Genes within 1Mb (chr12:104912068:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000136044 APPL2 -324135 pQTL 1.27e-01 0.0195 0.0128 0.00144 0.0 0.177
ENSG00000136044 APPL2 -324135 eQTL 9.15e-03 -0.0629 0.0241 0.0 0.0 0.184
ENSG00000136051 WASHC4 -195256 eQTL 1.71e-07 0.0642 0.0122 0.00104 0.0 0.184
ENSG00000136052 SLC41A2 -46676 eQTL 3.46e-79 0.796 0.0384 0.0 0.0 0.184
ENSG00000171310 CHST11 456773 eQTL 2.56e-37 0.232 0.0174 0.0 0.0 0.184
ENSG00000235162 C12orf75 -323222 eQTL 3.30e-02 -0.0482 0.0226 0.0 0.0 0.184
ENSG00000279176 AC079316.2 359995 eQTL 2.63e-04 0.118 0.0323 0.00435 0.00434 0.184


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000136044 APPL2 -324135 1.24e-06 9.31e-07 2.79e-07 7e-07 2.66e-07 4.63e-07 1.13e-06 3.52e-07 1.2e-06 4.03e-07 1.36e-06 6.03e-07 1.68e-06 2.59e-07 4.32e-07 8.11e-07 7.7e-07 5.69e-07 5.34e-07 6.61e-07 3.91e-07 1.17e-06 7.95e-07 5.75e-07 1.95e-06 3.06e-07 7.27e-07 7.2e-07 9.39e-07 1.03e-06 5.66e-07 1.85e-07 1.81e-07 4.29e-07 4.4e-07 4.74e-07 4.21e-07 1.61e-07 2.17e-07 1.16e-07 2.44e-07 1.51e-06 5.73e-08 8.96e-08 1.88e-07 1.14e-07 1.6e-07 8.73e-08 9.59e-08
ENSG00000136051 WASHC4 -195256 2.78e-06 2.52e-06 3.08e-07 1.71e-06 4.76e-07 7.82e-07 1.61e-06 6.3e-07 1.89e-06 1e-06 2.48e-06 1.34e-06 3.48e-06 1.29e-06 5.7e-07 1.63e-06 9.63e-07 1.97e-06 7.68e-07 1.14e-06 9.06e-07 2.82e-06 2.11e-06 1.02e-06 3.5e-06 1.29e-06 1.31e-06 1.63e-06 1.87e-06 1.67e-06 1.71e-06 3.22e-07 4.76e-07 1.16e-06 1.13e-06 9.27e-07 7.71e-07 4.41e-07 9.49e-07 3.54e-07 2.88e-07 3.37e-06 4.86e-07 1.85e-07 2.94e-07 3.36e-07 4.62e-07 2.24e-07 2.1e-07
ENSG00000136052 SLC41A2 -46676 1.08e-05 1.24e-05 2.36e-06 7.29e-06 2.37e-06 5.13e-06 1.38e-05 2.27e-06 1.2e-05 6.11e-06 1.6e-05 6.62e-06 2.02e-05 4.27e-06 3.66e-06 7.85e-06 6.23e-06 9.82e-06 3.32e-06 3.13e-06 6.62e-06 1.2e-05 1.08e-05 3.81e-06 2.02e-05 4.53e-06 7.13e-06 5.26e-06 1.29e-05 1.08e-05 8.13e-06 1.06e-06 1.22e-06 3.6e-06 5.44e-06 2.77e-06 1.79e-06 2.03e-06 2.11e-06 1.26e-06 9.49e-07 1.65e-05 1.82e-06 2.27e-07 1.07e-06 2.08e-06 1.8e-06 6.88e-07 5.35e-07
ENSG00000171310 CHST11 456773 8.63e-07 5.6e-07 1.04e-07 3.99e-07 1.12e-07 2.09e-07 5.28e-07 1.42e-07 4.3e-07 2.57e-07 6.88e-07 3.91e-07 7.19e-07 1.34e-07 2.15e-07 2.55e-07 2.53e-07 3.82e-07 2.13e-07 1.71e-07 1.92e-07 3.71e-07 3.08e-07 1.71e-07 7.94e-07 2.39e-07 2.94e-07 2.73e-07 3.43e-07 4.27e-07 2.83e-07 5.45e-08 5.19e-08 1.36e-07 3.36e-07 1.46e-07 1.06e-07 7.53e-08 6.29e-08 2.65e-08 7.48e-08 5.29e-07 4.18e-08 1.24e-08 1.45e-07 1.44e-08 8.24e-08 2.25e-08 6.06e-08
ENSG00000279176 AC079316.2 359995 1.22e-06 9.37e-07 2.52e-07 3.65e-07 1.96e-07 3.36e-07 7.96e-07 2.88e-07 9.89e-07 3.46e-07 1.22e-06 5.73e-07 1.37e-06 2.19e-07 4.05e-07 5.81e-07 6.83e-07 5.2e-07 3.98e-07 4.32e-07 2.57e-07 7.21e-07 5.66e-07 4.38e-07 1.72e-06 2.48e-07 6.23e-07 5.27e-07 6.85e-07 8.43e-07 4.54e-07 7.28e-08 1.18e-07 2.46e-07 3.21e-07 3.36e-07 2.83e-07 1.15e-07 1.24e-07 3.01e-08 1.45e-07 1.19e-06 5.65e-08 6.41e-08 1.72e-07 7.43e-08 1.58e-07 8.88e-08 8e-08