Genes within 1Mb (chr12:109576250:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000076555 ACACB 459655 eQTL 2.37e-09 0.224 0.0372 0.0 0.0 0.104
ENSG00000084112 SSH1 718660 eQTL 3.08e-03 -0.0676 0.0228 0.0 0.0 0.104
ENSG00000110906 KCTD10 98891 eQTL 1.46e-37 -0.34 0.0254 0.00329 0.00192 0.104
ENSG00000111199 TRPV4 -257151 eQTL 1.03e-02 0.111 0.0433 0.0 0.0 0.104
ENSG00000111231 GPN3 -893018 eQTL 3.57e-08 0.187 0.0336 0.0 0.0 0.104
ENSG00000139428 MMAB 2670 eQTL 6.97e-03 0.0848 0.0314 0.0 0.0 0.104
ENSG00000139437 TCHP -324024 eQTL 2.02e-11 -0.169 0.0249 0.0 0.0 0.104
ENSG00000151148 UBE3B 98848 eQTL 2.82e-04 0.0906 0.0249 0.00147 0.0 0.104
ENSG00000256262 USP30-AS1 522298 eQTL 1.17e-02 -0.0637 0.0252 0.0 0.0 0.104


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000076555 ACACB 459655 2.64e-06 5.22e-06 7.72e-07 2.96e-06 4.59e-07 8.14e-07 2.43e-06 8.2e-07 2.74e-06 1.19e-06 3.13e-06 1.67e-06 5.6e-06 1.66e-06 1.35e-06 2.63e-06 2.73e-06 2.75e-06 1.46e-06 1.07e-06 1.95e-06 4.27e-06 3.34e-06 1.54e-06 4.62e-06 1.37e-06 1.82e-06 1.81e-06 3.79e-06 2.87e-06 2.08e-06 5.42e-07 6.21e-07 1.6e-06 2.19e-06 1.06e-06 1.01e-06 4.25e-07 1.07e-06 4.27e-07 1.96e-07 3.89e-06 5.44e-07 1.64e-07 2.74e-07 5.87e-07 8.93e-07 2.07e-07 2.59e-07
ENSG00000110906 KCTD10 98891 1.69e-05 2.37e-05 4.84e-06 1.21e-05 3.26e-06 7.21e-06 2.58e-05 3.4e-06 1.88e-05 9.47e-06 2.26e-05 9.57e-06 3.03e-05 7.86e-06 5.99e-06 1.23e-05 1.11e-05 1.6e-05 5.31e-06 4.51e-06 8.81e-06 2.19e-05 2.05e-05 5.78e-06 3.17e-05 5.98e-06 8.52e-06 8.34e-06 1.98e-05 1.61e-05 1.19e-05 1.67e-06 1.66e-06 5.34e-06 8.98e-06 4.51e-06 2.4e-06 2.82e-06 3.62e-06 2.3e-06 1.64e-06 2.36e-05 2.7e-06 3.78e-07 1.67e-06 2.85e-06 3.25e-06 1.47e-06 1.01e-06
ENSG00000111199 TRPV4 -257151 6.01e-06 1.21e-05 2.47e-06 4.82e-06 1.46e-06 1.53e-06 9.53e-06 1.29e-06 6.66e-06 3.58e-06 8.76e-06 3.9e-06 1.13e-05 3.81e-06 3.21e-06 6.33e-06 6.37e-06 5.78e-06 2.57e-06 2.63e-06 4.54e-06 8.57e-06 6.79e-06 2.46e-06 1.25e-05 3.61e-06 4.46e-06 3.31e-06 7.5e-06 7.58e-06 3.37e-06 1.03e-06 8.28e-07 2.98e-06 3.64e-06 2.66e-06 1.77e-06 1.29e-06 1.61e-06 8.62e-07 8.4e-07 8.29e-06 1.37e-06 3.6e-07 7.17e-07 1.57e-06 9.95e-07 7.19e-07 5.28e-07
ENSG00000111231 GPN3 -893018 1.07e-06 9.83e-07 2.56e-07 1.1e-06 1.11e-07 3.11e-07 9.92e-07 2.64e-07 8.66e-07 3.17e-07 1.16e-06 5.22e-07 1.59e-06 2.68e-07 4.53e-07 5.75e-07 9.34e-07 5.45e-07 4.65e-07 3.57e-07 3.24e-07 1.11e-06 7.15e-07 2.6e-07 1.69e-06 3.17e-07 6.13e-07 6e-07 7.61e-07 1.02e-06 4.55e-07 3.67e-08 4.92e-08 6.99e-07 5.49e-07 4.81e-07 7.36e-07 1.26e-07 2.94e-07 1.86e-07 1.46e-07 1.08e-06 4.3e-08 4.19e-08 2.03e-07 1.28e-07 1.08e-07 2.38e-08 4.68e-08
ENSG00000135093 \N 553161 1.61e-06 4.35e-06 8.15e-07 1.95e-06 4.27e-07 6.63e-07 1.61e-06 4.77e-07 1.76e-06 7.98e-07 2.02e-06 1.45e-06 3.43e-06 1.36e-06 8.98e-07 1.61e-06 2e-06 2.25e-06 8.1e-07 1.13e-06 1.11e-06 3.12e-06 2.32e-06 9.14e-07 3.46e-06 1.03e-06 1.34e-06 1.78e-06 1.8e-06 1.84e-06 9.11e-07 4.33e-07 3.79e-07 1.49e-06 1.73e-06 9.19e-07 9.63e-07 3.82e-07 1.18e-06 3.81e-07 3.16e-07 2.84e-06 4.1e-07 1.69e-07 3.55e-07 3.43e-07 4.03e-07 2.65e-07 1.04e-07
ENSG00000139433 \N -304291 4.83e-06 9.74e-06 2.3e-06 3.95e-06 1.62e-06 1.53e-06 7.68e-06 1.17e-06 4.81e-06 2.76e-06 6.76e-06 2.94e-06 9.55e-06 2.8e-06 2.24e-06 5.75e-06 4.97e-06 3.78e-06 1.65e-06 1.98e-06 3.02e-06 7.62e-06 5.07e-06 1.91e-06 9.79e-06 2.77e-06 3.41e-06 2.43e-06 6.27e-06 5.51e-06 2.62e-06 9.58e-07 7.57e-07 2.75e-06 2.8e-06 2.09e-06 1.85e-06 5.14e-07 1.36e-06 7.47e-07 7.14e-07 7.55e-06 8.82e-07 2.8e-07 6.1e-07 1.02e-06 9.77e-07 6.12e-07 3.26e-07
ENSG00000139437 TCHP -324024 4.54e-06 9.64e-06 1.9e-06 3.85e-06 1.32e-06 1.35e-06 6.72e-06 1.07e-06 4.65e-06 2.65e-06 6.14e-06 3.37e-06 8.72e-06 2.19e-06 2.01e-06 5.1e-06 4.62e-06 3.86e-06 1.5e-06 1.72e-06 2.73e-06 7.44e-06 4.69e-06 1.81e-06 9.12e-06 2.35e-06 2.91e-06 2.11e-06 5.6e-06 4.97e-06 2.85e-06 7.85e-07 7.03e-07 2.78e-06 2.47e-06 2.11e-06 1.76e-06 4.36e-07 1.29e-06 7.13e-07 6.15e-07 6.85e-06 7.85e-07 2.64e-07 4.86e-07 8.06e-07 1.14e-06 6.82e-07 3.35e-07
ENSG00000151148 UBE3B 98848 1.69e-05 2.37e-05 4.84e-06 1.21e-05 3.26e-06 7.21e-06 2.58e-05 3.4e-06 1.88e-05 9.47e-06 2.26e-05 9.57e-06 3.03e-05 7.86e-06 5.99e-06 1.23e-05 1.11e-05 1.6e-05 5.31e-06 4.51e-06 8.81e-06 2.19e-05 2.05e-05 5.78e-06 3.17e-05 5.98e-06 8.52e-06 8.34e-06 1.98e-05 1.61e-05 1.19e-05 1.67e-06 1.66e-06 5.34e-06 8.98e-06 4.51e-06 2.4e-06 2.82e-06 3.62e-06 2.3e-06 1.64e-06 2.36e-05 2.7e-06 3.78e-07 1.67e-06 2.85e-06 3.25e-06 1.47e-06 1.01e-06
ENSG00000256262 USP30-AS1 522298 1.92e-06 4.7e-06 7.29e-07 2.1e-06 4.87e-07 6.41e-07 1.94e-06 6.01e-07 1.88e-06 8.34e-07 2.47e-06 1.29e-06 3.69e-06 1.36e-06 9.69e-07 2.11e-06 1.96e-06 2.12e-06 1.22e-06 1.28e-06 1.34e-06 3.36e-06 2.65e-06 9.56e-07 4.08e-06 1.26e-06 1.47e-06 1.72e-06 2.17e-06 1.95e-06 1.29e-06 4.73e-07 4.16e-07 1.82e-06 1.92e-06 8.53e-07 9.76e-07 4.21e-07 1.23e-06 3.63e-07 3.2e-07 3.26e-06 4.41e-07 1.81e-07 3.99e-07 3.52e-07 4.97e-07 2.4e-07 1.36e-07