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Genes within 1Mb (chr12:106264497:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -829052 sc-eQTL 7.05e-02 0.0971 0.0534 0.457 B L1
ENSG00000013503 POLR3B -93251 sc-eQTL 5.77e-01 -0.0435 0.078 0.457 B L1
ENSG00000111785 RIC8B -510124 sc-eQTL 3.57e-01 0.0571 0.0619 0.457 B L1
ENSG00000120832 MTERF2 -722663 sc-eQTL 4.10e-01 0.0708 0.0857 0.457 B L1
ENSG00000136026 CKAP4 -39782 sc-eQTL 2.15e-01 -0.05 0.0402 0.457 B L1
ENSG00000151135 TMEM263 -691222 sc-eQTL 3.28e-01 0.059 0.0602 0.457 B L1
ENSG00000166046 TCP11L2 -37432 sc-eQTL 7.41e-01 -0.016 0.0484 0.457 B L1
ENSG00000008405 CRY1 -829052 sc-eQTL 1.95e-01 -0.047 0.0362 0.457 CD4T L1
ENSG00000013503 POLR3B -93251 sc-eQTL 1.36e-01 0.086 0.0575 0.457 CD4T L1
ENSG00000111785 RIC8B -510124 sc-eQTL 9.71e-01 -0.00207 0.057 0.457 CD4T L1
ENSG00000120832 MTERF2 -722663 sc-eQTL 5.30e-01 0.044 0.0699 0.457 CD4T L1
ENSG00000136026 CKAP4 -39782 sc-eQTL 2.16e-01 0.0611 0.0492 0.457 CD4T L1
ENSG00000151135 TMEM263 -691222 sc-eQTL 2.37e-01 0.0654 0.0551 0.457 CD4T L1
ENSG00000166046 TCP11L2 -37432 sc-eQTL 3.22e-01 -0.0498 0.0501 0.457 CD4T L1
ENSG00000260329 AC007541.1 -691000 sc-eQTL 7.32e-01 -0.0275 0.08 0.457 CD4T L1
ENSG00000008405 CRY1 -829052 sc-eQTL 6.03e-01 0.0241 0.0462 0.457 CD8T L1
ENSG00000013503 POLR3B -93251 sc-eQTL 9.27e-01 0.00631 0.0686 0.457 CD8T L1
ENSG00000111785 RIC8B -510124 sc-eQTL 6.58e-01 -0.0305 0.069 0.457 CD8T L1
ENSG00000120832 MTERF2 -722663 sc-eQTL 3.09e-01 0.0729 0.0714 0.457 CD8T L1
ENSG00000136026 CKAP4 -39782 sc-eQTL 3.95e-01 0.0386 0.0453 0.457 CD8T L1
ENSG00000151135 TMEM263 -691222 sc-eQTL 2.32e-01 0.0706 0.0589 0.457 CD8T L1
ENSG00000166046 TCP11L2 -37432 sc-eQTL 6.37e-02 -0.0744 0.0399 0.457 CD8T L1
ENSG00000260329 AC007541.1 -691000 sc-eQTL 2.85e-01 -0.0923 0.0861 0.457 CD8T L1
ENSG00000008405 CRY1 -829052 sc-eQTL 4.92e-01 -0.0516 0.0749 0.468 DC L1
ENSG00000013503 POLR3B -93251 sc-eQTL 8.23e-01 0.0179 0.08 0.468 DC L1
ENSG00000111785 RIC8B -510124 sc-eQTL 7.56e-01 0.0258 0.0827 0.468 DC L1
ENSG00000120832 MTERF2 -722663 sc-eQTL 5.22e-01 0.0493 0.0769 0.468 DC L1
ENSG00000136026 CKAP4 -39782 sc-eQTL 5.29e-01 0.0347 0.055 0.468 DC L1
ENSG00000151135 TMEM263 -691222 sc-eQTL 2.08e-01 0.0966 0.0765 0.468 DC L1
ENSG00000166046 TCP11L2 -37432 sc-eQTL 6.52e-01 0.0373 0.0827 0.468 DC L1
ENSG00000008405 CRY1 -829052 sc-eQTL 6.59e-01 -0.0247 0.056 0.457 Mono L1
ENSG00000013503 POLR3B -93251 sc-eQTL 1.07e-03 -0.218 0.0656 0.457 Mono L1
ENSG00000111785 RIC8B -510124 sc-eQTL 4.00e-01 -0.0544 0.0645 0.457 Mono L1
ENSG00000136026 CKAP4 -39782 sc-eQTL 4.69e-01 0.035 0.0482 0.457 Mono L1
ENSG00000166046 TCP11L2 -37432 sc-eQTL 3.56e-01 -0.0517 0.0559 0.457 Mono L1
ENSG00000008405 CRY1 -829052 sc-eQTL 2.41e-01 0.0488 0.0415 0.457 NK L1
ENSG00000013503 POLR3B -93251 sc-eQTL 1.44e-01 0.109 0.0741 0.457 NK L1
ENSG00000074590 NUAK1 124464 sc-eQTL 4.00e-01 0.0617 0.0733 0.457 NK L1
ENSG00000111785 RIC8B -510124 sc-eQTL 9.63e-01 -0.00321 0.0694 0.457 NK L1
ENSG00000120832 MTERF2 -722663 sc-eQTL 9.28e-02 0.12 0.071 0.457 NK L1
ENSG00000136026 CKAP4 -39782 sc-eQTL 2.20e-01 0.0817 0.0664 0.457 NK L1
ENSG00000151135 TMEM263 -691222 sc-eQTL 2.95e-01 0.0753 0.0718 0.457 NK L1
ENSG00000166046 TCP11L2 -37432 sc-eQTL 8.47e-01 0.0117 0.0607 0.457 NK L1
ENSG00000260329 AC007541.1 -691000 sc-eQTL 7.33e-01 -0.0296 0.0867 0.457 NK L1
ENSG00000008405 CRY1 -829052 sc-eQTL 2.23e-02 0.103 0.0446 0.457 Other_T L1
ENSG00000013503 POLR3B -93251 sc-eQTL 7.13e-01 0.0312 0.0846 0.457 Other_T L1
ENSG00000111785 RIC8B -510124 sc-eQTL 8.16e-01 0.0138 0.0594 0.457 Other_T L1
ENSG00000120832 MTERF2 -722663 sc-eQTL 4.11e-02 0.144 0.0703 0.457 Other_T L1
ENSG00000136026 CKAP4 -39782 sc-eQTL 1.49e-01 -0.0765 0.0528 0.457 Other_T L1
ENSG00000151135 TMEM263 -691222 sc-eQTL 3.41e-01 0.0705 0.0739 0.457 Other_T L1
ENSG00000166046 TCP11L2 -37432 sc-eQTL 3.00e-01 -0.0674 0.0649 0.457 Other_T L1
ENSG00000260329 AC007541.1 -691000 sc-eQTL 8.07e-01 0.0196 0.0802 0.457 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -829052 sc-eQTL 5.65e-01 0.0482 0.0837 0.467 B_Activated L2
ENSG00000013503 POLR3B -93251 sc-eQTL 4.79e-01 0.0583 0.0822 0.467 B_Activated L2
ENSG00000111785 RIC8B -510124 sc-eQTL 2.86e-01 0.0891 0.0833 0.467 B_Activated L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 3.95e-01 -0.0554 0.0648 0.467 B_Activated L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 9.69e-01 -0.00309 0.0783 0.467 B_Activated L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 9.98e-01 0.000245 0.0873 0.467 B_Activated L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 8.25e-01 -0.0193 0.0872 0.467 B_Activated L2
ENSG00000008405 CRY1 -829052 sc-eQTL 4.30e-01 0.063 0.0797 0.457 B_Intermediate L2
ENSG00000013503 POLR3B -93251 sc-eQTL 8.96e-01 0.0116 0.0882 0.457 B_Intermediate L2
ENSG00000111785 RIC8B -510124 sc-eQTL 2.22e-01 0.0955 0.078 0.457 B_Intermediate L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 5.16e-01 0.0546 0.084 0.457 B_Intermediate L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 4.43e-01 -0.0501 0.0652 0.457 B_Intermediate L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 7.09e-01 0.0312 0.0835 0.457 B_Intermediate L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 8.02e-01 -0.019 0.0758 0.457 B_Intermediate L2
ENSG00000008405 CRY1 -829052 sc-eQTL 8.85e-01 -0.012 0.0831 0.459 B_Memory L2
ENSG00000013503 POLR3B -93251 sc-eQTL 5.44e-01 -0.0532 0.0876 0.459 B_Memory L2
ENSG00000111785 RIC8B -510124 sc-eQTL 7.94e-01 0.0215 0.0825 0.459 B_Memory L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 1.69e-01 0.102 0.0741 0.459 B_Memory L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 5.61e-01 -0.0431 0.074 0.459 B_Memory L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 9.67e-01 -0.00352 0.0842 0.459 B_Memory L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 9.69e-01 0.00286 0.0738 0.459 B_Memory L2
ENSG00000008405 CRY1 -829052 sc-eQTL 9.74e-01 -0.00239 0.0724 0.457 B_Naive1 L2
ENSG00000013503 POLR3B -93251 sc-eQTL 9.79e-01 -0.00216 0.0813 0.457 B_Naive1 L2
ENSG00000111785 RIC8B -510124 sc-eQTL 1.53e-01 0.113 0.079 0.457 B_Naive1 L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 9.30e-01 0.0077 0.0871 0.457 B_Naive1 L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 3.55e-01 0.0567 0.0611 0.457 B_Naive1 L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 5.23e-01 0.0551 0.0861 0.457 B_Naive1 L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 4.71e-01 0.0433 0.0601 0.457 B_Naive1 L2
ENSG00000008405 CRY1 -829052 sc-eQTL 3.85e-01 0.0752 0.0865 0.457 B_Naive2 L2
ENSG00000013503 POLR3B -93251 sc-eQTL 8.43e-01 -0.0173 0.0873 0.457 B_Naive2 L2
ENSG00000111785 RIC8B -510124 sc-eQTL 3.98e-01 -0.0657 0.0775 0.457 B_Naive2 L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 2.58e-01 0.0999 0.088 0.457 B_Naive2 L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 4.41e-01 -0.0584 0.0757 0.457 B_Naive2 L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 2.74e-01 0.0962 0.0876 0.457 B_Naive2 L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 6.61e-01 -0.0283 0.0646 0.457 B_Naive2 L2
ENSG00000008405 CRY1 -829052 sc-eQTL 3.79e-01 -0.0609 0.0691 0.466 CD4_CTL L2
ENSG00000013503 POLR3B -93251 sc-eQTL 5.96e-01 -0.0447 0.084 0.466 CD4_CTL L2
ENSG00000111785 RIC8B -510124 sc-eQTL 4.52e-01 -0.0666 0.0884 0.466 CD4_CTL L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 5.58e-01 -0.0496 0.0845 0.466 CD4_CTL L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 6.06e-02 0.13 0.0688 0.466 CD4_CTL L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 6.17e-01 -0.0449 0.0898 0.466 CD4_CTL L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 6.58e-01 0.0389 0.0876 0.466 CD4_CTL L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 4.49e-01 -0.0571 0.0753 0.466 CD4_CTL L2
ENSG00000008405 CRY1 -829052 sc-eQTL 2.68e-01 -0.047 0.0423 0.457 CD4_Naive L2
ENSG00000013503 POLR3B -93251 sc-eQTL 3.01e-01 0.0667 0.0643 0.457 CD4_Naive L2
ENSG00000111785 RIC8B -510124 sc-eQTL 1.87e-01 -0.0805 0.0608 0.457 CD4_Naive L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 2.39e-01 0.0955 0.0808 0.457 CD4_Naive L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 4.20e-01 0.0447 0.0553 0.457 CD4_Naive L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 3.94e-01 0.0507 0.0593 0.457 CD4_Naive L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 1.21e-01 -0.0859 0.0552 0.457 CD4_Naive L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 9.74e-01 -0.00272 0.0838 0.457 CD4_Naive L2
ENSG00000008405 CRY1 -829052 sc-eQTL 1.09e-01 -0.0853 0.0529 0.457 CD4_TCM L2
ENSG00000013503 POLR3B -93251 sc-eQTL 6.47e-01 0.0336 0.0732 0.457 CD4_TCM L2
ENSG00000111785 RIC8B -510124 sc-eQTL 2.73e-01 0.0839 0.0763 0.457 CD4_TCM L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 7.43e-01 0.0289 0.0881 0.457 CD4_TCM L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 5.43e-01 -0.0327 0.0538 0.457 CD4_TCM L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 7.43e-02 0.13 0.0727 0.457 CD4_TCM L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 3.12e-01 -0.0598 0.0591 0.457 CD4_TCM L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 8.44e-01 0.0175 0.0888 0.457 CD4_TCM L2
ENSG00000008405 CRY1 -829052 sc-eQTL 1.46e-01 0.105 0.0718 0.457 CD4_TEM L2
ENSG00000013503 POLR3B -93251 sc-eQTL 4.60e-01 0.0668 0.0903 0.457 CD4_TEM L2
ENSG00000111785 RIC8B -510124 sc-eQTL 9.46e-01 0.00556 0.0827 0.457 CD4_TEM L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 5.25e-01 0.0562 0.0883 0.457 CD4_TEM L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 1.63e-01 0.0989 0.0706 0.457 CD4_TEM L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 7.84e-01 -0.0223 0.0814 0.457 CD4_TEM L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 1.37e-01 -0.105 0.0706 0.457 CD4_TEM L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 3.81e-01 0.0749 0.0852 0.457 CD4_TEM L2
ENSG00000008405 CRY1 -829052 sc-eQTL 1.76e-01 0.0745 0.0548 0.457 CD8_CTL L2
ENSG00000013503 POLR3B -93251 sc-eQTL 4.46e-01 -0.0632 0.0828 0.457 CD8_CTL L2
ENSG00000111785 RIC8B -510124 sc-eQTL 3.70e-01 -0.0698 0.0777 0.457 CD8_CTL L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 3.06e-01 0.0882 0.0859 0.457 CD8_CTL L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 3.66e-02 0.154 0.073 0.457 CD8_CTL L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 2.19e-01 -0.0874 0.0709 0.457 CD8_CTL L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 4.85e-01 -0.0553 0.0791 0.457 CD8_CTL L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 2.34e-01 -0.104 0.0875 0.457 CD8_CTL L2
ENSG00000008405 CRY1 -829052 sc-eQTL 7.22e-01 -0.0223 0.0626 0.457 CD8_Naive L2
ENSG00000013503 POLR3B -93251 sc-eQTL 7.46e-01 -0.0246 0.0759 0.457 CD8_Naive L2
ENSG00000111785 RIC8B -510124 sc-eQTL 5.71e-01 -0.0459 0.0809 0.457 CD8_Naive L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 2.16e-01 0.103 0.0827 0.457 CD8_Naive L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 4.87e-01 0.0471 0.0677 0.457 CD8_Naive L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 5.93e-02 0.136 0.0715 0.457 CD8_Naive L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 5.83e-01 -0.0333 0.0605 0.457 CD8_Naive L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 6.53e-01 -0.0384 0.0853 0.457 CD8_Naive L2
ENSG00000008405 CRY1 -829052 sc-eQTL 5.19e-01 -0.049 0.0758 0.472 CD8_TCM L2
ENSG00000013503 POLR3B -93251 sc-eQTL 2.71e-01 0.0993 0.09 0.472 CD8_TCM L2
ENSG00000111785 RIC8B -510124 sc-eQTL 7.94e-01 -0.0227 0.0867 0.472 CD8_TCM L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 3.92e-01 -0.0746 0.0869 0.472 CD8_TCM L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 7.48e-01 -0.0254 0.0787 0.472 CD8_TCM L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 1.98e-01 0.116 0.0895 0.472 CD8_TCM L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 1.72e-02 -0.18 0.0748 0.472 CD8_TCM L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 9.87e-01 -0.00135 0.0822 0.472 CD8_TCM L2
ENSG00000008405 CRY1 -829052 sc-eQTL 7.93e-01 -0.0207 0.0787 0.463 CD8_TEM L2
ENSG00000013503 POLR3B -93251 sc-eQTL 3.09e-01 0.0908 0.089 0.463 CD8_TEM L2
ENSG00000111785 RIC8B -510124 sc-eQTL 3.34e-01 0.0824 0.0851 0.463 CD8_TEM L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 9.80e-01 -0.00227 0.0895 0.463 CD8_TEM L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 7.01e-02 -0.148 0.0814 0.463 CD8_TEM L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 7.80e-01 0.0251 0.0898 0.463 CD8_TEM L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 6.77e-01 -0.0357 0.0855 0.463 CD8_TEM L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 1.94e-01 0.103 0.0787 0.463 CD8_TEM L2
ENSG00000008405 CRY1 -829052 sc-eQTL 1.79e-01 0.089 0.0661 0.463 MAIT L2
ENSG00000013503 POLR3B -93251 sc-eQTL 9.28e-01 0.00755 0.0836 0.463 MAIT L2
ENSG00000111785 RIC8B -510124 sc-eQTL 4.05e-01 0.0618 0.0741 0.463 MAIT L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 8.49e-01 -0.0155 0.0811 0.463 MAIT L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 9.83e-01 0.0016 0.075 0.463 MAIT L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 5.36e-01 0.0543 0.0877 0.463 MAIT L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 4.06e-01 -0.0635 0.0763 0.463 MAIT L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 8.35e-01 -0.0171 0.0822 0.463 MAIT L2
ENSG00000008405 CRY1 -829052 sc-eQTL 4.54e-01 0.0502 0.0668 0.462 NK_CD56bright L2
ENSG00000013503 POLR3B -93251 sc-eQTL 3.06e-01 -0.0866 0.0844 0.462 NK_CD56bright L2
ENSG00000074590 NUAK1 124464 sc-eQTL 5.71e-01 0.0419 0.0738 0.462 NK_CD56bright L2
ENSG00000111785 RIC8B -510124 sc-eQTL 5.33e-01 0.0573 0.0917 0.462 NK_CD56bright L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 2.68e-01 0.0952 0.0857 0.462 NK_CD56bright L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 3.35e-02 0.147 0.0685 0.462 NK_CD56bright L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 9.97e-01 -0.00027 0.0858 0.462 NK_CD56bright L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 5.31e-01 0.0554 0.0883 0.462 NK_CD56bright L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 9.32e-01 -0.00727 0.0846 0.462 NK_CD56bright L2
ENSG00000008405 CRY1 -829052 sc-eQTL 3.43e-03 0.146 0.0493 0.455 NK_CD56dim L2
ENSG00000013503 POLR3B -93251 sc-eQTL 4.09e-01 0.0624 0.0755 0.455 NK_CD56dim L2
ENSG00000074590 NUAK1 124464 sc-eQTL 6.68e-02 0.135 0.0733 0.455 NK_CD56dim L2
ENSG00000111785 RIC8B -510124 sc-eQTL 5.52e-01 0.045 0.0756 0.455 NK_CD56dim L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 9.53e-02 0.125 0.0746 0.455 NK_CD56dim L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 8.03e-01 0.0189 0.0758 0.455 NK_CD56dim L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 8.55e-01 0.0144 0.0783 0.455 NK_CD56dim L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 1.17e-01 0.104 0.0661 0.455 NK_CD56dim L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 6.98e-01 0.034 0.0875 0.455 NK_CD56dim L2
ENSG00000008405 CRY1 -829052 sc-eQTL 4.54e-01 0.0547 0.0729 0.443 NK_HLA L2
ENSG00000013503 POLR3B -93251 sc-eQTL 1.96e-01 0.114 0.0879 0.443 NK_HLA L2
ENSG00000074590 NUAK1 124464 sc-eQTL 7.47e-01 0.0278 0.0861 0.443 NK_HLA L2
ENSG00000111785 RIC8B -510124 sc-eQTL 2.54e-01 -0.103 0.0901 0.443 NK_HLA L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 5.63e-01 -0.0529 0.0914 0.443 NK_HLA L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 1.38e-01 0.118 0.079 0.443 NK_HLA L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 5.09e-01 0.0602 0.091 0.443 NK_HLA L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 5.95e-01 -0.0475 0.0894 0.443 NK_HLA L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 7.92e-01 0.0221 0.0838 0.443 NK_HLA L2
ENSG00000008405 CRY1 -829052 sc-eQTL 5.67e-01 0.0344 0.0599 0.455 NK_cytokine L2
ENSG00000013503 POLR3B -93251 sc-eQTL 5.65e-01 0.0496 0.0859 0.455 NK_cytokine L2
ENSG00000074590 NUAK1 124464 sc-eQTL 5.99e-01 -0.0418 0.0794 0.455 NK_cytokine L2
ENSG00000111785 RIC8B -510124 sc-eQTL 4.66e-01 -0.0595 0.0814 0.455 NK_cytokine L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 2.22e-01 0.102 0.083 0.455 NK_cytokine L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 4.34e-01 0.0615 0.0785 0.455 NK_cytokine L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 1.90e-01 0.112 0.0852 0.455 NK_cytokine L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 5.64e-01 0.0407 0.0703 0.455 NK_cytokine L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 9.10e-01 -0.00982 0.0873 0.455 NK_cytokine L2
ENSG00000008405 CRY1 -829052 sc-eQTL 5.81e-01 0.0545 0.0985 0.463 PB L2
ENSG00000013503 POLR3B -93251 sc-eQTL 9.34e-01 0.00878 0.106 0.463 PB L2
ENSG00000111785 RIC8B -510124 sc-eQTL 9.10e-01 -0.0107 0.0947 0.463 PB L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 8.37e-01 -0.0184 0.0891 0.463 PB L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 3.29e-02 -0.126 0.0583 0.463 PB L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 3.26e-01 -0.0748 0.0758 0.463 PB L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 7.51e-02 0.176 0.098 0.463 PB L2
ENSG00000008405 CRY1 -829052 sc-eQTL 9.94e-01 0.000418 0.0587 0.454 Pro_T L2
ENSG00000013503 POLR3B -93251 sc-eQTL 8.10e-01 0.0204 0.0848 0.454 Pro_T L2
ENSG00000111785 RIC8B -510124 sc-eQTL 2.00e-01 0.102 0.0795 0.454 Pro_T L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 9.02e-01 -0.00987 0.08 0.454 Pro_T L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 7.93e-01 0.0116 0.0443 0.454 Pro_T L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 6.25e-01 -0.0362 0.074 0.454 Pro_T L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 1.23e-01 -0.105 0.0679 0.454 Pro_T L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 2.79e-01 0.0764 0.0705 0.454 Pro_T L2
ENSG00000008405 CRY1 -829052 sc-eQTL 3.92e-01 -0.0622 0.0724 0.457 Treg L2
ENSG00000013503 POLR3B -93251 sc-eQTL 2.96e-01 0.0901 0.0859 0.457 Treg L2
ENSG00000111785 RIC8B -510124 sc-eQTL 9.21e-02 0.138 0.0815 0.457 Treg L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 5.95e-01 -0.0473 0.0889 0.457 Treg L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 6.64e-01 0.0277 0.0636 0.457 Treg L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 3.93e-01 -0.0704 0.0823 0.457 Treg L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 1.17e-01 -0.107 0.0682 0.457 Treg L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 6.35e-01 -0.0384 0.0808 0.457 Treg L2
ENSG00000008405 CRY1 -829052 sc-eQTL 4.10e-01 -0.0708 0.0856 0.478 cDC L2
ENSG00000013503 POLR3B -93251 sc-eQTL 3.93e-01 0.0705 0.0824 0.478 cDC L2
ENSG00000111785 RIC8B -510124 sc-eQTL 7.31e-01 -0.03 0.0872 0.478 cDC L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 8.00e-01 0.019 0.075 0.478 cDC L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 6.86e-01 0.0248 0.0613 0.478 cDC L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 6.87e-01 0.0324 0.0804 0.478 cDC L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 4.91e-01 0.063 0.0913 0.478 cDC L2
ENSG00000008405 CRY1 -829052 sc-eQTL 8.72e-01 -0.0116 0.0719 0.457 cMono_IL1B L2
ENSG00000013503 POLR3B -93251 sc-eQTL 3.21e-02 -0.173 0.0804 0.457 cMono_IL1B L2
ENSG00000111785 RIC8B -510124 sc-eQTL 2.06e-01 -0.093 0.0734 0.457 cMono_IL1B L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 3.28e-01 0.0544 0.0556 0.457 cMono_IL1B L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 8.92e-02 -0.113 0.066 0.457 cMono_IL1B L2
ENSG00000008405 CRY1 -829052 sc-eQTL 4.14e-01 -0.068 0.0831 0.457 cMono_S100A L2
ENSG00000013503 POLR3B -93251 sc-eQTL 1.11e-01 -0.132 0.0825 0.457 cMono_S100A L2
ENSG00000111785 RIC8B -510124 sc-eQTL 4.95e-01 -0.0524 0.0766 0.457 cMono_S100A L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 6.14e-01 0.0306 0.0606 0.457 cMono_S100A L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 3.35e-01 0.0685 0.0709 0.457 cMono_S100A L2
ENSG00000008405 CRY1 -829052 sc-eQTL 6.15e-01 -0.0491 0.0975 0.455 gdT L2
ENSG00000013503 POLR3B -93251 sc-eQTL 1.33e-01 0.153 0.102 0.455 gdT L2
ENSG00000111785 RIC8B -510124 sc-eQTL 2.49e-01 -0.12 0.103 0.455 gdT L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 1.39e-02 0.272 0.109 0.455 gdT L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 5.01e-01 -0.0658 0.0974 0.455 gdT L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 9.41e-01 -0.00757 0.102 0.455 gdT L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 5.08e-01 -0.0703 0.106 0.455 gdT L2
ENSG00000260329 AC007541.1 -691000 sc-eQTL 4.01e-01 0.0851 0.101 0.455 gdT L2
ENSG00000008405 CRY1 -829052 sc-eQTL 8.07e-02 0.147 0.0835 0.46 intMono L2
ENSG00000013503 POLR3B -93251 sc-eQTL 1.99e-01 -0.105 0.0814 0.46 intMono L2
ENSG00000111785 RIC8B -510124 sc-eQTL 1.57e-01 -0.113 0.0795 0.46 intMono L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 4.75e-01 0.0596 0.0832 0.46 intMono L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 2.07e-01 -0.118 0.0931 0.46 intMono L2
ENSG00000008405 CRY1 -829052 sc-eQTL 3.98e-01 -0.0504 0.0596 0.466 ncMono L2
ENSG00000013503 POLR3B -93251 sc-eQTL 1.67e-01 -0.106 0.0765 0.466 ncMono L2
ENSG00000111785 RIC8B -510124 sc-eQTL 9.13e-01 0.00814 0.0746 0.466 ncMono L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 7.42e-01 -0.0262 0.0795 0.466 ncMono L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 5.28e-01 -0.0494 0.0781 0.466 ncMono L2
ENSG00000008405 CRY1 -829052 sc-eQTL 6.97e-01 -0.0342 0.0876 0.469 pDC L2
ENSG00000013503 POLR3B -93251 sc-eQTL 7.68e-01 0.0283 0.0956 0.469 pDC L2
ENSG00000111785 RIC8B -510124 sc-eQTL 7.96e-01 0.0239 0.0923 0.469 pDC L2
ENSG00000120832 MTERF2 -722663 sc-eQTL 5.50e-01 0.0517 0.0863 0.469 pDC L2
ENSG00000136026 CKAP4 -39782 sc-eQTL 1.63e-01 -0.0854 0.0609 0.469 pDC L2
ENSG00000151135 TMEM263 -691222 sc-eQTL 5.99e-01 0.0516 0.0977 0.469 pDC L2
ENSG00000166046 TCP11L2 -37432 sc-eQTL 9.22e-01 0.00904 0.0921 0.469 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000008405 CRY1 -829052 sc-eQTL 5.69e-01 0.0429 0.0753 0.457 B_Memory LOneK1K
ENSG00000013503 POLR3B -93251 sc-eQTL 9.87e-01 0.00142 0.0869 0.457 B_Memory LOneK1K
ENSG00000111785 RIC8B -510124 sc-eQTL 1.63e-01 0.104 0.0743 0.457 B_Memory LOneK1K
ENSG00000120832 MTERF2 -722663 sc-eQTL 3.54e-01 0.0782 0.0843 0.457 B_Memory LOneK1K
ENSG00000136026 CKAP4 -39782 sc-eQTL 5.85e-01 -0.0321 0.0587 0.457 B_Memory LOneK1K
ENSG00000151135 TMEM263 -691222 sc-eQTL 5.83e-01 0.0453 0.0824 0.457 B_Memory LOneK1K
ENSG00000166046 TCP11L2 -37432 sc-eQTL 5.13e-01 -0.0465 0.071 0.457 B_Memory LOneK1K
ENSG00000008405 CRY1 -829052 sc-eQTL 4.47e-01 0.0503 0.066 0.457 B_Naive LOneK1K
ENSG00000013503 POLR3B -93251 sc-eQTL 9.59e-01 -0.00428 0.0828 0.457 B_Naive LOneK1K
ENSG00000111785 RIC8B -510124 sc-eQTL 6.36e-01 0.0384 0.081 0.457 B_Naive LOneK1K
ENSG00000120832 MTERF2 -722663 sc-eQTL 1.52e-01 0.127 0.0882 0.457 B_Naive LOneK1K
ENSG00000136026 CKAP4 -39782 sc-eQTL 8.76e-01 -0.00966 0.0617 0.457 B_Naive LOneK1K
ENSG00000151135 TMEM263 -691222 sc-eQTL 2.45e-01 0.097 0.0833 0.457 B_Naive LOneK1K
ENSG00000166046 TCP11L2 -37432 sc-eQTL 7.55e-01 -0.0168 0.0538 0.457 B_Naive LOneK1K
ENSG00000008405 CRY1 -829052 sc-eQTL 6.07e-01 -0.0354 0.0687 0.457 CD14_Mono LOneK1K
ENSG00000013503 POLR3B -93251 sc-eQTL 2.37e-02 -0.171 0.0751 0.457 CD14_Mono LOneK1K
ENSG00000111785 RIC8B -510124 sc-eQTL 5.20e-01 -0.0454 0.0703 0.457 CD14_Mono LOneK1K
ENSG00000136026 CKAP4 -39782 sc-eQTL 4.03e-01 0.0442 0.0528 0.457 CD14_Mono LOneK1K
ENSG00000166046 TCP11L2 -37432 sc-eQTL 3.02e-01 -0.0581 0.0561 0.457 CD14_Mono LOneK1K
ENSG00000008405 CRY1 -829052 sc-eQTL 8.44e-01 0.0118 0.0597 0.459 CD16_Mono LOneK1K
ENSG00000013503 POLR3B -93251 sc-eQTL 3.22e-02 -0.155 0.0718 0.459 CD16_Mono LOneK1K
ENSG00000111785 RIC8B -510124 sc-eQTL 2.77e-01 -0.0752 0.069 0.459 CD16_Mono LOneK1K
ENSG00000136026 CKAP4 -39782 sc-eQTL 5.36e-01 0.0444 0.0716 0.459 CD16_Mono LOneK1K
ENSG00000166046 TCP11L2 -37432 sc-eQTL 2.83e-01 -0.0797 0.074 0.459 CD16_Mono LOneK1K
ENSG00000008405 CRY1 -829052 sc-eQTL 2.21e-01 0.0521 0.0424 0.455 NK_CD56dim LOneK1K
ENSG00000013503 POLR3B -93251 sc-eQTL 1.38e-01 0.114 0.0768 0.455 NK_CD56dim LOneK1K
ENSG00000074590 NUAK1 124464 sc-eQTL 2.40e-01 0.0873 0.0741 0.455 NK_CD56dim LOneK1K
ENSG00000111785 RIC8B -510124 sc-eQTL 7.31e-01 -0.0245 0.0712 0.455 NK_CD56dim LOneK1K
ENSG00000120832 MTERF2 -722663 sc-eQTL 1.18e-01 0.115 0.0734 0.455 NK_CD56dim LOneK1K
ENSG00000136026 CKAP4 -39782 sc-eQTL 7.36e-01 0.0238 0.0706 0.455 NK_CD56dim LOneK1K
ENSG00000151135 TMEM263 -691222 sc-eQTL 1.41e-01 0.11 0.0744 0.455 NK_CD56dim LOneK1K
ENSG00000166046 TCP11L2 -37432 sc-eQTL 4.75e-01 0.0432 0.0603 0.455 NK_CD56dim LOneK1K
ENSG00000260329 AC007541.1 -691000 sc-eQTL 5.68e-01 0.0499 0.0872 0.455 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136026 CKAP4 -39782 pQTL 0.00187 -0.0412 0.0132 0.0 0.0 0.485
ENSG00000136026 CKAP4 -39782 eQTL 0.00667 0.0286 0.0105 0.0 0.0 0.493
ENSG00000277715 AC079174.2 13738 eQTL 0.0319 0.0352 0.0164 0.0 0.0 0.493

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000136026 CKAP4 -39782 2.81e-05 1.25e-05 1.99e-06 6.16e-06 2.36e-06 6.64e-06 1.37e-05 2.16e-06 1.07e-05 5.92e-06 1.5e-05 5.88e-06 2.07e-05 4.48e-06 3.8e-06 7.72e-06 5.57e-06 1.04e-05 3.04e-06 2.85e-06 6.5e-06 1.2e-05 1.02e-05 3.27e-06 1.83e-05 4.62e-06 6.28e-06 4.49e-06 1.29e-05 1.02e-05 7.81e-06 9.97e-07 1.27e-06 3.37e-06 4.76e-06 2.3e-06 1.71e-06 1.9e-06 2.12e-06 9.42e-07 7.59e-07 1.73e-05 2.35e-06 1.59e-07 7.73e-07 1.68e-06 1.79e-06 7.83e-07 4.67e-07
ENSG00000258355 \N 17541 5.24e-05 2.16e-05 4.28e-06 1.04e-05 3.06e-06 1.34e-05 2.7e-05 2.48e-06 1.92e-05 9.53e-06 2.28e-05 8.18e-06 3.48e-05 7.86e-06 5.22e-06 1.18e-05 8.8e-06 1.84e-05 5.37e-06 4.04e-06 9.45e-06 2.28e-05 1.95e-05 5.59e-06 2.77e-05 5.6e-06 8.03e-06 7.68e-06 2.1e-05 1.67e-05 1.29e-05 1.18e-06 1.55e-06 4.87e-06 6.46e-06 3.74e-06 1.76e-06 2.39e-06 2.84e-06 2.18e-06 1.01e-06 2.67e-05 2.99e-06 1.66e-07 1.9e-06 2.35e-06 3.24e-06 9.54e-07 6.26e-07
ENSG00000277715 AC079174.2 13738 5.86e-05 2.37e-05 5.06e-06 1.17e-05 3.32e-06 1.51e-05 3.16e-05 2.9e-06 2.17e-05 1.02e-05 2.51e-05 8.87e-06 3.74e-05 8.94e-06 5.36e-06 1.34e-05 1e-05 2.06e-05 6e-06 4.19e-06 1.04e-05 2.57e-05 2.24e-05 6.4e-06 2.97e-05 5.9e-06 8.52e-06 8.11e-06 2.39e-05 1.85e-05 1.33e-05 1.34e-06 1.88e-06 5.42e-06 7.03e-06 3.82e-06 1.91e-06 2.67e-06 3.24e-06 2.49e-06 1.14e-06 2.9e-05 3.24e-06 1.5e-07 1.98e-06 2.45e-06 3.33e-06 1.24e-06 8.91e-07