Genes within 1Mb (chr12:108698233:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000075856 SART3 136833 eQTL 2.63e-03 0.06 0.0199 0.0 0.0 0.296
ENSG00000084112 SSH1 -159357 eQTL 1.33e-13 -0.111 0.0148 0.00279 0.00931 0.296
ENSG00000110906 KCTD10 -779126 eQTL 3.19e-03 -0.0544 0.0184 0.0 0.0 0.296
ENSG00000136003 ISCU 135632 eQTL 1.36e-03 0.0839 0.0261 0.0 0.0 0.296
ENSG00000174600 CMKLR1 358916 eQTL 2.04e-02 0.0361 0.0155 0.0 0.0 0.296
ENSG00000183160 TMEM119 99913 eQTL 1.17e-05 -0.0743 0.0169 0.0 0.0 0.296
ENSG00000256262 USP30-AS1 -355719 eQTL 2.28e-02 0.0383 0.0168 0.00128 0.0 0.296
ENSG00000257221 AC007569.1 69546 eQTL 3.92e-01 0.0276 0.0322 0.0218 0.0 0.296
ENSG00000274598 AC087893.1 -136151 eQTL 3.05e-03 -0.0815 0.0274 0.0 0.0 0.296


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000084112 SSH1 -159357 1.6e-06 2.49e-06 2.42e-07 1.57e-06 4.73e-07 7.87e-07 1.32e-06 3.9e-07 1.78e-06 7.24e-07 1.99e-06 1.39e-06 3.23e-06 1.15e-06 3.84e-07 1.1e-06 9.86e-07 1.16e-06 5.3e-07 6.51e-07 6.41e-07 2.32e-06 1.77e-06 8.33e-07 3.39e-06 8.82e-07 1.14e-06 1.3e-06 1.74e-06 1.72e-06 1.07e-06 2.45e-07 3.24e-07 7.02e-07 9.09e-07 5.24e-07 6.81e-07 3.92e-07 5.37e-07 2.31e-07 3.53e-07 2.75e-06 3.9e-07 1.93e-07 3.22e-07 2.99e-07 4.12e-07 9.32e-08 1.85e-07
ENSG00000136003 ISCU 135632 2.18e-06 3.09e-06 2.74e-07 2.03e-06 4.72e-07 7.88e-07 1.86e-06 6.19e-07 1.89e-06 9.75e-07 2.49e-06 1.63e-06 3.5e-06 1.43e-06 8.27e-07 1.48e-06 1.34e-06 1.68e-06 1.09e-06 1.16e-06 9.86e-07 3.1e-06 2.3e-06 9.95e-07 4.11e-06 1.21e-06 1.29e-06 1.8e-06 1.92e-06 2.24e-06 1.94e-06 2.48e-07 3.98e-07 1.22e-06 1.33e-06 6.03e-07 7.59e-07 4.57e-07 7.04e-07 1.68e-07 3.03e-07 3.38e-06 4.24e-07 1.86e-07 3.43e-07 3.14e-07 7.75e-07 2.1e-07 2.8e-07
ENSG00000174600 CMKLR1 358916 5.59e-07 5.74e-07 8.67e-08 3.96e-07 1.07e-07 1.97e-07 4.93e-07 1.21e-07 4.19e-07 2.28e-07 5.93e-07 3.5e-07 6.47e-07 1.41e-07 1.68e-07 1.92e-07 2.53e-07 3.02e-07 1.97e-07 1.39e-07 1.92e-07 3.71e-07 3.19e-07 1.25e-07 7.94e-07 2.33e-07 2.43e-07 2.71e-07 2.57e-07 5.36e-07 2.6e-07 6.2e-08 5.51e-08 1.16e-07 3.08e-07 5.7e-08 1.02e-07 1.1e-07 4.44e-08 5.96e-08 7.48e-08 4.82e-07 2.67e-08 3.38e-08 8.06e-08 1.31e-08 1.11e-07 3.2e-09 5.71e-08
ENSG00000183160 TMEM119 99913 4.04e-06 5e-06 5.33e-07 2.13e-06 1.08e-06 1.19e-06 3e-06 9.75e-07 3.49e-06 1.94e-06 4.29e-06 3.52e-06 6.82e-06 2.35e-06 1.18e-06 2.23e-06 2.02e-06 2.09e-06 1.37e-06 1.05e-06 1.96e-06 4.56e-06 3.49e-06 1.8e-06 6.11e-06 1.28e-06 2e-06 1.47e-06 3.88e-06 4e-06 2.19e-06 4.17e-07 5.79e-07 1.59e-06 2.1e-06 9.34e-07 8.92e-07 4.91e-07 1.35e-06 4.17e-07 2.26e-07 5.18e-06 4.44e-07 1.63e-07 3.22e-07 3.92e-07 6.8e-07 2.46e-07 1.9e-07
ENSG00000274598 AC087893.1 -136151 2.14e-06 3.13e-06 2.74e-07 1.96e-06 4.71e-07 7.7e-07 1.87e-06 6.34e-07 1.89e-06 9.88e-07 2.48e-06 1.57e-06 3.49e-06 1.4e-06 8.08e-07 1.48e-06 1.36e-06 1.62e-06 1.05e-06 1.16e-06 9.51e-07 3.09e-06 2.35e-06 9.95e-07 4.03e-06 1.22e-06 1.28e-06 1.79e-06 1.91e-06 2.23e-06 1.9e-06 2.48e-07 3.79e-07 1.23e-06 1.31e-06 6.03e-07 7.42e-07 4.57e-07 7.04e-07 2.18e-07 3.03e-07 3.35e-06 4.23e-07 1.86e-07 3.43e-07 3.13e-07 7.88e-07 2.1e-07 2.79e-07