 6.12e-08 7.49e-08 4.09e-08 1.33e-07 6.07e-08 4.78e-08 1.21e-07 1.24e-07 1.45e-07 2.91e-08 1.55e-07 1.25e-07 1.1e-07 9.74e-08 1.2e-07 1e-07 1.02e-07 3.1e-08 3.73e-08 8.23e-08 5.99e-08 3.2e-08 5.59e-08 8.61e-08 6.57e-08 4.55e-08 5.8e-08 1.4e-07 5.21e-08 1.11e-08 3.4e-08 1.86e-08 1.21e-07 3.78e-09 5.02e-08
ENSG00000196850 \N -913355 2.74e-07 1.3e-07 4.48e-08 1.86e-07 9.16e-08 9.76e-08 1.53e-07 5.4e-08 1.45e-07 4.94e-08 1.57e-07 9e-08 1.47e-07 6.76e-08 6.04e-08 7.53e-08 3.87e-08 1.27e-07 5.75e-08 4.23e-08 1.13e-07 1.27e-07 1.39e-07 2.95e-08 1.46e-07 1.14e-07 1.07e-07 9.65e-08 1.12e-07 1.03e-07 9.7e-08 3.66e-08 3.66e-08 8.34e-08 7.51e-08 3.62e-08 4.99e-08 9.36e-08 6.59e-08 3.8e-08 5.34e-08 1.35e-07 5.22e-08 1.45e-08 4.25e-08 1.83e-08 1.22e-07 3.81e-09 4.9e-08
ENSG00000256262 \N 616011 3.62e-07 1.67e-07 6.45e-08 2.25e-07 1.05e-07 8.85e-08 2.63e-07 5.89e-08 1.86e-07 1.05e-07 1.86e-07 1.52e-07 2.94e-07 8.44e-08 6.2e-08 9.48e-08 5.27e-08 2.04e-07 7.27e-08 6.73e-08 1.24e-07 1.81e-07 1.75e-07 4.15e-08 2.36e-07 1.51e-07 1.25e-07 1.28e-07 1.34e-07 1.46e-07 1.26e-07 4.77e-08 4.27e-08 9.72e-08 5.65e-08 3.24e-08 4.84e-08 7.68e-08 5.59e-08 6.79e-08 4.79e-08 1.55e-07 3.02e-08 1.43e-08 4.06e-08 6.68e-09 7.52e-08 2.07e-09 4.67e-08
ENSG00000277299 AC084876.1 -278426 1.32e-06 9.82e-07 3.29e-07 7.82e-07 2.79e-07 4.81e-07 1.41e-06 3.34e-07 1.32e-06 4.24e-07 1.48e-06 6.16e-07 2.01e-06 2.7e-07 5.65e-07 8.25e-07 7.93e-07 5.99e-07 7.4e-07 6.9e-07 4.48e-07 1.27e-06 9.29e-07 6.51e-07 2.05e-06 3.87e-07 7.73e-07 7.68e-07 1.24e-06 1.27e-06 6.16e-07 1.56e-07 1.99e-07 6.99e-07 5.2e-07 4.69e-07 5.02e-07 1.67e-07 3.93e-07 2.49e-07 2.72e-07 1.5e-06 5.94e-08 4.15e-08 1.67e-07 1.22e-07 2.27e-07 7.69e-08 1.06e-07