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Genes within 1Mb (chr1:70350880:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066557 LRRC40 145301 sc-eQTL 9.24e-01 0.00745 0.0776 0.37 B L1
ENSG00000116754 SRSF11 145198 sc-eQTL 7.76e-04 -0.2 0.0586 0.37 B L1
ENSG00000118454 ANKRD13C -3854 sc-eQTL 1.06e-01 -0.113 0.0697 0.37 B L1
ENSG00000132485 ZRANB2 -730409 sc-eQTL 9.81e-01 -0.0014 0.0591 0.37 B L1
ENSG00000197568 HHLA3 -3925 sc-eQTL 3.47e-02 0.163 0.0765 0.37 B L1
ENSG00000066557 LRRC40 145301 sc-eQTL 1.13e-01 -0.103 0.0651 0.37 CD4T L1
ENSG00000116754 SRSF11 145198 sc-eQTL 1.31e-04 -0.194 0.0497 0.37 CD4T L1
ENSG00000116761 CTH -60338 sc-eQTL 1.13e-02 -0.131 0.0514 0.37 CD4T L1
ENSG00000118454 ANKRD13C -3854 sc-eQTL 4.25e-02 -0.0965 0.0473 0.37 CD4T L1
ENSG00000132485 ZRANB2 -730409 sc-eQTL 2.20e-01 -0.0692 0.0562 0.37 CD4T L1
ENSG00000197568 HHLA3 -3925 sc-eQTL 1.03e-05 0.286 0.0633 0.37 CD4T L1
ENSG00000066557 LRRC40 145301 sc-eQTL 8.51e-01 0.0138 0.0734 0.37 CD8T L1
ENSG00000116754 SRSF11 145198 sc-eQTL 1.31e-01 -0.0923 0.0609 0.37 CD8T L1
ENSG00000116761 CTH -60338 sc-eQTL 1.86e-02 -0.14 0.0591 0.37 CD8T L1
ENSG00000118454 ANKRD13C -3854 sc-eQTL 3.06e-01 -0.0592 0.0577 0.37 CD8T L1
ENSG00000132485 ZRANB2 -730409 sc-eQTL 9.52e-01 -0.00403 0.0672 0.37 CD8T L1
ENSG00000197568 HHLA3 -3925 sc-eQTL 2.41e-03 0.206 0.0671 0.37 CD8T L1
ENSG00000066557 LRRC40 145301 sc-eQTL 6.40e-01 0.0433 0.0924 0.378 DC L1
ENSG00000116754 SRSF11 145198 sc-eQTL 4.75e-01 -0.0441 0.0617 0.378 DC L1
ENSG00000116761 CTH -60338 sc-eQTL 2.90e-01 -0.0842 0.0794 0.378 DC L1
ENSG00000118454 ANKRD13C -3854 sc-eQTL 7.09e-01 -0.0315 0.0842 0.378 DC L1
ENSG00000132485 ZRANB2 -730409 sc-eQTL 9.31e-01 0.0064 0.0737 0.378 DC L1
ENSG00000197568 HHLA3 -3925 sc-eQTL 2.83e-01 -0.0896 0.0833 0.378 DC L1
ENSG00000066557 LRRC40 145301 sc-eQTL 2.17e-01 -0.106 0.0853 0.37 Mono L1
ENSG00000116754 SRSF11 145198 sc-eQTL 5.30e-01 -0.0312 0.0496 0.37 Mono L1
ENSG00000116761 CTH -60338 sc-eQTL 3.28e-02 -0.144 0.0673 0.37 Mono L1
ENSG00000118454 ANKRD13C -3854 sc-eQTL 1.86e-02 -0.188 0.0794 0.37 Mono L1
ENSG00000132485 ZRANB2 -730409 sc-eQTL 1.23e-02 -0.174 0.0688 0.37 Mono L1
ENSG00000066557 LRRC40 145301 sc-eQTL 8.20e-01 -0.0169 0.074 0.371 NK L1
ENSG00000116754 SRSF11 145198 sc-eQTL 1.48e-01 -0.0944 0.065 0.371 NK L1
ENSG00000118454 ANKRD13C -3854 sc-eQTL 6.72e-03 -0.177 0.0645 0.371 NK L1
ENSG00000132485 ZRANB2 -730409 sc-eQTL 3.33e-02 -0.143 0.0669 0.371 NK L1
ENSG00000197568 HHLA3 -3925 sc-eQTL 3.08e-01 0.0841 0.0823 0.371 NK L1
ENSG00000066557 LRRC40 145301 sc-eQTL 4.43e-01 -0.0669 0.0871 0.37 Other_T L1
ENSG00000116754 SRSF11 145198 sc-eQTL 8.69e-02 -0.117 0.0681 0.37 Other_T L1
ENSG00000116761 CTH -60338 sc-eQTL 2.87e-01 -0.083 0.0778 0.37 Other_T L1
ENSG00000118454 ANKRD13C -3854 sc-eQTL 1.24e-01 -0.127 0.0822 0.37 Other_T L1
ENSG00000132485 ZRANB2 -730409 sc-eQTL 2.19e-01 -0.0948 0.0769 0.37 Other_T L1
ENSG00000197568 HHLA3 -3925 sc-eQTL 1.86e-01 0.115 0.0871 0.37 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066557 LRRC40 145301 sc-eQTL 1.21e-02 -0.235 0.0928 0.375 B_Activated L2
ENSG00000116754 SRSF11 145198 sc-eQTL 8.67e-01 -0.0168 0.1 0.375 B_Activated L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 4.89e-01 -0.0699 0.101 0.375 B_Activated L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 3.66e-01 0.0921 0.102 0.375 B_Activated L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 8.88e-01 0.0119 0.0845 0.375 B_Activated L2
ENSG00000066557 LRRC40 145301 sc-eQTL 7.38e-01 0.0301 0.0896 0.371 B_Intermediate L2
ENSG00000116754 SRSF11 145198 sc-eQTL 1.85e-02 -0.179 0.0753 0.371 B_Intermediate L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 1.83e-01 -0.116 0.0865 0.371 B_Intermediate L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 3.87e-01 -0.0746 0.086 0.371 B_Intermediate L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 9.99e-01 0.000109 0.0911 0.371 B_Intermediate L2
ENSG00000066557 LRRC40 145301 sc-eQTL 7.48e-01 -0.0302 0.094 0.371 B_Memory L2
ENSG00000116754 SRSF11 145198 sc-eQTL 3.51e-02 -0.175 0.0824 0.371 B_Memory L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 9.36e-01 -0.00623 0.0772 0.371 B_Memory L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 8.22e-01 -0.0202 0.0898 0.371 B_Memory L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 2.06e-01 0.112 0.0882 0.371 B_Memory L2
ENSG00000066557 LRRC40 145301 sc-eQTL 8.59e-01 0.0156 0.0878 0.37 B_Naive1 L2
ENSG00000116754 SRSF11 145198 sc-eQTL 1.31e-02 -0.172 0.0687 0.37 B_Naive1 L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 4.33e-01 -0.0583 0.0742 0.37 B_Naive1 L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 4.29e-01 -0.0595 0.075 0.37 B_Naive1 L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 1.62e-02 0.203 0.0839 0.37 B_Naive1 L2
ENSG00000066557 LRRC40 145301 sc-eQTL 6.55e-01 -0.0412 0.0921 0.371 B_Naive2 L2
ENSG00000116754 SRSF11 145198 sc-eQTL 9.31e-05 -0.312 0.0784 0.371 B_Naive2 L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 4.97e-01 -0.0649 0.0952 0.371 B_Naive2 L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 6.17e-01 0.037 0.0739 0.371 B_Naive2 L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 9.85e-02 0.144 0.0868 0.371 B_Naive2 L2
ENSG00000066557 LRRC40 145301 sc-eQTL 6.33e-02 -0.168 0.0898 0.368 CD4_CTL L2
ENSG00000116754 SRSF11 145198 sc-eQTL 3.28e-01 -0.092 0.0938 0.368 CD4_CTL L2
ENSG00000116761 CTH -60338 sc-eQTL 2.54e-01 -0.0897 0.0785 0.368 CD4_CTL L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 3.93e-01 -0.0742 0.0867 0.368 CD4_CTL L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 4.62e-01 -0.0692 0.0939 0.368 CD4_CTL L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 3.78e-01 0.0776 0.0877 0.368 CD4_CTL L2
ENSG00000066557 LRRC40 145301 sc-eQTL 3.21e-01 -0.0732 0.0735 0.37 CD4_Naive L2
ENSG00000116754 SRSF11 145198 sc-eQTL 1.40e-03 -0.169 0.0522 0.37 CD4_Naive L2
ENSG00000116761 CTH -60338 sc-eQTL 3.88e-02 -0.117 0.0561 0.37 CD4_Naive L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 2.04e-02 -0.13 0.0557 0.37 CD4_Naive L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 3.32e-01 -0.059 0.0607 0.37 CD4_Naive L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 5.05e-03 0.196 0.0693 0.37 CD4_Naive L2
ENSG00000066557 LRRC40 145301 sc-eQTL 2.53e-02 -0.193 0.0857 0.37 CD4_TCM L2
ENSG00000116754 SRSF11 145198 sc-eQTL 3.26e-03 -0.187 0.0627 0.37 CD4_TCM L2
ENSG00000116761 CTH -60338 sc-eQTL 1.94e-02 -0.163 0.0693 0.37 CD4_TCM L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 1.91e-01 -0.087 0.0663 0.37 CD4_TCM L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 7.86e-01 0.0195 0.072 0.37 CD4_TCM L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 6.26e-03 0.236 0.0856 0.37 CD4_TCM L2
ENSG00000066557 LRRC40 145301 sc-eQTL 2.66e-01 0.0977 0.0876 0.37 CD4_TEM L2
ENSG00000116754 SRSF11 145198 sc-eQTL 9.68e-04 -0.25 0.0747 0.37 CD4_TEM L2
ENSG00000116761 CTH -60338 sc-eQTL 3.72e-01 -0.0697 0.0779 0.37 CD4_TEM L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 1.40e-01 -0.114 0.077 0.37 CD4_TEM L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 6.77e-01 -0.0357 0.0857 0.37 CD4_TEM L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 2.06e-01 0.111 0.0877 0.37 CD4_TEM L2
ENSG00000066557 LRRC40 145301 sc-eQTL 8.31e-01 -0.0176 0.0821 0.37 CD8_CTL L2
ENSG00000116754 SRSF11 145198 sc-eQTL 5.58e-03 -0.214 0.0764 0.37 CD8_CTL L2
ENSG00000116761 CTH -60338 sc-eQTL 4.21e-02 -0.153 0.075 0.37 CD8_CTL L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 1.29e-01 -0.135 0.0883 0.37 CD8_CTL L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 2.26e-01 -0.102 0.0842 0.37 CD8_CTL L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 1.77e-01 0.119 0.0881 0.37 CD8_CTL L2
ENSG00000066557 LRRC40 145301 sc-eQTL 8.42e-01 0.018 0.0903 0.37 CD8_Naive L2
ENSG00000116754 SRSF11 145198 sc-eQTL 2.03e-01 -0.0855 0.0669 0.37 CD8_Naive L2
ENSG00000116761 CTH -60338 sc-eQTL 1.22e-01 -0.108 0.0698 0.37 CD8_Naive L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 2.41e-01 -0.077 0.0655 0.37 CD8_Naive L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 6.99e-01 -0.0271 0.07 0.37 CD8_Naive L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 1.18e-02 0.188 0.0741 0.37 CD8_Naive L2
ENSG00000066557 LRRC40 145301 sc-eQTL 3.97e-01 -0.0822 0.0967 0.373 CD8_TCM L2
ENSG00000116754 SRSF11 145198 sc-eQTL 5.83e-01 -0.049 0.0892 0.373 CD8_TCM L2
ENSG00000116761 CTH -60338 sc-eQTL 2.09e-01 -0.112 0.0887 0.373 CD8_TCM L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 9.83e-01 -0.00199 0.0931 0.373 CD8_TCM L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 2.18e-01 -0.117 0.0949 0.373 CD8_TCM L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 2.59e-01 0.107 0.0942 0.373 CD8_TCM L2
ENSG00000066557 LRRC40 145301 sc-eQTL 9.54e-01 -0.00535 0.0937 0.361 CD8_TEM L2
ENSG00000116754 SRSF11 145198 sc-eQTL 8.03e-01 0.0218 0.0874 0.361 CD8_TEM L2
ENSG00000116761 CTH -60338 sc-eQTL 2.65e-01 -0.0939 0.0839 0.361 CD8_TEM L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 3.39e-01 0.0928 0.0968 0.361 CD8_TEM L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 3.86e-01 -0.087 0.1 0.361 CD8_TEM L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 1.31e-02 0.227 0.0908 0.361 CD8_TEM L2
ENSG00000066557 LRRC40 145301 sc-eQTL 3.98e-01 -0.0769 0.0908 0.368 MAIT L2
ENSG00000116754 SRSF11 145198 sc-eQTL 2.71e-01 -0.0982 0.089 0.368 MAIT L2
ENSG00000116761 CTH -60338 sc-eQTL 2.29e-01 -0.0906 0.0752 0.368 MAIT L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 7.15e-01 -0.0305 0.0836 0.368 MAIT L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 8.02e-02 -0.158 0.0899 0.368 MAIT L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 7.39e-01 0.0271 0.0811 0.368 MAIT L2
ENSG00000066557 LRRC40 145301 sc-eQTL 5.95e-01 0.05 0.0937 0.364 NK_CD56bright L2
ENSG00000116754 SRSF11 145198 sc-eQTL 5.11e-01 -0.0544 0.0826 0.364 NK_CD56bright L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 3.78e-01 -0.082 0.0928 0.364 NK_CD56bright L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 1.01e-02 -0.216 0.0831 0.364 NK_CD56bright L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 7.16e-01 0.0325 0.0894 0.364 NK_CD56bright L2
ENSG00000066557 LRRC40 145301 sc-eQTL 9.44e-01 0.00557 0.0793 0.373 NK_CD56dim L2
ENSG00000116754 SRSF11 145198 sc-eQTL 2.67e-01 -0.0855 0.0768 0.373 NK_CD56dim L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 3.33e-02 -0.164 0.0764 0.373 NK_CD56dim L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 8.69e-02 -0.13 0.0754 0.373 NK_CD56dim L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 2.57e-01 0.103 0.0908 0.373 NK_CD56dim L2
ENSG00000066557 LRRC40 145301 sc-eQTL 9.52e-01 0.00566 0.0936 0.372 NK_HLA L2
ENSG00000116754 SRSF11 145198 sc-eQTL 7.14e-01 -0.031 0.0844 0.372 NK_HLA L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 6.42e-01 -0.0446 0.0957 0.372 NK_HLA L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 9.04e-01 -0.0113 0.093 0.372 NK_HLA L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 5.06e-02 0.183 0.0929 0.372 NK_HLA L2
ENSG00000066557 LRRC40 145301 sc-eQTL 4.42e-01 -0.0685 0.089 0.373 NK_cytokine L2
ENSG00000116754 SRSF11 145198 sc-eQTL 9.56e-02 -0.127 0.0756 0.373 NK_cytokine L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 9.11e-02 -0.144 0.0848 0.373 NK_cytokine L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 7.23e-01 -0.0281 0.0791 0.373 NK_cytokine L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 7.17e-01 0.0301 0.083 0.373 NK_cytokine L2
ENSG00000066557 LRRC40 145301 sc-eQTL 3.72e-01 0.103 0.115 0.385 PB L2
ENSG00000116754 SRSF11 145198 sc-eQTL 7.75e-01 -0.0297 0.104 0.385 PB L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 5.45e-01 0.0709 0.117 0.385 PB L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 3.79e-01 -0.0726 0.0822 0.385 PB L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 5.40e-01 0.068 0.111 0.385 PB L2
ENSG00000066557 LRRC40 145301 sc-eQTL 8.47e-01 -0.0175 0.0907 0.367 Pro_T L2
ENSG00000116754 SRSF11 145198 sc-eQTL 2.47e-01 -0.0906 0.0781 0.367 Pro_T L2
ENSG00000116761 CTH -60338 sc-eQTL 7.07e-02 0.129 0.0708 0.367 Pro_T L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 3.10e-01 -0.0931 0.0914 0.367 Pro_T L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 1.46e-01 0.128 0.088 0.367 Pro_T L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 2.00e-01 0.116 0.0904 0.367 Pro_T L2
ENSG00000066557 LRRC40 145301 sc-eQTL 4.18e-01 -0.0757 0.0932 0.37 Treg L2
ENSG00000116754 SRSF11 145198 sc-eQTL 6.00e-01 0.041 0.078 0.37 Treg L2
ENSG00000116761 CTH -60338 sc-eQTL 6.40e-03 -0.169 0.0613 0.37 Treg L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 5.42e-01 0.05 0.0819 0.37 Treg L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 4.42e-01 -0.0652 0.0846 0.37 Treg L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 2.59e-01 0.102 0.0903 0.37 Treg L2
ENSG00000066557 LRRC40 145301 sc-eQTL 9.52e-01 0.00535 0.0892 0.368 cDC L2
ENSG00000116754 SRSF11 145198 sc-eQTL 9.66e-01 -0.00284 0.0668 0.368 cDC L2
ENSG00000116761 CTH -60338 sc-eQTL 6.94e-01 -0.0319 0.0809 0.368 cDC L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 8.18e-01 -0.0218 0.0947 0.368 cDC L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 8.33e-01 -0.0196 0.093 0.368 cDC L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 3.03e-01 0.0891 0.0862 0.368 cDC L2
ENSG00000066557 LRRC40 145301 sc-eQTL 7.19e-02 -0.156 0.0861 0.37 cMono_IL1B L2
ENSG00000116754 SRSF11 145198 sc-eQTL 8.92e-01 -0.00781 0.0574 0.37 cMono_IL1B L2
ENSG00000116761 CTH -60338 sc-eQTL 1.16e-01 -0.112 0.0709 0.37 cMono_IL1B L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 2.27e-01 -0.102 0.0842 0.37 cMono_IL1B L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 2.55e-02 -0.169 0.0752 0.37 cMono_IL1B L2
ENSG00000066557 LRRC40 145301 sc-eQTL 2.50e-01 0.107 0.0926 0.37 cMono_S100A L2
ENSG00000116754 SRSF11 145198 sc-eQTL 8.53e-01 0.0123 0.0664 0.37 cMono_S100A L2
ENSG00000116761 CTH -60338 sc-eQTL 9.66e-01 0.00346 0.0807 0.37 cMono_S100A L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 2.24e-01 -0.115 0.0945 0.37 cMono_S100A L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 4.75e-03 -0.226 0.0792 0.37 cMono_S100A L2
ENSG00000066557 LRRC40 145301 sc-eQTL 7.27e-01 0.0386 0.11 0.364 gdT L2
ENSG00000116754 SRSF11 145198 sc-eQTL 1.41e-01 -0.155 0.104 0.364 gdT L2
ENSG00000116761 CTH -60338 sc-eQTL 7.65e-01 -0.0303 0.101 0.364 gdT L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 5.48e-01 0.0659 0.109 0.364 gdT L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 3.88e-02 -0.22 0.105 0.364 gdT L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 4.49e-02 0.204 0.101 0.364 gdT L2
ENSG00000066557 LRRC40 145301 sc-eQTL 7.59e-01 0.028 0.091 0.373 intMono L2
ENSG00000116754 SRSF11 145198 sc-eQTL 4.09e-01 -0.0657 0.0794 0.373 intMono L2
ENSG00000116761 CTH -60338 sc-eQTL 2.26e-01 -0.086 0.0708 0.373 intMono L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 2.39e-01 -0.109 0.0922 0.373 intMono L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 9.62e-01 -0.00444 0.0932 0.373 intMono L2
ENSG00000066557 LRRC40 145301 sc-eQTL 3.36e-01 -0.0886 0.0919 0.364 ncMono L2
ENSG00000116754 SRSF11 145198 sc-eQTL 4.91e-02 -0.139 0.0704 0.364 ncMono L2
ENSG00000116761 CTH -60338 sc-eQTL 5.22e-01 -0.0455 0.0709 0.364 ncMono L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 4.77e-01 -0.057 0.0799 0.364 ncMono L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 9.30e-01 0.00747 0.0846 0.364 ncMono L2
ENSG00000066557 LRRC40 145301 sc-eQTL 3.93e-01 0.0863 0.101 0.376 pDC L2
ENSG00000116754 SRSF11 145198 sc-eQTL 8.54e-02 -0.147 0.0846 0.376 pDC L2
ENSG00000116761 CTH -60338 sc-eQTL 6.40e-02 -0.143 0.0769 0.376 pDC L2
ENSG00000118454 ANKRD13C -3854 sc-eQTL 9.65e-01 0.00446 0.103 0.376 pDC L2
ENSG00000132485 ZRANB2 -730409 sc-eQTL 6.34e-01 -0.0407 0.0853 0.376 pDC L2
ENSG00000197568 HHLA3 -3925 sc-eQTL 4.16e-01 -0.0735 0.0901 0.376 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000066557 LRRC40 145301 sc-eQTL 7.05e-01 -0.0324 0.0853 0.37 B_Memory LOneK1K
ENSG00000116754 SRSF11 145198 sc-eQTL 8.26e-03 -0.196 0.0737 0.37 B_Memory LOneK1K
ENSG00000118454 ANKRD13C -3854 sc-eQTL 1.44e-01 -0.118 0.0802 0.37 B_Memory LOneK1K
ENSG00000132485 ZRANB2 -730409 sc-eQTL 4.05e-01 -0.0678 0.0814 0.37 B_Memory LOneK1K
ENSG00000197568 HHLA3 -3925 sc-eQTL 5.01e-01 0.0596 0.0883 0.37 B_Memory LOneK1K
ENSG00000066557 LRRC40 145301 sc-eQTL 7.74e-01 -0.0244 0.0848 0.37 B_Naive LOneK1K
ENSG00000116754 SRSF11 145198 sc-eQTL 3.42e-04 -0.254 0.0698 0.37 B_Naive LOneK1K
ENSG00000118454 ANKRD13C -3854 sc-eQTL 1.30e-01 -0.11 0.0723 0.37 B_Naive LOneK1K
ENSG00000132485 ZRANB2 -730409 sc-eQTL 7.67e-01 -0.0201 0.0677 0.37 B_Naive LOneK1K
ENSG00000197568 HHLA3 -3925 sc-eQTL 3.35e-03 0.238 0.0801 0.37 B_Naive LOneK1K
ENSG00000066557 LRRC40 145301 sc-eQTL 3.11e-01 -0.0879 0.0866 0.37 CD14_Mono LOneK1K
ENSG00000116754 SRSF11 145198 sc-eQTL 9.34e-01 0.00431 0.0521 0.37 CD14_Mono LOneK1K
ENSG00000116761 CTH -60338 sc-eQTL 1.20e-01 -0.106 0.0681 0.37 CD14_Mono LOneK1K
ENSG00000118454 ANKRD13C -3854 sc-eQTL 8.86e-02 -0.148 0.0866 0.37 CD14_Mono LOneK1K
ENSG00000132485 ZRANB2 -730409 sc-eQTL 1.46e-03 -0.222 0.0689 0.37 CD14_Mono LOneK1K
ENSG00000066557 LRRC40 145301 sc-eQTL 7.26e-01 -0.0306 0.0872 0.371 CD16_Mono LOneK1K
ENSG00000116754 SRSF11 145198 sc-eQTL 9.17e-02 -0.114 0.0671 0.371 CD16_Mono LOneK1K
ENSG00000116761 CTH -60338 sc-eQTL 1.21e-01 -0.102 0.0656 0.371 CD16_Mono LOneK1K
ENSG00000118454 ANKRD13C -3854 sc-eQTL 6.45e-02 -0.151 0.081 0.371 CD16_Mono LOneK1K
ENSG00000132485 ZRANB2 -730409 sc-eQTL 9.44e-01 0.00545 0.0781 0.371 CD16_Mono LOneK1K
ENSG00000066557 LRRC40 145301 sc-eQTL 6.29e-01 -0.0374 0.0773 0.373 NK_CD56dim LOneK1K
ENSG00000116754 SRSF11 145198 sc-eQTL 1.74e-01 -0.0915 0.067 0.373 NK_CD56dim LOneK1K
ENSG00000118454 ANKRD13C -3854 sc-eQTL 4.83e-03 -0.191 0.067 0.373 NK_CD56dim LOneK1K
ENSG00000132485 ZRANB2 -730409 sc-eQTL 8.60e-02 -0.119 0.0689 0.373 NK_CD56dim LOneK1K
ENSG00000197568 HHLA3 -3925 sc-eQTL 1.39e-01 0.123 0.0829 0.373 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000066557 LRRC40 145301 eQTL 0.000177 -0.0576 0.0153 0.0 0.0 0.388
ENSG00000116761 CTH -60338 eQTL 1.03e-17 -0.262 0.03 0.0 0.0 0.388
ENSG00000118454 ANKRD13C -3854 eQTL 0.00159 -0.0387 0.0122 0.0 0.0 0.388
ENSG00000197568 HHLA3 -3925 eQTL 6.16e-05 0.103 0.0256 0.0 0.0 0.388

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000066557 LRRC40 145301 2.2e-05 2.58e-05 5.66e-06 1.24e-05 6.8e-06 1.5e-05 3.46e-05 8.42e-06 3.16e-05 1.57e-05 3.61e-05 1.87e-05 4.4e-05 9.56e-06 6.73e-06 2.04e-05 1.35e-05 2.1e-05 9.37e-06 8.88e-06 1.69e-05 3.27e-05 2.11e-05 7.57e-06 3.13e-05 8.36e-06 2.12e-05 1.57e-05 3.01e-05 1.49e-05 1.47e-05 1.75e-06 5.7e-06 7.18e-06 1.16e-05 5.85e-06 4.3e-06 4.69e-06 3.98e-06 3.88e-06 1.78e-06 3e-05 4.42e-06 5.78e-07 3.2e-06 5.22e-06 7.09e-06 3.55e-06 2.42e-06
ENSG00000116761 CTH -60338 6.68e-05 6.65e-05 1.4e-05 2.69e-05 1.63e-05 3.22e-05 9.05e-05 2.12e-05 8.26e-05 5.52e-05 9.79e-05 4.21e-05 0.000119 2.99e-05 1.94e-05 5.97e-05 3.91e-05 6.48e-05 2.15e-05 1.98e-05 4.71e-05 8.69e-05 6.59e-05 1.99e-05 9.62e-05 2.69e-05 4.92e-05 4.3e-05 7.87e-05 3.28e-05 4.76e-05 5.59e-06 1.1e-05 1.96e-05 2.33e-05 1.29e-05 8.65e-06 1.12e-05 9.77e-06 8.35e-06 3.43e-06 7.38e-05 6.92e-06 1.24e-06 6.84e-06 1.43e-05 1.48e-05 6.73e-06 5.61e-06
ENSG00000118454 ANKRD13C -3854 0.000117 0.000131 4.17e-05 7.6e-05 5.62e-05 6.66e-05 0.000192 5.86e-05 0.000184 0.000149 0.000226 0.000102 0.000225 6.98e-05 4.76e-05 0.000147 8.32e-05 0.000157 5.78e-05 5.7e-05 0.000143 0.000177 0.000157 6.51e-05 0.000226 7.32e-05 0.000116 0.000103 0.000163 9.13e-05 0.000121 2.25e-05 3.31e-05 5.78e-05 6.61e-05 4.26e-05 3.25e-05 3.38e-05 3.8e-05 2.78e-05 2.01e-05 0.000138 1.85e-05 5.27e-06 2.54e-05 4.31e-05 3.74e-05 2.37e-05 1.92e-05
ENSG00000197568 HHLA3 -3925 0.000117 0.000131 4.17e-05 7.6e-05 5.62e-05 6.66e-05 0.000189 5.76e-05 0.000184 0.000149 0.000226 0.000102 0.000225 6.88e-05 4.76e-05 0.000147 8.32e-05 0.000157 5.78e-05 5.7e-05 0.000143 0.000174 0.000157 6.51e-05 0.000226 7.32e-05 0.000116 0.000103 0.000163 9.13e-05 0.000121 2.25e-05 3.31e-05 5.78e-05 6.56e-05 4.26e-05 3.24e-05 3.38e-05 3.8e-05 2.78e-05 2.01e-05 0.000138 1.85e-05 5.23e-06 2.54e-05 4.31e-05 3.74e-05 2.37e-05 1.92e-05