Genes within 1Mb (chr12:105249335:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136044 APPL2 13132 pQTL 3.27e-09 0.0903 0.0151 0.0 0.0 0.107
ENSG00000136044 APPL2 13132 eQTL 2.88e-04 0.106 0.0292 0.0 0.0 0.108
ENSG00000136051 WASHC4 142011 eQTL 8.63e-06 0.0666 0.0149 0.0 0.0 0.108
ENSG00000136052 SLC41A2 290591 eQTL 9.09e-18 0.473 0.0541 0.0 0.0 0.108
ENSG00000151131 C12orf45 263019 eQTL 1.40e-02 -0.0624 0.0253 0.0 0.0 0.108
ENSG00000171310 CHST11 794040 eQTL 3.70e-04 0.0816 0.0228 0.0 0.0 0.108
ENSG00000279176 AC079316.2 697262 eQTL 6.63e-03 0.107 0.0394 0.0 0.0 0.108


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000136051 WASHC4 142011 4.59e-06 4.7e-06 6.93e-07 2.63e-06 7.76e-07 1.09e-06 3.08e-06 1.03e-06 4.15e-06 1.83e-06 4.33e-06 3.04e-06 7.67e-06 2.01e-06 9.69e-07 2.99e-06 1.82e-06 2.74e-06 1.42e-06 8.79e-07 1.92e-06 3.92e-06 3.4e-06 1.71e-06 5.89e-06 1.21e-06 2.27e-06 1.45e-06 4.1e-06 4.02e-06 2.32e-06 5.93e-07 6.23e-07 1.82e-06 2.04e-06 9.44e-07 9.82e-07 3.79e-07 1.06e-06 4e-07 2.4e-07 5.79e-06 3.63e-07 1.86e-07 3.62e-07 3.52e-07 8.74e-07 2.4e-07 1.58e-07
ENSG00000136052 SLC41A2 290591 1.42e-06 1.19e-06 3.58e-07 1.3e-06 2.53e-07 5.63e-07 1.55e-06 3.54e-07 1.4e-06 4.66e-07 1.88e-06 7.37e-07 2.53e-06 2.87e-07 5.79e-07 9.78e-07 8.25e-07 7.89e-07 7.25e-07 6.55e-07 4.99e-07 1.6e-06 8.98e-07 5.77e-07 2.49e-06 4.33e-07 9.15e-07 7.81e-07 1.31e-06 1.21e-06 7.64e-07 1.89e-07 2.29e-07 6.68e-07 5.23e-07 4.36e-07 6.1e-07 1.47e-07 4.82e-07 3.12e-07 2.85e-07 1.58e-06 1.37e-07 4.16e-08 1.88e-07 1.14e-07 2.34e-07 8.31e-08 9.32e-08
ENSG00000171310 CHST11 794040 3.02e-07 1.5e-07 5.14e-08 2.09e-07 9.25e-08 9.48e-08 1.81e-07 5.48e-08 1.5e-07 5.67e-08 1.67e-07 1.05e-07 1.95e-07 7.95e-08 6.12e-08 7.97e-08 4.12e-08 1.51e-07 5.97e-08 4.78e-08 1.21e-07 1.26e-07 1.5e-07 3.17e-08 1.85e-07 1.25e-07 1.1e-07 9.74e-08 1.22e-07 1.07e-07 1.07e-07 2.96e-08 3.56e-08 8.7e-08 3.63e-08 2.69e-08 5.7e-08 9.26e-08 6.76e-08 4.55e-08 5e-08 1.48e-07 5.39e-08 1.25e-08 4.7e-08 1.84e-08 1.19e-07 1.88e-09 4.9e-08