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Genes within 1Mb (chr12:106293946:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -799603 sc-eQTL 9.75e-02 -0.0956 0.0575 0.344 B L1
ENSG00000013503 POLR3B -63802 sc-eQTL 7.25e-01 0.0295 0.0838 0.344 B L1
ENSG00000111785 RIC8B -480675 sc-eQTL 6.97e-01 0.026 0.0666 0.344 B L1
ENSG00000120832 MTERF2 -693214 sc-eQTL 4.33e-01 -0.0724 0.0921 0.344 B L1
ENSG00000136026 CKAP4 -10333 sc-eQTL 9.99e-01 5.68e-05 0.0433 0.344 B L1
ENSG00000151135 TMEM263 -661773 sc-eQTL 2.73e-01 -0.071 0.0647 0.344 B L1
ENSG00000166046 TCP11L2 -7983 sc-eQTL 5.34e-01 -0.0324 0.052 0.344 B L1
ENSG00000008405 CRY1 -799603 sc-eQTL 9.39e-01 -0.00293 0.0383 0.344 CD4T L1
ENSG00000013503 POLR3B -63802 sc-eQTL 4.00e-03 -0.174 0.0598 0.344 CD4T L1
ENSG00000111785 RIC8B -480675 sc-eQTL 7.95e-01 0.0156 0.0601 0.344 CD4T L1
ENSG00000120832 MTERF2 -693214 sc-eQTL 4.80e-01 -0.0521 0.0737 0.344 CD4T L1
ENSG00000136026 CKAP4 -10333 sc-eQTL 2.40e-07 -0.261 0.0489 0.344 CD4T L1
ENSG00000151135 TMEM263 -661773 sc-eQTL 1.84e-01 -0.0775 0.0581 0.344 CD4T L1
ENSG00000166046 TCP11L2 -7983 sc-eQTL 2.80e-07 0.264 0.0498 0.344 CD4T L1
ENSG00000260329 AC007541.1 -661551 sc-eQTL 5.40e-01 -0.0518 0.0843 0.344 CD4T L1
ENSG00000008405 CRY1 -799603 sc-eQTL 5.20e-01 -0.0317 0.0493 0.344 CD8T L1
ENSG00000013503 POLR3B -63802 sc-eQTL 7.98e-01 0.0187 0.0731 0.344 CD8T L1
ENSG00000111785 RIC8B -480675 sc-eQTL 9.68e-02 -0.122 0.0731 0.344 CD8T L1
ENSG00000120832 MTERF2 -693214 sc-eQTL 7.54e-01 0.024 0.0763 0.344 CD8T L1
ENSG00000136026 CKAP4 -10333 sc-eQTL 1.28e-01 -0.0735 0.0481 0.344 CD8T L1
ENSG00000151135 TMEM263 -661773 sc-eQTL 9.84e-01 0.00127 0.063 0.344 CD8T L1
ENSG00000166046 TCP11L2 -7983 sc-eQTL 3.19e-01 0.0427 0.0428 0.344 CD8T L1
ENSG00000260329 AC007541.1 -661551 sc-eQTL 9.39e-01 -0.00704 0.0921 0.344 CD8T L1
ENSG00000008405 CRY1 -799603 sc-eQTL 6.96e-01 0.0308 0.0785 0.347 DC L1
ENSG00000013503 POLR3B -63802 sc-eQTL 6.31e-01 0.0403 0.0837 0.347 DC L1
ENSG00000111785 RIC8B -480675 sc-eQTL 1.67e-01 -0.12 0.0863 0.347 DC L1
ENSG00000120832 MTERF2 -693214 sc-eQTL 9.60e-01 -0.00402 0.0806 0.347 DC L1
ENSG00000136026 CKAP4 -10333 sc-eQTL 4.34e-02 -0.116 0.0571 0.347 DC L1
ENSG00000151135 TMEM263 -661773 sc-eQTL 3.04e-01 -0.0826 0.0802 0.347 DC L1
ENSG00000166046 TCP11L2 -7983 sc-eQTL 7.93e-01 0.0228 0.0866 0.347 DC L1
ENSG00000008405 CRY1 -799603 sc-eQTL 8.37e-01 -0.0126 0.0608 0.344 Mono L1
ENSG00000013503 POLR3B -63802 sc-eQTL 7.28e-02 0.131 0.0725 0.344 Mono L1
ENSG00000111785 RIC8B -480675 sc-eQTL 2.26e-01 0.0848 0.0699 0.344 Mono L1
ENSG00000136026 CKAP4 -10333 sc-eQTL 8.32e-03 -0.137 0.0515 0.344 Mono L1
ENSG00000166046 TCP11L2 -7983 sc-eQTL 5.09e-01 0.0402 0.0607 0.344 Mono L1
ENSG00000008405 CRY1 -799603 sc-eQTL 8.02e-01 -0.0111 0.0443 0.345 NK L1
ENSG00000013503 POLR3B -63802 sc-eQTL 8.81e-01 0.0119 0.0794 0.345 NK L1
ENSG00000074590 NUAK1 153913 sc-eQTL 5.42e-01 -0.0477 0.0781 0.345 NK L1
ENSG00000111785 RIC8B -480675 sc-eQTL 1.39e-01 -0.109 0.0736 0.345 NK L1
ENSG00000120832 MTERF2 -693214 sc-eQTL 8.49e-01 -0.0146 0.0762 0.345 NK L1
ENSG00000136026 CKAP4 -10333 sc-eQTL 2.03e-01 -0.0905 0.0708 0.345 NK L1
ENSG00000151135 TMEM263 -661773 sc-eQTL 5.10e-01 -0.0506 0.0766 0.345 NK L1
ENSG00000166046 TCP11L2 -7983 sc-eQTL 3.22e-04 0.23 0.0627 0.345 NK L1
ENSG00000260329 AC007541.1 -661551 sc-eQTL 6.28e-01 -0.0448 0.0924 0.345 NK L1
ENSG00000008405 CRY1 -799603 sc-eQTL 9.35e-01 -0.0039 0.0479 0.344 Other_T L1
ENSG00000013503 POLR3B -63802 sc-eQTL 3.80e-01 -0.0789 0.0896 0.344 Other_T L1
ENSG00000111785 RIC8B -480675 sc-eQTL 9.65e-01 0.00275 0.063 0.344 Other_T L1
ENSG00000120832 MTERF2 -693214 sc-eQTL 3.58e-01 0.0692 0.0751 0.344 Other_T L1
ENSG00000136026 CKAP4 -10333 sc-eQTL 6.96e-01 -0.022 0.0563 0.344 Other_T L1
ENSG00000151135 TMEM263 -661773 sc-eQTL 7.23e-01 -0.0279 0.0786 0.344 Other_T L1
ENSG00000166046 TCP11L2 -7983 sc-eQTL 3.81e-03 0.198 0.0677 0.344 Other_T L1
ENSG00000260329 AC007541.1 -661551 sc-eQTL 7.55e-01 -0.0265 0.0851 0.344 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -799603 sc-eQTL 2.56e-01 0.106 0.0928 0.334 B_Activated L2
ENSG00000013503 POLR3B -63802 sc-eQTL 5.08e-01 0.0607 0.0915 0.334 B_Activated L2
ENSG00000111785 RIC8B -480675 sc-eQTL 3.72e-01 0.0831 0.0928 0.334 B_Activated L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 2.39e-01 -0.0852 0.072 0.334 B_Activated L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 4.88e-01 -0.0605 0.087 0.334 B_Activated L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 7.33e-01 0.0332 0.0972 0.334 B_Activated L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 6.10e-01 -0.0496 0.097 0.334 B_Activated L2
ENSG00000008405 CRY1 -799603 sc-eQTL 1.41e-01 -0.131 0.089 0.343 B_Intermediate L2
ENSG00000013503 POLR3B -63802 sc-eQTL 9.72e-01 0.00351 0.0988 0.343 B_Intermediate L2
ENSG00000111785 RIC8B -480675 sc-eQTL 2.67e-01 0.0972 0.0874 0.343 B_Intermediate L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 2.44e-02 -0.211 0.093 0.343 B_Intermediate L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 8.28e-01 -0.0159 0.0731 0.343 B_Intermediate L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 8.70e-01 0.0153 0.0936 0.343 B_Intermediate L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 3.80e-01 -0.0746 0.0848 0.343 B_Intermediate L2
ENSG00000008405 CRY1 -799603 sc-eQTL 4.15e-01 0.0738 0.0904 0.343 B_Memory L2
ENSG00000013503 POLR3B -63802 sc-eQTL 2.24e-02 -0.217 0.0944 0.343 B_Memory L2
ENSG00000111785 RIC8B -480675 sc-eQTL 9.78e-02 -0.149 0.0894 0.343 B_Memory L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 6.53e-01 -0.0365 0.0811 0.343 B_Memory L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 9.08e-02 -0.136 0.0802 0.343 B_Memory L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 2.37e-01 -0.108 0.0914 0.343 B_Memory L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 8.51e-01 0.0151 0.0804 0.343 B_Memory L2
ENSG00000008405 CRY1 -799603 sc-eQTL 3.98e-01 -0.0653 0.0771 0.344 B_Naive1 L2
ENSG00000013503 POLR3B -63802 sc-eQTL 4.55e-01 0.0648 0.0866 0.344 B_Naive1 L2
ENSG00000111785 RIC8B -480675 sc-eQTL 2.79e-01 0.0918 0.0845 0.344 B_Naive1 L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 4.33e-01 -0.0729 0.0928 0.344 B_Naive1 L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 2.32e-01 -0.0781 0.0651 0.344 B_Naive1 L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 2.87e-01 -0.0979 0.0917 0.344 B_Naive1 L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 6.15e-01 -0.0323 0.0641 0.344 B_Naive1 L2
ENSG00000008405 CRY1 -799603 sc-eQTL 9.00e-01 0.0117 0.0929 0.341 B_Naive2 L2
ENSG00000013503 POLR3B -63802 sc-eQTL 7.38e-01 -0.0313 0.0936 0.341 B_Naive2 L2
ENSG00000111785 RIC8B -480675 sc-eQTL 2.70e-01 -0.0919 0.083 0.341 B_Naive2 L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 4.52e-01 0.0713 0.0945 0.341 B_Naive2 L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 3.98e-01 -0.0687 0.0811 0.341 B_Naive2 L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 6.61e-01 -0.0414 0.0942 0.341 B_Naive2 L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 8.31e-01 -0.0148 0.0693 0.341 B_Naive2 L2
ENSG00000008405 CRY1 -799603 sc-eQTL 3.03e-01 -0.0769 0.0744 0.334 CD4_CTL L2
ENSG00000013503 POLR3B -63802 sc-eQTL 5.20e-01 0.0584 0.0906 0.334 CD4_CTL L2
ENSG00000111785 RIC8B -480675 sc-eQTL 9.57e-01 0.00518 0.0955 0.334 CD4_CTL L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 7.24e-02 0.163 0.0905 0.334 CD4_CTL L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 7.42e-01 -0.0247 0.0749 0.334 CD4_CTL L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 4.62e-01 -0.0714 0.0968 0.334 CD4_CTL L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 3.81e-02 0.195 0.0935 0.334 CD4_CTL L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 9.40e-01 -0.00611 0.0813 0.334 CD4_CTL L2
ENSG00000008405 CRY1 -799603 sc-eQTL 2.18e-01 0.0553 0.0447 0.344 CD4_Naive L2
ENSG00000013503 POLR3B -63802 sc-eQTL 5.94e-02 -0.128 0.0677 0.344 CD4_Naive L2
ENSG00000111785 RIC8B -480675 sc-eQTL 7.14e-01 0.0237 0.0646 0.344 CD4_Naive L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 6.60e-01 -0.0378 0.0858 0.344 CD4_Naive L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 5.33e-06 -0.261 0.0558 0.344 CD4_Naive L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 3.43e-01 -0.0596 0.0627 0.344 CD4_Naive L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 1.27e-07 0.3 0.0549 0.344 CD4_Naive L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 5.32e-01 -0.0554 0.0886 0.344 CD4_Naive L2
ENSG00000008405 CRY1 -799603 sc-eQTL 8.10e-01 0.0135 0.056 0.344 CD4_TCM L2
ENSG00000013503 POLR3B -63802 sc-eQTL 2.35e-01 -0.0914 0.0768 0.344 CD4_TCM L2
ENSG00000111785 RIC8B -480675 sc-eQTL 6.14e-01 -0.0407 0.0805 0.344 CD4_TCM L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 4.63e-02 -0.184 0.0918 0.344 CD4_TCM L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 2.49e-03 -0.17 0.0554 0.344 CD4_TCM L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 1.09e-02 -0.195 0.0759 0.344 CD4_TCM L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 1.62e-03 0.194 0.0608 0.344 CD4_TCM L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 7.51e-01 0.0297 0.0934 0.344 CD4_TCM L2
ENSG00000008405 CRY1 -799603 sc-eQTL 3.18e-01 0.0779 0.0778 0.344 CD4_TEM L2
ENSG00000013503 POLR3B -63802 sc-eQTL 7.23e-02 -0.175 0.0969 0.344 CD4_TEM L2
ENSG00000111785 RIC8B -480675 sc-eQTL 4.96e-01 0.0609 0.0893 0.344 CD4_TEM L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 4.87e-01 -0.0664 0.0954 0.344 CD4_TEM L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 6.54e-03 -0.207 0.0753 0.344 CD4_TEM L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 6.90e-01 0.0352 0.0879 0.344 CD4_TEM L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 5.23e-03 0.212 0.0753 0.344 CD4_TEM L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 7.19e-01 0.0333 0.0923 0.344 CD4_TEM L2
ENSG00000008405 CRY1 -799603 sc-eQTL 7.46e-01 0.0188 0.0581 0.344 CD8_CTL L2
ENSG00000013503 POLR3B -63802 sc-eQTL 5.93e-02 0.164 0.0867 0.344 CD8_CTL L2
ENSG00000111785 RIC8B -480675 sc-eQTL 1.54e-01 -0.117 0.0818 0.344 CD8_CTL L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 4.09e-01 -0.0751 0.0908 0.344 CD8_CTL L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 9.32e-01 -0.00669 0.0779 0.344 CD8_CTL L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 2.52e-02 0.167 0.0742 0.344 CD8_CTL L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 1.29e-03 0.266 0.0816 0.344 CD8_CTL L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 4.50e-01 -0.0701 0.0926 0.344 CD8_CTL L2
ENSG00000008405 CRY1 -799603 sc-eQTL 6.60e-01 0.0301 0.0683 0.344 CD8_Naive L2
ENSG00000013503 POLR3B -63802 sc-eQTL 4.31e-02 -0.167 0.0821 0.344 CD8_Naive L2
ENSG00000111785 RIC8B -480675 sc-eQTL 9.49e-01 0.00567 0.0883 0.344 CD8_Naive L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 4.77e-01 0.0645 0.0905 0.344 CD8_Naive L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 1.38e-01 -0.109 0.0735 0.344 CD8_Naive L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 6.70e-03 -0.212 0.0774 0.344 CD8_Naive L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 4.98e-01 -0.0447 0.066 0.344 CD8_Naive L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 9.42e-01 0.00675 0.0931 0.344 CD8_Naive L2
ENSG00000008405 CRY1 -799603 sc-eQTL 4.92e-02 0.163 0.0825 0.331 CD8_TCM L2
ENSG00000013503 POLR3B -63802 sc-eQTL 3.58e-01 0.0911 0.0989 0.331 CD8_TCM L2
ENSG00000111785 RIC8B -480675 sc-eQTL 3.76e-01 -0.0844 0.095 0.331 CD8_TCM L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 5.06e-01 0.0636 0.0955 0.331 CD8_TCM L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 9.97e-01 0.00034 0.0865 0.331 CD8_TCM L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 2.18e-01 -0.121 0.0984 0.331 CD8_TCM L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 9.19e-01 0.00853 0.0834 0.331 CD8_TCM L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 4.00e-01 0.076 0.0901 0.331 CD8_TCM L2
ENSG00000008405 CRY1 -799603 sc-eQTL 7.14e-01 0.0316 0.0862 0.342 CD8_TEM L2
ENSG00000013503 POLR3B -63802 sc-eQTL 3.51e-01 -0.0913 0.0975 0.342 CD8_TEM L2
ENSG00000111785 RIC8B -480675 sc-eQTL 8.44e-01 -0.0184 0.0934 0.342 CD8_TEM L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 7.16e-01 0.0357 0.098 0.342 CD8_TEM L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 7.80e-01 -0.0251 0.0899 0.342 CD8_TEM L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 2.06e-01 0.124 0.0979 0.342 CD8_TEM L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 9.69e-01 -0.00363 0.0937 0.342 CD8_TEM L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 2.19e-01 -0.106 0.0862 0.342 CD8_TEM L2
ENSG00000008405 CRY1 -799603 sc-eQTL 7.24e-01 -0.0251 0.0711 0.344 MAIT L2
ENSG00000013503 POLR3B -63802 sc-eQTL 1.73e-01 -0.122 0.0893 0.344 MAIT L2
ENSG00000111785 RIC8B -480675 sc-eQTL 8.90e-02 -0.135 0.079 0.344 MAIT L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 3.36e-01 0.0836 0.0868 0.344 MAIT L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 1.91e-01 -0.105 0.0801 0.344 MAIT L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 1.00e-01 -0.154 0.0935 0.344 MAIT L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 5.23e-03 0.227 0.0804 0.344 MAIT L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 3.04e-01 -0.0905 0.0879 0.344 MAIT L2
ENSG00000008405 CRY1 -799603 sc-eQTL 3.59e-01 0.0645 0.0702 0.353 NK_CD56bright L2
ENSG00000013503 POLR3B -63802 sc-eQTL 3.11e-01 0.0901 0.0887 0.353 NK_CD56bright L2
ENSG00000074590 NUAK1 153913 sc-eQTL 1.11e-01 -0.123 0.0772 0.353 NK_CD56bright L2
ENSG00000111785 RIC8B -480675 sc-eQTL 5.66e-01 -0.0554 0.0964 0.353 NK_CD56bright L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 1.91e-01 -0.118 0.09 0.353 NK_CD56bright L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 6.71e-01 0.0309 0.0728 0.353 NK_CD56bright L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 3.25e-01 0.0888 0.09 0.353 NK_CD56bright L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 1.46e-01 0.135 0.0924 0.353 NK_CD56bright L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 2.74e-01 -0.0973 0.0887 0.353 NK_CD56bright L2
ENSG00000008405 CRY1 -799603 sc-eQTL 2.20e-01 -0.0658 0.0535 0.345 NK_CD56dim L2
ENSG00000013503 POLR3B -63802 sc-eQTL 6.97e-01 -0.0314 0.0806 0.345 NK_CD56dim L2
ENSG00000074590 NUAK1 153913 sc-eQTL 8.00e-01 0.02 0.0788 0.345 NK_CD56dim L2
ENSG00000111785 RIC8B -480675 sc-eQTL 6.43e-01 -0.0375 0.0806 0.345 NK_CD56dim L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 8.19e-01 0.0184 0.0801 0.345 NK_CD56dim L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 2.64e-01 -0.0903 0.0807 0.345 NK_CD56dim L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 2.93e-01 -0.0879 0.0833 0.345 NK_CD56dim L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 8.16e-03 0.186 0.0698 0.345 NK_CD56dim L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 7.90e-01 -0.0249 0.0933 0.345 NK_CD56dim L2
ENSG00000008405 CRY1 -799603 sc-eQTL 5.69e-01 0.0433 0.0759 0.352 NK_HLA L2
ENSG00000013503 POLR3B -63802 sc-eQTL 4.10e-01 -0.0758 0.0917 0.352 NK_HLA L2
ENSG00000074590 NUAK1 153913 sc-eQTL 8.02e-01 0.0225 0.0896 0.352 NK_HLA L2
ENSG00000111785 RIC8B -480675 sc-eQTL 4.74e-01 0.0675 0.094 0.352 NK_HLA L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 3.56e-01 0.088 0.0951 0.352 NK_HLA L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 6.08e-01 -0.0425 0.0827 0.352 NK_HLA L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 6.01e-01 -0.0496 0.0948 0.352 NK_HLA L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 6.43e-03 0.252 0.0914 0.352 NK_HLA L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 5.53e-01 0.0519 0.0872 0.352 NK_HLA L2
ENSG00000008405 CRY1 -799603 sc-eQTL 6.33e-01 0.03 0.0629 0.345 NK_cytokine L2
ENSG00000013503 POLR3B -63802 sc-eQTL 9.98e-01 0.000276 0.0902 0.345 NK_cytokine L2
ENSG00000074590 NUAK1 153913 sc-eQTL 8.36e-01 0.0173 0.0833 0.345 NK_cytokine L2
ENSG00000111785 RIC8B -480675 sc-eQTL 1.30e-01 -0.129 0.0851 0.345 NK_cytokine L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 8.33e-01 -0.0185 0.0873 0.345 NK_cytokine L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 3.25e-01 -0.0812 0.0823 0.345 NK_cytokine L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 4.15e-01 -0.0732 0.0896 0.345 NK_cytokine L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 1.21e-02 0.184 0.0727 0.345 NK_cytokine L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 8.36e-01 -0.019 0.0916 0.345 NK_cytokine L2
ENSG00000008405 CRY1 -799603 sc-eQTL 7.24e-01 0.0354 0.1 0.356 PB L2
ENSG00000013503 POLR3B -63802 sc-eQTL 1.78e-01 0.145 0.107 0.356 PB L2
ENSG00000111785 RIC8B -480675 sc-eQTL 1.05e-01 0.155 0.095 0.356 PB L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 6.97e-01 -0.0353 0.0904 0.356 PB L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 2.76e-01 -0.0658 0.0601 0.356 PB L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 9.06e-01 0.00917 0.0773 0.356 PB L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 4.51e-02 0.201 0.0991 0.356 PB L2
ENSG00000008405 CRY1 -799603 sc-eQTL 8.48e-01 -0.0121 0.0628 0.348 Pro_T L2
ENSG00000013503 POLR3B -63802 sc-eQTL 6.75e-01 0.0381 0.0907 0.348 Pro_T L2
ENSG00000111785 RIC8B -480675 sc-eQTL 4.86e-01 0.0595 0.0853 0.348 Pro_T L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 4.56e-01 -0.0638 0.0855 0.348 Pro_T L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 6.89e-01 0.019 0.0474 0.348 Pro_T L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 9.70e-01 -0.00295 0.0792 0.348 Pro_T L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 1.43e-01 0.107 0.0727 0.348 Pro_T L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 7.13e-01 -0.0278 0.0756 0.348 Pro_T L2
ENSG00000008405 CRY1 -799603 sc-eQTL 6.17e-01 -0.039 0.078 0.344 Treg L2
ENSG00000013503 POLR3B -63802 sc-eQTL 8.58e-01 -0.0166 0.0926 0.344 Treg L2
ENSG00000111785 RIC8B -480675 sc-eQTL 1.05e-02 0.225 0.0869 0.344 Treg L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 7.29e-01 0.0332 0.0957 0.344 Treg L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 1.20e-01 -0.106 0.068 0.344 Treg L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 3.03e-02 -0.191 0.0877 0.344 Treg L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 4.55e-02 0.147 0.0731 0.344 Treg L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 3.30e-01 -0.0848 0.0868 0.344 Treg L2
ENSG00000008405 CRY1 -799603 sc-eQTL 5.29e-01 -0.0559 0.0885 0.351 cDC L2
ENSG00000013503 POLR3B -63802 sc-eQTL 1.66e-01 0.118 0.0848 0.351 cDC L2
ENSG00000111785 RIC8B -480675 sc-eQTL 1.47e-01 -0.131 0.0896 0.351 cDC L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 7.02e-01 -0.0296 0.0775 0.351 cDC L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 3.36e-01 -0.0609 0.0632 0.351 cDC L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 4.85e-01 -0.058 0.0829 0.351 cDC L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 3.20e-01 0.094 0.0942 0.351 cDC L2
ENSG00000008405 CRY1 -799603 sc-eQTL 2.12e-01 0.0952 0.0761 0.344 cMono_IL1B L2
ENSG00000013503 POLR3B -63802 sc-eQTL 1.53e-01 0.123 0.0858 0.344 cMono_IL1B L2
ENSG00000111785 RIC8B -480675 sc-eQTL 7.89e-02 0.137 0.0776 0.344 cMono_IL1B L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 1.34e-03 -0.187 0.0577 0.344 cMono_IL1B L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 1.14e-01 0.111 0.0701 0.344 cMono_IL1B L2
ENSG00000008405 CRY1 -799603 sc-eQTL 7.66e-01 -0.0265 0.089 0.344 cMono_S100A L2
ENSG00000013503 POLR3B -63802 sc-eQTL 3.48e-01 -0.0832 0.0886 0.344 cMono_S100A L2
ENSG00000111785 RIC8B -480675 sc-eQTL 1.13e-01 0.13 0.0816 0.344 cMono_S100A L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 1.21e-01 -0.1 0.0645 0.344 cMono_S100A L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 4.73e-01 -0.0547 0.076 0.344 cMono_S100A L2
ENSG00000008405 CRY1 -799603 sc-eQTL 7.10e-01 0.0371 0.0995 0.367 gdT L2
ENSG00000013503 POLR3B -63802 sc-eQTL 2.28e-01 -0.126 0.104 0.367 gdT L2
ENSG00000111785 RIC8B -480675 sc-eQTL 6.11e-01 0.0539 0.106 0.367 gdT L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 9.04e-01 -0.0137 0.114 0.367 gdT L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 4.81e-01 -0.0702 0.0994 0.367 gdT L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 3.95e-01 -0.0885 0.104 0.367 gdT L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 5.64e-01 0.0626 0.108 0.367 gdT L2
ENSG00000260329 AC007541.1 -661551 sc-eQTL 8.88e-01 0.0146 0.103 0.367 gdT L2
ENSG00000008405 CRY1 -799603 sc-eQTL 3.61e-01 -0.0816 0.0891 0.351 intMono L2
ENSG00000013503 POLR3B -63802 sc-eQTL 8.31e-01 -0.0185 0.0867 0.351 intMono L2
ENSG00000111785 RIC8B -480675 sc-eQTL 6.38e-02 -0.157 0.084 0.351 intMono L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 7.98e-02 -0.154 0.0877 0.351 intMono L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 6.66e-01 0.0428 0.099 0.351 intMono L2
ENSG00000008405 CRY1 -799603 sc-eQTL 2.18e-01 -0.0774 0.0626 0.351 ncMono L2
ENSG00000013503 POLR3B -63802 sc-eQTL 1.84e-01 0.107 0.0806 0.351 ncMono L2
ENSG00000111785 RIC8B -480675 sc-eQTL 4.73e-01 0.0564 0.0785 0.351 ncMono L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 1.73e-01 -0.114 0.0834 0.351 ncMono L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 1.20e-01 0.128 0.0819 0.351 ncMono L2
ENSG00000008405 CRY1 -799603 sc-eQTL 8.77e-01 0.0149 0.096 0.347 pDC L2
ENSG00000013503 POLR3B -63802 sc-eQTL 5.92e-01 -0.0562 0.105 0.347 pDC L2
ENSG00000111785 RIC8B -480675 sc-eQTL 4.41e-01 -0.0779 0.101 0.347 pDC L2
ENSG00000120832 MTERF2 -693214 sc-eQTL 9.24e-01 -0.00907 0.0947 0.347 pDC L2
ENSG00000136026 CKAP4 -10333 sc-eQTL 1.94e-01 -0.0871 0.0668 0.347 pDC L2
ENSG00000151135 TMEM263 -661773 sc-eQTL 6.83e-01 -0.0438 0.107 0.347 pDC L2
ENSG00000166046 TCP11L2 -7983 sc-eQTL 7.64e-01 -0.0303 0.101 0.347 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -799603 sc-eQTL 3.43e-01 -0.0768 0.0809 0.344 B_Memory LOneK1K
ENSG00000013503 POLR3B -63802 sc-eQTL 6.05e-01 -0.0484 0.0935 0.344 B_Memory LOneK1K
ENSG00000111785 RIC8B -480675 sc-eQTL 6.21e-01 0.0397 0.0803 0.344 B_Memory LOneK1K
ENSG00000120832 MTERF2 -693214 sc-eQTL 4.80e-02 -0.179 0.0901 0.344 B_Memory LOneK1K
ENSG00000136026 CKAP4 -10333 sc-eQTL 1.83e-01 -0.0842 0.0629 0.344 B_Memory LOneK1K
ENSG00000151135 TMEM263 -661773 sc-eQTL 7.53e-01 0.0279 0.0888 0.344 B_Memory LOneK1K
ENSG00000166046 TCP11L2 -7983 sc-eQTL 1.68e-01 -0.105 0.0762 0.344 B_Memory LOneK1K
ENSG00000008405 CRY1 -799603 sc-eQTL 4.98e-01 -0.0477 0.0702 0.344 B_Naive LOneK1K
ENSG00000013503 POLR3B -63802 sc-eQTL 8.03e-01 0.022 0.0881 0.344 B_Naive LOneK1K
ENSG00000111785 RIC8B -480675 sc-eQTL 9.23e-01 -0.00834 0.0862 0.344 B_Naive LOneK1K
ENSG00000120832 MTERF2 -693214 sc-eQTL 6.80e-01 -0.0389 0.0942 0.344 B_Naive LOneK1K
ENSG00000136026 CKAP4 -10333 sc-eQTL 2.04e-01 -0.0833 0.0653 0.344 B_Naive LOneK1K
ENSG00000151135 TMEM263 -661773 sc-eQTL 2.55e-01 -0.101 0.0886 0.344 B_Naive LOneK1K
ENSG00000166046 TCP11L2 -7983 sc-eQTL 3.61e-01 -0.0523 0.0571 0.344 B_Naive LOneK1K
ENSG00000008405 CRY1 -799603 sc-eQTL 2.87e-01 0.0785 0.0735 0.344 CD14_Mono LOneK1K
ENSG00000013503 POLR3B -63802 sc-eQTL 2.87e-01 0.0868 0.0814 0.344 CD14_Mono LOneK1K
ENSG00000111785 RIC8B -480675 sc-eQTL 7.60e-02 0.134 0.075 0.344 CD14_Mono LOneK1K
ENSG00000136026 CKAP4 -10333 sc-eQTL 3.79e-03 -0.163 0.0556 0.344 CD14_Mono LOneK1K
ENSG00000166046 TCP11L2 -7983 sc-eQTL 4.39e-01 0.0467 0.0603 0.344 CD14_Mono LOneK1K
ENSG00000008405 CRY1 -799603 sc-eQTL 4.23e-01 -0.0513 0.0639 0.347 CD16_Mono LOneK1K
ENSG00000013503 POLR3B -63802 sc-eQTL 1.51e-01 0.112 0.0774 0.347 CD16_Mono LOneK1K
ENSG00000111785 RIC8B -480675 sc-eQTL 6.77e-01 -0.0309 0.0741 0.347 CD16_Mono LOneK1K
ENSG00000136026 CKAP4 -10333 sc-eQTL 6.71e-02 -0.14 0.0762 0.347 CD16_Mono LOneK1K
ENSG00000166046 TCP11L2 -7983 sc-eQTL 2.61e-01 0.0894 0.0793 0.347 CD16_Mono LOneK1K
ENSG00000008405 CRY1 -799603 sc-eQTL 6.13e-01 -0.0228 0.0451 0.345 NK_CD56dim LOneK1K
ENSG00000013503 POLR3B -63802 sc-eQTL 5.92e-01 -0.044 0.0818 0.345 NK_CD56dim LOneK1K
ENSG00000074590 NUAK1 153913 sc-eQTL 6.35e-01 -0.0375 0.0787 0.345 NK_CD56dim LOneK1K
ENSG00000111785 RIC8B -480675 sc-eQTL 2.17e-01 -0.0931 0.0752 0.345 NK_CD56dim LOneK1K
ENSG00000120832 MTERF2 -693214 sc-eQTL 9.83e-01 0.00169 0.0783 0.345 NK_CD56dim LOneK1K
ENSG00000136026 CKAP4 -10333 sc-eQTL 9.73e-02 -0.124 0.0744 0.345 NK_CD56dim LOneK1K
ENSG00000151135 TMEM263 -661773 sc-eQTL 4.82e-01 -0.0558 0.0792 0.345 NK_CD56dim LOneK1K
ENSG00000166046 TCP11L2 -7983 sc-eQTL 1.57e-04 0.238 0.0619 0.345 NK_CD56dim LOneK1K
ENSG00000260329 AC007541.1 -661551 sc-eQTL 5.05e-01 -0.0618 0.0924 0.345 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000013503 POLR3B -63802 eQTL 1.69e-04 -0.112 0.0296 0.0 0.0 0.329
ENSG00000074590 NUAK1 153913 eQTL 0.00569 -0.0909 0.0328 0.00235 0.0 0.329
ENSG00000136026 CKAP4 -10333 eQTL 0.000266 -0.0416 0.0114 0.00119 0.0 0.329
ENSG00000166046 TCP11L2 -7983 eQTL 1.59e-50 0.228 0.0144 0.0 0.0664 0.329

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000013503 POLR3B -63802 0.00037 2.46e-06 4.93e-07 1.83e-06 6.03e-07 5.29e-06 2.37e-06 3.02e-07 1.89e-06 8.15e-07 1.89e-06 1.32e-06 5.46e-06 9.92e-07 9.32e-07 3.79e-06 1.06e-06 4e-06 8.48e-07 5.62e-07 1.04e-06 3.5e-06 2.75e-06 1.07e-06 4.53e-06 1.17e-06 1.13e-06 1.74e-06 2.45e-06 1.65e-06 9.44e-07 3.03e-07 2.9e-07 5.91e-07 1.02e-06 6.23e-07 6.41e-07 3.59e-07 4.72e-07 2.57e-07 3.03e-07 4.54e-06 1.09e-06 7.3e-09 3.24e-07 3.62e-07 6.27e-07 1.11e-08 5.19e-08
ENSG00000074590 NUAK1 153913 5.53e-06 1.59e-07 6.45e-08 2.05e-07 1.01e-07 4.51e-07 3.33e-07 5.35e-08 1.47e-07 4.94e-08 1.55e-07 8.36e-08 2.74e-07 7.13e-08 6.25e-08 9.6e-08 4.18e-08 3.95e-07 5.19e-08 4.42e-08 1.22e-07 1.39e-07 2.04e-07 3.03e-08 2.86e-07 1.43e-07 1.08e-07 9.74e-08 1.37e-07 1e-07 1.02e-07 3.82e-08 3.3e-08 8.89e-08 3.46e-08 3.14e-08 5.03e-08 9.23e-08 7.52e-08 3.77e-08 3.61e-08 3.27e-07 2.62e-08 2.57e-08 7.91e-08 1.68e-08 1.19e-07 4.5e-09 4.79e-08
ENSG00000136026 CKAP4 -10333 0.000413 1.45e-05 2.47e-06 9.98e-06 2.32e-06 4e-05 2.04e-05 1.54e-06 1.49e-05 6.12e-06 1.54e-05 6.72e-06 3.42e-05 3.86e-06 4.72e-06 1.81e-05 5.45e-06 3.25e-05 2.15e-06 2.79e-06 6.66e-06 2.43e-05 1.24e-05 3.39e-06 2.54e-05 5.48e-06 8.04e-06 5.13e-06 1.56e-05 1e-05 7.65e-06 8.89e-07 1.26e-06 2.74e-06 5.84e-06 2.38e-06 1.64e-06 1.91e-06 1.42e-06 1.72e-06 1.1e-06 2.46e-05 4.93e-06 2.07e-07 6.8e-07 1.81e-06 2.91e-06 6.6e-07 3.26e-07
ENSG00000166046 TCP11L2 -7983 0.00036 2.32e-05 3.01e-06 1.31e-05 3.03e-06 4.16e-05 2.58e-05 2.11e-06 1.84e-05 7.65e-06 2.09e-05 8.37e-06 4.26e-05 4.99e-06 5.31e-06 2.32e-05 7.77e-06 3.86e-05 2.64e-06 2.89e-06 7.77e-06 3.41e-05 1.74e-05 4.52e-06 3.02e-05 7.14e-06 1.02e-05 6.24e-06 1.86e-05 1.28e-05 1.08e-05 9.91e-07 1.19e-06 3.06e-06 7.16e-06 2.81e-06 1.85e-06 2.38e-06 2.19e-06 2.38e-06 1.28e-06 3.61e-05 5.69e-06 1.8e-07 9.15e-07 2.01e-06 3.63e-06 6.35e-07 6.19e-07