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Genes within 1Mb (chr12:106314500:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -779049 sc-eQTL 1.04e-01 -0.0943 0.0578 0.34 B L1
ENSG00000013503 POLR3B -43248 sc-eQTL 6.82e-01 0.0345 0.0843 0.34 B L1
ENSG00000111785 RIC8B -460121 sc-eQTL 8.34e-01 0.0141 0.067 0.34 B L1
ENSG00000120832 MTERF2 -672660 sc-eQTL 3.29e-01 -0.0905 0.0925 0.34 B L1
ENSG00000136026 CKAP4 10221 sc-eQTL 9.04e-01 -0.00525 0.0436 0.34 B L1
ENSG00000151135 TMEM263 -641219 sc-eQTL 2.63e-01 -0.073 0.065 0.34 B L1
ENSG00000166046 TCP11L2 12571 sc-eQTL 4.73e-01 -0.0375 0.0523 0.34 B L1
ENSG00000008405 CRY1 -779049 sc-eQTL 8.44e-01 -0.00759 0.0386 0.34 CD4T L1
ENSG00000013503 POLR3B -43248 sc-eQTL 1.48e-02 -0.149 0.0606 0.34 CD4T L1
ENSG00000111785 RIC8B -460121 sc-eQTL 9.24e-01 0.00574 0.0605 0.34 CD4T L1
ENSG00000120832 MTERF2 -672660 sc-eQTL 6.29e-01 -0.0359 0.0743 0.34 CD4T L1
ENSG00000136026 CKAP4 10221 sc-eQTL 2.25e-07 -0.264 0.0492 0.34 CD4T L1
ENSG00000151135 TMEM263 -641219 sc-eQTL 1.91e-01 -0.0767 0.0585 0.34 CD4T L1
ENSG00000166046 TCP11L2 12571 sc-eQTL 1.78e-07 0.27 0.05 0.34 CD4T L1
ENSG00000260329 AC007541.1 -640997 sc-eQTL 7.99e-01 -0.0217 0.085 0.34 CD4T L1
ENSG00000008405 CRY1 -779049 sc-eQTL 5.08e-01 -0.0329 0.0496 0.34 CD8T L1
ENSG00000013503 POLR3B -43248 sc-eQTL 6.96e-01 0.0287 0.0736 0.34 CD8T L1
ENSG00000111785 RIC8B -460121 sc-eQTL 1.70e-01 -0.102 0.0737 0.34 CD8T L1
ENSG00000120832 MTERF2 -672660 sc-eQTL 7.98e-01 0.0197 0.0767 0.34 CD8T L1
ENSG00000136026 CKAP4 10221 sc-eQTL 1.82e-01 -0.0648 0.0484 0.34 CD8T L1
ENSG00000151135 TMEM263 -641219 sc-eQTL 7.11e-01 0.0235 0.0633 0.34 CD8T L1
ENSG00000166046 TCP11L2 12571 sc-eQTL 2.92e-01 0.0454 0.043 0.34 CD8T L1
ENSG00000260329 AC007541.1 -640997 sc-eQTL 8.88e-01 -0.013 0.0926 0.34 CD8T L1
ENSG00000008405 CRY1 -779049 sc-eQTL 7.39e-01 0.0263 0.079 0.342 DC L1
ENSG00000013503 POLR3B -43248 sc-eQTL 5.77e-01 0.0471 0.0843 0.342 DC L1
ENSG00000111785 RIC8B -460121 sc-eQTL 1.77e-01 -0.118 0.0869 0.342 DC L1
ENSG00000120832 MTERF2 -672660 sc-eQTL 8.55e-01 -0.0148 0.0811 0.342 DC L1
ENSG00000136026 CKAP4 10221 sc-eQTL 4.17e-02 -0.118 0.0574 0.342 DC L1
ENSG00000151135 TMEM263 -641219 sc-eQTL 2.82e-01 -0.087 0.0807 0.342 DC L1
ENSG00000166046 TCP11L2 12571 sc-eQTL 6.21e-01 0.0432 0.0871 0.342 DC L1
ENSG00000008405 CRY1 -779049 sc-eQTL 7.42e-01 -0.0202 0.0612 0.34 Mono L1
ENSG00000013503 POLR3B -43248 sc-eQTL 7.05e-02 0.133 0.073 0.34 Mono L1
ENSG00000111785 RIC8B -460121 sc-eQTL 2.76e-01 0.0769 0.0704 0.34 Mono L1
ENSG00000136026 CKAP4 10221 sc-eQTL 8.38e-03 -0.138 0.0518 0.34 Mono L1
ENSG00000166046 TCP11L2 12571 sc-eQTL 5.34e-01 0.0381 0.0611 0.34 Mono L1
ENSG00000008405 CRY1 -779049 sc-eQTL 7.67e-01 -0.0132 0.0445 0.341 NK L1
ENSG00000013503 POLR3B -43248 sc-eQTL 8.39e-01 0.0162 0.0798 0.341 NK L1
ENSG00000074590 NUAK1 174467 sc-eQTL 3.46e-01 -0.0741 0.0785 0.341 NK L1
ENSG00000111785 RIC8B -460121 sc-eQTL 9.31e-02 -0.125 0.0739 0.341 NK L1
ENSG00000120832 MTERF2 -672660 sc-eQTL 9.09e-01 0.00873 0.0766 0.341 NK L1
ENSG00000136026 CKAP4 10221 sc-eQTL 1.18e-01 -0.112 0.071 0.341 NK L1
ENSG00000151135 TMEM263 -641219 sc-eQTL 8.03e-01 -0.0193 0.0771 0.341 NK L1
ENSG00000166046 TCP11L2 12571 sc-eQTL 3.64e-04 0.229 0.0631 0.341 NK L1
ENSG00000260329 AC007541.1 -640997 sc-eQTL 7.88e-01 -0.0251 0.0929 0.341 NK L1
ENSG00000008405 CRY1 -779049 sc-eQTL 8.59e-01 -0.00853 0.0481 0.34 Other_T L1
ENSG00000013503 POLR3B -43248 sc-eQTL 3.09e-01 -0.0917 0.0899 0.34 Other_T L1
ENSG00000111785 RIC8B -460121 sc-eQTL 9.35e-01 -0.00517 0.0632 0.34 Other_T L1
ENSG00000120832 MTERF2 -672660 sc-eQTL 4.09e-01 0.0624 0.0754 0.34 Other_T L1
ENSG00000136026 CKAP4 10221 sc-eQTL 8.28e-01 -0.0123 0.0565 0.34 Other_T L1
ENSG00000151135 TMEM263 -641219 sc-eQTL 7.51e-01 -0.0251 0.0789 0.34 Other_T L1
ENSG00000166046 TCP11L2 12571 sc-eQTL 3.03e-03 0.204 0.0679 0.34 Other_T L1
ENSG00000260329 AC007541.1 -640997 sc-eQTL 9.06e-01 0.0101 0.0854 0.34 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -779049 sc-eQTL 2.70e-01 0.104 0.0938 0.329 B_Activated L2
ENSG00000013503 POLR3B -43248 sc-eQTL 5.26e-01 0.0588 0.0925 0.329 B_Activated L2
ENSG00000111785 RIC8B -460121 sc-eQTL 4.83e-01 0.066 0.0939 0.329 B_Activated L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 2.82e-01 -0.0786 0.0728 0.329 B_Activated L2
ENSG00000136026 CKAP4 10221 sc-eQTL 4.24e-01 -0.0705 0.0879 0.329 B_Activated L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 7.94e-01 0.0256 0.0982 0.329 B_Activated L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 6.17e-01 -0.0491 0.098 0.329 B_Activated L2
ENSG00000008405 CRY1 -779049 sc-eQTL 9.94e-02 -0.147 0.0889 0.339 B_Intermediate L2
ENSG00000013503 POLR3B -43248 sc-eQTL 8.32e-01 -0.021 0.0988 0.339 B_Intermediate L2
ENSG00000111785 RIC8B -460121 sc-eQTL 2.60e-01 0.0986 0.0874 0.339 B_Intermediate L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 1.92e-02 -0.219 0.0929 0.339 B_Intermediate L2
ENSG00000136026 CKAP4 10221 sc-eQTL 8.25e-01 -0.0162 0.0731 0.339 B_Intermediate L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 8.90e-01 -0.0129 0.0936 0.339 B_Intermediate L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 4.13e-01 -0.0695 0.0848 0.339 B_Intermediate L2
ENSG00000008405 CRY1 -779049 sc-eQTL 2.74e-01 0.0998 0.091 0.338 B_Memory L2
ENSG00000013503 POLR3B -43248 sc-eQTL 1.74e-02 -0.228 0.095 0.338 B_Memory L2
ENSG00000111785 RIC8B -460121 sc-eQTL 5.89e-02 -0.171 0.0899 0.338 B_Memory L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 5.96e-01 -0.0433 0.0817 0.338 B_Memory L2
ENSG00000136026 CKAP4 10221 sc-eQTL 1.26e-01 -0.124 0.0809 0.338 B_Memory L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 2.26e-01 -0.112 0.0921 0.338 B_Memory L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 6.76e-01 -0.0339 0.081 0.338 B_Memory L2
ENSG00000008405 CRY1 -779049 sc-eQTL 4.31e-01 -0.0611 0.0774 0.34 B_Naive1 L2
ENSG00000013503 POLR3B -43248 sc-eQTL 4.00e-01 0.0734 0.0869 0.34 B_Naive1 L2
ENSG00000111785 RIC8B -460121 sc-eQTL 3.15e-01 0.0855 0.0849 0.34 B_Naive1 L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 3.89e-01 -0.0804 0.0932 0.34 B_Naive1 L2
ENSG00000136026 CKAP4 10221 sc-eQTL 1.90e-01 -0.0859 0.0654 0.34 B_Naive1 L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 3.29e-01 -0.0901 0.0921 0.34 B_Naive1 L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 6.86e-01 -0.0261 0.0644 0.34 B_Naive1 L2
ENSG00000008405 CRY1 -779049 sc-eQTL 7.90e-01 -0.0249 0.0936 0.337 B_Naive2 L2
ENSG00000013503 POLR3B -43248 sc-eQTL 7.97e-01 -0.0243 0.0944 0.337 B_Naive2 L2
ENSG00000111785 RIC8B -460121 sc-eQTL 1.61e-01 -0.117 0.0835 0.337 B_Naive2 L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 4.00e-01 0.0804 0.0952 0.337 B_Naive2 L2
ENSG00000136026 CKAP4 10221 sc-eQTL 4.99e-01 -0.0554 0.0818 0.337 B_Naive2 L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 7.49e-01 -0.0305 0.095 0.337 B_Naive2 L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 7.46e-01 -0.0226 0.0698 0.337 B_Naive2 L2
ENSG00000008405 CRY1 -779049 sc-eQTL 3.74e-01 -0.0663 0.0745 0.332 CD4_CTL L2
ENSG00000013503 POLR3B -43248 sc-eQTL 4.01e-01 0.0761 0.0905 0.332 CD4_CTL L2
ENSG00000111785 RIC8B -460121 sc-eQTL 9.16e-01 0.0101 0.0955 0.332 CD4_CTL L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 4.23e-02 0.184 0.0903 0.332 CD4_CTL L2
ENSG00000136026 CKAP4 10221 sc-eQTL 8.10e-01 -0.018 0.0748 0.332 CD4_CTL L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 3.66e-01 -0.0877 0.0967 0.332 CD4_CTL L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 2.80e-02 0.207 0.0934 0.332 CD4_CTL L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 8.95e-01 0.0107 0.0813 0.332 CD4_CTL L2
ENSG00000008405 CRY1 -779049 sc-eQTL 2.29e-01 0.0544 0.0451 0.34 CD4_Naive L2
ENSG00000013503 POLR3B -43248 sc-eQTL 1.05e-01 -0.111 0.0683 0.34 CD4_Naive L2
ENSG00000111785 RIC8B -460121 sc-eQTL 7.77e-01 0.0184 0.065 0.34 CD4_Naive L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 7.83e-01 -0.0238 0.0864 0.34 CD4_Naive L2
ENSG00000136026 CKAP4 10221 sc-eQTL 3.52e-06 -0.267 0.0561 0.34 CD4_Naive L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 3.85e-01 -0.055 0.0632 0.34 CD4_Naive L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 1.36e-07 0.302 0.0553 0.34 CD4_Naive L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 7.41e-01 -0.0295 0.0893 0.34 CD4_Naive L2
ENSG00000008405 CRY1 -779049 sc-eQTL 9.61e-01 -0.00277 0.0564 0.34 CD4_TCM L2
ENSG00000013503 POLR3B -43248 sc-eQTL 3.75e-01 -0.0688 0.0774 0.34 CD4_TCM L2
ENSG00000111785 RIC8B -460121 sc-eQTL 4.92e-01 -0.0558 0.081 0.34 CD4_TCM L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 5.33e-02 -0.18 0.0925 0.34 CD4_TCM L2
ENSG00000136026 CKAP4 10221 sc-eQTL 3.10e-03 -0.167 0.0558 0.34 CD4_TCM L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 1.71e-02 -0.184 0.0765 0.34 CD4_TCM L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 8.70e-04 0.206 0.0611 0.34 CD4_TCM L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 6.29e-01 0.0454 0.094 0.34 CD4_TCM L2
ENSG00000008405 CRY1 -779049 sc-eQTL 4.27e-01 0.0624 0.0784 0.34 CD4_TEM L2
ENSG00000013503 POLR3B -43248 sc-eQTL 1.36e-01 -0.147 0.0979 0.34 CD4_TEM L2
ENSG00000111785 RIC8B -460121 sc-eQTL 6.93e-01 0.0356 0.09 0.34 CD4_TEM L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 7.43e-01 -0.0316 0.0962 0.34 CD4_TEM L2
ENSG00000136026 CKAP4 10221 sc-eQTL 2.23e-03 -0.234 0.0755 0.34 CD4_TEM L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 7.62e-01 0.0268 0.0886 0.34 CD4_TEM L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 3.80e-03 0.222 0.0757 0.34 CD4_TEM L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 4.64e-01 0.0682 0.0929 0.34 CD4_TEM L2
ENSG00000008405 CRY1 -779049 sc-eQTL 8.52e-01 0.0109 0.0586 0.34 CD8_CTL L2
ENSG00000013503 POLR3B -43248 sc-eQTL 7.66e-02 0.156 0.0876 0.34 CD8_CTL L2
ENSG00000111785 RIC8B -460121 sc-eQTL 2.59e-01 -0.0936 0.0826 0.34 CD8_CTL L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 2.46e-01 -0.106 0.0914 0.34 CD8_CTL L2
ENSG00000136026 CKAP4 10221 sc-eQTL 6.53e-01 0.0353 0.0785 0.34 CD8_CTL L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 2.87e-02 0.165 0.0748 0.34 CD8_CTL L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 2.22e-03 0.255 0.0825 0.34 CD8_CTL L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 3.77e-01 -0.0825 0.0933 0.34 CD8_CTL L2
ENSG00000008405 CRY1 -779049 sc-eQTL 7.17e-01 0.025 0.0688 0.34 CD8_Naive L2
ENSG00000013503 POLR3B -43248 sc-eQTL 7.10e-02 -0.15 0.0828 0.34 CD8_Naive L2
ENSG00000111785 RIC8B -460121 sc-eQTL 7.32e-01 0.0305 0.0889 0.34 CD8_Naive L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 3.00e-01 0.0945 0.091 0.34 CD8_Naive L2
ENSG00000136026 CKAP4 10221 sc-eQTL 2.00e-01 -0.0954 0.0742 0.34 CD8_Naive L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 1.70e-02 -0.188 0.0782 0.34 CD8_Naive L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 5.79e-01 -0.0369 0.0664 0.34 CD8_Naive L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 9.11e-01 0.0105 0.0938 0.34 CD8_Naive L2
ENSG00000008405 CRY1 -779049 sc-eQTL 5.38e-02 0.162 0.0835 0.326 CD8_TCM L2
ENSG00000013503 POLR3B -43248 sc-eQTL 3.37e-01 0.0963 0.1 0.326 CD8_TCM L2
ENSG00000111785 RIC8B -460121 sc-eQTL 3.58e-01 -0.0886 0.0961 0.326 CD8_TCM L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 5.97e-01 0.0512 0.0967 0.326 CD8_TCM L2
ENSG00000136026 CKAP4 10221 sc-eQTL 8.21e-01 0.0198 0.0875 0.326 CD8_TCM L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 3.99e-01 -0.0843 0.0998 0.326 CD8_TCM L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 9.30e-01 -0.00739 0.0844 0.326 CD8_TCM L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 3.39e-01 0.0873 0.0912 0.326 CD8_TCM L2
ENSG00000008405 CRY1 -779049 sc-eQTL 7.56e-01 0.0269 0.0864 0.342 CD8_TEM L2
ENSG00000013503 POLR3B -43248 sc-eQTL 3.85e-01 -0.0851 0.0977 0.342 CD8_TEM L2
ENSG00000111785 RIC8B -460121 sc-eQTL 7.53e-01 -0.0295 0.0936 0.342 CD8_TEM L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 7.49e-01 0.0314 0.0981 0.342 CD8_TEM L2
ENSG00000136026 CKAP4 10221 sc-eQTL 6.64e-01 -0.0391 0.09 0.342 CD8_TEM L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 2.29e-01 0.118 0.0981 0.342 CD8_TEM L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 9.57e-01 -0.00505 0.0938 0.342 CD8_TEM L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 2.19e-01 -0.106 0.0863 0.342 CD8_TEM L2
ENSG00000008405 CRY1 -779049 sc-eQTL 9.13e-01 -0.00775 0.071 0.34 MAIT L2
ENSG00000013503 POLR3B -43248 sc-eQTL 1.87e-01 -0.118 0.0891 0.34 MAIT L2
ENSG00000111785 RIC8B -460121 sc-eQTL 7.37e-02 -0.142 0.0788 0.34 MAIT L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 3.35e-01 0.0837 0.0866 0.34 MAIT L2
ENSG00000136026 CKAP4 10221 sc-eQTL 2.30e-01 -0.0962 0.08 0.34 MAIT L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 8.34e-02 -0.162 0.0932 0.34 MAIT L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 4.34e-03 0.231 0.0802 0.34 MAIT L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 3.55e-01 -0.0814 0.0878 0.34 MAIT L2
ENSG00000008405 CRY1 -779049 sc-eQTL 3.51e-01 0.0663 0.0709 0.349 NK_CD56bright L2
ENSG00000013503 POLR3B -43248 sc-eQTL 3.50e-01 0.0839 0.0897 0.349 NK_CD56bright L2
ENSG00000074590 NUAK1 174467 sc-eQTL 2.07e-01 -0.099 0.0781 0.349 NK_CD56bright L2
ENSG00000111785 RIC8B -460121 sc-eQTL 5.34e-01 -0.0606 0.0974 0.349 NK_CD56bright L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 1.57e-01 -0.129 0.0908 0.349 NK_CD56bright L2
ENSG00000136026 CKAP4 10221 sc-eQTL 5.56e-01 0.0434 0.0735 0.349 NK_CD56bright L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 4.42e-01 0.0701 0.091 0.349 NK_CD56bright L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 1.88e-01 0.124 0.0934 0.349 NK_CD56bright L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 2.73e-01 -0.0985 0.0896 0.349 NK_CD56bright L2
ENSG00000008405 CRY1 -779049 sc-eQTL 1.79e-01 -0.0725 0.0538 0.341 NK_CD56dim L2
ENSG00000013503 POLR3B -43248 sc-eQTL 7.62e-01 -0.0246 0.0811 0.341 NK_CD56dim L2
ENSG00000074590 NUAK1 174467 sc-eQTL 8.71e-01 -0.0129 0.0793 0.341 NK_CD56dim L2
ENSG00000111785 RIC8B -460121 sc-eQTL 4.47e-01 -0.0617 0.0811 0.341 NK_CD56dim L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 5.33e-01 0.0503 0.0806 0.341 NK_CD56dim L2
ENSG00000136026 CKAP4 10221 sc-eQTL 1.07e-01 -0.131 0.0809 0.341 NK_CD56dim L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 5.25e-01 -0.0535 0.084 0.341 NK_CD56dim L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 6.91e-03 0.191 0.0701 0.341 NK_CD56dim L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 9.79e-01 -0.00245 0.0939 0.341 NK_CD56dim L2
ENSG00000008405 CRY1 -779049 sc-eQTL 7.37e-01 0.0259 0.077 0.347 NK_HLA L2
ENSG00000013503 POLR3B -43248 sc-eQTL 4.76e-01 -0.0665 0.093 0.347 NK_HLA L2
ENSG00000074590 NUAK1 174467 sc-eQTL 9.96e-01 0.000503 0.0908 0.347 NK_HLA L2
ENSG00000111785 RIC8B -460121 sc-eQTL 5.07e-01 0.0633 0.0953 0.347 NK_HLA L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 3.35e-01 0.093 0.0963 0.347 NK_HLA L2
ENSG00000136026 CKAP4 10221 sc-eQTL 5.37e-01 -0.0518 0.0838 0.347 NK_HLA L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 6.36e-01 -0.0456 0.096 0.347 NK_HLA L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 4.94e-03 0.263 0.0925 0.347 NK_HLA L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 6.09e-01 0.0453 0.0884 0.347 NK_HLA L2
ENSG00000008405 CRY1 -779049 sc-eQTL 6.29e-01 0.0306 0.0633 0.341 NK_cytokine L2
ENSG00000013503 POLR3B -43248 sc-eQTL 8.98e-01 0.0117 0.0908 0.341 NK_cytokine L2
ENSG00000074590 NUAK1 174467 sc-eQTL 9.90e-01 -0.0011 0.0839 0.341 NK_cytokine L2
ENSG00000111785 RIC8B -460121 sc-eQTL 1.31e-01 -0.13 0.0856 0.341 NK_cytokine L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 8.31e-01 -0.0188 0.0879 0.341 NK_cytokine L2
ENSG00000136026 CKAP4 10221 sc-eQTL 2.38e-01 -0.0979 0.0827 0.341 NK_cytokine L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 6.81e-01 -0.0371 0.0902 0.341 NK_cytokine L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 2.10e-02 0.171 0.0733 0.341 NK_cytokine L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 8.28e-01 -0.02 0.0921 0.341 NK_cytokine L2
ENSG00000008405 CRY1 -779049 sc-eQTL 8.09e-01 0.0246 0.102 0.348 PB L2
ENSG00000013503 POLR3B -43248 sc-eQTL 1.60e-01 0.153 0.108 0.348 PB L2
ENSG00000111785 RIC8B -460121 sc-eQTL 1.04e-01 0.158 0.0964 0.348 PB L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 6.25e-01 -0.0449 0.0917 0.348 PB L2
ENSG00000136026 CKAP4 10221 sc-eQTL 2.86e-01 -0.0655 0.061 0.348 PB L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 8.56e-01 0.0143 0.0784 0.348 PB L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 3.47e-02 0.215 0.1 0.348 PB L2
ENSG00000008405 CRY1 -779049 sc-eQTL 6.15e-01 -0.0318 0.063 0.343 Pro_T L2
ENSG00000013503 POLR3B -43248 sc-eQTL 7.18e-01 0.0329 0.091 0.343 Pro_T L2
ENSG00000111785 RIC8B -460121 sc-eQTL 4.19e-01 0.0692 0.0856 0.343 Pro_T L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 3.89e-01 -0.074 0.0858 0.343 Pro_T L2
ENSG00000136026 CKAP4 10221 sc-eQTL 8.67e-01 0.00795 0.0476 0.343 Pro_T L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 9.59e-01 -0.00412 0.0795 0.343 Pro_T L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 1.46e-01 0.106 0.073 0.343 Pro_T L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 8.47e-01 0.0147 0.0759 0.343 Pro_T L2
ENSG00000008405 CRY1 -779049 sc-eQTL 6.28e-01 -0.0382 0.0787 0.34 Treg L2
ENSG00000013503 POLR3B -43248 sc-eQTL 8.00e-01 -0.0237 0.0935 0.34 Treg L2
ENSG00000111785 RIC8B -460121 sc-eQTL 1.19e-02 0.223 0.0878 0.34 Treg L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 5.97e-01 0.051 0.0965 0.34 Treg L2
ENSG00000136026 CKAP4 10221 sc-eQTL 1.56e-01 -0.0977 0.0687 0.34 Treg L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 2.84e-02 -0.195 0.0884 0.34 Treg L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 2.00e-02 0.172 0.0735 0.34 Treg L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 2.88e-01 -0.0934 0.0876 0.34 Treg L2
ENSG00000008405 CRY1 -779049 sc-eQTL 5.48e-01 -0.0537 0.0893 0.346 cDC L2
ENSG00000013503 POLR3B -43248 sc-eQTL 2.00e-01 0.11 0.0856 0.346 cDC L2
ENSG00000111785 RIC8B -460121 sc-eQTL 1.04e-01 -0.147 0.0902 0.346 cDC L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 6.82e-01 -0.0321 0.0781 0.346 cDC L2
ENSG00000136026 CKAP4 10221 sc-eQTL 3.30e-01 -0.0622 0.0637 0.346 cDC L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 5.63e-01 -0.0484 0.0836 0.346 cDC L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 3.00e-01 0.0988 0.095 0.346 cDC L2
ENSG00000008405 CRY1 -779049 sc-eQTL 3.13e-01 0.0776 0.0766 0.34 cMono_IL1B L2
ENSG00000013503 POLR3B -43248 sc-eQTL 1.68e-01 0.12 0.0864 0.34 cMono_IL1B L2
ENSG00000111785 RIC8B -460121 sc-eQTL 1.15e-01 0.124 0.0782 0.34 cMono_IL1B L2
ENSG00000136026 CKAP4 10221 sc-eQTL 1.67e-03 -0.185 0.0581 0.34 cMono_IL1B L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 1.35e-01 0.106 0.0706 0.34 cMono_IL1B L2
ENSG00000008405 CRY1 -779049 sc-eQTL 7.04e-01 -0.034 0.0895 0.34 cMono_S100A L2
ENSG00000013503 POLR3B -43248 sc-eQTL 2.98e-01 -0.0928 0.089 0.34 cMono_S100A L2
ENSG00000111785 RIC8B -460121 sc-eQTL 7.72e-02 0.145 0.0819 0.34 cMono_S100A L2
ENSG00000136026 CKAP4 10221 sc-eQTL 8.94e-02 -0.111 0.0648 0.34 cMono_S100A L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 4.94e-01 -0.0523 0.0764 0.34 cMono_S100A L2
ENSG00000008405 CRY1 -779049 sc-eQTL 7.86e-01 0.0272 0.0999 0.364 gdT L2
ENSG00000013503 POLR3B -43248 sc-eQTL 2.05e-01 -0.133 0.104 0.364 gdT L2
ENSG00000111785 RIC8B -460121 sc-eQTL 3.05e-01 0.109 0.106 0.364 gdT L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 8.21e-01 -0.0258 0.114 0.364 gdT L2
ENSG00000136026 CKAP4 10221 sc-eQTL 4.47e-01 -0.0761 0.0997 0.364 gdT L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 4.25e-01 -0.0833 0.104 0.364 gdT L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 5.42e-01 0.0663 0.108 0.364 gdT L2
ENSG00000260329 AC007541.1 -640997 sc-eQTL 5.90e-01 0.056 0.104 0.364 gdT L2
ENSG00000008405 CRY1 -779049 sc-eQTL 4.41e-01 -0.0693 0.0897 0.347 intMono L2
ENSG00000013503 POLR3B -43248 sc-eQTL 9.68e-01 0.00356 0.0873 0.347 intMono L2
ENSG00000111785 RIC8B -460121 sc-eQTL 9.13e-02 -0.144 0.0847 0.347 intMono L2
ENSG00000136026 CKAP4 10221 sc-eQTL 9.48e-02 -0.148 0.0884 0.347 intMono L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 5.72e-01 0.0565 0.0997 0.347 intMono L2
ENSG00000008405 CRY1 -779049 sc-eQTL 2.23e-01 -0.0774 0.0633 0.348 ncMono L2
ENSG00000013503 POLR3B -43248 sc-eQTL 1.33e-01 0.123 0.0814 0.348 ncMono L2
ENSG00000111785 RIC8B -460121 sc-eQTL 5.97e-01 0.0421 0.0794 0.348 ncMono L2
ENSG00000136026 CKAP4 10221 sc-eQTL 1.90e-01 -0.111 0.0843 0.348 ncMono L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 1.68e-01 0.115 0.0828 0.348 ncMono L2
ENSG00000008405 CRY1 -779049 sc-eQTL 9.16e-01 0.0103 0.0973 0.345 pDC L2
ENSG00000013503 POLR3B -43248 sc-eQTL 7.31e-01 -0.0366 0.106 0.345 pDC L2
ENSG00000111785 RIC8B -460121 sc-eQTL 4.59e-01 -0.0759 0.102 0.345 pDC L2
ENSG00000120832 MTERF2 -672660 sc-eQTL 8.17e-01 -0.0223 0.096 0.345 pDC L2
ENSG00000136026 CKAP4 10221 sc-eQTL 2.00e-01 -0.0873 0.0677 0.345 pDC L2
ENSG00000151135 TMEM263 -641219 sc-eQTL 5.29e-01 -0.0684 0.108 0.345 pDC L2
ENSG00000166046 TCP11L2 12571 sc-eQTL 9.98e-01 -0.000229 0.102 0.345 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -779049 sc-eQTL 3.55e-01 -0.0754 0.0815 0.34 B_Memory LOneK1K
ENSG00000013503 POLR3B -43248 sc-eQTL 4.85e-01 -0.0657 0.0941 0.34 B_Memory LOneK1K
ENSG00000111785 RIC8B -460121 sc-eQTL 7.54e-01 0.0254 0.0808 0.34 B_Memory LOneK1K
ENSG00000120832 MTERF2 -672660 sc-eQTL 4.26e-02 -0.185 0.0906 0.34 B_Memory LOneK1K
ENSG00000136026 CKAP4 10221 sc-eQTL 1.87e-01 -0.0838 0.0634 0.34 B_Memory LOneK1K
ENSG00000151135 TMEM263 -641219 sc-eQTL 9.70e-01 -0.00341 0.0894 0.34 B_Memory LOneK1K
ENSG00000166046 TCP11L2 12571 sc-eQTL 9.04e-02 -0.13 0.0765 0.34 B_Memory LOneK1K
ENSG00000008405 CRY1 -779049 sc-eQTL 4.46e-01 -0.0539 0.0706 0.34 B_Naive LOneK1K
ENSG00000013503 POLR3B -43248 sc-eQTL 7.42e-01 0.0291 0.0885 0.34 B_Naive LOneK1K
ENSG00000111785 RIC8B -460121 sc-eQTL 7.60e-01 -0.0265 0.0866 0.34 B_Naive LOneK1K
ENSG00000120832 MTERF2 -672660 sc-eQTL 6.56e-01 -0.0422 0.0947 0.34 B_Naive LOneK1K
ENSG00000136026 CKAP4 10221 sc-eQTL 2.02e-01 -0.0841 0.0657 0.34 B_Naive LOneK1K
ENSG00000151135 TMEM263 -641219 sc-eQTL 2.82e-01 -0.0961 0.0891 0.34 B_Naive LOneK1K
ENSG00000166046 TCP11L2 12571 sc-eQTL 4.09e-01 -0.0476 0.0575 0.34 B_Naive LOneK1K
ENSG00000008405 CRY1 -779049 sc-eQTL 4.18e-01 0.0601 0.074 0.34 CD14_Mono LOneK1K
ENSG00000013503 POLR3B -43248 sc-eQTL 3.44e-01 0.0776 0.0819 0.34 CD14_Mono LOneK1K
ENSG00000111785 RIC8B -460121 sc-eQTL 9.57e-02 0.126 0.0755 0.34 CD14_Mono LOneK1K
ENSG00000136026 CKAP4 10221 sc-eQTL 3.87e-03 -0.163 0.0559 0.34 CD14_Mono LOneK1K
ENSG00000166046 TCP11L2 12571 sc-eQTL 4.46e-01 0.0463 0.0606 0.34 CD14_Mono LOneK1K
ENSG00000008405 CRY1 -779049 sc-eQTL 4.86e-01 -0.0449 0.0644 0.343 CD16_Mono LOneK1K
ENSG00000013503 POLR3B -43248 sc-eQTL 7.82e-02 0.138 0.0778 0.343 CD16_Mono LOneK1K
ENSG00000111785 RIC8B -460121 sc-eQTL 5.84e-01 -0.0409 0.0746 0.343 CD16_Mono LOneK1K
ENSG00000136026 CKAP4 10221 sc-eQTL 7.76e-02 -0.136 0.0768 0.343 CD16_Mono LOneK1K
ENSG00000166046 TCP11L2 12571 sc-eQTL 3.90e-01 0.069 0.08 0.343 CD16_Mono LOneK1K
ENSG00000008405 CRY1 -779049 sc-eQTL 5.78e-01 -0.0252 0.0453 0.341 NK_CD56dim LOneK1K
ENSG00000013503 POLR3B -43248 sc-eQTL 7.03e-01 -0.0314 0.0823 0.341 NK_CD56dim LOneK1K
ENSG00000074590 NUAK1 174467 sc-eQTL 3.81e-01 -0.0694 0.0791 0.341 NK_CD56dim LOneK1K
ENSG00000111785 RIC8B -460121 sc-eQTL 1.44e-01 -0.111 0.0755 0.341 NK_CD56dim LOneK1K
ENSG00000120832 MTERF2 -672660 sc-eQTL 7.79e-01 0.0221 0.0787 0.341 NK_CD56dim LOneK1K
ENSG00000136026 CKAP4 10221 sc-eQTL 4.52e-02 -0.15 0.0746 0.341 NK_CD56dim LOneK1K
ENSG00000151135 TMEM263 -641219 sc-eQTL 8.01e-01 -0.0202 0.0797 0.341 NK_CD56dim LOneK1K
ENSG00000166046 TCP11L2 12571 sc-eQTL 1.62e-04 0.239 0.0622 0.341 NK_CD56dim LOneK1K
ENSG00000260329 AC007541.1 -640997 sc-eQTL 6.44e-01 -0.043 0.093 0.341 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000013503 POLR3B -43248 eQTL 1.46e-05 -0.125 0.0287 0.00248 0.00578 0.323
ENSG00000074590 NUAK1 174467 eQTL 0.00421 -0.0916 0.0319 0.0 0.0 0.323
ENSG00000136026 CKAP4 10221 eQTL 0.000466 -0.0389 0.0111 0.00129 0.0 0.323
ENSG00000166046 TCP11L2 12571 eQTL 1.64e-53 0.228 0.0139 0.0 0.152 0.323

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000013503 POLR3B -43248 6.33e-05 5.18e-05 8.06e-06 2.18e-05 9.1e-06 2.02e-05 6.15e-05 7.64e-06 5.4e-05 2.78e-05 6.84e-05 2.83e-05 8.26e-05 2.22e-05 1.07e-05 3.44e-05 2.66e-05 4.2e-05 1.17e-05 1.03e-05 2.7e-05 6.18e-05 4.31e-05 1.35e-05 7.41e-05 1.55e-05 2.5e-05 2.26e-05 4.8e-05 3.19e-05 3.31e-05 2.89e-06 4.84e-06 9.73e-06 1.69e-05 8.29e-06 4.63e-06 4.97e-06 7.29e-06 4.15e-06 1.96e-06 5.85e-05 4.96e-06 5.98e-07 3.92e-06 6.66e-06 6.9e-06 2.96e-06 2.19e-06
ENSG00000074590 NUAK1 174467 4.7e-06 4.88e-06 9.72e-07 3.51e-06 1.83e-06 2.21e-06 7.39e-06 1.01e-06 4.64e-06 3.49e-06 5.99e-06 3.37e-06 8.92e-06 2.18e-06 9.99e-07 4.64e-06 1.94e-06 5.21e-06 1.51e-06 2.51e-06 2.85e-06 5.66e-06 4.93e-06 1.36e-06 8.49e-06 2.19e-06 2.72e-06 3.25e-06 4.45e-06 4.31e-06 2.79e-06 9.85e-07 7.23e-07 1.65e-06 2.03e-06 1.18e-06 1.47e-06 9.53e-07 8.12e-07 2.11e-06 4.96e-07 7.11e-06 8.59e-07 3.33e-07 4.18e-07 1.49e-06 1.14e-06 6.58e-07 5.29e-07
ENSG00000136026 CKAP4 10221 0.000127 9.98e-05 2.18e-05 4.88e-05 2.41e-05 4e-05 0.000121 2.51e-05 0.000108 7.33e-05 0.000151 5.88e-05 0.000174 4.73e-05 2.53e-05 7.95e-05 5.49e-05 0.000101 2.83e-05 2.43e-05 7.56e-05 0.000139 9.51e-05 3.62e-05 0.000167 4.14e-05 6.99e-05 5.28e-05 0.000108 5.78e-05 7.13e-05 7.53e-06 1.15e-05 2.53e-05 3.62e-05 2.32e-05 1.06e-05 1.41e-05 1.69e-05 8.86e-06 5.3e-06 0.000119 1.38e-05 2.44e-06 1.07e-05 1.91e-05 1.78e-05 1.25e-05 9.2e-06
ENSG00000166046 TCP11L2 12571 0.000116 8.73e-05 1.87e-05 4.27e-05 2.11e-05 3.69e-05 0.000111 2.2e-05 9.76e-05 6.39e-05 0.000136 5.22e-05 0.00016 4.28e-05 2.21e-05 7.01e-05 4.93e-05 8.96e-05 2.51e-05 2.25e-05 6.51e-05 0.000122 8.36e-05 3.17e-05 0.000153 3.7e-05 6.15e-05 4.74e-05 9.92e-05 5.25e-05 6.4e-05 6.71e-06 1.04e-05 2.25e-05 3.24e-05 2e-05 9.04e-06 1.22e-05 1.47e-05 7.75e-06 4.38e-06 0.000104 1.18e-05 2.33e-06 9.36e-06 1.71e-05 1.65e-05 9.59e-06 7.81e-06