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Genes within 1Mb (chr12:108489505:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075856 SART3 -71895 sc-eQTL 4.44e-01 -0.203 0.265 0.056 PB L2
ENSG00000076248 UNG -608069 sc-eQTL 8.56e-01 -0.0437 0.24 0.056 PB L2
ENSG00000076555 ACACB -627090 sc-eQTL 7.93e-01 0.0586 0.222 0.056 PB L2
ENSG00000084112 SSH1 -368085 sc-eQTL 9.13e-02 0.416 0.244 0.056 PB L2
ENSG00000110851 PRDM4 728233 sc-eQTL 9.12e-01 -0.0206 0.186 0.056 PB L2
ENSG00000110876 SELPLG -144454 sc-eQTL 4.50e-01 -0.123 0.162 0.056 PB L2
ENSG00000110880 CORO1C -242091 sc-eQTL 6.64e-01 0.106 0.243 0.056 PB L2
ENSG00000110906 KCTD10 -987854 sc-eQTL 5.84e-01 0.142 0.259 0.056 PB L2
ENSG00000135093 USP30 -533584 sc-eQTL 4.49e-01 0.182 0.24 0.056 PB L2
ENSG00000136003 ISCU -73077 sc-eQTL 7.07e-01 -0.0689 0.183 0.056 PB L2
ENSG00000136045 PWP1 803706 sc-eQTL 1.76e-01 -0.3 0.221 0.056 PB L2
ENSG00000151148 UBE3B -987897 sc-eQTL 1.61e-04 0.905 0.232 0.056 PB L2
ENSG00000189046 ALKBH2 -604126 sc-eQTL 2.84e-01 -0.271 0.251 0.056 PB L2
ENSG00000198855 FICD -25772 sc-eQTL 7.61e-01 -0.0553 0.181 0.056 PB L2
ENSG00000256262 USP30-AS1 -564447 sc-eQTL 2.67e-01 0.261 0.234 0.056 PB L2
ENSG00000257221 AC007569.1 -139163 sc-eQTL 5.45e-01 0.134 0.22 0.056 PB L2
ENSG00000075856 SART3 -71895 sc-eQTL 8.79e-01 -0.0338 0.221 0.051 pDC L2
ENSG00000076248 UNG -608069 sc-eQTL 3.98e-01 -0.175 0.206 0.051 pDC L2
ENSG00000076555 ACACB -627090 sc-eQTL 8.38e-01 -0.0435 0.212 0.051 pDC L2
ENSG00000084112 SSH1 -368085 sc-eQTL 2.53e-01 0.255 0.222 0.051 pDC L2
ENSG00000110851 PRDM4 728233 sc-eQTL 1.56e-01 0.351 0.246 0.051 pDC L2
ENSG00000110876 SELPLG -144454 sc-eQTL 1.57e-01 0.209 0.147 0.051 pDC L2
ENSG00000110880 CORO1C -242091 sc-eQTL 2.63e-01 0.181 0.162 0.051 pDC L2
ENSG00000110906 KCTD10 -987854 sc-eQTL 2.91e-01 0.263 0.249 0.051 pDC L2
ENSG00000135093 USP30 -533584 sc-eQTL 2.35e-01 -0.259 0.218 0.051 pDC L2
ENSG00000136003 ISCU -73077 sc-eQTL 5.73e-01 0.104 0.185 0.051 pDC L2
ENSG00000136045 PWP1 803706 sc-eQTL 7.14e-01 -0.0803 0.219 0.051 pDC L2
ENSG00000151148 UBE3B -987897 sc-eQTL 8.21e-01 0.0534 0.236 0.051 pDC L2
ENSG00000174600 CMKLR1 150188 sc-eQTL 7.38e-01 -0.0507 0.151 0.051 pDC L2
ENSG00000189046 ALKBH2 -604126 sc-eQTL 8.05e-01 0.0525 0.213 0.051 pDC L2
ENSG00000198855 FICD -25772 sc-eQTL 9.21e-01 0.0212 0.213 0.051 pDC L2
ENSG00000256262 USP30-AS1 -564447 sc-eQTL 3.37e-01 -0.189 0.196 0.051 pDC L2
ENSG00000257221 AC007569.1 -139163 sc-eQTL 6.58e-01 -0.0918 0.207 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000075856 SART3 -71895 eQTL 0.033 -0.114 0.0536 0.0 0.0 0.0299
ENSG00000257221 AC007569.1 -139182 eQTL 0.000178 -0.324 0.086 0.0 0.0 0.0299
ENSG00000258136 AC007622.2 752950 eQTL 0.0495 -0.205 0.104 0.0 0.0 0.0299

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000076248 \N -608069 3.14e-07 1.56e-07 6.45e-08 2.26e-07 1.1e-07 7.75e-08 2.24e-07 6.57e-08 1.85e-07 1.05e-07 1.69e-07 1.31e-07 2.29e-07 8.15e-08 5.97e-08 9.6e-08 5.57e-08 2.04e-07 7.36e-08 6.16e-08 1.27e-07 1.76e-07 1.69e-07 4.17e-08 2.17e-07 1.56e-07 1.29e-07 1.17e-07 1.37e-07 1.38e-07 1.21e-07 4.93e-08 4.37e-08 9.5e-08 4.78e-08 3.3e-08 5.02e-08 6.78e-08 6.33e-08 5.56e-08 6.21e-08 1.6e-07 3.13e-08 1.08e-08 3.34e-08 6.68e-09 7.66e-08 2.23e-09 4.55e-08
ENSG00000257221 AC007569.1 -139182 3.61e-06 3.29e-06 6.52e-07 1.96e-06 9.29e-07 7.26e-07 2.53e-06 9.98e-07 2.69e-06 1.67e-06 3.22e-06 1.98e-06 5.05e-06 1.35e-06 1e-06 2.01e-06 1.56e-06 2.12e-06 1.43e-06 9.91e-07 1.95e-06 3.49e-06 3.17e-06 1.76e-06 4.31e-06 1.27e-06 1.77e-06 1.5e-06 3.88e-06 3.08e-06 1.98e-06 5.76e-07 7.35e-07 1.83e-06 1.91e-06 9.06e-07 9.39e-07 4.72e-07 1.32e-06 3.82e-07 4.72e-07 3.92e-06 5.42e-07 1.68e-07 3.58e-07 3.54e-07 6.48e-07 2.41e-07 3.53e-07