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Genes within 1Mb (chr12:108577437:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075856 SART3 16037 sc-eQTL 1.74e-01 -0.302 0.222 0.949 B_Activated L2
ENSG00000076248 UNG -520137 sc-eQTL 3.72e-01 -0.175 0.195 0.949 B_Activated L2
ENSG00000076555 ACACB -539158 sc-eQTL 5.40e-01 0.108 0.175 0.949 B_Activated L2
ENSG00000084112 SSH1 -280153 sc-eQTL 7.25e-01 -0.0707 0.201 0.949 B_Activated L2
ENSG00000110851 PRDM4 816165 sc-eQTL 4.28e-01 -0.143 0.18 0.949 B_Activated L2
ENSG00000110876 SELPLG -56522 sc-eQTL 9.58e-01 -0.00982 0.186 0.949 B_Activated L2
ENSG00000110880 CORO1C -154159 sc-eQTL 5.27e-01 0.139 0.219 0.949 B_Activated L2
ENSG00000110906 KCTD10 -899922 sc-eQTL 5.39e-01 -0.127 0.206 0.949 B_Activated L2
ENSG00000110921 MVK -995818 sc-eQTL 2.78e-01 -0.211 0.194 0.949 B_Activated L2
ENSG00000135093 USP30 -445652 sc-eQTL 9.73e-01 -0.00655 0.193 0.949 B_Activated L2
ENSG00000136003 ISCU 14855 sc-eQTL 1.13e-03 -0.654 0.197 0.949 B_Activated L2
ENSG00000136045 PWP1 891638 sc-eQTL 3.50e-01 0.194 0.206 0.949 B_Activated L2
ENSG00000139428 MMAB -996143 sc-eQTL 6.41e-02 -0.374 0.201 0.949 B_Activated L2
ENSG00000151148 UBE3B -899965 sc-eQTL 9.04e-01 -0.0262 0.218 0.949 B_Activated L2
ENSG00000189046 ALKBH2 -516194 sc-eQTL 5.11e-01 0.136 0.207 0.949 B_Activated L2
ENSG00000198855 FICD 62160 sc-eQTL 8.41e-01 0.0373 0.185 0.949 B_Activated L2
ENSG00000256262 USP30-AS1 -476515 sc-eQTL 5.46e-01 -0.118 0.195 0.949 B_Activated L2
ENSG00000257221 AC007569.1 -51231 sc-eQTL 6.77e-01 -0.0932 0.223 0.949 B_Activated L2
ENSG00000075856 SART3 16037 sc-eQTL 1.53e-01 -0.312 0.217 0.948 CD4_CTL L2
ENSG00000076248 UNG -520137 sc-eQTL 9.55e-01 -0.0111 0.196 0.948 CD4_CTL L2
ENSG00000076555 ACACB -539158 sc-eQTL 2.56e-01 -0.211 0.185 0.948 CD4_CTL L2
ENSG00000084112 SSH1 -280153 sc-eQTL 1.61e-01 0.279 0.199 0.948 CD4_CTL L2
ENSG00000110851 PRDM4 816165 sc-eQTL 3.38e-01 0.198 0.206 0.948 CD4_CTL L2
ENSG00000110876 SELPLG -56522 sc-eQTL 9.10e-01 0.016 0.141 0.948 CD4_CTL L2
ENSG00000110906 KCTD10 -899922 sc-eQTL 8.61e-01 -0.0383 0.218 0.948 CD4_CTL L2
ENSG00000110921 MVK -995818 sc-eQTL 2.21e-01 -0.244 0.198 0.948 CD4_CTL L2
ENSG00000135093 USP30 -445652 sc-eQTL 8.51e-01 0.0377 0.2 0.948 CD4_CTL L2
ENSG00000136003 ISCU 14855 sc-eQTL 1.44e-02 -0.445 0.18 0.948 CD4_CTL L2
ENSG00000136045 PWP1 891638 sc-eQTL 5.39e-01 0.127 0.207 0.948 CD4_CTL L2
ENSG00000139428 MMAB -996143 sc-eQTL 8.24e-02 0.366 0.209 0.948 CD4_CTL L2
ENSG00000151148 UBE3B -899965 sc-eQTL 1.33e-01 -0.325 0.215 0.948 CD4_CTL L2
ENSG00000189046 ALKBH2 -516194 sc-eQTL 4.99e-01 -0.14 0.207 0.948 CD4_CTL L2
ENSG00000198855 FICD 62160 sc-eQTL 7.07e-01 -0.0707 0.188 0.948 CD4_CTL L2
ENSG00000256139 AC007637.1 -533781 sc-eQTL 7.74e-02 0.278 0.157 0.948 CD4_CTL L2
ENSG00000256262 USP30-AS1 -476515 sc-eQTL 6.85e-01 -0.0845 0.208 0.948 CD4_CTL L2
ENSG00000075856 SART3 16037 sc-eQTL 7.91e-01 0.0588 0.221 0.949 CD8_TCM L2
ENSG00000076248 UNG -520137 sc-eQTL 3.53e-01 0.18 0.194 0.949 CD8_TCM L2
ENSG00000076555 ACACB -539158 sc-eQTL 7.19e-01 -0.0725 0.201 0.949 CD8_TCM L2
ENSG00000084112 SSH1 -280153 sc-eQTL 9.51e-01 -0.0128 0.209 0.949 CD8_TCM L2
ENSG00000110851 PRDM4 816165 sc-eQTL 8.05e-01 0.048 0.194 0.949 CD8_TCM L2
ENSG00000110876 SELPLG -56522 sc-eQTL 9.20e-01 -0.0126 0.125 0.949 CD8_TCM L2
ENSG00000110880 CORO1C -154159 sc-eQTL 3.06e-01 0.19 0.185 0.949 CD8_TCM L2
ENSG00000110906 KCTD10 -899922 sc-eQTL 6.60e-01 -0.0882 0.2 0.949 CD8_TCM L2
ENSG00000110921 MVK -995818 sc-eQTL 8.63e-02 0.365 0.212 0.949 CD8_TCM L2
ENSG00000135093 USP30 -445652 sc-eQTL 8.06e-01 0.0508 0.206 0.949 CD8_TCM L2
ENSG00000136003 ISCU 14855 sc-eQTL 2.18e-03 -0.602 0.194 0.949 CD8_TCM L2
ENSG00000136045 PWP1 891638 sc-eQTL 3.23e-01 -0.207 0.209 0.949 CD8_TCM L2
ENSG00000139428 MMAB -996143 sc-eQTL 2.50e-01 -0.23 0.199 0.949 CD8_TCM L2
ENSG00000151148 UBE3B -899965 sc-eQTL 8.99e-01 -0.0276 0.218 0.949 CD8_TCM L2
ENSG00000174600 CMKLR1 238120 sc-eQTL 7.80e-01 0.0196 0.07 0.949 CD8_TCM L2
ENSG00000189046 ALKBH2 -516194 sc-eQTL 2.59e-01 0.233 0.206 0.949 CD8_TCM L2
ENSG00000198855 FICD 62160 sc-eQTL 3.43e-01 -0.188 0.197 0.949 CD8_TCM L2
ENSG00000256262 USP30-AS1 -476515 sc-eQTL 4.88e-01 -0.135 0.195 0.949 CD8_TCM L2
ENSG00000075856 SART3 16037 sc-eQTL 2.43e-01 -0.284 0.242 0.944 PB L2
ENSG00000076248 UNG -520137 sc-eQTL 2.21e-01 -0.269 0.218 0.944 PB L2
ENSG00000076555 ACACB -539158 sc-eQTL 9.93e-02 0.335 0.202 0.944 PB L2
ENSG00000084112 SSH1 -280153 sc-eQTL 3.26e-01 0.223 0.226 0.944 PB L2
ENSG00000110851 PRDM4 816165 sc-eQTL 6.01e-01 -0.0894 0.171 0.944 PB L2
ENSG00000110876 SELPLG -56522 sc-eQTL 5.46e-01 0.09 0.149 0.944 PB L2
ENSG00000110880 CORO1C -154159 sc-eQTL 9.99e-02 0.365 0.22 0.944 PB L2
ENSG00000110906 KCTD10 -899922 sc-eQTL 6.06e-01 0.123 0.238 0.944 PB L2
ENSG00000110921 MVK -995818 sc-eQTL 8.06e-01 -0.0548 0.223 0.944 PB L2
ENSG00000135093 USP30 -445652 sc-eQTL 7.37e-01 -0.0744 0.221 0.944 PB L2
ENSG00000136003 ISCU 14855 sc-eQTL 2.50e-01 -0.193 0.167 0.944 PB L2
ENSG00000136045 PWP1 891638 sc-eQTL 5.47e-01 -0.123 0.204 0.944 PB L2
ENSG00000139428 MMAB -996143 sc-eQTL 8.20e-01 0.0489 0.215 0.944 PB L2
ENSG00000151148 UBE3B -899965 sc-eQTL 5.71e-01 0.129 0.226 0.944 PB L2
ENSG00000189046 ALKBH2 -516194 sc-eQTL 2.17e-01 0.286 0.23 0.944 PB L2
ENSG00000198855 FICD 62160 sc-eQTL 9.64e-01 0.00753 0.167 0.944 PB L2
ENSG00000256262 USP30-AS1 -476515 sc-eQTL 6.22e-01 -0.107 0.215 0.944 PB L2
ENSG00000257221 AC007569.1 -51231 sc-eQTL 7.97e-01 0.0521 0.202 0.944 PB L2
ENSG00000075856 SART3 16037 sc-eQTL 5.27e-01 0.125 0.197 0.95 Pro_T L2
ENSG00000076248 UNG -520137 sc-eQTL 5.68e-01 -0.0837 0.146 0.95 Pro_T L2
ENSG00000076555 ACACB -539158 sc-eQTL 4.94e-02 0.348 0.176 0.95 Pro_T L2
ENSG00000084112 SSH1 -280153 sc-eQTL 9.00e-01 -0.0229 0.182 0.95 Pro_T L2
ENSG00000110851 PRDM4 816165 sc-eQTL 7.17e-01 0.0744 0.205 0.95 Pro_T L2
ENSG00000110876 SELPLG -56522 sc-eQTL 4.98e-01 0.092 0.135 0.95 Pro_T L2
ENSG00000110880 CORO1C -154159 sc-eQTL 4.27e-01 0.11 0.138 0.95 Pro_T L2
ENSG00000110906 KCTD10 -899922 sc-eQTL 3.70e-01 0.172 0.192 0.95 Pro_T L2
ENSG00000110921 MVK -995818 sc-eQTL 8.62e-01 0.033 0.19 0.95 Pro_T L2
ENSG00000135093 USP30 -445652 sc-eQTL 1.13e-01 -0.307 0.193 0.95 Pro_T L2
ENSG00000136003 ISCU 14855 sc-eQTL 2.72e-01 -0.16 0.145 0.95 Pro_T L2
ENSG00000136045 PWP1 891638 sc-eQTL 1.05e-01 0.258 0.158 0.95 Pro_T L2
ENSG00000139428 MMAB -996143 sc-eQTL 6.78e-01 -0.0771 0.186 0.95 Pro_T L2
ENSG00000151148 UBE3B -899965 sc-eQTL 2.43e-01 0.237 0.202 0.95 Pro_T L2
ENSG00000174600 CMKLR1 238120 sc-eQTL 8.24e-01 -0.0328 0.147 0.95 Pro_T L2
ENSG00000189046 ALKBH2 -516194 sc-eQTL 4.54e-01 -0.137 0.183 0.95 Pro_T L2
ENSG00000198855 FICD 62160 sc-eQTL 4.32e-01 0.138 0.175 0.95 Pro_T L2
ENSG00000256262 USP30-AS1 -476515 sc-eQTL 9.31e-01 0.0155 0.178 0.95 Pro_T L2
ENSG00000257221 AC007569.1 -51231 sc-eQTL 7.32e-01 0.0304 0.0888 0.95 Pro_T L2
ENSG00000075856 SART3 16037 sc-eQTL 5.07e-01 0.133 0.2 0.949 intMono L2
ENSG00000076555 ACACB -539158 sc-eQTL 7.97e-01 0.0463 0.179 0.949 intMono L2
ENSG00000084112 SSH1 -280153 sc-eQTL 9.04e-01 0.0221 0.183 0.949 intMono L2
ENSG00000110851 PRDM4 816165 sc-eQTL 2.47e-01 -0.227 0.196 0.949 intMono L2
ENSG00000110876 SELPLG -56522 sc-eQTL 8.44e-02 0.243 0.14 0.949 intMono L2
ENSG00000110880 CORO1C -154159 sc-eQTL 1.77e-01 -0.212 0.157 0.949 intMono L2
ENSG00000110906 KCTD10 -899922 sc-eQTL 8.44e-03 -0.52 0.195 0.949 intMono L2
ENSG00000110921 MVK -995818 sc-eQTL 1.15e-02 0.475 0.186 0.949 intMono L2
ENSG00000135093 USP30 -445652 sc-eQTL 2.66e-01 0.209 0.187 0.949 intMono L2
ENSG00000136003 ISCU 14855 sc-eQTL 4.28e-02 -0.401 0.197 0.949 intMono L2
ENSG00000136045 PWP1 891638 sc-eQTL 3.81e-01 0.173 0.198 0.949 intMono L2
ENSG00000139428 MMAB -996143 sc-eQTL 3.49e-01 -0.186 0.198 0.949 intMono L2
ENSG00000151148 UBE3B -899965 sc-eQTL 6.39e-01 0.0889 0.189 0.949 intMono L2
ENSG00000174600 CMKLR1 238120 sc-eQTL 5.17e-01 -0.11 0.169 0.949 intMono L2
ENSG00000189046 ALKBH2 -516194 sc-eQTL 3.76e-01 0.174 0.196 0.949 intMono L2
ENSG00000198855 FICD 62160 sc-eQTL 5.62e-01 0.109 0.188 0.949 intMono L2
ENSG00000256262 USP30-AS1 -476515 sc-eQTL 8.19e-01 0.0387 0.169 0.949 intMono L2
ENSG00000075856 SART3 16037 sc-eQTL 7.59e-01 0.0576 0.187 0.948 ncMono L2
ENSG00000076555 ACACB -539158 sc-eQTL 8.60e-01 0.0314 0.177 0.948 ncMono L2
ENSG00000084112 SSH1 -280153 sc-eQTL 8.42e-01 0.0338 0.169 0.948 ncMono L2
ENSG00000110851 PRDM4 816165 sc-eQTL 7.14e-01 -0.0613 0.167 0.948 ncMono L2
ENSG00000110876 SELPLG -56522 sc-eQTL 7.26e-01 -0.0359 0.102 0.948 ncMono L2
ENSG00000110880 CORO1C -154159 sc-eQTL 5.82e-01 -0.104 0.188 0.948 ncMono L2
ENSG00000110906 KCTD10 -899922 sc-eQTL 9.71e-01 -0.00722 0.196 0.948 ncMono L2
ENSG00000110921 MVK -995818 sc-eQTL 5.35e-01 0.118 0.189 0.948 ncMono L2
ENSG00000135093 USP30 -445652 sc-eQTL 5.83e-01 -0.111 0.202 0.948 ncMono L2
ENSG00000136003 ISCU 14855 sc-eQTL 1.96e-02 -0.408 0.173 0.948 ncMono L2
ENSG00000136045 PWP1 891638 sc-eQTL 7.62e-01 0.0544 0.18 0.948 ncMono L2
ENSG00000139428 MMAB -996143 sc-eQTL 4.76e-01 0.139 0.194 0.948 ncMono L2
ENSG00000151148 UBE3B -899965 sc-eQTL 8.04e-01 0.0492 0.198 0.948 ncMono L2
ENSG00000174600 CMKLR1 238120 sc-eQTL 8.44e-01 -0.0335 0.17 0.948 ncMono L2
ENSG00000189046 ALKBH2 -516194 sc-eQTL 5.95e-01 0.106 0.198 0.948 ncMono L2
ENSG00000198855 FICD 62160 sc-eQTL 8.52e-01 0.0341 0.182 0.948 ncMono L2
ENSG00000256262 USP30-AS1 -476515 sc-eQTL 8.70e-01 0.0299 0.183 0.948 ncMono L2
ENSG00000075856 SART3 16037 sc-eQTL 8.11e-01 -0.0508 0.212 0.949 pDC L2
ENSG00000076248 UNG -520137 sc-eQTL 6.81e-01 0.0814 0.197 0.949 pDC L2
ENSG00000076555 ACACB -539158 sc-eQTL 7.28e-02 0.363 0.201 0.949 pDC L2
ENSG00000084112 SSH1 -280153 sc-eQTL 6.82e-01 0.0878 0.213 0.949 pDC L2
ENSG00000110851 PRDM4 816165 sc-eQTL 3.34e-01 0.229 0.236 0.949 pDC L2
ENSG00000110876 SELPLG -56522 sc-eQTL 3.50e-01 -0.132 0.141 0.949 pDC L2
ENSG00000110880 CORO1C -154159 sc-eQTL 4.95e-01 0.106 0.155 0.949 pDC L2
ENSG00000110906 KCTD10 -899922 sc-eQTL 3.41e-01 -0.227 0.238 0.949 pDC L2
ENSG00000110921 MVK -995818 sc-eQTL 5.57e-01 0.117 0.199 0.949 pDC L2
ENSG00000135093 USP30 -445652 sc-eQTL 8.09e-03 0.548 0.204 0.949 pDC L2
ENSG00000136003 ISCU 14855 sc-eQTL 1.05e-01 -0.286 0.176 0.949 pDC L2
ENSG00000136045 PWP1 891638 sc-eQTL 1.29e-01 0.317 0.207 0.949 pDC L2
ENSG00000139428 MMAB -996143 sc-eQTL 7.23e-02 0.375 0.207 0.949 pDC L2
ENSG00000151148 UBE3B -899965 sc-eQTL 4.97e-01 -0.154 0.226 0.949 pDC L2
ENSG00000174600 CMKLR1 238120 sc-eQTL 8.82e-02 0.246 0.144 0.949 pDC L2
ENSG00000189046 ALKBH2 -516194 sc-eQTL 8.03e-02 -0.355 0.201 0.949 pDC L2
ENSG00000198855 FICD 62160 sc-eQTL 7.87e-01 0.055 0.203 0.949 pDC L2
ENSG00000256262 USP30-AS1 -476515 sc-eQTL 6.93e-01 0.0744 0.188 0.949 pDC L2
ENSG00000257221 AC007569.1 -51231 sc-eQTL 2.50e-01 0.228 0.197 0.949 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000075856 SART3 16037 eQTL 2.8500000000000002e-21 -0.393 0.0405 0.0 0.0 0.0471
ENSG00000136003 ISCU 14836 eQTL 2.2e-136 -1.19 0.0403 0.0 0.00781 0.0471
ENSG00000183160 TMEM119 -20883 eQTL 0.00252 0.109 0.036 0.0 0.0 0.0471

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000075856 SART3 16037 2.59e-05 2.51e-05 4.87e-06 1.31e-05 4.21e-06 1.17e-05 3.22e-05 3.72e-06 2.22e-05 1.17e-05 2.96e-05 1.23e-05 3.69e-05 1.05e-05 5.53e-06 1.35e-05 1.22e-05 2.03e-05 6.32e-06 5.4e-06 1.13e-05 2.42e-05 2.41e-05 7.36e-06 3.32e-05 6.14e-06 9.89e-06 1.04e-05 2.43e-05 2.02e-05 1.41e-05 1.66e-06 2.24e-06 6.33e-06 9.01e-06 4.59e-06 2.76e-06 2.88e-06 3.71e-06 2.79e-06 1.67e-06 2.95e-05 2.75e-06 2.91e-07 2.11e-06 3.1e-06 3.62e-06 1.4e-06 1.51e-06
ENSG00000136003 ISCU 14836 2.69e-05 2.58e-05 5.11e-06 1.34e-05 4.53e-06 1.21e-05 3.35e-05 3.8e-06 2.31e-05 1.2e-05 3.05e-05 1.31e-05 3.8e-05 1.07e-05 5.71e-06 1.43e-05 1.3e-05 2.1e-05 6.52e-06 5.63e-06 1.19e-05 2.47e-05 2.49e-05 7.51e-06 3.43e-05 6.28e-06 1.04e-05 1.08e-05 2.52e-05 2.09e-05 1.5e-05 1.61e-06 2.29e-06 6.48e-06 9.27e-06 4.81e-06 2.77e-06 2.99e-06 3.81e-06 2.85e-06 1.66e-06 3.1e-05 2.79e-06 3.05e-07 2.06e-06 3.29e-06 3.74e-06 1.47e-06 1.51e-06
ENSG00000183160 TMEM119 -20883 2.13e-05 2.15e-05 4.15e-06 1.21e-05 3.55e-06 9.84e-06 2.62e-05 3.5e-06 1.88e-05 9.83e-06 2.52e-05 9.95e-06 3.22e-05 8.78e-06 5.26e-06 1.15e-05 1.02e-05 1.77e-05 5.31e-06 4.99e-06 9.54e-06 2.01e-05 2e-05 6.12e-06 2.97e-05 5.47e-06 8.36e-06 8.99e-06 2.05e-05 1.71e-05 1.29e-05 1.41e-06 1.91e-06 5.59e-06 7.96e-06 4.54e-06 2.37e-06 2.77e-06 3.34e-06 2.44e-06 1.58e-06 2.55e-05 2.67e-06 2.71e-07 1.97e-06 2.69e-06 3.42e-06 1.52e-06 1.32e-06