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Genes within 1Mb (chr12:106316112:CT:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -777437 sc-eQTL 1.04e-01 -0.0943 0.0578 0.34 B L1
ENSG00000013503 POLR3B -41636 sc-eQTL 6.82e-01 0.0345 0.0843 0.34 B L1
ENSG00000111785 RIC8B -458509 sc-eQTL 8.34e-01 0.0141 0.067 0.34 B L1
ENSG00000120832 MTERF2 -671048 sc-eQTL 3.29e-01 -0.0905 0.0925 0.34 B L1
ENSG00000136026 CKAP4 11833 sc-eQTL 9.04e-01 -0.00525 0.0436 0.34 B L1
ENSG00000151135 TMEM263 -639607 sc-eQTL 2.63e-01 -0.073 0.065 0.34 B L1
ENSG00000166046 TCP11L2 14183 sc-eQTL 4.73e-01 -0.0375 0.0523 0.34 B L1
ENSG00000008405 CRY1 -777437 sc-eQTL 8.44e-01 -0.00759 0.0386 0.34 CD4T L1
ENSG00000013503 POLR3B -41636 sc-eQTL 1.48e-02 -0.149 0.0606 0.34 CD4T L1
ENSG00000111785 RIC8B -458509 sc-eQTL 9.24e-01 0.00574 0.0605 0.34 CD4T L1
ENSG00000120832 MTERF2 -671048 sc-eQTL 6.29e-01 -0.0359 0.0743 0.34 CD4T L1
ENSG00000136026 CKAP4 11833 sc-eQTL 2.25e-07 -0.264 0.0492 0.34 CD4T L1
ENSG00000151135 TMEM263 -639607 sc-eQTL 1.91e-01 -0.0767 0.0585 0.34 CD4T L1
ENSG00000166046 TCP11L2 14183 sc-eQTL 1.78e-07 0.27 0.05 0.34 CD4T L1
ENSG00000260329 AC007541.1 -639385 sc-eQTL 7.99e-01 -0.0217 0.085 0.34 CD4T L1
ENSG00000008405 CRY1 -777437 sc-eQTL 5.08e-01 -0.0329 0.0496 0.34 CD8T L1
ENSG00000013503 POLR3B -41636 sc-eQTL 6.96e-01 0.0287 0.0736 0.34 CD8T L1
ENSG00000111785 RIC8B -458509 sc-eQTL 1.70e-01 -0.102 0.0737 0.34 CD8T L1
ENSG00000120832 MTERF2 -671048 sc-eQTL 7.98e-01 0.0197 0.0767 0.34 CD8T L1
ENSG00000136026 CKAP4 11833 sc-eQTL 1.82e-01 -0.0648 0.0484 0.34 CD8T L1
ENSG00000151135 TMEM263 -639607 sc-eQTL 7.11e-01 0.0235 0.0633 0.34 CD8T L1
ENSG00000166046 TCP11L2 14183 sc-eQTL 2.92e-01 0.0454 0.043 0.34 CD8T L1
ENSG00000260329 AC007541.1 -639385 sc-eQTL 8.88e-01 -0.013 0.0926 0.34 CD8T L1
ENSG00000008405 CRY1 -777437 sc-eQTL 7.39e-01 0.0263 0.079 0.342 DC L1
ENSG00000013503 POLR3B -41636 sc-eQTL 5.77e-01 0.0471 0.0843 0.342 DC L1
ENSG00000111785 RIC8B -458509 sc-eQTL 1.77e-01 -0.118 0.0869 0.342 DC L1
ENSG00000120832 MTERF2 -671048 sc-eQTL 8.55e-01 -0.0148 0.0811 0.342 DC L1
ENSG00000136026 CKAP4 11833 sc-eQTL 4.17e-02 -0.118 0.0574 0.342 DC L1
ENSG00000151135 TMEM263 -639607 sc-eQTL 2.82e-01 -0.087 0.0807 0.342 DC L1
ENSG00000166046 TCP11L2 14183 sc-eQTL 6.21e-01 0.0432 0.0871 0.342 DC L1
ENSG00000008405 CRY1 -777437 sc-eQTL 7.42e-01 -0.0202 0.0612 0.34 Mono L1
ENSG00000013503 POLR3B -41636 sc-eQTL 7.05e-02 0.133 0.073 0.34 Mono L1
ENSG00000111785 RIC8B -458509 sc-eQTL 2.76e-01 0.0769 0.0704 0.34 Mono L1
ENSG00000136026 CKAP4 11833 sc-eQTL 8.38e-03 -0.138 0.0518 0.34 Mono L1
ENSG00000166046 TCP11L2 14183 sc-eQTL 5.34e-01 0.0381 0.0611 0.34 Mono L1
ENSG00000008405 CRY1 -777437 sc-eQTL 7.67e-01 -0.0132 0.0445 0.341 NK L1
ENSG00000013503 POLR3B -41636 sc-eQTL 8.39e-01 0.0162 0.0798 0.341 NK L1
ENSG00000074590 NUAK1 176079 sc-eQTL 3.46e-01 -0.0741 0.0785 0.341 NK L1
ENSG00000111785 RIC8B -458509 sc-eQTL 9.31e-02 -0.125 0.0739 0.341 NK L1
ENSG00000120832 MTERF2 -671048 sc-eQTL 9.09e-01 0.00873 0.0766 0.341 NK L1
ENSG00000136026 CKAP4 11833 sc-eQTL 1.18e-01 -0.112 0.071 0.341 NK L1
ENSG00000151135 TMEM263 -639607 sc-eQTL 8.03e-01 -0.0193 0.0771 0.341 NK L1
ENSG00000166046 TCP11L2 14183 sc-eQTL 3.64e-04 0.229 0.0631 0.341 NK L1
ENSG00000260329 AC007541.1 -639385 sc-eQTL 7.88e-01 -0.0251 0.0929 0.341 NK L1
ENSG00000008405 CRY1 -777437 sc-eQTL 8.59e-01 -0.00853 0.0481 0.34 Other_T L1
ENSG00000013503 POLR3B -41636 sc-eQTL 3.09e-01 -0.0917 0.0899 0.34 Other_T L1
ENSG00000111785 RIC8B -458509 sc-eQTL 9.35e-01 -0.00517 0.0632 0.34 Other_T L1
ENSG00000120832 MTERF2 -671048 sc-eQTL 4.09e-01 0.0624 0.0754 0.34 Other_T L1
ENSG00000136026 CKAP4 11833 sc-eQTL 8.28e-01 -0.0123 0.0565 0.34 Other_T L1
ENSG00000151135 TMEM263 -639607 sc-eQTL 7.51e-01 -0.0251 0.0789 0.34 Other_T L1
ENSG00000166046 TCP11L2 14183 sc-eQTL 3.03e-03 0.204 0.0679 0.34 Other_T L1
ENSG00000260329 AC007541.1 -639385 sc-eQTL 9.06e-01 0.0101 0.0854 0.34 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -777437 sc-eQTL 2.70e-01 0.104 0.0938 0.329 B_Activated L2
ENSG00000013503 POLR3B -41636 sc-eQTL 5.26e-01 0.0588 0.0925 0.329 B_Activated L2
ENSG00000111785 RIC8B -458509 sc-eQTL 4.83e-01 0.066 0.0939 0.329 B_Activated L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 2.82e-01 -0.0786 0.0728 0.329 B_Activated L2
ENSG00000136026 CKAP4 11833 sc-eQTL 4.24e-01 -0.0705 0.0879 0.329 B_Activated L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 7.94e-01 0.0256 0.0982 0.329 B_Activated L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 6.17e-01 -0.0491 0.098 0.329 B_Activated L2
ENSG00000008405 CRY1 -777437 sc-eQTL 9.94e-02 -0.147 0.0889 0.339 B_Intermediate L2
ENSG00000013503 POLR3B -41636 sc-eQTL 8.32e-01 -0.021 0.0988 0.339 B_Intermediate L2
ENSG00000111785 RIC8B -458509 sc-eQTL 2.60e-01 0.0986 0.0874 0.339 B_Intermediate L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 1.92e-02 -0.219 0.0929 0.339 B_Intermediate L2
ENSG00000136026 CKAP4 11833 sc-eQTL 8.25e-01 -0.0162 0.0731 0.339 B_Intermediate L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 8.90e-01 -0.0129 0.0936 0.339 B_Intermediate L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 4.13e-01 -0.0695 0.0848 0.339 B_Intermediate L2
ENSG00000008405 CRY1 -777437 sc-eQTL 2.74e-01 0.0998 0.091 0.338 B_Memory L2
ENSG00000013503 POLR3B -41636 sc-eQTL 1.74e-02 -0.228 0.095 0.338 B_Memory L2
ENSG00000111785 RIC8B -458509 sc-eQTL 5.89e-02 -0.171 0.0899 0.338 B_Memory L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 5.96e-01 -0.0433 0.0817 0.338 B_Memory L2
ENSG00000136026 CKAP4 11833 sc-eQTL 1.26e-01 -0.124 0.0809 0.338 B_Memory L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 2.26e-01 -0.112 0.0921 0.338 B_Memory L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 6.76e-01 -0.0339 0.081 0.338 B_Memory L2
ENSG00000008405 CRY1 -777437 sc-eQTL 4.31e-01 -0.0611 0.0774 0.34 B_Naive1 L2
ENSG00000013503 POLR3B -41636 sc-eQTL 4.00e-01 0.0734 0.0869 0.34 B_Naive1 L2
ENSG00000111785 RIC8B -458509 sc-eQTL 3.15e-01 0.0855 0.0849 0.34 B_Naive1 L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 3.89e-01 -0.0804 0.0932 0.34 B_Naive1 L2
ENSG00000136026 CKAP4 11833 sc-eQTL 1.90e-01 -0.0859 0.0654 0.34 B_Naive1 L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 3.29e-01 -0.0901 0.0921 0.34 B_Naive1 L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 6.86e-01 -0.0261 0.0644 0.34 B_Naive1 L2
ENSG00000008405 CRY1 -777437 sc-eQTL 7.90e-01 -0.0249 0.0936 0.337 B_Naive2 L2
ENSG00000013503 POLR3B -41636 sc-eQTL 7.97e-01 -0.0243 0.0944 0.337 B_Naive2 L2
ENSG00000111785 RIC8B -458509 sc-eQTL 1.61e-01 -0.117 0.0835 0.337 B_Naive2 L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 4.00e-01 0.0804 0.0952 0.337 B_Naive2 L2
ENSG00000136026 CKAP4 11833 sc-eQTL 4.99e-01 -0.0554 0.0818 0.337 B_Naive2 L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 7.49e-01 -0.0305 0.095 0.337 B_Naive2 L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 7.46e-01 -0.0226 0.0698 0.337 B_Naive2 L2
ENSG00000008405 CRY1 -777437 sc-eQTL 3.74e-01 -0.0663 0.0745 0.332 CD4_CTL L2
ENSG00000013503 POLR3B -41636 sc-eQTL 4.01e-01 0.0761 0.0905 0.332 CD4_CTL L2
ENSG00000111785 RIC8B -458509 sc-eQTL 9.16e-01 0.0101 0.0955 0.332 CD4_CTL L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 4.23e-02 0.184 0.0903 0.332 CD4_CTL L2
ENSG00000136026 CKAP4 11833 sc-eQTL 8.10e-01 -0.018 0.0748 0.332 CD4_CTL L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 3.66e-01 -0.0877 0.0967 0.332 CD4_CTL L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 2.80e-02 0.207 0.0934 0.332 CD4_CTL L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 8.95e-01 0.0107 0.0813 0.332 CD4_CTL L2
ENSG00000008405 CRY1 -777437 sc-eQTL 2.29e-01 0.0544 0.0451 0.34 CD4_Naive L2
ENSG00000013503 POLR3B -41636 sc-eQTL 1.05e-01 -0.111 0.0683 0.34 CD4_Naive L2
ENSG00000111785 RIC8B -458509 sc-eQTL 7.77e-01 0.0184 0.065 0.34 CD4_Naive L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 7.83e-01 -0.0238 0.0864 0.34 CD4_Naive L2
ENSG00000136026 CKAP4 11833 sc-eQTL 3.52e-06 -0.267 0.0561 0.34 CD4_Naive L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 3.85e-01 -0.055 0.0632 0.34 CD4_Naive L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 1.36e-07 0.302 0.0553 0.34 CD4_Naive L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 7.41e-01 -0.0295 0.0893 0.34 CD4_Naive L2
ENSG00000008405 CRY1 -777437 sc-eQTL 9.61e-01 -0.00277 0.0564 0.34 CD4_TCM L2
ENSG00000013503 POLR3B -41636 sc-eQTL 3.75e-01 -0.0688 0.0774 0.34 CD4_TCM L2
ENSG00000111785 RIC8B -458509 sc-eQTL 4.92e-01 -0.0558 0.081 0.34 CD4_TCM L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 5.33e-02 -0.18 0.0925 0.34 CD4_TCM L2
ENSG00000136026 CKAP4 11833 sc-eQTL 3.10e-03 -0.167 0.0558 0.34 CD4_TCM L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 1.71e-02 -0.184 0.0765 0.34 CD4_TCM L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 8.70e-04 0.206 0.0611 0.34 CD4_TCM L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 6.29e-01 0.0454 0.094 0.34 CD4_TCM L2
ENSG00000008405 CRY1 -777437 sc-eQTL 4.27e-01 0.0624 0.0784 0.34 CD4_TEM L2
ENSG00000013503 POLR3B -41636 sc-eQTL 1.36e-01 -0.147 0.0979 0.34 CD4_TEM L2
ENSG00000111785 RIC8B -458509 sc-eQTL 6.93e-01 0.0356 0.09 0.34 CD4_TEM L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 7.43e-01 -0.0316 0.0962 0.34 CD4_TEM L2
ENSG00000136026 CKAP4 11833 sc-eQTL 2.23e-03 -0.234 0.0755 0.34 CD4_TEM L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 7.62e-01 0.0268 0.0886 0.34 CD4_TEM L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 3.80e-03 0.222 0.0757 0.34 CD4_TEM L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 4.64e-01 0.0682 0.0929 0.34 CD4_TEM L2
ENSG00000008405 CRY1 -777437 sc-eQTL 8.52e-01 0.0109 0.0586 0.34 CD8_CTL L2
ENSG00000013503 POLR3B -41636 sc-eQTL 7.66e-02 0.156 0.0876 0.34 CD8_CTL L2
ENSG00000111785 RIC8B -458509 sc-eQTL 2.59e-01 -0.0936 0.0826 0.34 CD8_CTL L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 2.46e-01 -0.106 0.0914 0.34 CD8_CTL L2
ENSG00000136026 CKAP4 11833 sc-eQTL 6.53e-01 0.0353 0.0785 0.34 CD8_CTL L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 2.87e-02 0.165 0.0748 0.34 CD8_CTL L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 2.22e-03 0.255 0.0825 0.34 CD8_CTL L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 3.77e-01 -0.0825 0.0933 0.34 CD8_CTL L2
ENSG00000008405 CRY1 -777437 sc-eQTL 7.17e-01 0.025 0.0688 0.34 CD8_Naive L2
ENSG00000013503 POLR3B -41636 sc-eQTL 7.10e-02 -0.15 0.0828 0.34 CD8_Naive L2
ENSG00000111785 RIC8B -458509 sc-eQTL 7.32e-01 0.0305 0.0889 0.34 CD8_Naive L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 3.00e-01 0.0945 0.091 0.34 CD8_Naive L2
ENSG00000136026 CKAP4 11833 sc-eQTL 2.00e-01 -0.0954 0.0742 0.34 CD8_Naive L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 1.70e-02 -0.188 0.0782 0.34 CD8_Naive L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 5.79e-01 -0.0369 0.0664 0.34 CD8_Naive L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 9.11e-01 0.0105 0.0938 0.34 CD8_Naive L2
ENSG00000008405 CRY1 -777437 sc-eQTL 5.38e-02 0.162 0.0835 0.326 CD8_TCM L2
ENSG00000013503 POLR3B -41636 sc-eQTL 3.37e-01 0.0963 0.1 0.326 CD8_TCM L2
ENSG00000111785 RIC8B -458509 sc-eQTL 3.58e-01 -0.0886 0.0961 0.326 CD8_TCM L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 5.97e-01 0.0512 0.0967 0.326 CD8_TCM L2
ENSG00000136026 CKAP4 11833 sc-eQTL 8.21e-01 0.0198 0.0875 0.326 CD8_TCM L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 3.99e-01 -0.0843 0.0998 0.326 CD8_TCM L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 9.30e-01 -0.00739 0.0844 0.326 CD8_TCM L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 3.39e-01 0.0873 0.0912 0.326 CD8_TCM L2
ENSG00000008405 CRY1 -777437 sc-eQTL 7.56e-01 0.0269 0.0864 0.342 CD8_TEM L2
ENSG00000013503 POLR3B -41636 sc-eQTL 3.85e-01 -0.0851 0.0977 0.342 CD8_TEM L2
ENSG00000111785 RIC8B -458509 sc-eQTL 7.53e-01 -0.0295 0.0936 0.342 CD8_TEM L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 7.49e-01 0.0314 0.0981 0.342 CD8_TEM L2
ENSG00000136026 CKAP4 11833 sc-eQTL 6.64e-01 -0.0391 0.09 0.342 CD8_TEM L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 2.29e-01 0.118 0.0981 0.342 CD8_TEM L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 9.57e-01 -0.00505 0.0938 0.342 CD8_TEM L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 2.19e-01 -0.106 0.0863 0.342 CD8_TEM L2
ENSG00000008405 CRY1 -777437 sc-eQTL 9.13e-01 -0.00775 0.071 0.34 MAIT L2
ENSG00000013503 POLR3B -41636 sc-eQTL 1.87e-01 -0.118 0.0891 0.34 MAIT L2
ENSG00000111785 RIC8B -458509 sc-eQTL 7.37e-02 -0.142 0.0788 0.34 MAIT L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 3.35e-01 0.0837 0.0866 0.34 MAIT L2
ENSG00000136026 CKAP4 11833 sc-eQTL 2.30e-01 -0.0962 0.08 0.34 MAIT L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 8.34e-02 -0.162 0.0932 0.34 MAIT L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 4.34e-03 0.231 0.0802 0.34 MAIT L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 3.55e-01 -0.0814 0.0878 0.34 MAIT L2
ENSG00000008405 CRY1 -777437 sc-eQTL 3.51e-01 0.0663 0.0709 0.349 NK_CD56bright L2
ENSG00000013503 POLR3B -41636 sc-eQTL 3.50e-01 0.0839 0.0897 0.349 NK_CD56bright L2
ENSG00000074590 NUAK1 176079 sc-eQTL 2.07e-01 -0.099 0.0781 0.349 NK_CD56bright L2
ENSG00000111785 RIC8B -458509 sc-eQTL 5.34e-01 -0.0606 0.0974 0.349 NK_CD56bright L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 1.57e-01 -0.129 0.0908 0.349 NK_CD56bright L2
ENSG00000136026 CKAP4 11833 sc-eQTL 5.56e-01 0.0434 0.0735 0.349 NK_CD56bright L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 4.42e-01 0.0701 0.091 0.349 NK_CD56bright L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 1.88e-01 0.124 0.0934 0.349 NK_CD56bright L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 2.73e-01 -0.0985 0.0896 0.349 NK_CD56bright L2
ENSG00000008405 CRY1 -777437 sc-eQTL 1.79e-01 -0.0725 0.0538 0.341 NK_CD56dim L2
ENSG00000013503 POLR3B -41636 sc-eQTL 7.62e-01 -0.0246 0.0811 0.341 NK_CD56dim L2
ENSG00000074590 NUAK1 176079 sc-eQTL 8.71e-01 -0.0129 0.0793 0.341 NK_CD56dim L2
ENSG00000111785 RIC8B -458509 sc-eQTL 4.47e-01 -0.0617 0.0811 0.341 NK_CD56dim L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 5.33e-01 0.0503 0.0806 0.341 NK_CD56dim L2
ENSG00000136026 CKAP4 11833 sc-eQTL 1.07e-01 -0.131 0.0809 0.341 NK_CD56dim L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 5.25e-01 -0.0535 0.084 0.341 NK_CD56dim L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 6.91e-03 0.191 0.0701 0.341 NK_CD56dim L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 9.79e-01 -0.00245 0.0939 0.341 NK_CD56dim L2
ENSG00000008405 CRY1 -777437 sc-eQTL 7.37e-01 0.0259 0.077 0.347 NK_HLA L2
ENSG00000013503 POLR3B -41636 sc-eQTL 4.76e-01 -0.0665 0.093 0.347 NK_HLA L2
ENSG00000074590 NUAK1 176079 sc-eQTL 9.96e-01 0.000503 0.0908 0.347 NK_HLA L2
ENSG00000111785 RIC8B -458509 sc-eQTL 5.07e-01 0.0633 0.0953 0.347 NK_HLA L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 3.35e-01 0.093 0.0963 0.347 NK_HLA L2
ENSG00000136026 CKAP4 11833 sc-eQTL 5.37e-01 -0.0518 0.0838 0.347 NK_HLA L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 6.36e-01 -0.0456 0.096 0.347 NK_HLA L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 4.94e-03 0.263 0.0925 0.347 NK_HLA L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 6.09e-01 0.0453 0.0884 0.347 NK_HLA L2
ENSG00000008405 CRY1 -777437 sc-eQTL 6.29e-01 0.0306 0.0633 0.341 NK_cytokine L2
ENSG00000013503 POLR3B -41636 sc-eQTL 8.98e-01 0.0117 0.0908 0.341 NK_cytokine L2
ENSG00000074590 NUAK1 176079 sc-eQTL 9.90e-01 -0.0011 0.0839 0.341 NK_cytokine L2
ENSG00000111785 RIC8B -458509 sc-eQTL 1.31e-01 -0.13 0.0856 0.341 NK_cytokine L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 8.31e-01 -0.0188 0.0879 0.341 NK_cytokine L2
ENSG00000136026 CKAP4 11833 sc-eQTL 2.38e-01 -0.0979 0.0827 0.341 NK_cytokine L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 6.81e-01 -0.0371 0.0902 0.341 NK_cytokine L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 2.10e-02 0.171 0.0733 0.341 NK_cytokine L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 8.28e-01 -0.02 0.0921 0.341 NK_cytokine L2
ENSG00000008405 CRY1 -777437 sc-eQTL 8.09e-01 0.0246 0.102 0.348 PB L2
ENSG00000013503 POLR3B -41636 sc-eQTL 1.60e-01 0.153 0.108 0.348 PB L2
ENSG00000111785 RIC8B -458509 sc-eQTL 1.04e-01 0.158 0.0964 0.348 PB L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 6.25e-01 -0.0449 0.0917 0.348 PB L2
ENSG00000136026 CKAP4 11833 sc-eQTL 2.86e-01 -0.0655 0.061 0.348 PB L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 8.56e-01 0.0143 0.0784 0.348 PB L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 3.47e-02 0.215 0.1 0.348 PB L2
ENSG00000008405 CRY1 -777437 sc-eQTL 6.15e-01 -0.0318 0.063 0.343 Pro_T L2
ENSG00000013503 POLR3B -41636 sc-eQTL 7.18e-01 0.0329 0.091 0.343 Pro_T L2
ENSG00000111785 RIC8B -458509 sc-eQTL 4.19e-01 0.0692 0.0856 0.343 Pro_T L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 3.89e-01 -0.074 0.0858 0.343 Pro_T L2
ENSG00000136026 CKAP4 11833 sc-eQTL 8.67e-01 0.00795 0.0476 0.343 Pro_T L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 9.59e-01 -0.00412 0.0795 0.343 Pro_T L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 1.46e-01 0.106 0.073 0.343 Pro_T L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 8.47e-01 0.0147 0.0759 0.343 Pro_T L2
ENSG00000008405 CRY1 -777437 sc-eQTL 6.28e-01 -0.0382 0.0787 0.34 Treg L2
ENSG00000013503 POLR3B -41636 sc-eQTL 8.00e-01 -0.0237 0.0935 0.34 Treg L2
ENSG00000111785 RIC8B -458509 sc-eQTL 1.19e-02 0.223 0.0878 0.34 Treg L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 5.97e-01 0.051 0.0965 0.34 Treg L2
ENSG00000136026 CKAP4 11833 sc-eQTL 1.56e-01 -0.0977 0.0687 0.34 Treg L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 2.84e-02 -0.195 0.0884 0.34 Treg L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 2.00e-02 0.172 0.0735 0.34 Treg L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 2.88e-01 -0.0934 0.0876 0.34 Treg L2
ENSG00000008405 CRY1 -777437 sc-eQTL 5.48e-01 -0.0537 0.0893 0.346 cDC L2
ENSG00000013503 POLR3B -41636 sc-eQTL 2.00e-01 0.11 0.0856 0.346 cDC L2
ENSG00000111785 RIC8B -458509 sc-eQTL 1.04e-01 -0.147 0.0902 0.346 cDC L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 6.82e-01 -0.0321 0.0781 0.346 cDC L2
ENSG00000136026 CKAP4 11833 sc-eQTL 3.30e-01 -0.0622 0.0637 0.346 cDC L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 5.63e-01 -0.0484 0.0836 0.346 cDC L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 3.00e-01 0.0988 0.095 0.346 cDC L2
ENSG00000008405 CRY1 -777437 sc-eQTL 3.13e-01 0.0776 0.0766 0.34 cMono_IL1B L2
ENSG00000013503 POLR3B -41636 sc-eQTL 1.68e-01 0.12 0.0864 0.34 cMono_IL1B L2
ENSG00000111785 RIC8B -458509 sc-eQTL 1.15e-01 0.124 0.0782 0.34 cMono_IL1B L2
ENSG00000136026 CKAP4 11833 sc-eQTL 1.67e-03 -0.185 0.0581 0.34 cMono_IL1B L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 1.35e-01 0.106 0.0706 0.34 cMono_IL1B L2
ENSG00000008405 CRY1 -777437 sc-eQTL 7.04e-01 -0.034 0.0895 0.34 cMono_S100A L2
ENSG00000013503 POLR3B -41636 sc-eQTL 2.98e-01 -0.0928 0.089 0.34 cMono_S100A L2
ENSG00000111785 RIC8B -458509 sc-eQTL 7.72e-02 0.145 0.0819 0.34 cMono_S100A L2
ENSG00000136026 CKAP4 11833 sc-eQTL 8.94e-02 -0.111 0.0648 0.34 cMono_S100A L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 4.94e-01 -0.0523 0.0764 0.34 cMono_S100A L2
ENSG00000008405 CRY1 -777437 sc-eQTL 7.86e-01 0.0272 0.0999 0.364 gdT L2
ENSG00000013503 POLR3B -41636 sc-eQTL 2.05e-01 -0.133 0.104 0.364 gdT L2
ENSG00000111785 RIC8B -458509 sc-eQTL 3.05e-01 0.109 0.106 0.364 gdT L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 8.21e-01 -0.0258 0.114 0.364 gdT L2
ENSG00000136026 CKAP4 11833 sc-eQTL 4.47e-01 -0.0761 0.0997 0.364 gdT L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 4.25e-01 -0.0833 0.104 0.364 gdT L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 5.42e-01 0.0663 0.108 0.364 gdT L2
ENSG00000260329 AC007541.1 -639385 sc-eQTL 5.90e-01 0.056 0.104 0.364 gdT L2
ENSG00000008405 CRY1 -777437 sc-eQTL 4.41e-01 -0.0693 0.0897 0.347 intMono L2
ENSG00000013503 POLR3B -41636 sc-eQTL 9.68e-01 0.00356 0.0873 0.347 intMono L2
ENSG00000111785 RIC8B -458509 sc-eQTL 9.13e-02 -0.144 0.0847 0.347 intMono L2
ENSG00000136026 CKAP4 11833 sc-eQTL 9.48e-02 -0.148 0.0884 0.347 intMono L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 5.72e-01 0.0565 0.0997 0.347 intMono L2
ENSG00000008405 CRY1 -777437 sc-eQTL 2.23e-01 -0.0774 0.0633 0.348 ncMono L2
ENSG00000013503 POLR3B -41636 sc-eQTL 1.33e-01 0.123 0.0814 0.348 ncMono L2
ENSG00000111785 RIC8B -458509 sc-eQTL 5.97e-01 0.0421 0.0794 0.348 ncMono L2
ENSG00000136026 CKAP4 11833 sc-eQTL 1.90e-01 -0.111 0.0843 0.348 ncMono L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 1.68e-01 0.115 0.0828 0.348 ncMono L2
ENSG00000008405 CRY1 -777437 sc-eQTL 9.16e-01 0.0103 0.0973 0.345 pDC L2
ENSG00000013503 POLR3B -41636 sc-eQTL 7.31e-01 -0.0366 0.106 0.345 pDC L2
ENSG00000111785 RIC8B -458509 sc-eQTL 4.59e-01 -0.0759 0.102 0.345 pDC L2
ENSG00000120832 MTERF2 -671048 sc-eQTL 8.17e-01 -0.0223 0.096 0.345 pDC L2
ENSG00000136026 CKAP4 11833 sc-eQTL 2.00e-01 -0.0873 0.0677 0.345 pDC L2
ENSG00000151135 TMEM263 -639607 sc-eQTL 5.29e-01 -0.0684 0.108 0.345 pDC L2
ENSG00000166046 TCP11L2 14183 sc-eQTL 9.98e-01 -0.000229 0.102 0.345 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -777437 sc-eQTL 3.55e-01 -0.0754 0.0815 0.34 B_Memory LOneK1K
ENSG00000013503 POLR3B -41636 sc-eQTL 4.85e-01 -0.0657 0.0941 0.34 B_Memory LOneK1K
ENSG00000111785 RIC8B -458509 sc-eQTL 7.54e-01 0.0254 0.0808 0.34 B_Memory LOneK1K
ENSG00000120832 MTERF2 -671048 sc-eQTL 4.26e-02 -0.185 0.0906 0.34 B_Memory LOneK1K
ENSG00000136026 CKAP4 11833 sc-eQTL 1.87e-01 -0.0838 0.0634 0.34 B_Memory LOneK1K
ENSG00000151135 TMEM263 -639607 sc-eQTL 9.70e-01 -0.00341 0.0894 0.34 B_Memory LOneK1K
ENSG00000166046 TCP11L2 14183 sc-eQTL 9.04e-02 -0.13 0.0765 0.34 B_Memory LOneK1K
ENSG00000008405 CRY1 -777437 sc-eQTL 4.46e-01 -0.0539 0.0706 0.34 B_Naive LOneK1K
ENSG00000013503 POLR3B -41636 sc-eQTL 7.42e-01 0.0291 0.0885 0.34 B_Naive LOneK1K
ENSG00000111785 RIC8B -458509 sc-eQTL 7.60e-01 -0.0265 0.0866 0.34 B_Naive LOneK1K
ENSG00000120832 MTERF2 -671048 sc-eQTL 6.56e-01 -0.0422 0.0947 0.34 B_Naive LOneK1K
ENSG00000136026 CKAP4 11833 sc-eQTL 2.02e-01 -0.0841 0.0657 0.34 B_Naive LOneK1K
ENSG00000151135 TMEM263 -639607 sc-eQTL 2.82e-01 -0.0961 0.0891 0.34 B_Naive LOneK1K
ENSG00000166046 TCP11L2 14183 sc-eQTL 4.09e-01 -0.0476 0.0575 0.34 B_Naive LOneK1K
ENSG00000008405 CRY1 -777437 sc-eQTL 4.18e-01 0.0601 0.074 0.34 CD14_Mono LOneK1K
ENSG00000013503 POLR3B -41636 sc-eQTL 3.44e-01 0.0776 0.0819 0.34 CD14_Mono LOneK1K
ENSG00000111785 RIC8B -458509 sc-eQTL 9.57e-02 0.126 0.0755 0.34 CD14_Mono LOneK1K
ENSG00000136026 CKAP4 11833 sc-eQTL 3.87e-03 -0.163 0.0559 0.34 CD14_Mono LOneK1K
ENSG00000166046 TCP11L2 14183 sc-eQTL 4.46e-01 0.0463 0.0606 0.34 CD14_Mono LOneK1K
ENSG00000008405 CRY1 -777437 sc-eQTL 4.86e-01 -0.0449 0.0644 0.343 CD16_Mono LOneK1K
ENSG00000013503 POLR3B -41636 sc-eQTL 7.82e-02 0.138 0.0778 0.343 CD16_Mono LOneK1K
ENSG00000111785 RIC8B -458509 sc-eQTL 5.84e-01 -0.0409 0.0746 0.343 CD16_Mono LOneK1K
ENSG00000136026 CKAP4 11833 sc-eQTL 7.76e-02 -0.136 0.0768 0.343 CD16_Mono LOneK1K
ENSG00000166046 TCP11L2 14183 sc-eQTL 3.90e-01 0.069 0.08 0.343 CD16_Mono LOneK1K
ENSG00000008405 CRY1 -777437 sc-eQTL 5.78e-01 -0.0252 0.0453 0.341 NK_CD56dim LOneK1K
ENSG00000013503 POLR3B -41636 sc-eQTL 7.03e-01 -0.0314 0.0823 0.341 NK_CD56dim LOneK1K
ENSG00000074590 NUAK1 176079 sc-eQTL 3.81e-01 -0.0694 0.0791 0.341 NK_CD56dim LOneK1K
ENSG00000111785 RIC8B -458509 sc-eQTL 1.44e-01 -0.111 0.0755 0.341 NK_CD56dim LOneK1K
ENSG00000120832 MTERF2 -671048 sc-eQTL 7.79e-01 0.0221 0.0787 0.341 NK_CD56dim LOneK1K
ENSG00000136026 CKAP4 11833 sc-eQTL 4.52e-02 -0.15 0.0746 0.341 NK_CD56dim LOneK1K
ENSG00000151135 TMEM263 -639607 sc-eQTL 8.01e-01 -0.0202 0.0797 0.341 NK_CD56dim LOneK1K
ENSG00000166046 TCP11L2 14183 sc-eQTL 1.62e-04 0.239 0.0622 0.341 NK_CD56dim LOneK1K
ENSG00000260329 AC007541.1 -639385 sc-eQTL 6.44e-01 -0.043 0.093 0.341 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000013503 POLR3B -41636 eQTL 8.49e-06 -0.129 0.0288 0.0047 0.00964 0.326
ENSG00000074590 NUAK1 176079 eQTL 0.00182 -0.1 0.032 0.00224 0.0 0.326
ENSG00000136026 CKAP4 11833 eQTL 0.000559 -0.0385 0.0111 0.00123 0.0 0.326
ENSG00000166046 TCP11L2 14183 eQTL 1.52e-50 0.223 0.0141 0.0 0.00471 0.326

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000013503 POLR3B -41636 9.68e-05 6.9e-05 9.14e-06 1.44e-05 4.86e-06 1.67e-05 5.41e-05 4.2e-06 3.6e-05 1.2e-05 3.78e-05 1.7e-05 5.54e-05 1.73e-05 9.33e-06 3.12e-05 3.57e-05 3.71e-05 8.18e-06 6.54e-06 1.97e-05 5.51e-05 4.11e-05 9.54e-06 4.87e-05 1.04e-05 1.71e-05 1.39e-05 4.12e-05 2.32e-05 1.9e-05 1.65e-06 3.22e-06 5.89e-06 9.49e-06 4.67e-06 3.69e-06 2.99e-06 3.81e-06 3.13e-06 1.14e-06 5.78e-05 7.15e-06 2.62e-07 2.67e-06 3.29e-06 5.2e-06 1.36e-06 1.56e-06
ENSG00000074590 NUAK1 176079 7.83e-06 9.16e-06 2.55e-06 2.44e-06 6.3e-07 1.92e-06 5.6e-06 6.72e-07 3.58e-06 1.45e-06 3.36e-06 1.68e-06 7.55e-06 1.94e-06 1.09e-06 4.32e-06 5.34e-06 4.01e-06 1.42e-06 9.17e-07 3.64e-06 4.9e-06 5.05e-06 1.49e-06 6.86e-06 2.02e-06 1.82e-06 1.75e-06 4.45e-06 4.18e-06 1.97e-06 5.55e-07 5.47e-07 1.87e-06 1.26e-06 9.79e-07 1.02e-06 4.39e-07 1.31e-06 9.64e-07 3.53e-07 6.25e-06 1.61e-06 1.75e-07 4.33e-07 4.13e-07 1.02e-06 1.49e-07 2.32e-07
ENSG00000136026 CKAP4 11833 0.000186 0.000132 1.28e-05 2.54e-05 1.23e-05 4.45e-05 0.000136 1.02e-05 9.76e-05 3.67e-05 0.000136 4.78e-05 0.000166 5.12e-05 1.9e-05 8.04e-05 5.74e-05 8.55e-05 2.26e-05 1.51e-05 3.75e-05 0.000133 0.000124 2.24e-05 0.000127 2.55e-05 5.37e-05 3.41e-05 0.00011 5.78e-05 6.14e-05 3.57e-06 6.67e-06 1.54e-05 2.01e-05 1.01e-05 4.68e-06 4.97e-06 8.89e-06 5.12e-06 1.87e-06 0.000173 1.61e-05 4.21e-07 7.27e-06 9.8e-06 1.03e-05 2.82e-06 3.26e-06
ENSG00000166046 TCP11L2 14183 0.000181 0.000125 1.17e-05 2.45e-05 1.12e-05 4.03e-05 0.000129 9.54e-06 9.08e-05 3.42e-05 0.000124 4.4e-05 0.000157 4.7e-05 1.71e-05 7.41e-05 5.49e-05 8.02e-05 2.06e-05 1.33e-05 3.51e-05 0.000126 0.000115 2.05e-05 0.00012 2.37e-05 4.8e-05 3.16e-05 0.000105 5.31e-05 5.73e-05 3.3e-06 6.07e-06 1.35e-05 1.96e-05 9.35e-06 4.42e-06 4.69e-06 8.32e-06 4.89e-06 1.78e-06 0.000159 1.56e-05 4.09e-07 6.86e-06 8.54e-06 9.61e-06 2.71e-06 3.13e-06