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Genes within 1Mb (chr12:101698490:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -783254 sc-eQTL 4.60e-01 0.0315 0.0425 0.763 B L1
ENSG00000075188 NUP37 -421630 sc-eQTL 8.66e-01 0.0125 0.0741 0.763 B L1
ENSG00000111666 CHPT1 1543 sc-eQTL 4.30e-02 0.0908 0.0446 0.763 B L1
ENSG00000111670 GNPTAB -132469 sc-eQTL 6.36e-02 -0.12 0.0646 0.763 B L1
ENSG00000120800 UTP20 418385 sc-eQTL 1.70e-01 -0.101 0.0737 0.763 B L1
ENSG00000120805 ARL1 290718 sc-eQTL 5.28e-01 0.0402 0.0636 0.763 B L1
ENSG00000120860 WASHC3 -363659 sc-eQTL 2.79e-01 0.0552 0.0508 0.763 B L1
ENSG00000136048 DRAM1 -179090 sc-eQTL 2.47e-02 -0.129 0.0571 0.763 B L1
ENSG00000139351 SYCP3 -40982 sc-eQTL 3.02e-02 0.198 0.0908 0.763 B L1
ENSG00000185480 PARPBP -421695 sc-eQTL 8.94e-01 0.0117 0.0879 0.763 B L1
ENSG00000281344 HELLPAR -499095 sc-eQTL 3.95e-01 -0.0698 0.0819 0.763 B L1
ENSG00000075188 NUP37 -421630 sc-eQTL 1.29e-01 0.101 0.0665 0.763 CD4T L1
ENSG00000111666 CHPT1 1543 sc-eQTL 2.84e-13 0.62 0.0795 0.763 CD4T L1
ENSG00000111670 GNPTAB -132469 sc-eQTL 2.89e-03 -0.185 0.0613 0.763 CD4T L1
ENSG00000120800 UTP20 418385 sc-eQTL 8.36e-01 0.0144 0.0692 0.763 CD4T L1
ENSG00000120805 ARL1 290718 sc-eQTL 2.48e-01 0.0782 0.0675 0.763 CD4T L1
ENSG00000120860 WASHC3 -363659 sc-eQTL 2.77e-01 -0.0515 0.0472 0.763 CD4T L1
ENSG00000075188 NUP37 -421630 sc-eQTL 7.02e-01 -0.0318 0.0831 0.763 CD8T L1
ENSG00000111666 CHPT1 1543 sc-eQTL 2.42e-11 0.572 0.081 0.763 CD8T L1
ENSG00000111670 GNPTAB -132469 sc-eQTL 2.24e-02 -0.134 0.0584 0.763 CD8T L1
ENSG00000120800 UTP20 418385 sc-eQTL 1.47e-01 0.108 0.0743 0.763 CD8T L1
ENSG00000120805 ARL1 290718 sc-eQTL 3.95e-01 0.0701 0.0822 0.763 CD8T L1
ENSG00000120860 WASHC3 -363659 sc-eQTL 7.37e-01 -0.0197 0.0585 0.763 CD8T L1
ENSG00000136048 DRAM1 -179090 sc-eQTL 7.57e-01 -0.026 0.0838 0.763 CD8T L1
ENSG00000075188 NUP37 -421630 sc-eQTL 2.02e-01 -0.12 0.094 0.766 DC L1
ENSG00000111666 CHPT1 1543 sc-eQTL 2.13e-01 0.107 0.0859 0.766 DC L1
ENSG00000111670 GNPTAB -132469 sc-eQTL 2.53e-02 -0.211 0.0937 0.766 DC L1
ENSG00000120800 UTP20 418385 sc-eQTL 7.67e-03 -0.269 0.0999 0.766 DC L1
ENSG00000120805 ARL1 290718 sc-eQTL 2.49e-01 0.121 0.105 0.766 DC L1
ENSG00000120860 WASHC3 -363659 sc-eQTL 5.20e-01 -0.0583 0.0905 0.766 DC L1
ENSG00000136048 DRAM1 -179090 sc-eQTL 6.39e-01 0.0351 0.0747 0.766 DC L1
ENSG00000185480 PARPBP -421695 sc-eQTL 6.81e-01 -0.0406 0.0985 0.766 DC L1
ENSG00000075188 NUP37 -421630 sc-eQTL 1.09e-01 0.125 0.0778 0.763 Mono L1
ENSG00000111666 CHPT1 1543 sc-eQTL 5.16e-01 0.0431 0.0662 0.763 Mono L1
ENSG00000111670 GNPTAB -132469 sc-eQTL 9.63e-01 0.00383 0.0831 0.763 Mono L1
ENSG00000120800 UTP20 418385 sc-eQTL 9.67e-01 0.0039 0.0927 0.763 Mono L1
ENSG00000120805 ARL1 290718 sc-eQTL 5.20e-01 -0.0549 0.0852 0.763 Mono L1
ENSG00000120860 WASHC3 -363659 sc-eQTL 3.05e-01 -0.0769 0.0749 0.763 Mono L1
ENSG00000136048 DRAM1 -179090 sc-eQTL 3.64e-04 -0.215 0.0593 0.763 Mono L1
ENSG00000075188 NUP37 -421630 sc-eQTL 6.83e-01 0.0345 0.0844 0.764 NK L1
ENSG00000111666 CHPT1 1543 sc-eQTL 1.61e-13 0.543 0.0688 0.764 NK L1
ENSG00000111670 GNPTAB -132469 sc-eQTL 1.20e-02 -0.142 0.056 0.764 NK L1
ENSG00000120800 UTP20 418385 sc-eQTL 8.29e-01 0.0197 0.0914 0.764 NK L1
ENSG00000120805 ARL1 290718 sc-eQTL 9.12e-01 0.00927 0.084 0.764 NK L1
ENSG00000120860 WASHC3 -363659 sc-eQTL 1.46e-01 0.092 0.063 0.764 NK L1
ENSG00000136048 DRAM1 -179090 sc-eQTL 7.55e-02 -0.16 0.0895 0.764 NK L1
ENSG00000185480 PARPBP -421695 sc-eQTL 8.34e-01 0.0221 0.106 0.764 NK L1
ENSG00000017427 IGF1 -783254 sc-eQTL 6.36e-01 0.0154 0.0325 0.763 Other_T L1
ENSG00000075188 NUP37 -421630 sc-eQTL 2.23e-01 0.0755 0.0618 0.763 Other_T L1
ENSG00000111666 CHPT1 1543 sc-eQTL 6.23e-07 0.439 0.0854 0.763 Other_T L1
ENSG00000111670 GNPTAB -132469 sc-eQTL 3.79e-03 -0.188 0.0641 0.763 Other_T L1
ENSG00000120800 UTP20 418385 sc-eQTL 3.69e-01 0.0917 0.102 0.763 Other_T L1
ENSG00000120805 ARL1 290718 sc-eQTL 7.37e-01 -0.0251 0.0744 0.763 Other_T L1
ENSG00000120860 WASHC3 -363659 sc-eQTL 3.73e-02 -0.137 0.0654 0.763 Other_T L1
ENSG00000136048 DRAM1 -179090 sc-eQTL 3.21e-01 -0.0787 0.0791 0.763 Other_T L1
ENSG00000185480 PARPBP -421695 sc-eQTL 7.15e-01 0.0241 0.0661 0.763 Other_T L1
ENSG00000281344 HELLPAR -499095 sc-eQTL 3.87e-01 0.0664 0.0767 0.763 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -783254 sc-eQTL 3.68e-01 0.0184 0.0203 0.763 B_Activated L2
ENSG00000075188 NUP37 -421630 sc-eQTL 5.39e-01 0.0651 0.106 0.763 B_Activated L2
ENSG00000111666 CHPT1 1543 sc-eQTL 9.04e-01 -0.00944 0.0782 0.763 B_Activated L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 1.54e-01 -0.158 0.11 0.763 B_Activated L2
ENSG00000120800 UTP20 418385 sc-eQTL 3.68e-01 0.0968 0.107 0.763 B_Activated L2
ENSG00000120805 ARL1 290718 sc-eQTL 1.68e-01 0.153 0.11 0.763 B_Activated L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 7.09e-01 -0.0394 0.106 0.763 B_Activated L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 2.13e-01 -0.132 0.106 0.763 B_Activated L2
ENSG00000139351 SYCP3 -40982 sc-eQTL 8.35e-01 -0.0182 0.0872 0.763 B_Activated L2
ENSG00000185480 PARPBP -421695 sc-eQTL 1.51e-02 0.212 0.0863 0.763 B_Activated L2
ENSG00000281344 HELLPAR -499095 sc-eQTL 1.98e-01 -0.106 0.082 0.763 B_Activated L2
ENSG00000017427 IGF1 -783254 sc-eQTL 6.77e-01 0.0176 0.0421 0.764 B_Intermediate L2
ENSG00000075188 NUP37 -421630 sc-eQTL 8.26e-01 -0.023 0.105 0.764 B_Intermediate L2
ENSG00000111666 CHPT1 1543 sc-eQTL 5.82e-01 0.031 0.0562 0.764 B_Intermediate L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 7.29e-02 -0.149 0.0825 0.764 B_Intermediate L2
ENSG00000120800 UTP20 418385 sc-eQTL 8.38e-01 -0.0189 0.0924 0.764 B_Intermediate L2
ENSG00000120805 ARL1 290718 sc-eQTL 1.98e-01 -0.134 0.104 0.764 B_Intermediate L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 8.39e-01 -0.0175 0.0859 0.764 B_Intermediate L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 5.04e-02 -0.18 0.0914 0.764 B_Intermediate L2
ENSG00000139351 SYCP3 -40982 sc-eQTL 5.65e-03 0.266 0.0952 0.764 B_Intermediate L2
ENSG00000185480 PARPBP -421695 sc-eQTL 8.17e-01 0.0235 0.102 0.764 B_Intermediate L2
ENSG00000281344 HELLPAR -499095 sc-eQTL 2.96e-01 -0.102 0.0973 0.764 B_Intermediate L2
ENSG00000017427 IGF1 -783254 sc-eQTL 2.22e-01 0.0472 0.0385 0.763 B_Memory L2
ENSG00000075188 NUP37 -421630 sc-eQTL 4.03e-01 0.0855 0.102 0.763 B_Memory L2
ENSG00000111666 CHPT1 1543 sc-eQTL 9.84e-02 0.11 0.0663 0.763 B_Memory L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 6.77e-01 -0.0381 0.0913 0.763 B_Memory L2
ENSG00000120800 UTP20 418385 sc-eQTL 2.76e-01 -0.109 0.1 0.763 B_Memory L2
ENSG00000120805 ARL1 290718 sc-eQTL 8.67e-01 0.0167 0.0997 0.763 B_Memory L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 8.98e-01 -0.0115 0.0892 0.763 B_Memory L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 5.88e-01 -0.0507 0.0934 0.763 B_Memory L2
ENSG00000139351 SYCP3 -40982 sc-eQTL 8.06e-01 0.0236 0.0962 0.763 B_Memory L2
ENSG00000185480 PARPBP -421695 sc-eQTL 5.80e-02 0.186 0.0976 0.763 B_Memory L2
ENSG00000281344 HELLPAR -499095 sc-eQTL 5.76e-01 0.0501 0.0896 0.763 B_Memory L2
ENSG00000017427 IGF1 -783254 sc-eQTL 7.27e-01 -0.0187 0.0534 0.763 B_Naive1 L2
ENSG00000075188 NUP37 -421630 sc-eQTL 6.15e-01 0.0487 0.0965 0.763 B_Naive1 L2
ENSG00000111666 CHPT1 1543 sc-eQTL 3.16e-01 0.0504 0.0501 0.763 B_Naive1 L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 4.29e-01 -0.0561 0.0709 0.763 B_Naive1 L2
ENSG00000120800 UTP20 418385 sc-eQTL 4.93e-01 -0.0578 0.0842 0.763 B_Naive1 L2
ENSG00000120805 ARL1 290718 sc-eQTL 5.95e-01 0.0501 0.094 0.763 B_Naive1 L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 6.44e-01 0.033 0.0712 0.763 B_Naive1 L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 1.40e-01 -0.114 0.0768 0.763 B_Naive1 L2
ENSG00000139351 SYCP3 -40982 sc-eQTL 1.89e-01 0.138 0.104 0.763 B_Naive1 L2
ENSG00000185480 PARPBP -421695 sc-eQTL 3.96e-01 -0.0866 0.102 0.763 B_Naive1 L2
ENSG00000281344 HELLPAR -499095 sc-eQTL 8.19e-01 0.0219 0.0956 0.763 B_Naive1 L2
ENSG00000017427 IGF1 -783254 sc-eQTL 7.25e-01 -0.0164 0.0465 0.764 B_Naive2 L2
ENSG00000075188 NUP37 -421630 sc-eQTL 8.29e-01 -0.0206 0.0953 0.764 B_Naive2 L2
ENSG00000111666 CHPT1 1543 sc-eQTL 2.36e-02 0.115 0.0504 0.764 B_Naive2 L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 5.77e-02 -0.15 0.0784 0.764 B_Naive2 L2
ENSG00000120800 UTP20 418385 sc-eQTL 6.71e-01 0.039 0.0916 0.764 B_Naive2 L2
ENSG00000120805 ARL1 290718 sc-eQTL 9.81e-01 -0.00235 0.101 0.764 B_Naive2 L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 9.52e-01 0.00525 0.0876 0.764 B_Naive2 L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 3.17e-01 -0.0869 0.0866 0.764 B_Naive2 L2
ENSG00000139351 SYCP3 -40982 sc-eQTL 7.11e-01 -0.0339 0.0914 0.764 B_Naive2 L2
ENSG00000185480 PARPBP -421695 sc-eQTL 2.32e-01 -0.126 0.105 0.764 B_Naive2 L2
ENSG00000281344 HELLPAR -499095 sc-eQTL 3.00e-01 -0.0941 0.0906 0.764 B_Naive2 L2
ENSG00000075188 NUP37 -421630 sc-eQTL 1.97e-01 0.133 0.103 0.764 CD4_CTL L2
ENSG00000111666 CHPT1 1543 sc-eQTL 1.69e-06 0.483 0.0978 0.764 CD4_CTL L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 1.50e-01 -0.13 0.0901 0.764 CD4_CTL L2
ENSG00000120800 UTP20 418385 sc-eQTL 9.68e-01 -0.00397 0.0996 0.764 CD4_CTL L2
ENSG00000120805 ARL1 290718 sc-eQTL 1.88e-01 0.139 0.105 0.764 CD4_CTL L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 2.16e-01 -0.125 0.101 0.764 CD4_CTL L2
ENSG00000075188 NUP37 -421630 sc-eQTL 4.98e-02 0.15 0.076 0.763 CD4_Naive L2
ENSG00000111666 CHPT1 1543 sc-eQTL 2.74e-13 0.608 0.0779 0.763 CD4_Naive L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 1.18e-03 -0.219 0.0665 0.763 CD4_Naive L2
ENSG00000120800 UTP20 418385 sc-eQTL 8.27e-01 -0.0163 0.0743 0.763 CD4_Naive L2
ENSG00000120805 ARL1 290718 sc-eQTL 7.18e-01 0.0291 0.0804 0.763 CD4_Naive L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 2.28e-01 -0.0677 0.056 0.763 CD4_Naive L2
ENSG00000075188 NUP37 -421630 sc-eQTL 7.84e-01 0.0223 0.0813 0.763 CD4_TCM L2
ENSG00000111666 CHPT1 1543 sc-eQTL 1.90e-12 0.624 0.0833 0.763 CD4_TCM L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 5.82e-02 -0.137 0.072 0.763 CD4_TCM L2
ENSG00000120800 UTP20 418385 sc-eQTL 7.68e-01 -0.0268 0.0908 0.763 CD4_TCM L2
ENSG00000120805 ARL1 290718 sc-eQTL 1.03e-01 0.138 0.0845 0.763 CD4_TCM L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 9.61e-01 0.00273 0.0558 0.763 CD4_TCM L2
ENSG00000075188 NUP37 -421630 sc-eQTL 5.73e-01 0.0548 0.097 0.763 CD4_TEM L2
ENSG00000111666 CHPT1 1543 sc-eQTL 2.73e-10 0.564 0.085 0.763 CD4_TEM L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 3.40e-01 -0.0858 0.0898 0.763 CD4_TEM L2
ENSG00000120800 UTP20 418385 sc-eQTL 9.15e-01 -0.0105 0.0973 0.763 CD4_TEM L2
ENSG00000120805 ARL1 290718 sc-eQTL 3.73e-01 0.082 0.0918 0.763 CD4_TEM L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 5.55e-01 -0.0487 0.0823 0.763 CD4_TEM L2
ENSG00000075188 NUP37 -421630 sc-eQTL 3.87e-01 -0.0775 0.0893 0.763 CD8_CTL L2
ENSG00000111666 CHPT1 1543 sc-eQTL 2.22e-08 0.495 0.0852 0.763 CD8_CTL L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 5.88e-02 -0.138 0.0728 0.763 CD8_CTL L2
ENSG00000120800 UTP20 418385 sc-eQTL 9.63e-01 -0.00461 0.0993 0.763 CD8_CTL L2
ENSG00000120805 ARL1 290718 sc-eQTL 5.98e-01 0.0518 0.0981 0.763 CD8_CTL L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 7.69e-01 0.0246 0.0837 0.763 CD8_CTL L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 9.22e-01 -0.0102 0.104 0.763 CD8_CTL L2
ENSG00000075188 NUP37 -421630 sc-eQTL 6.43e-01 0.0431 0.0928 0.763 CD8_Naive L2
ENSG00000111666 CHPT1 1543 sc-eQTL 2.83e-10 0.556 0.084 0.763 CD8_Naive L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 6.44e-02 -0.153 0.0822 0.763 CD8_Naive L2
ENSG00000120800 UTP20 418385 sc-eQTL 8.48e-01 0.0169 0.0881 0.763 CD8_Naive L2
ENSG00000120805 ARL1 290718 sc-eQTL 8.55e-01 0.0175 0.0957 0.763 CD8_Naive L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 4.86e-02 -0.124 0.0624 0.763 CD8_Naive L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 1.60e-01 -0.136 0.0968 0.763 CD8_Naive L2
ENSG00000075188 NUP37 -421630 sc-eQTL 6.07e-01 0.0516 0.1 0.764 CD8_TCM L2
ENSG00000111666 CHPT1 1543 sc-eQTL 2.57e-04 0.323 0.0867 0.764 CD8_TCM L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 3.31e-01 -0.0902 0.0926 0.764 CD8_TCM L2
ENSG00000120800 UTP20 418385 sc-eQTL 4.70e-01 0.0733 0.101 0.764 CD8_TCM L2
ENSG00000120805 ARL1 290718 sc-eQTL 7.59e-01 0.0306 0.0995 0.764 CD8_TCM L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 1.59e-02 0.213 0.0878 0.764 CD8_TCM L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 8.06e-01 0.0239 0.0971 0.764 CD8_TCM L2
ENSG00000075188 NUP37 -421630 sc-eQTL 6.48e-01 -0.0461 0.101 0.765 CD8_TEM L2
ENSG00000111666 CHPT1 1543 sc-eQTL 1.26e-04 0.359 0.0918 0.765 CD8_TEM L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 1.53e-01 -0.146 0.102 0.765 CD8_TEM L2
ENSG00000120800 UTP20 418385 sc-eQTL 3.75e-01 0.0971 0.109 0.765 CD8_TEM L2
ENSG00000120805 ARL1 290718 sc-eQTL 6.03e-01 -0.0546 0.105 0.765 CD8_TEM L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 1.94e-02 0.213 0.0903 0.765 CD8_TEM L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 3.31e-01 0.0982 0.101 0.765 CD8_TEM L2
ENSG00000017427 IGF1 -783254 sc-eQTL 4.00e-01 -0.0297 0.0352 0.764 MAIT L2
ENSG00000075188 NUP37 -421630 sc-eQTL 9.85e-02 0.163 0.0984 0.764 MAIT L2
ENSG00000111666 CHPT1 1543 sc-eQTL 1.96e-05 0.404 0.0923 0.764 MAIT L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 1.21e-03 -0.274 0.0834 0.764 MAIT L2
ENSG00000120800 UTP20 418385 sc-eQTL 1.61e-01 0.144 0.102 0.764 MAIT L2
ENSG00000120805 ARL1 290718 sc-eQTL 7.67e-01 -0.031 0.105 0.764 MAIT L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 3.39e-01 -0.0831 0.0868 0.764 MAIT L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 1.38e-02 -0.242 0.0972 0.764 MAIT L2
ENSG00000185480 PARPBP -421695 sc-eQTL 6.55e-01 0.0433 0.0966 0.764 MAIT L2
ENSG00000281344 HELLPAR -499095 sc-eQTL 6.00e-01 -0.0449 0.0855 0.764 MAIT L2
ENSG00000075188 NUP37 -421630 sc-eQTL 7.33e-01 -0.0366 0.107 0.758 NK_CD56bright L2
ENSG00000111666 CHPT1 1543 sc-eQTL 3.96e-03 0.221 0.076 0.758 NK_CD56bright L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 1.58e-01 0.126 0.0892 0.758 NK_CD56bright L2
ENSG00000120800 UTP20 418385 sc-eQTL 4.12e-01 -0.0858 0.104 0.758 NK_CD56bright L2
ENSG00000120805 ARL1 290718 sc-eQTL 6.98e-01 -0.0398 0.102 0.758 NK_CD56bright L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 7.35e-01 -0.0313 0.0924 0.758 NK_CD56bright L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 4.90e-01 -0.0672 0.0971 0.758 NK_CD56bright L2
ENSG00000185480 PARPBP -421695 sc-eQTL 4.89e-01 0.071 0.103 0.758 NK_CD56bright L2
ENSG00000075188 NUP37 -421630 sc-eQTL 7.82e-01 0.0257 0.0927 0.763 NK_CD56dim L2
ENSG00000111666 CHPT1 1543 sc-eQTL 4.90e-13 0.617 0.0799 0.763 NK_CD56dim L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 2.53e-02 -0.152 0.0677 0.763 NK_CD56dim L2
ENSG00000120800 UTP20 418385 sc-eQTL 9.14e-01 0.0103 0.0951 0.763 NK_CD56dim L2
ENSG00000120805 ARL1 290718 sc-eQTL 8.34e-01 0.0193 0.092 0.763 NK_CD56dim L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 1.51e-01 0.113 0.0784 0.763 NK_CD56dim L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 2.80e-01 -0.103 0.0954 0.763 NK_CD56dim L2
ENSG00000185480 PARPBP -421695 sc-eQTL 9.23e-01 0.0104 0.108 0.763 NK_CD56dim L2
ENSG00000075188 NUP37 -421630 sc-eQTL 1.61e-01 -0.139 0.0989 0.758 NK_HLA L2
ENSG00000111666 CHPT1 1543 sc-eQTL 7.16e-04 0.341 0.0991 0.758 NK_HLA L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 1.69e-01 -0.113 0.0816 0.758 NK_HLA L2
ENSG00000120800 UTP20 418385 sc-eQTL 4.53e-01 0.0804 0.107 0.758 NK_HLA L2
ENSG00000120805 ARL1 290718 sc-eQTL 3.97e-01 0.0929 0.109 0.758 NK_HLA L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 7.82e-01 0.0282 0.102 0.758 NK_HLA L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 1.38e-02 -0.256 0.103 0.758 NK_HLA L2
ENSG00000185480 PARPBP -421695 sc-eQTL 5.39e-01 -0.0632 0.103 0.758 NK_HLA L2
ENSG00000075188 NUP37 -421630 sc-eQTL 1.40e-01 0.138 0.0933 0.763 NK_cytokine L2
ENSG00000111666 CHPT1 1543 sc-eQTL 1.23e-08 0.482 0.0812 0.763 NK_cytokine L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 9.03e-03 -0.173 0.0656 0.763 NK_cytokine L2
ENSG00000120800 UTP20 418385 sc-eQTL 1.83e-01 0.124 0.0926 0.763 NK_cytokine L2
ENSG00000120805 ARL1 290718 sc-eQTL 4.94e-01 0.0639 0.0934 0.763 NK_cytokine L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 4.06e-02 0.15 0.0729 0.763 NK_cytokine L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 3.29e-01 -0.0936 0.0957 0.763 NK_cytokine L2
ENSG00000185480 PARPBP -421695 sc-eQTL 5.43e-01 0.063 0.104 0.763 NK_cytokine L2
ENSG00000017427 IGF1 -783254 sc-eQTL 1.67e-01 0.101 0.0726 0.752 PB L2
ENSG00000075188 NUP37 -421630 sc-eQTL 4.61e-02 -0.195 0.0968 0.752 PB L2
ENSG00000111666 CHPT1 1543 sc-eQTL 5.54e-01 0.0453 0.0763 0.752 PB L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 4.24e-01 -0.0878 0.11 0.752 PB L2
ENSG00000120800 UTP20 418385 sc-eQTL 6.78e-01 -0.0525 0.126 0.752 PB L2
ENSG00000120805 ARL1 290718 sc-eQTL 5.62e-01 -0.045 0.0774 0.752 PB L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 5.19e-01 -0.0578 0.0893 0.752 PB L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 4.65e-01 -0.0665 0.0906 0.752 PB L2
ENSG00000139351 SYCP3 -40982 sc-eQTL 1.60e-01 0.148 0.105 0.752 PB L2
ENSG00000185480 PARPBP -421695 sc-eQTL 7.74e-01 0.0278 0.0966 0.752 PB L2
ENSG00000281344 HELLPAR -499095 sc-eQTL 1.96e-01 -0.116 0.0888 0.752 PB L2
ENSG00000017427 IGF1 -783254 sc-eQTL 9.22e-01 0.00348 0.0353 0.763 Pro_T L2
ENSG00000075188 NUP37 -421630 sc-eQTL 2.84e-01 0.0764 0.071 0.763 Pro_T L2
ENSG00000111666 CHPT1 1543 sc-eQTL 1.20e-03 0.302 0.092 0.763 Pro_T L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 1.71e-01 -0.0955 0.0695 0.763 Pro_T L2
ENSG00000120800 UTP20 418385 sc-eQTL 3.79e-01 0.0878 0.0995 0.763 Pro_T L2
ENSG00000120805 ARL1 290718 sc-eQTL 8.54e-01 -0.0139 0.0754 0.763 Pro_T L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 5.75e-01 -0.046 0.0819 0.763 Pro_T L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 9.69e-01 0.00276 0.0703 0.763 Pro_T L2
ENSG00000185480 PARPBP -421695 sc-eQTL 2.44e-01 0.0758 0.0649 0.763 Pro_T L2
ENSG00000281344 HELLPAR -499095 sc-eQTL 5.92e-01 0.0382 0.0712 0.763 Pro_T L2
ENSG00000075188 NUP37 -421630 sc-eQTL 3.87e-01 0.0872 0.101 0.763 Treg L2
ENSG00000111666 CHPT1 1543 sc-eQTL 3.70e-10 0.629 0.0956 0.763 Treg L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 3.68e-01 -0.0825 0.0915 0.763 Treg L2
ENSG00000120800 UTP20 418385 sc-eQTL 3.91e-01 0.0857 0.0996 0.763 Treg L2
ENSG00000120805 ARL1 290718 sc-eQTL 3.71e-01 -0.0924 0.103 0.763 Treg L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 3.65e-01 -0.076 0.0837 0.763 Treg L2
ENSG00000075188 NUP37 -421630 sc-eQTL 2.83e-02 -0.199 0.0902 0.766 cDC L2
ENSG00000111666 CHPT1 1543 sc-eQTL 4.60e-01 0.0659 0.089 0.766 cDC L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 8.30e-02 -0.199 0.114 0.766 cDC L2
ENSG00000120800 UTP20 418385 sc-eQTL 2.54e-01 -0.119 0.104 0.766 cDC L2
ENSG00000120805 ARL1 290718 sc-eQTL 3.81e-01 0.0947 0.108 0.766 cDC L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 3.61e-01 -0.0928 0.101 0.766 cDC L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 6.68e-01 0.034 0.0791 0.766 cDC L2
ENSG00000185480 PARPBP -421695 sc-eQTL 6.75e-01 -0.0378 0.0901 0.766 cDC L2
ENSG00000075188 NUP37 -421630 sc-eQTL 5.16e-02 0.175 0.0892 0.763 cMono_IL1B L2
ENSG00000111666 CHPT1 1543 sc-eQTL 4.96e-01 0.0462 0.0678 0.763 cMono_IL1B L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 4.05e-01 0.075 0.0899 0.763 cMono_IL1B L2
ENSG00000120800 UTP20 418385 sc-eQTL 8.18e-01 0.0233 0.101 0.763 cMono_IL1B L2
ENSG00000120805 ARL1 290718 sc-eQTL 9.46e-01 -0.00616 0.0907 0.763 cMono_IL1B L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 8.85e-01 0.0114 0.0782 0.763 cMono_IL1B L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 5.50e-04 -0.227 0.0648 0.763 cMono_IL1B L2
ENSG00000075188 NUP37 -421630 sc-eQTL 3.81e-01 0.0846 0.0963 0.763 cMono_S100A L2
ENSG00000111666 CHPT1 1543 sc-eQTL 5.15e-01 -0.0482 0.0739 0.763 cMono_S100A L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 9.18e-01 0.00932 0.09 0.763 cMono_S100A L2
ENSG00000120800 UTP20 418385 sc-eQTL 9.81e-01 0.00247 0.105 0.763 cMono_S100A L2
ENSG00000120805 ARL1 290718 sc-eQTL 6.82e-01 -0.0406 0.099 0.763 cMono_S100A L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 5.15e-02 -0.178 0.0908 0.763 cMono_S100A L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 1.33e-02 -0.176 0.0704 0.763 cMono_S100A L2
ENSG00000075188 NUP37 -421630 sc-eQTL 5.16e-01 0.0799 0.123 0.767 gdT L2
ENSG00000111666 CHPT1 1543 sc-eQTL 7.11e-03 0.307 0.112 0.767 gdT L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 3.12e-01 -0.0878 0.0865 0.767 gdT L2
ENSG00000120800 UTP20 418385 sc-eQTL 8.41e-01 0.023 0.115 0.767 gdT L2
ENSG00000120805 ARL1 290718 sc-eQTL 7.45e-01 0.0391 0.12 0.767 gdT L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 9.66e-01 0.00473 0.112 0.767 gdT L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 4.88e-01 0.0791 0.114 0.767 gdT L2
ENSG00000185480 PARPBP -421695 sc-eQTL 6.57e-02 -0.205 0.111 0.767 gdT L2
ENSG00000281344 HELLPAR -499095 sc-eQTL 8.64e-01 -0.0175 0.103 0.767 gdT L2
ENSG00000075188 NUP37 -421630 sc-eQTL 7.32e-02 0.173 0.0962 0.769 intMono L2
ENSG00000111666 CHPT1 1543 sc-eQTL 9.59e-01 -0.00456 0.0887 0.769 intMono L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 9.98e-01 0.000229 0.104 0.769 intMono L2
ENSG00000120800 UTP20 418385 sc-eQTL 5.73e-01 0.0549 0.0974 0.769 intMono L2
ENSG00000120805 ARL1 290718 sc-eQTL 7.16e-01 0.0367 0.101 0.769 intMono L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 9.90e-01 -0.00117 0.0975 0.769 intMono L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 1.31e-01 -0.129 0.0848 0.769 intMono L2
ENSG00000075188 NUP37 -421630 sc-eQTL 3.07e-01 -0.101 0.0988 0.769 ncMono L2
ENSG00000111666 CHPT1 1543 sc-eQTL 5.60e-02 0.174 0.0906 0.769 ncMono L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 8.07e-01 -0.0267 0.11 0.769 ncMono L2
ENSG00000120800 UTP20 418385 sc-eQTL 2.05e-01 -0.121 0.0954 0.769 ncMono L2
ENSG00000120805 ARL1 290718 sc-eQTL 3.80e-01 -0.0809 0.0919 0.769 ncMono L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 6.91e-01 0.0352 0.0885 0.769 ncMono L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 1.70e-02 -0.195 0.0812 0.769 ncMono L2
ENSG00000075188 NUP37 -421630 sc-eQTL 1.94e-01 0.153 0.117 0.763 pDC L2
ENSG00000111666 CHPT1 1543 sc-eQTL 1.89e-01 0.135 0.102 0.763 pDC L2
ENSG00000111670 GNPTAB -132469 sc-eQTL 1.83e-01 -0.144 0.108 0.763 pDC L2
ENSG00000120800 UTP20 418385 sc-eQTL 4.73e-01 -0.0777 0.108 0.763 pDC L2
ENSG00000120805 ARL1 290718 sc-eQTL 8.38e-01 -0.0232 0.114 0.763 pDC L2
ENSG00000120860 WASHC3 -363659 sc-eQTL 1.43e-01 -0.145 0.0984 0.763 pDC L2
ENSG00000136048 DRAM1 -179090 sc-eQTL 5.91e-01 0.0412 0.0766 0.763 pDC L2
ENSG00000185480 PARPBP -421695 sc-eQTL 5.54e-01 0.0602 0.102 0.763 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000017427 IGF1 -783254 sc-eQTL 5.86e-01 0.0268 0.0491 0.763 B_Memory LOneK1K
ENSG00000075188 NUP37 -421630 sc-eQTL 7.01e-01 0.0379 0.0986 0.763 B_Memory LOneK1K
ENSG00000111666 CHPT1 1543 sc-eQTL 4.74e-01 0.0372 0.0518 0.763 B_Memory LOneK1K
ENSG00000111670 GNPTAB -132469 sc-eQTL 1.73e-01 -0.111 0.0812 0.763 B_Memory LOneK1K
ENSG00000120800 UTP20 418385 sc-eQTL 3.07e-01 -0.0859 0.0838 0.763 B_Memory LOneK1K
ENSG00000120805 ARL1 290718 sc-eQTL 6.85e-01 -0.0386 0.095 0.763 B_Memory LOneK1K
ENSG00000120860 WASHC3 -363659 sc-eQTL 9.18e-01 0.00732 0.0709 0.763 B_Memory LOneK1K
ENSG00000136048 DRAM1 -179090 sc-eQTL 4.30e-02 -0.171 0.0841 0.763 B_Memory LOneK1K
ENSG00000139351 SYCP3 -40982 sc-eQTL 1.06e-01 0.158 0.0973 0.763 B_Memory LOneK1K
ENSG00000185480 PARPBP -421695 sc-eQTL 7.68e-02 0.181 0.102 0.763 B_Memory LOneK1K
ENSG00000281344 HELLPAR -499095 sc-eQTL 3.17e-01 -0.102 0.101 0.763 B_Memory LOneK1K
ENSG00000017427 IGF1 -783254 sc-eQTL 9.97e-01 0.000178 0.0566 0.763 B_Naive LOneK1K
ENSG00000075188 NUP37 -421630 sc-eQTL 9.16e-01 -0.00975 0.0927 0.763 B_Naive LOneK1K
ENSG00000111666 CHPT1 1543 sc-eQTL 3.13e-01 0.0461 0.0456 0.763 B_Naive LOneK1K
ENSG00000111670 GNPTAB -132469 sc-eQTL 2.07e-01 -0.0826 0.0653 0.763 B_Naive LOneK1K
ENSG00000120800 UTP20 418385 sc-eQTL 5.39e-01 -0.0493 0.0801 0.763 B_Naive LOneK1K
ENSG00000120805 ARL1 290718 sc-eQTL 9.38e-01 0.00713 0.0915 0.763 B_Naive LOneK1K
ENSG00000120860 WASHC3 -363659 sc-eQTL 6.56e-01 0.0305 0.0685 0.763 B_Naive LOneK1K
ENSG00000136048 DRAM1 -179090 sc-eQTL 8.93e-02 -0.122 0.0714 0.763 B_Naive LOneK1K
ENSG00000139351 SYCP3 -40982 sc-eQTL 2.78e-01 0.113 0.103 0.763 B_Naive LOneK1K
ENSG00000185480 PARPBP -421695 sc-eQTL 3.51e-01 -0.0984 0.105 0.763 B_Naive LOneK1K
ENSG00000281344 HELLPAR -499095 sc-eQTL 7.70e-01 -0.0281 0.0961 0.763 B_Naive LOneK1K
ENSG00000075188 NUP37 -421630 sc-eQTL 4.39e-02 0.166 0.0817 0.763 CD14_Mono LOneK1K
ENSG00000111666 CHPT1 1543 sc-eQTL 8.49e-01 0.0127 0.0667 0.763 CD14_Mono LOneK1K
ENSG00000111670 GNPTAB -132469 sc-eQTL 8.47e-01 0.0166 0.0858 0.763 CD14_Mono LOneK1K
ENSG00000120800 UTP20 418385 sc-eQTL 5.10e-01 0.0668 0.101 0.763 CD14_Mono LOneK1K
ENSG00000120805 ARL1 290718 sc-eQTL 7.96e-01 -0.0224 0.0868 0.763 CD14_Mono LOneK1K
ENSG00000120860 WASHC3 -363659 sc-eQTL 2.02e-01 -0.0964 0.0752 0.763 CD14_Mono LOneK1K
ENSG00000136048 DRAM1 -179090 sc-eQTL 1.17e-04 -0.235 0.0598 0.763 CD14_Mono LOneK1K
ENSG00000075188 NUP37 -421630 sc-eQTL 7.83e-01 -0.0259 0.094 0.765 CD16_Mono LOneK1K
ENSG00000111666 CHPT1 1543 sc-eQTL 3.43e-01 0.0779 0.0819 0.765 CD16_Mono LOneK1K
ENSG00000111670 GNPTAB -132469 sc-eQTL 3.56e-01 -0.0917 0.0992 0.765 CD16_Mono LOneK1K
ENSG00000120800 UTP20 418385 sc-eQTL 4.14e-01 -0.0782 0.0955 0.765 CD16_Mono LOneK1K
ENSG00000120805 ARL1 290718 sc-eQTL 8.35e-01 -0.0198 0.095 0.765 CD16_Mono LOneK1K
ENSG00000120860 WASHC3 -363659 sc-eQTL 6.64e-01 0.0358 0.0824 0.765 CD16_Mono LOneK1K
ENSG00000136048 DRAM1 -179090 sc-eQTL 2.50e-02 -0.159 0.0703 0.765 CD16_Mono LOneK1K
ENSG00000075188 NUP37 -421630 sc-eQTL 5.30e-01 0.0559 0.089 0.763 NK_CD56dim LOneK1K
ENSG00000111666 CHPT1 1543 sc-eQTL 8.70e-15 0.629 0.0752 0.763 NK_CD56dim LOneK1K
ENSG00000111670 GNPTAB -132469 sc-eQTL 5.55e-03 -0.164 0.0584 0.763 NK_CD56dim LOneK1K
ENSG00000120800 UTP20 418385 sc-eQTL 3.90e-01 0.0784 0.0911 0.763 NK_CD56dim LOneK1K
ENSG00000120805 ARL1 290718 sc-eQTL 5.43e-01 0.0516 0.0847 0.763 NK_CD56dim LOneK1K
ENSG00000120860 WASHC3 -363659 sc-eQTL 1.75e-02 0.162 0.0677 0.763 NK_CD56dim LOneK1K
ENSG00000136048 DRAM1 -179090 sc-eQTL 4.74e-02 -0.182 0.0913 0.763 NK_CD56dim LOneK1K
ENSG00000185480 PARPBP -421695 sc-eQTL 9.13e-01 -0.0118 0.108 0.763 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111666 CHPT1 1543 eQTL 8.04e-05 0.117 0.0296 0.0 0.0 0.218
ENSG00000136048 DRAM1 -179090 eQTL 5.85e-17 -0.138 0.0162 0.0 0.0 0.218
ENSG00000185480 PARPBP -421695 eQTL 0.0178 -0.064 0.027 0.0 0.0 0.218

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111666 CHPT1 1543 0.000136 0.000101 1.32e-05 2.65e-05 1.1e-05 3.39e-05 9.47e-05 8.02e-06 7.14e-05 2.96e-05 9.24e-05 3.54e-05 0.000119 3.19e-05 1.15e-05 5.57e-05 4.26e-05 5.31e-05 1.53e-05 1.28e-05 3.15e-05 9.07e-05 8.08e-05 1.7e-05 9.49e-05 1.81e-05 3.09e-05 2.56e-05 8.32e-05 4.87e-05 4.3e-05 2.31e-06 4.67e-06 9.11e-06 1.99e-05 9.86e-06 4.33e-06 5.03e-06 7.07e-06 4.39e-06 2.04e-06 9.8e-05 1.06e-05 4.31e-07 5.51e-06 6.94e-06 8.03e-06 2.8e-06 2.05e-06
ENSG00000136048 DRAM1 -179090 1.61e-06 2.37e-06 5.82e-07 1.88e-06 4.59e-07 8.27e-07 2.11e-06 6.72e-07 1.72e-06 9.12e-07 2.41e-06 1.41e-06 3.25e-06 1.24e-06 8.27e-07 1.21e-06 1.58e-06 2.15e-06 1.59e-06 8.21e-07 8.81e-07 2.76e-06 2.11e-06 9.91e-07 4.64e-06 1.12e-06 1.38e-06 1.17e-06 1.78e-06 2.29e-06 1.74e-06 2.45e-07 2.9e-07 1.24e-06 1.79e-06 8.31e-07 7.3e-07 3.46e-07 9.49e-07 4.35e-07 2.88e-07 3.87e-06 4.96e-07 1.87e-07 3.44e-07 3.24e-07 5.32e-07 2.29e-07 2.8e-07