Genes within 1Mb (chr12:108585459:G:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000075856 SART3 24059 eQTL 1.47e-18 0.164 0.0183 0.0 0.0 0.36
ENSG00000110851 PRDM4 824187 eQTL 1.49e-02 0.0585 0.024 0.0 0.0 0.36
ENSG00000110876 SELPLG -48500 pQTL 2.57e-02 0.0618 0.0277 0.00143 0.0 0.363
ENSG00000110876 SELPLG -48500 eQTL 3.32e-06 -0.0423 0.00903 0.0 0.0 0.36
ENSG00000110880 CORO1C -146137 eQTL 3.30e-04 -0.0623 0.0173 0.0 0.0 0.36
ENSG00000135093 USP30 -437630 eQTL 3.67e-02 0.038 0.0182 0.0 0.0 0.36
ENSG00000136003 ISCU 22858 eQTL 2.18e-13 -0.181 0.0244 0.0 0.0 0.36
ENSG00000183160 TMEM119 -12861 eQTL 6.62e-06 0.0729 0.0161 0.0 0.0 0.36
ENSG00000189046 ALKBH2 -508029 eQTL 1.45e-03 -0.09 0.0282 0.00297 0.00229 0.36
ENSG00000257221 AC007569.1 -43228 eQTL 2.61e-04 0.112 0.0306 0.0 0.0 0.36
ENSG00000258136 AC007622.2 848904 eQTL 3.84e-02 0.0766 0.0369 0.0 0.0 0.36
ENSG00000274598 AC087893.1 -248925 eQTL 4.91e-02 0.0517 0.0263 0.0 0.0 0.36


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000075856 SART3 24059 4.56e-05 3.14e-05 5.55e-06 1.39e-05 4.62e-06 1.54e-05 3.78e-05 3.96e-06 2.89e-05 1.6e-05 3.22e-05 1.23e-05 3.98e-05 1.17e-05 5.68e-06 2.14e-05 1.4e-05 2.33e-05 7.49e-06 5.45e-06 1.34e-05 3.53e-05 3.36e-05 7.92e-06 4.01e-05 7.68e-06 1.19e-05 1.28e-05 3.23e-05 2.02e-05 1.78e-05 1.54e-06 1.9e-06 5.89e-06 1.15e-05 5.23e-06 2.37e-06 2.96e-06 3.92e-06 2.44e-06 1.52e-06 4.24e-05 2.83e-06 2.62e-07 2.63e-06 4.34e-06 4.38e-06 1.3e-06 1.5e-06
ENSG00000110876 SELPLG -48500 1.65e-05 1.45e-05 2.53e-06 9.42e-06 2.38e-06 7.78e-06 1.88e-05 2.13e-06 1.44e-05 8.28e-06 1.71e-05 6.05e-06 2.26e-05 4.95e-06 3.96e-06 9.23e-06 6.8e-06 1.18e-05 3.63e-06 2.95e-06 7.27e-06 1.39e-05 1.87e-05 4.48e-06 2.29e-05 5.01e-06 7.15e-06 6.54e-06 1.73e-05 1e-05 1.03e-05 9.57e-07 1.09e-06 3.63e-06 6.94e-06 3.17e-06 1.77e-06 2.3e-06 2.11e-06 1e-06 9.82e-07 2.6e-05 1.38e-06 1.58e-07 1.29e-06 2.79e-06 2.62e-06 6.9e-07 1.24e-06
ENSG00000110880 CORO1C -146137 1.92e-06 1.4e-06 2.59e-07 1.35e-06 1.18e-07 7.71e-07 1.31e-06 3.28e-07 1.74e-06 7.54e-07 2.06e-06 6.62e-07 2.58e-06 2.83e-07 5.31e-07 1.04e-06 9.64e-07 1.09e-06 6.56e-07 4.38e-07 8.29e-07 1.91e-06 2.58e-06 6.29e-07 2.41e-06 9.37e-07 9.62e-07 8.53e-07 1.69e-06 1.32e-06 8.17e-07 3.86e-08 4.77e-08 5.94e-07 5.3e-07 5.35e-07 7.25e-07 1.69e-07 2.9e-07 2.44e-07 4.45e-08 2.43e-06 5.07e-08 3.4e-08 1.73e-07 1.22e-07 2.14e-07 1.22e-08 2.13e-07
ENSG00000136003 ISCU 22858 4.67e-05 3.29e-05 5.66e-06 1.42e-05 4.91e-06 1.6e-05 3.93e-05 4.24e-06 3.01e-05 1.63e-05 3.34e-05 1.33e-05 4.12e-05 1.23e-05 5.8e-06 2.23e-05 1.47e-05 2.39e-05 7.5e-06 5.66e-06 1.38e-05 3.72e-05 3.46e-05 8.13e-06 4.15e-05 7.94e-06 1.27e-05 1.3e-05 3.36e-05 2.09e-05 1.87e-05 1.58e-06 1.92e-06 6.04e-06 1.19e-05 5.34e-06 2.48e-06 2.96e-06 4.1e-06 2.62e-06 1.59e-06 4.33e-05 2.88e-06 2.62e-07 2.66e-06 4.43e-06 4.52e-06 1.36e-06 1.53e-06
ENSG00000183160 TMEM119 -12861 6.05e-05 4.36e-05 6.79e-06 1.7e-05 6.92e-06 1.86e-05 5.32e-05 6.03e-06 4.13e-05 1.89e-05 4.65e-05 2.12e-05 5.78e-05 1.71e-05 7.4e-06 2.88e-05 2.22e-05 3.08e-05 9.6e-06 7.61e-06 1.86e-05 4.86e-05 4.11e-05 1.05e-05 5.46e-05 1.02e-05 1.85e-05 1.6e-05 3.97e-05 2.9e-05 2.53e-05 1.63e-06 3.06e-06 7.48e-06 1.34e-05 6.64e-06 3.26e-06 3.27e-06 5.18e-06 3.61e-06 1.74e-06 4.87e-05 4.84e-06 3.59e-07 2.93e-06 4.85e-06 4.82e-06 1.69e-06 1.45e-06
ENSG00000257221 AC007569.1 -43228 2.13e-05 1.69e-05 2.91e-06 1.06e-05 2.27e-06 9.27e-06 2.14e-05 2.46e-06 1.67e-05 9.53e-06 1.92e-05 6.72e-06 2.55e-05 5.92e-06 4.41e-06 1.03e-05 8.1e-06 1.35e-05 4.25e-06 3.25e-06 8.21e-06 1.73e-05 2.19e-05 4.94e-06 2.58e-05 5.37e-06 7.6e-06 7.8e-06 2.01e-05 1.18e-05 1.16e-05 1.2e-06 1.23e-06 3.89e-06 8.09e-06 3.77e-06 1.77e-06 2.48e-06 2.2e-06 1.04e-06 1.01e-06 3e-05 1.6e-06 1.9e-07 1.85e-06 2.75e-06 3.25e-06 7.04e-07 1.32e-06