Genes within 1Mb (chr12:109557292:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000084112 SSH1 699702 eQTL 1.25e-02 -0.0382 0.0153 0.0 0.0 0.292
ENSG00000110876 SELPLG 923333 pQTL 3.94e-02 -0.0605 0.0293 0.0 0.0 0.298
ENSG00000110906 KCTD10 79933 eQTL 9.63e-62 -0.287 0.016 0.0 0.0013 0.292
ENSG00000110921 MVK -15963 pQTL 2.33e-05 -0.0704 0.0166 0.00877 0.0085 0.298
ENSG00000110921 MVK -15963 eQTL 8.37e-16 -0.187 0.0229 0.0 0.0 0.292
ENSG00000111231 GPN3 -911976 eQTL 1.62e-04 0.0858 0.0227 0.0 0.0 0.292
ENSG00000139428 MMAB -16288 eQTL 1.81e-04 -0.0786 0.0209 0.0 0.0 0.292
ENSG00000139436 GIT2 -439097 eQTL 2.17e-02 -0.0238 0.0104 0.00158 0.0 0.292
ENSG00000139437 TCHP -342982 eQTL 6.56e-07 -0.0844 0.0169 0.0 0.0 0.292
ENSG00000151148 UBE3B 79890 eQTL 2.13e-06 0.079 0.0166 0.0 0.0 0.292


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000110906 KCTD10 79933 1.3e-05 1.57e-05 3.99e-06 1.22e-05 3.6e-06 8.91e-06 2.6e-05 3.73e-06 1.94e-05 1.07e-05 2.37e-05 1.01e-05 3.08e-05 8.31e-06 4.71e-06 1.15e-05 9.64e-06 1.57e-05 5.39e-06 5.19e-06 9.77e-06 2e-05 1.72e-05 6.36e-06 3.32e-05 5.36e-06 8.23e-06 8.34e-06 1.93e-05 1.67e-05 1.29e-05 1.63e-06 1.56e-06 4.87e-06 1.03e-05 4.56e-06 2.62e-06 2.97e-06 3.25e-06 2.73e-06 1.85e-06 2.08e-05 2.6e-06 4.6e-07 2.07e-06 2.84e-06 3.46e-06 1.44e-06 1.52e-06
ENSG00000110921 MVK -15963 5.86e-05 5.68e-05 1.22e-05 2.54e-05 1.13e-05 2.64e-05 7.29e-05 1.03e-05 6.63e-05 3.49e-05 8.76e-05 3.54e-05 9.58e-05 2.59e-05 1.27e-05 4.4e-05 3.57e-05 4.64e-05 1.4e-05 1.54e-05 3.22e-05 7.18e-05 5.33e-05 1.87e-05 8.67e-05 1.95e-05 2.86e-05 2.99e-05 5.69e-05 4.8e-05 4.26e-05 4.5e-06 6.07e-06 1.25e-05 2.06e-05 1.14e-05 6.29e-06 7.11e-06 9.93e-06 4.94e-06 3.02e-06 6.24e-05 6.17e-06 1.11e-06 5.9e-06 9.1e-06 9.01e-06 4.46e-06 3.08e-06
ENSG00000111231 GPN3 -911976 2.66e-07 1.16e-07 4.91e-08 1.97e-07 9.16e-08 9.91e-08 1.6e-07 5.2e-08 1.41e-07 4.74e-08 1.62e-07 8.68e-08 1.33e-07 7.13e-08 6e-08 7.53e-08 4.48e-08 1.33e-07 7.12e-08 4.21e-08 1.27e-07 1.27e-07 1.45e-07 2.93e-08 1.46e-07 1.16e-07 1.06e-07 9.65e-08 1.16e-07 1.1e-07 9.64e-08 3.93e-08 4.27e-08 9.3e-08 3.81e-08 3.28e-08 9.11e-08 6.56e-08 6.71e-08 3.67e-08 3.17e-08 1.33e-07 3.99e-08 2e-08 4.25e-08 1.92e-08 1.15e-07 2.13e-09 4.8e-08
ENSG00000136003 \N 994691 2.66e-07 1.1e-07 3.88e-08 1.82e-07 9.01e-08 9.8e-08 1.53e-07 5.33e-08 1.41e-07 4.57e-08 1.56e-07 8.36e-08 1.26e-07 6.56e-08 5.53e-08 7.37e-08 4.94e-08 1.21e-07 6.07e-08 4.04e-08 1.22e-07 1.26e-07 1.39e-07 3.49e-08 1.37e-07 1.14e-07 1.11e-07 9.36e-08 1.08e-07 1.11e-07 9.91e-08 3.06e-08 3.46e-08 8.23e-08 5.64e-08 3.62e-08 6.57e-08 5.92e-08 6.59e-08 4.47e-08 4.53e-08 1.33e-07 5.12e-08 7.26e-09 5.19e-08 1.84e-08 1.22e-07 1.93e-09 5.04e-08
ENSG00000139428 MMAB -16288 5.81e-05 5.65e-05 1.21e-05 2.53e-05 1.12e-05 2.64e-05 7.21e-05 1.02e-05 6.63e-05 3.49e-05 8.76e-05 3.51e-05 9.58e-05 2.57e-05 1.25e-05 4.35e-05 3.57e-05 4.64e-05 1.4e-05 1.52e-05 3.22e-05 7.08e-05 5.28e-05 1.85e-05 8.54e-05 1.9e-05 2.86e-05 2.93e-05 5.69e-05 4.74e-05 4.25e-05 4.37e-06 6.08e-06 1.24e-05 2.03e-05 1.13e-05 6.25e-06 7.01e-06 9.77e-06 4.91e-06 2.93e-06 6.17e-05 5.99e-06 1.04e-06 5.78e-06 9.01e-06 8.87e-06 4.34e-06 3.01e-06
ENSG00000139437 TCHP -342982 1.21e-06 9.03e-07 2.19e-07 1.21e-06 2.71e-07 5.92e-07 1.5e-06 3.37e-07 1.14e-06 4.28e-07 1.35e-06 6.45e-07 1.75e-06 2.98e-07 4.95e-07 9.14e-07 7.43e-07 7.83e-07 7.22e-07 5.13e-07 6.44e-07 1.3e-06 9.28e-07 5.66e-07 2.24e-06 4.11e-07 6.18e-07 9.36e-07 1.35e-06 1.22e-06 5.45e-07 3.27e-07 3.94e-07 5.89e-07 5.76e-07 5.31e-07 7.18e-07 4.48e-07 4.58e-07 2.79e-07 6.93e-07 1.49e-06 4.93e-07 1.81e-07 1.81e-07 1.72e-07 4.03e-07 2.07e-07 2.32e-07
ENSG00000151148 UBE3B 79890 1.3e-05 1.57e-05 3.99e-06 1.24e-05 3.64e-06 8.91e-06 2.6e-05 3.73e-06 1.94e-05 1.07e-05 2.37e-05 1.01e-05 3.08e-05 8.31e-06 4.71e-06 1.15e-05 9.64e-06 1.57e-05 5.39e-06 5.19e-06 9.77e-06 2e-05 1.72e-05 6.36e-06 3.32e-05 5.5e-06 8.23e-06 8.34e-06 1.93e-05 1.67e-05 1.29e-05 1.63e-06 1.61e-06 4.87e-06 1.03e-05 4.56e-06 2.62e-06 2.97e-06 3.25e-06 2.73e-06 1.85e-06 2.08e-05 2.6e-06 4.6e-07 2.07e-06 2.84e-06 3.46e-06 1.44e-06 1.52e-06