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Genes within 1Mb (chr12:108589589:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075856 SART3 28189 sc-eQTL 1.12e-01 -0.34 0.213 0.948 CD4_CTL L2
ENSG00000076248 UNG -507985 sc-eQTL 9.28e-01 0.0174 0.193 0.948 CD4_CTL L2
ENSG00000076555 ACACB -527006 sc-eQTL 3.10e-01 -0.185 0.182 0.948 CD4_CTL L2
ENSG00000084112 SSH1 -268001 sc-eQTL 2.69e-01 0.217 0.196 0.948 CD4_CTL L2
ENSG00000110851 PRDM4 828317 sc-eQTL 6.92e-01 0.0806 0.203 0.948 CD4_CTL L2
ENSG00000110876 SELPLG -44370 sc-eQTL 9.27e-01 0.0127 0.139 0.948 CD4_CTL L2
ENSG00000110906 KCTD10 -887770 sc-eQTL 6.09e-01 -0.11 0.214 0.948 CD4_CTL L2
ENSG00000110921 MVK -983666 sc-eQTL 8.62e-02 -0.335 0.195 0.948 CD4_CTL L2
ENSG00000135093 USP30 -433500 sc-eQTL 5.65e-01 0.113 0.197 0.948 CD4_CTL L2
ENSG00000136003 ISCU 27007 sc-eQTL 4.03e-02 -0.368 0.178 0.948 CD4_CTL L2
ENSG00000136045 PWP1 903790 sc-eQTL 5.47e-01 0.123 0.204 0.948 CD4_CTL L2
ENSG00000139428 MMAB -983991 sc-eQTL 9.51e-02 0.346 0.206 0.948 CD4_CTL L2
ENSG00000151148 UBE3B -887813 sc-eQTL 2.09e-01 -0.268 0.212 0.948 CD4_CTL L2
ENSG00000189046 ALKBH2 -504042 sc-eQTL 7.68e-01 -0.0604 0.204 0.948 CD4_CTL L2
ENSG00000198855 FICD 74312 sc-eQTL 8.09e-01 -0.0449 0.185 0.948 CD4_CTL L2
ENSG00000256139 AC007637.1 -521629 sc-eQTL 7.66e-02 0.274 0.154 0.948 CD4_CTL L2
ENSG00000256262 USP30-AS1 -464363 sc-eQTL 9.35e-01 -0.0168 0.205 0.948 CD4_CTL L2
ENSG00000075856 SART3 28189 sc-eQTL 6.13e-01 0.111 0.219 0.949 CD8_TCM L2
ENSG00000076248 UNG -507985 sc-eQTL 4.59e-01 0.142 0.191 0.949 CD8_TCM L2
ENSG00000076555 ACACB -527006 sc-eQTL 6.58e-01 0.0883 0.199 0.949 CD8_TCM L2
ENSG00000084112 SSH1 -268001 sc-eQTL 9.48e-01 0.0135 0.207 0.949 CD8_TCM L2
ENSG00000110851 PRDM4 828317 sc-eQTL 9.35e-01 0.0156 0.191 0.949 CD8_TCM L2
ENSG00000110876 SELPLG -44370 sc-eQTL 7.30e-01 -0.0428 0.124 0.949 CD8_TCM L2
ENSG00000110880 CORO1C -142007 sc-eQTL 2.16e-01 0.227 0.183 0.949 CD8_TCM L2
ENSG00000110906 KCTD10 -887770 sc-eQTL 7.41e-01 -0.0654 0.198 0.949 CD8_TCM L2
ENSG00000110921 MVK -983666 sc-eQTL 5.17e-02 0.409 0.209 0.949 CD8_TCM L2
ENSG00000135093 USP30 -433500 sc-eQTL 7.17e-01 -0.0739 0.204 0.949 CD8_TCM L2
ENSG00000136003 ISCU 27007 sc-eQTL 2.36e-02 -0.442 0.194 0.949 CD8_TCM L2
ENSG00000136045 PWP1 903790 sc-eQTL 5.26e-01 -0.131 0.207 0.949 CD8_TCM L2
ENSG00000139428 MMAB -983991 sc-eQTL 2.62e-01 -0.222 0.197 0.949 CD8_TCM L2
ENSG00000151148 UBE3B -887813 sc-eQTL 8.26e-01 -0.0473 0.215 0.949 CD8_TCM L2
ENSG00000174600 CMKLR1 250272 sc-eQTL 7.34e-02 -0.123 0.0686 0.949 CD8_TCM L2
ENSG00000189046 ALKBH2 -504042 sc-eQTL 1.42e-01 0.299 0.203 0.949 CD8_TCM L2
ENSG00000198855 FICD 74312 sc-eQTL 2.91e-01 -0.206 0.195 0.949 CD8_TCM L2
ENSG00000256262 USP30-AS1 -464363 sc-eQTL 5.43e-01 -0.117 0.192 0.949 CD8_TCM L2
ENSG00000075856 SART3 28189 sc-eQTL 2.99e-01 -0.26 0.249 0.948 PB L2
ENSG00000076248 UNG -507985 sc-eQTL 2.70e-01 -0.249 0.225 0.948 PB L2
ENSG00000076555 ACACB -527006 sc-eQTL 6.85e-02 0.38 0.207 0.948 PB L2
ENSG00000084112 SSH1 -268001 sc-eQTL 3.70e-01 0.209 0.232 0.948 PB L2
ENSG00000110851 PRDM4 828317 sc-eQTL 5.79e-01 -0.0975 0.175 0.948 PB L2
ENSG00000110876 SELPLG -44370 sc-eQTL 7.18e-01 0.0554 0.153 0.948 PB L2
ENSG00000110880 CORO1C -142007 sc-eQTL 1.04e-01 0.37 0.226 0.948 PB L2
ENSG00000110906 KCTD10 -887770 sc-eQTL 5.23e-01 0.157 0.244 0.948 PB L2
ENSG00000110921 MVK -983666 sc-eQTL 7.83e-01 -0.0635 0.229 0.948 PB L2
ENSG00000135093 USP30 -433500 sc-eQTL 6.74e-01 -0.0956 0.227 0.948 PB L2
ENSG00000136003 ISCU 27007 sc-eQTL 1.42e-01 -0.253 0.171 0.948 PB L2
ENSG00000136045 PWP1 903790 sc-eQTL 4.87e-01 -0.146 0.209 0.948 PB L2
ENSG00000139428 MMAB -983991 sc-eQTL 6.01e-01 0.116 0.221 0.948 PB L2
ENSG00000151148 UBE3B -887813 sc-eQTL 7.12e-01 0.0861 0.233 0.948 PB L2
ENSG00000189046 ALKBH2 -504042 sc-eQTL 1.68e-01 0.328 0.236 0.948 PB L2
ENSG00000198855 FICD 74312 sc-eQTL 4.48e-01 0.13 0.171 0.948 PB L2
ENSG00000256262 USP30-AS1 -464363 sc-eQTL 4.55e-01 -0.166 0.221 0.948 PB L2
ENSG00000257221 AC007569.1 -39079 sc-eQTL 7.01e-01 0.0799 0.208 0.948 PB L2
ENSG00000075856 SART3 28189 sc-eQTL 4.96e-01 0.133 0.196 0.95 Pro_T L2
ENSG00000076248 UNG -507985 sc-eQTL 6.06e-01 -0.0753 0.146 0.95 Pro_T L2
ENSG00000076555 ACACB -527006 sc-eQTL 5.40e-02 0.341 0.176 0.95 Pro_T L2
ENSG00000084112 SSH1 -268001 sc-eQTL 7.43e-01 -0.0596 0.182 0.95 Pro_T L2
ENSG00000110851 PRDM4 828317 sc-eQTL 6.09e-01 0.104 0.204 0.95 Pro_T L2
ENSG00000110876 SELPLG -44370 sc-eQTL 4.20e-01 0.109 0.135 0.95 Pro_T L2
ENSG00000110880 CORO1C -142007 sc-eQTL 3.90e-01 0.118 0.137 0.95 Pro_T L2
ENSG00000110906 KCTD10 -887770 sc-eQTL 5.35e-01 0.119 0.191 0.95 Pro_T L2
ENSG00000110921 MVK -983666 sc-eQTL 7.20e-01 0.0679 0.189 0.95 Pro_T L2
ENSG00000135093 USP30 -433500 sc-eQTL 6.73e-02 -0.354 0.192 0.95 Pro_T L2
ENSG00000136003 ISCU 27007 sc-eQTL 3.98e-01 -0.123 0.145 0.95 Pro_T L2
ENSG00000136045 PWP1 903790 sc-eQTL 1.27e-01 0.242 0.158 0.95 Pro_T L2
ENSG00000139428 MMAB -983991 sc-eQTL 6.57e-01 -0.0822 0.185 0.95 Pro_T L2
ENSG00000151148 UBE3B -887813 sc-eQTL 1.56e-01 0.286 0.201 0.95 Pro_T L2
ENSG00000174600 CMKLR1 250272 sc-eQTL 4.19e-01 -0.118 0.146 0.95 Pro_T L2
ENSG00000189046 ALKBH2 -504042 sc-eQTL 4.54e-01 -0.137 0.182 0.95 Pro_T L2
ENSG00000198855 FICD 74312 sc-eQTL 4.00e-01 0.147 0.175 0.95 Pro_T L2
ENSG00000256262 USP30-AS1 -464363 sc-eQTL 9.94e-01 0.00138 0.178 0.95 Pro_T L2
ENSG00000257221 AC007569.1 -39079 sc-eQTL 5.86e-01 0.0483 0.0885 0.95 Pro_T L2
ENSG00000075856 SART3 28189 sc-eQTL 1.99e-02 0.553 0.235 0.948 gdT L2
ENSG00000076248 UNG -507985 sc-eQTL 7.66e-01 -0.0652 0.219 0.948 gdT L2
ENSG00000076555 ACACB -527006 sc-eQTL 9.98e-02 -0.363 0.219 0.948 gdT L2
ENSG00000084112 SSH1 -268001 sc-eQTL 5.17e-01 0.139 0.214 0.948 gdT L2
ENSG00000110851 PRDM4 828317 sc-eQTL 6.55e-01 0.106 0.237 0.948 gdT L2
ENSG00000110876 SELPLG -44370 sc-eQTL 6.18e-02 -0.245 0.13 0.948 gdT L2
ENSG00000110880 CORO1C -142007 sc-eQTL 2.45e-01 0.221 0.189 0.948 gdT L2
ENSG00000110906 KCTD10 -887770 sc-eQTL 8.77e-01 -0.037 0.238 0.948 gdT L2
ENSG00000110921 MVK -983666 sc-eQTL 9.18e-01 0.0212 0.206 0.948 gdT L2
ENSG00000135093 USP30 -433500 sc-eQTL 6.80e-01 0.0934 0.226 0.948 gdT L2
ENSG00000136003 ISCU 27007 sc-eQTL 4.49e-01 -0.164 0.216 0.948 gdT L2
ENSG00000136045 PWP1 903790 sc-eQTL 7.79e-01 0.0692 0.246 0.948 gdT L2
ENSG00000139428 MMAB -983991 sc-eQTL 8.46e-01 0.0451 0.232 0.948 gdT L2
ENSG00000151148 UBE3B -887813 sc-eQTL 8.74e-01 0.0363 0.229 0.948 gdT L2
ENSG00000174600 CMKLR1 250272 sc-eQTL 3.08e-01 -0.153 0.15 0.948 gdT L2
ENSG00000189046 ALKBH2 -504042 sc-eQTL 7.29e-01 -0.0833 0.24 0.948 gdT L2
ENSG00000198855 FICD 74312 sc-eQTL 1.47e-01 -0.314 0.216 0.948 gdT L2
ENSG00000256262 USP30-AS1 -464363 sc-eQTL 7.43e-02 -0.39 0.217 0.948 gdT L2
ENSG00000257221 AC007569.1 -39079 sc-eQTL 2.29e-01 -0.208 0.172 0.948 gdT L2
ENSG00000075856 SART3 28189 sc-eQTL 4.85e-01 0.14 0.2 0.949 intMono L2
ENSG00000076555 ACACB -527006 sc-eQTL 9.57e-01 0.00967 0.179 0.949 intMono L2
ENSG00000084112 SSH1 -268001 sc-eQTL 9.04e-01 0.0221 0.183 0.949 intMono L2
ENSG00000110851 PRDM4 828317 sc-eQTL 2.80e-01 -0.211 0.195 0.949 intMono L2
ENSG00000110876 SELPLG -44370 sc-eQTL 1.04e-01 0.229 0.14 0.949 intMono L2
ENSG00000110880 CORO1C -142007 sc-eQTL 2.20e-01 -0.193 0.157 0.949 intMono L2
ENSG00000110906 KCTD10 -887770 sc-eQTL 6.85e-03 -0.532 0.195 0.949 intMono L2
ENSG00000110921 MVK -983666 sc-eQTL 7.40e-03 0.502 0.185 0.949 intMono L2
ENSG00000135093 USP30 -433500 sc-eQTL 1.10e-01 0.299 0.186 0.949 intMono L2
ENSG00000136003 ISCU 27007 sc-eQTL 1.44e-01 -0.289 0.197 0.949 intMono L2
ENSG00000136045 PWP1 903790 sc-eQTL 3.26e-01 0.194 0.197 0.949 intMono L2
ENSG00000139428 MMAB -983991 sc-eQTL 2.42e-01 -0.232 0.198 0.949 intMono L2
ENSG00000151148 UBE3B -887813 sc-eQTL 2.76e-01 0.205 0.188 0.949 intMono L2
ENSG00000174600 CMKLR1 250272 sc-eQTL 2.55e-01 -0.192 0.168 0.949 intMono L2
ENSG00000189046 ALKBH2 -504042 sc-eQTL 3.77e-01 0.173 0.196 0.949 intMono L2
ENSG00000198855 FICD 74312 sc-eQTL 6.30e-01 0.0909 0.188 0.949 intMono L2
ENSG00000256262 USP30-AS1 -464363 sc-eQTL 8.58e-01 0.0303 0.169 0.949 intMono L2
ENSG00000075856 SART3 28189 sc-eQTL 7.50e-01 0.0595 0.186 0.948 ncMono L2
ENSG00000076555 ACACB -527006 sc-eQTL 8.82e-01 -0.0264 0.177 0.948 ncMono L2
ENSG00000084112 SSH1 -268001 sc-eQTL 9.95e-01 0.00114 0.169 0.948 ncMono L2
ENSG00000110851 PRDM4 828317 sc-eQTL 6.27e-01 -0.081 0.167 0.948 ncMono L2
ENSG00000110876 SELPLG -44370 sc-eQTL 6.74e-01 -0.0429 0.102 0.948 ncMono L2
ENSG00000110880 CORO1C -142007 sc-eQTL 6.74e-01 -0.0792 0.188 0.948 ncMono L2
ENSG00000110906 KCTD10 -887770 sc-eQTL 9.50e-01 -0.0122 0.196 0.948 ncMono L2
ENSG00000110921 MVK -983666 sc-eQTL 6.30e-01 0.091 0.189 0.948 ncMono L2
ENSG00000135093 USP30 -433500 sc-eQTL 8.75e-01 -0.0317 0.202 0.948 ncMono L2
ENSG00000136003 ISCU 27007 sc-eQTL 3.71e-02 -0.363 0.173 0.948 ncMono L2
ENSG00000136045 PWP1 903790 sc-eQTL 6.26e-01 0.0872 0.179 0.948 ncMono L2
ENSG00000139428 MMAB -983991 sc-eQTL 7.33e-01 0.0663 0.194 0.948 ncMono L2
ENSG00000151148 UBE3B -887813 sc-eQTL 6.95e-01 0.0774 0.197 0.948 ncMono L2
ENSG00000174600 CMKLR1 250272 sc-eQTL 9.62e-01 -0.00798 0.169 0.948 ncMono L2
ENSG00000189046 ALKBH2 -504042 sc-eQTL 4.95e-01 0.135 0.197 0.948 ncMono L2
ENSG00000198855 FICD 74312 sc-eQTL 6.69e-01 0.0778 0.182 0.948 ncMono L2
ENSG00000256262 USP30-AS1 -464363 sc-eQTL 5.68e-01 0.104 0.182 0.948 ncMono L2
ENSG00000075856 SART3 28189 sc-eQTL 6.23e-01 -0.103 0.21 0.949 pDC L2
ENSG00000076248 UNG -507985 sc-eQTL 7.15e-01 0.0716 0.196 0.949 pDC L2
ENSG00000076555 ACACB -527006 sc-eQTL 1.10e-01 0.321 0.2 0.949 pDC L2
ENSG00000084112 SSH1 -268001 sc-eQTL 6.83e-01 0.0868 0.212 0.949 pDC L2
ENSG00000110851 PRDM4 828317 sc-eQTL 5.08e-01 0.156 0.235 0.949 pDC L2
ENSG00000110876 SELPLG -44370 sc-eQTL 3.54e-01 -0.13 0.14 0.949 pDC L2
ENSG00000110880 CORO1C -142007 sc-eQTL 3.63e-01 0.14 0.154 0.949 pDC L2
ENSG00000110906 KCTD10 -887770 sc-eQTL 3.03e-01 -0.244 0.236 0.949 pDC L2
ENSG00000110921 MVK -983666 sc-eQTL 1.95e-01 0.256 0.197 0.949 pDC L2
ENSG00000135093 USP30 -433500 sc-eQTL 1.16e-02 0.519 0.203 0.949 pDC L2
ENSG00000136003 ISCU 27007 sc-eQTL 3.99e-01 -0.148 0.175 0.949 pDC L2
ENSG00000136045 PWP1 903790 sc-eQTL 1.01e-02 0.529 0.203 0.949 pDC L2
ENSG00000139428 MMAB -983991 sc-eQTL 1.26e-01 0.317 0.206 0.949 pDC L2
ENSG00000151148 UBE3B -887813 sc-eQTL 5.21e-01 -0.144 0.224 0.949 pDC L2
ENSG00000174600 CMKLR1 250272 sc-eQTL 1.63e-01 0.2 0.143 0.949 pDC L2
ENSG00000189046 ALKBH2 -504042 sc-eQTL 2.73e-02 -0.443 0.199 0.949 pDC L2
ENSG00000198855 FICD 74312 sc-eQTL 7.86e-01 0.0548 0.202 0.949 pDC L2
ENSG00000256262 USP30-AS1 -464363 sc-eQTL 9.43e-01 -0.0134 0.187 0.949 pDC L2
ENSG00000257221 AC007569.1 -39079 sc-eQTL 3.10e-01 0.199 0.196 0.949 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000075856 SART3 28189 eQTL 3.35e-18 -0.353 0.0397 0.0 0.0 0.0491
ENSG00000136003 ISCU 26988 eQTL 3.53e-115 -1.09 0.0413 0.0 0.0 0.0491
ENSG00000183160 TMEM119 -8731 eQTL 0.00166 0.111 0.0351 0.0 0.0 0.0491
ENSG00000189046 ALKBH2 -503899 eQTL 0.0275 -0.135 0.0613 0.0 0.0 0.0491

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000075856 SART3 28189 2.43e-05 1.81e-05 1.56e-06 9.17e-06 2.38e-06 9.84e-06 2.17e-05 2.19e-06 1.5e-05 6.62e-06 1.87e-05 6.62e-06 3.18e-05 5.28e-06 3.8e-06 8.18e-06 8.19e-06 1.26e-05 3.78e-06 2.95e-06 6.76e-06 1.28e-05 1.37e-05 3.73e-06 2.41e-05 4.43e-06 7.19e-06 5.65e-06 1.46e-05 1.43e-05 9.73e-06 1.08e-06 1.3e-06 3.55e-06 5.76e-06 2.85e-06 1.79e-06 1.94e-06 2.05e-06 1.56e-06 1.02e-06 2.05e-05 2.69e-06 1.61e-07 7.9e-07 1.81e-06 1.47e-06 7.44e-07 5.26e-07
ENSG00000136003 ISCU 26988 2.47e-05 1.86e-05 1.68e-06 9.4e-06 2.35e-06 1.01e-05 2.2e-05 2.14e-06 1.54e-05 6.78e-06 1.91e-05 6.61e-06 3.22e-05 5.48e-06 3.95e-06 8.42e-06 8.33e-06 1.31e-05 3.87e-06 3.05e-06 6.88e-06 1.26e-05 1.39e-05 3.78e-06 2.42e-05 4.4e-06 7.34e-06 5.86e-06 1.48e-05 1.46e-05 1.01e-05 9.98e-07 1.24e-06 3.6e-06 5.87e-06 2.84e-06 1.77e-06 1.93e-06 1.96e-06 1.69e-06 1.02e-06 2.07e-05 2.68e-06 1.59e-07 7.57e-07 1.73e-06 1.6e-06 7.51e-07 5.08e-07
ENSG00000183160 TMEM119 -8731 3.63e-05 2.85e-05 4.42e-06 1.39e-05 4.08e-06 1.42e-05 3.74e-05 3.67e-06 2.47e-05 1.27e-05 3.16e-05 1.2e-05 4.29e-05 1.12e-05 6.04e-06 1.51e-05 1.44e-05 2.23e-05 7.21e-06 5.3e-06 1.24e-05 2.57e-05 2.63e-05 7.57e-06 3.73e-05 6.16e-06 1.13e-05 1.07e-05 2.61e-05 2.23e-05 1.65e-05 1.65e-06 2.25e-06 6.16e-06 9.6e-06 4.67e-06 2.56e-06 2.89e-06 3.63e-06 3.01e-06 1.63e-06 3.36e-05 3.34e-06 2.66e-07 2.08e-06 3.1e-06 3.64e-06 1.43e-06 1.3e-06