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Genes within 1Mb (chr1:63578386:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -15025 sc-eQTL 3.36e-03 -0.226 0.0763 0.65 B L1
ENSG00000088035 ALG6 210811 sc-eQTL 5.34e-01 0.0502 0.0807 0.65 B L1
ENSG00000116641 DOCK7 890000 sc-eQTL 6.26e-01 -0.0394 0.0807 0.65 B L1
ENSG00000125703 ATG4C 794254 sc-eQTL 8.49e-01 0.0107 0.0561 0.65 B L1
ENSG00000142856 ITGB3BP -15335 sc-eQTL 7.02e-19 -0.725 0.0741 0.65 B L1
ENSG00000203965 EFCAB7 55014 sc-eQTL 3.74e-05 -0.37 0.0879 0.65 B L1
ENSG00000079739 PGM1 -15025 sc-eQTL 3.42e-01 -0.0637 0.0669 0.65 CD4T L1
ENSG00000088035 ALG6 210811 sc-eQTL 9.82e-03 0.19 0.0728 0.65 CD4T L1
ENSG00000116641 DOCK7 890000 sc-eQTL 9.59e-01 -0.0039 0.0749 0.65 CD4T L1
ENSG00000125703 ATG4C 794254 sc-eQTL 9.18e-01 -0.00625 0.0605 0.65 CD4T L1
ENSG00000142856 ITGB3BP -15335 sc-eQTL 8.80e-15 -0.622 0.0744 0.65 CD4T L1
ENSG00000158966 CACHD1 -891743 sc-eQTL 3.22e-01 0.0507 0.0511 0.65 CD4T L1
ENSG00000203965 EFCAB7 55014 sc-eQTL 1.25e-03 -0.246 0.0752 0.65 CD4T L1
ENSG00000079739 PGM1 -15025 sc-eQTL 1.13e-01 -0.116 0.0731 0.65 CD8T L1
ENSG00000088035 ALG6 210811 sc-eQTL 8.74e-01 0.0129 0.0811 0.65 CD8T L1
ENSG00000116641 DOCK7 890000 sc-eQTL 5.87e-01 -0.0447 0.0821 0.65 CD8T L1
ENSG00000125703 ATG4C 794254 sc-eQTL 4.31e-01 0.0615 0.0779 0.65 CD8T L1
ENSG00000142856 ITGB3BP -15335 sc-eQTL 6.12e-14 -0.614 0.0763 0.65 CD8T L1
ENSG00000158966 CACHD1 -891743 sc-eQTL 2.17e-02 0.101 0.0436 0.65 CD8T L1
ENSG00000203965 EFCAB7 55014 sc-eQTL 6.18e-03 -0.236 0.0854 0.65 CD8T L1
ENSG00000079739 PGM1 -15025 sc-eQTL 4.74e-01 0.0582 0.0811 0.655 DC L1
ENSG00000088035 ALG6 210811 sc-eQTL 4.19e-02 0.17 0.083 0.655 DC L1
ENSG00000116641 DOCK7 890000 sc-eQTL 9.84e-01 0.00176 0.0859 0.655 DC L1
ENSG00000125703 ATG4C 794254 sc-eQTL 1.87e-01 -0.0887 0.0669 0.655 DC L1
ENSG00000142856 ITGB3BP -15335 sc-eQTL 4.09e-03 -0.267 0.092 0.655 DC L1
ENSG00000203965 EFCAB7 55014 sc-eQTL 2.93e-03 -0.241 0.08 0.655 DC L1
ENSG00000079739 PGM1 -15025 sc-eQTL 5.82e-01 0.0443 0.0803 0.65 Mono L1
ENSG00000088035 ALG6 210811 sc-eQTL 2.12e-02 0.192 0.0828 0.65 Mono L1
ENSG00000116641 DOCK7 890000 sc-eQTL 2.89e-01 -0.0859 0.0809 0.65 Mono L1
ENSG00000125703 ATG4C 794254 sc-eQTL 5.58e-01 0.0321 0.0548 0.65 Mono L1
ENSG00000142856 ITGB3BP -15335 sc-eQTL 3.80e-06 -0.391 0.0823 0.65 Mono L1
ENSG00000079739 PGM1 -15025 sc-eQTL 5.75e-01 -0.0376 0.067 0.65 NK L1
ENSG00000088035 ALG6 210811 sc-eQTL 1.83e-01 0.105 0.0783 0.65 NK L1
ENSG00000116641 DOCK7 890000 sc-eQTL 8.60e-01 -0.0114 0.0648 0.65 NK L1
ENSG00000125703 ATG4C 794254 sc-eQTL 7.25e-01 -0.0245 0.0695 0.65 NK L1
ENSG00000142856 ITGB3BP -15335 sc-eQTL 7.10e-05 -0.338 0.0833 0.65 NK L1
ENSG00000203965 EFCAB7 55014 sc-eQTL 9.69e-01 -0.00362 0.0939 0.65 NK L1
ENSG00000079739 PGM1 -15025 sc-eQTL 4.88e-01 -0.0539 0.0776 0.65 Other_T L1
ENSG00000088035 ALG6 210811 sc-eQTL 5.28e-01 0.0493 0.078 0.65 Other_T L1
ENSG00000116641 DOCK7 890000 sc-eQTL 6.95e-01 -0.0313 0.0797 0.65 Other_T L1
ENSG00000125703 ATG4C 794254 sc-eQTL 7.84e-02 0.121 0.0685 0.65 Other_T L1
ENSG00000142856 ITGB3BP -15335 sc-eQTL 1.82e-01 -0.0816 0.0609 0.65 Other_T L1
ENSG00000203965 EFCAB7 55014 sc-eQTL 3.49e-01 -0.0884 0.0942 0.65 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -15025 sc-eQTL 4.63e-01 -0.0775 0.105 0.666 B_Activated L2
ENSG00000088035 ALG6 210811 sc-eQTL 6.59e-01 -0.0447 0.101 0.666 B_Activated L2
ENSG00000116641 DOCK7 890000 sc-eQTL 5.18e-01 0.0609 0.094 0.666 B_Activated L2
ENSG00000125703 ATG4C 794254 sc-eQTL 5.30e-01 0.0622 0.0989 0.666 B_Activated L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 1.55e-02 -0.232 0.0951 0.666 B_Activated L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 6.98e-01 0.0356 0.0915 0.666 B_Activated L2
ENSG00000079739 PGM1 -15025 sc-eQTL 7.51e-01 -0.0291 0.0915 0.65 B_Intermediate L2
ENSG00000088035 ALG6 210811 sc-eQTL 8.52e-01 0.0173 0.0929 0.65 B_Intermediate L2
ENSG00000116641 DOCK7 890000 sc-eQTL 5.72e-01 0.0502 0.0887 0.65 B_Intermediate L2
ENSG00000125703 ATG4C 794254 sc-eQTL 3.54e-01 0.0697 0.075 0.65 B_Intermediate L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 1.48e-05 -0.38 0.0856 0.65 B_Intermediate L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 6.33e-03 -0.24 0.0871 0.65 B_Intermediate L2
ENSG00000079739 PGM1 -15025 sc-eQTL 3.14e-02 -0.194 0.0896 0.647 B_Memory L2
ENSG00000088035 ALG6 210811 sc-eQTL 6.47e-01 -0.0422 0.092 0.647 B_Memory L2
ENSG00000116641 DOCK7 890000 sc-eQTL 3.07e-02 -0.186 0.0854 0.647 B_Memory L2
ENSG00000125703 ATG4C 794254 sc-eQTL 4.11e-01 0.0675 0.0819 0.647 B_Memory L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 1.86e-03 -0.289 0.0918 0.647 B_Memory L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 2.46e-02 -0.209 0.0921 0.647 B_Memory L2
ENSG00000079739 PGM1 -15025 sc-eQTL 3.30e-02 -0.196 0.0912 0.65 B_Naive1 L2
ENSG00000088035 ALG6 210811 sc-eQTL 9.51e-01 -0.00565 0.0926 0.65 B_Naive1 L2
ENSG00000116641 DOCK7 890000 sc-eQTL 6.68e-01 0.0381 0.0887 0.65 B_Naive1 L2
ENSG00000125703 ATG4C 794254 sc-eQTL 4.72e-01 -0.0492 0.0682 0.65 B_Naive1 L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 2.90e-13 -0.623 0.0799 0.65 B_Naive1 L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 7.86e-06 -0.423 0.0922 0.65 B_Naive1 L2
ENSG00000079739 PGM1 -15025 sc-eQTL 1.10e-01 -0.144 0.0894 0.648 B_Naive2 L2
ENSG00000088035 ALG6 210811 sc-eQTL 9.36e-01 0.00758 0.0938 0.648 B_Naive2 L2
ENSG00000116641 DOCK7 890000 sc-eQTL 9.40e-01 -0.00676 0.0902 0.648 B_Naive2 L2
ENSG00000125703 ATG4C 794254 sc-eQTL 5.82e-01 0.0478 0.0867 0.648 B_Naive2 L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 1.57e-11 -0.602 0.0844 0.648 B_Naive2 L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 1.14e-01 0.148 0.0931 0.648 B_Naive2 L2
ENSG00000079739 PGM1 -15025 sc-eQTL 8.65e-01 0.0154 0.0907 0.65 CD4_CTL L2
ENSG00000088035 ALG6 210811 sc-eQTL 6.40e-01 -0.0449 0.0958 0.65 CD4_CTL L2
ENSG00000116641 DOCK7 890000 sc-eQTL 9.59e-01 -0.00428 0.0838 0.65 CD4_CTL L2
ENSG00000125703 ATG4C 794254 sc-eQTL 5.95e-01 -0.0461 0.0867 0.65 CD4_CTL L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 2.57e-01 -0.105 0.0925 0.65 CD4_CTL L2
ENSG00000158966 CACHD1 -891743 sc-eQTL 6.84e-01 0.0137 0.0337 0.65 CD4_CTL L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 5.56e-01 -0.052 0.0881 0.65 CD4_CTL L2
ENSG00000079739 PGM1 -15025 sc-eQTL 9.80e-01 -0.00187 0.0755 0.65 CD4_Naive L2
ENSG00000088035 ALG6 210811 sc-eQTL 7.94e-03 0.216 0.0806 0.65 CD4_Naive L2
ENSG00000116641 DOCK7 890000 sc-eQTL 6.75e-01 0.0338 0.0805 0.65 CD4_Naive L2
ENSG00000125703 ATG4C 794254 sc-eQTL 7.84e-01 0.0196 0.0712 0.65 CD4_Naive L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 1.08e-12 -0.585 0.0771 0.65 CD4_Naive L2
ENSG00000158966 CACHD1 -891743 sc-eQTL 2.06e-01 0.0651 0.0513 0.65 CD4_Naive L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 6.82e-02 -0.157 0.0857 0.65 CD4_Naive L2
ENSG00000079739 PGM1 -15025 sc-eQTL 6.45e-02 -0.143 0.0771 0.65 CD4_TCM L2
ENSG00000088035 ALG6 210811 sc-eQTL 8.38e-01 -0.0185 0.0903 0.65 CD4_TCM L2
ENSG00000116641 DOCK7 890000 sc-eQTL 5.23e-01 -0.0511 0.0799 0.65 CD4_TCM L2
ENSG00000125703 ATG4C 794254 sc-eQTL 1.17e-01 -0.122 0.0775 0.65 CD4_TCM L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 1.21e-07 -0.471 0.0859 0.65 CD4_TCM L2
ENSG00000158966 CACHD1 -891743 sc-eQTL 4.83e-02 0.143 0.0721 0.65 CD4_TCM L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 1.56e-04 -0.331 0.0859 0.65 CD4_TCM L2
ENSG00000079739 PGM1 -15025 sc-eQTL 3.49e-01 0.0854 0.0909 0.65 CD4_TEM L2
ENSG00000088035 ALG6 210811 sc-eQTL 5.72e-01 0.0518 0.0915 0.65 CD4_TEM L2
ENSG00000116641 DOCK7 890000 sc-eQTL 4.34e-01 0.0699 0.0891 0.65 CD4_TEM L2
ENSG00000125703 ATG4C 794254 sc-eQTL 6.23e-01 0.0426 0.0866 0.65 CD4_TEM L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 8.76e-04 -0.294 0.0872 0.65 CD4_TEM L2
ENSG00000158966 CACHD1 -891743 sc-eQTL 9.95e-01 0.000333 0.0553 0.65 CD4_TEM L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 1.74e-01 -0.126 0.0923 0.65 CD4_TEM L2
ENSG00000079739 PGM1 -15025 sc-eQTL 8.04e-01 0.0206 0.083 0.65 CD8_CTL L2
ENSG00000088035 ALG6 210811 sc-eQTL 4.51e-01 0.0665 0.0881 0.65 CD8_CTL L2
ENSG00000116641 DOCK7 890000 sc-eQTL 6.64e-01 -0.0364 0.0837 0.65 CD8_CTL L2
ENSG00000125703 ATG4C 794254 sc-eQTL 2.47e-01 0.103 0.0889 0.65 CD8_CTL L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 4.58e-03 -0.261 0.0909 0.65 CD8_CTL L2
ENSG00000158966 CACHD1 -891743 sc-eQTL 3.70e-02 0.0816 0.0389 0.65 CD8_CTL L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 9.57e-01 -0.00513 0.0949 0.65 CD8_CTL L2
ENSG00000079739 PGM1 -15025 sc-eQTL 3.54e-01 -0.0785 0.0844 0.65 CD8_Naive L2
ENSG00000088035 ALG6 210811 sc-eQTL 3.35e-01 0.0844 0.0874 0.65 CD8_Naive L2
ENSG00000116641 DOCK7 890000 sc-eQTL 8.21e-01 0.0205 0.0905 0.65 CD8_Naive L2
ENSG00000125703 ATG4C 794254 sc-eQTL 9.94e-01 0.000679 0.0869 0.65 CD8_Naive L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 5.20e-10 -0.523 0.0803 0.65 CD8_Naive L2
ENSG00000158966 CACHD1 -891743 sc-eQTL 3.73e-02 0.127 0.0604 0.65 CD8_Naive L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 9.51e-03 -0.214 0.0817 0.65 CD8_Naive L2
ENSG00000079739 PGM1 -15025 sc-eQTL 1.26e-01 -0.138 0.0899 0.653 CD8_TCM L2
ENSG00000088035 ALG6 210811 sc-eQTL 1.73e-01 -0.125 0.0911 0.653 CD8_TCM L2
ENSG00000116641 DOCK7 890000 sc-eQTL 9.54e-01 -0.00518 0.0893 0.653 CD8_TCM L2
ENSG00000125703 ATG4C 794254 sc-eQTL 6.29e-01 -0.0442 0.0913 0.653 CD8_TCM L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 7.67e-04 -0.295 0.0862 0.653 CD8_TCM L2
ENSG00000158966 CACHD1 -891743 sc-eQTL 7.32e-01 0.016 0.0466 0.653 CD8_TCM L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 2.80e-01 -0.0977 0.0902 0.653 CD8_TCM L2
ENSG00000079739 PGM1 -15025 sc-eQTL 2.23e-01 -0.114 0.0932 0.642 CD8_TEM L2
ENSG00000088035 ALG6 210811 sc-eQTL 8.13e-01 -0.0222 0.0939 0.642 CD8_TEM L2
ENSG00000116641 DOCK7 890000 sc-eQTL 3.41e-01 -0.0867 0.0908 0.642 CD8_TEM L2
ENSG00000125703 ATG4C 794254 sc-eQTL 1.19e-01 0.136 0.087 0.642 CD8_TEM L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 1.11e-03 -0.305 0.0922 0.642 CD8_TEM L2
ENSG00000158966 CACHD1 -891743 sc-eQTL 6.94e-01 0.0076 0.0193 0.642 CD8_TEM L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 3.63e-01 -0.0836 0.0917 0.642 CD8_TEM L2
ENSG00000079739 PGM1 -15025 sc-eQTL 9.22e-01 0.00878 0.0893 0.649 MAIT L2
ENSG00000088035 ALG6 210811 sc-eQTL 6.27e-01 -0.043 0.0883 0.649 MAIT L2
ENSG00000116641 DOCK7 890000 sc-eQTL 9.62e-01 0.00406 0.0847 0.649 MAIT L2
ENSG00000125703 ATG4C 794254 sc-eQTL 1.04e-01 0.145 0.0887 0.649 MAIT L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 5.79e-03 -0.245 0.0878 0.649 MAIT L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 3.60e-01 -0.0843 0.0919 0.649 MAIT L2
ENSG00000079739 PGM1 -15025 sc-eQTL 9.28e-01 -0.00799 0.0881 0.653 NK_CD56bright L2
ENSG00000088035 ALG6 210811 sc-eQTL 9.36e-02 0.151 0.0897 0.653 NK_CD56bright L2
ENSG00000116641 DOCK7 890000 sc-eQTL 8.94e-01 -0.0104 0.0783 0.653 NK_CD56bright L2
ENSG00000125703 ATG4C 794254 sc-eQTL 8.45e-01 -0.0171 0.0874 0.653 NK_CD56bright L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 5.11e-02 -0.177 0.0902 0.653 NK_CD56bright L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 7.26e-02 -0.161 0.0891 0.653 NK_CD56bright L2
ENSG00000079739 PGM1 -15025 sc-eQTL 8.86e-01 -0.00999 0.0698 0.651 NK_CD56dim L2
ENSG00000088035 ALG6 210811 sc-eQTL 6.80e-01 0.0365 0.0885 0.651 NK_CD56dim L2
ENSG00000116641 DOCK7 890000 sc-eQTL 4.60e-01 -0.057 0.0769 0.651 NK_CD56dim L2
ENSG00000125703 ATG4C 794254 sc-eQTL 1.52e-01 -0.112 0.0778 0.651 NK_CD56dim L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 2.34e-02 -0.201 0.0879 0.651 NK_CD56dim L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 6.44e-01 0.0445 0.0961 0.651 NK_CD56dim L2
ENSG00000079739 PGM1 -15025 sc-eQTL 4.15e-01 -0.0781 0.0956 0.66 NK_HLA L2
ENSG00000088035 ALG6 210811 sc-eQTL 2.97e-01 0.104 0.099 0.66 NK_HLA L2
ENSG00000116641 DOCK7 890000 sc-eQTL 8.10e-01 0.0183 0.0759 0.66 NK_HLA L2
ENSG00000125703 ATG4C 794254 sc-eQTL 8.50e-01 0.0168 0.0883 0.66 NK_HLA L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 2.46e-02 -0.207 0.0916 0.66 NK_HLA L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 6.83e-01 0.0361 0.0883 0.66 NK_HLA L2
ENSG00000079739 PGM1 -15025 sc-eQTL 4.19e-01 0.0613 0.0757 0.651 NK_cytokine L2
ENSG00000088035 ALG6 210811 sc-eQTL 9.53e-01 0.00509 0.0856 0.651 NK_cytokine L2
ENSG00000116641 DOCK7 890000 sc-eQTL 8.92e-01 0.0108 0.0793 0.651 NK_cytokine L2
ENSG00000125703 ATG4C 794254 sc-eQTL 5.23e-01 0.0519 0.0811 0.651 NK_cytokine L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 2.58e-03 -0.251 0.0822 0.651 NK_cytokine L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 2.65e-01 0.0998 0.0893 0.651 NK_cytokine L2
ENSG00000079739 PGM1 -15025 sc-eQTL 1.65e-01 -0.167 0.119 0.644 PB L2
ENSG00000088035 ALG6 210811 sc-eQTL 4.91e-01 0.0871 0.126 0.644 PB L2
ENSG00000116641 DOCK7 890000 sc-eQTL 7.14e-01 0.0496 0.135 0.644 PB L2
ENSG00000125703 ATG4C 794254 sc-eQTL 8.53e-01 0.0219 0.118 0.644 PB L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 8.15e-03 -0.307 0.114 0.644 PB L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 4.93e-03 -0.357 0.125 0.644 PB L2
ENSG00000079739 PGM1 -15025 sc-eQTL 9.89e-02 -0.138 0.083 0.648 Pro_T L2
ENSG00000088035 ALG6 210811 sc-eQTL 6.32e-01 0.0407 0.0849 0.648 Pro_T L2
ENSG00000116641 DOCK7 890000 sc-eQTL 7.36e-02 -0.152 0.0846 0.648 Pro_T L2
ENSG00000125703 ATG4C 794254 sc-eQTL 1.86e-02 -0.175 0.0736 0.648 Pro_T L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 3.10e-04 0.266 0.0725 0.648 Pro_T L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 3.49e-01 0.0815 0.0868 0.648 Pro_T L2
ENSG00000079739 PGM1 -15025 sc-eQTL 3.31e-01 -0.0855 0.0877 0.65 Treg L2
ENSG00000088035 ALG6 210811 sc-eQTL 2.93e-01 0.0989 0.0937 0.65 Treg L2
ENSG00000116641 DOCK7 890000 sc-eQTL 9.85e-01 -0.00163 0.0863 0.65 Treg L2
ENSG00000125703 ATG4C 794254 sc-eQTL 8.35e-02 0.152 0.0875 0.65 Treg L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 2.40e-01 -0.108 0.0919 0.65 Treg L2
ENSG00000158966 CACHD1 -891743 sc-eQTL 1.51e-02 -0.168 0.0687 0.65 Treg L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 1.49e-01 -0.127 0.0878 0.65 Treg L2
ENSG00000079739 PGM1 -15025 sc-eQTL 6.40e-01 -0.0411 0.0877 0.661 cDC L2
ENSG00000088035 ALG6 210811 sc-eQTL 5.36e-01 0.0551 0.0889 0.661 cDC L2
ENSG00000116641 DOCK7 890000 sc-eQTL 9.99e-01 -0.000112 0.0873 0.661 cDC L2
ENSG00000125703 ATG4C 794254 sc-eQTL 9.75e-02 -0.125 0.0753 0.661 cDC L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 3.22e-04 -0.34 0.0927 0.661 cDC L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 4.04e-01 -0.0644 0.0771 0.661 cDC L2
ENSG00000079739 PGM1 -15025 sc-eQTL 4.47e-02 0.166 0.0824 0.65 cMono_IL1B L2
ENSG00000088035 ALG6 210811 sc-eQTL 2.40e-01 0.0977 0.083 0.65 cMono_IL1B L2
ENSG00000116641 DOCK7 890000 sc-eQTL 2.43e-01 -0.102 0.0875 0.65 cMono_IL1B L2
ENSG00000125703 ATG4C 794254 sc-eQTL 9.38e-01 0.00478 0.0617 0.65 cMono_IL1B L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 6.75e-07 -0.423 0.0825 0.65 cMono_IL1B L2
ENSG00000079739 PGM1 -15025 sc-eQTL 5.05e-01 -0.0615 0.0921 0.65 cMono_S100A L2
ENSG00000088035 ALG6 210811 sc-eQTL 1.12e-01 0.148 0.0929 0.65 cMono_S100A L2
ENSG00000116641 DOCK7 890000 sc-eQTL 5.85e-01 0.0474 0.0866 0.65 cMono_S100A L2
ENSG00000125703 ATG4C 794254 sc-eQTL 2.88e-01 0.0797 0.0748 0.65 cMono_S100A L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 1.27e-02 -0.21 0.0834 0.65 cMono_S100A L2
ENSG00000079739 PGM1 -15025 sc-eQTL 9.78e-01 -0.00266 0.0949 0.661 gdT L2
ENSG00000088035 ALG6 210811 sc-eQTL 8.42e-01 0.0203 0.101 0.661 gdT L2
ENSG00000116641 DOCK7 890000 sc-eQTL 8.96e-01 0.013 0.0992 0.661 gdT L2
ENSG00000125703 ATG4C 794254 sc-eQTL 4.34e-01 0.0741 0.0946 0.661 gdT L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 6.04e-01 -0.0523 0.101 0.661 gdT L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 6.77e-01 -0.0413 0.099 0.661 gdT L2
ENSG00000079739 PGM1 -15025 sc-eQTL 1.00e-01 0.152 0.0921 0.651 intMono L2
ENSG00000088035 ALG6 210811 sc-eQTL 8.04e-01 0.0215 0.0864 0.651 intMono L2
ENSG00000116641 DOCK7 890000 sc-eQTL 7.42e-01 0.0291 0.0882 0.651 intMono L2
ENSG00000125703 ATG4C 794254 sc-eQTL 6.57e-01 0.0374 0.0842 0.651 intMono L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 1.23e-03 -0.296 0.0904 0.651 intMono L2
ENSG00000079739 PGM1 -15025 sc-eQTL 5.16e-01 -0.0544 0.0836 0.652 ncMono L2
ENSG00000088035 ALG6 210811 sc-eQTL 6.49e-01 0.0419 0.0919 0.652 ncMono L2
ENSG00000116641 DOCK7 890000 sc-eQTL 1.24e-01 -0.139 0.0899 0.652 ncMono L2
ENSG00000125703 ATG4C 794254 sc-eQTL 5.66e-01 -0.0485 0.0844 0.652 ncMono L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 7.09e-01 -0.033 0.0884 0.652 ncMono L2
ENSG00000079739 PGM1 -15025 sc-eQTL 9.22e-01 -0.00972 0.0997 0.655 pDC L2
ENSG00000088035 ALG6 210811 sc-eQTL 9.64e-02 0.161 0.0962 0.655 pDC L2
ENSG00000116641 DOCK7 890000 sc-eQTL 6.97e-01 -0.0387 0.0991 0.655 pDC L2
ENSG00000125703 ATG4C 794254 sc-eQTL 2.61e-01 0.0999 0.0886 0.655 pDC L2
ENSG00000142856 ITGB3BP -15335 sc-eQTL 2.69e-01 -0.11 0.0995 0.655 pDC L2
ENSG00000203965 EFCAB7 55014 sc-eQTL 4.09e-02 -0.18 0.0872 0.655 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -15025 sc-eQTL 3.22e-02 -0.185 0.0856 0.65 B_Memory LOneK1K
ENSG00000088035 ALG6 210811 sc-eQTL 9.33e-01 -0.00811 0.0957 0.65 B_Memory LOneK1K
ENSG00000116641 DOCK7 890000 sc-eQTL 7.79e-01 -0.0233 0.083 0.65 B_Memory LOneK1K
ENSG00000125703 ATG4C 794254 sc-eQTL 2.88e-01 0.0713 0.067 0.65 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -15335 sc-eQTL 5.01e-08 -0.465 0.0822 0.65 B_Memory LOneK1K
ENSG00000203965 EFCAB7 55014 sc-eQTL 3.70e-04 -0.323 0.0892 0.65 B_Memory LOneK1K
ENSG00000079739 PGM1 -15025 sc-eQTL 8.23e-03 -0.235 0.0881 0.65 B_Naive LOneK1K
ENSG00000088035 ALG6 210811 sc-eQTL 7.86e-01 0.025 0.0922 0.65 B_Naive LOneK1K
ENSG00000116641 DOCK7 890000 sc-eQTL 9.26e-01 -0.00805 0.0861 0.65 B_Naive LOneK1K
ENSG00000125703 ATG4C 794254 sc-eQTL 7.02e-01 -0.0252 0.0657 0.65 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -15335 sc-eQTL 4.06e-19 -0.758 0.0769 0.65 B_Naive LOneK1K
ENSG00000203965 EFCAB7 55014 sc-eQTL 4.52e-03 -0.263 0.0916 0.65 B_Naive LOneK1K
ENSG00000079739 PGM1 -15025 sc-eQTL 3.87e-01 0.0735 0.0847 0.65 CD14_Mono LOneK1K
ENSG00000088035 ALG6 210811 sc-eQTL 6.07e-02 0.154 0.0815 0.65 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 890000 sc-eQTL 3.52e-01 -0.0771 0.0826 0.65 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 794254 sc-eQTL 4.11e-01 0.0471 0.0571 0.65 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -15335 sc-eQTL 1.56e-06 -0.396 0.0801 0.65 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -15025 sc-eQTL 5.58e-01 0.0475 0.081 0.651 CD16_Mono LOneK1K
ENSG00000088035 ALG6 210811 sc-eQTL 3.49e-01 0.0863 0.0919 0.651 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 890000 sc-eQTL 7.85e-01 -0.0248 0.0911 0.651 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 794254 sc-eQTL 3.26e-01 -0.0763 0.0775 0.651 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -15335 sc-eQTL 4.24e-02 -0.182 0.0893 0.651 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -15025 sc-eQTL 7.03e-01 -0.026 0.0681 0.651 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 210811 sc-eQTL 4.55e-01 0.0612 0.0817 0.651 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 890000 sc-eQTL 8.15e-01 -0.0171 0.0733 0.651 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 794254 sc-eQTL 7.38e-01 -0.0245 0.0732 0.651 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -15335 sc-eQTL 1.74e-04 -0.32 0.0838 0.651 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 55014 sc-eQTL 5.54e-01 0.0567 0.0957 0.651 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000088035 ALG6 210811 eQTL 2.67e-11 0.0907 0.0135 0.00168 0.00205 0.358
ENSG00000116652 DLEU2L 31304 eQTL 0.00396 -0.0775 0.0268 0.00195 0.0 0.358
ENSG00000142856 ITGB3BP -15335 eQTL 1.2100000000000002e-37 -0.374 0.0279 0.0015 0.0151 0.358
ENSG00000203965 EFCAB7 55014 eQTL 1.13e-04 -0.0959 0.0247 0.0 0.0 0.358
ENSG00000230798 FOXD3-AS1 253945 eQTL 0.0213 0.0622 0.027 0.0 0.0 0.358

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000088035 ALG6 210811 1.29e-06 1.08e-06 3.03e-07 1.16e-06 2.69e-07 5.92e-07 1.61e-06 3.43e-07 1.32e-06 4.19e-07 1.76e-06 6.61e-07 2.01e-06 2.89e-07 5.5e-07 8.62e-07 8.54e-07 6.96e-07 5.36e-07 6.97e-07 3.87e-07 1.35e-06 8.59e-07 6.2e-07 2.23e-06 3.91e-07 8.75e-07 7.19e-07 1.28e-06 1.34e-06 6.9e-07 7.32e-08 1.94e-07 7.03e-07 5.23e-07 3.94e-07 4.21e-07 1.56e-07 3.18e-07 9.07e-08 2.59e-07 1.62e-06 9.66e-08 2.67e-08 1.85e-07 1.22e-07 2.01e-07 8.96e-08 5.26e-08
ENSG00000142856 ITGB3BP -15335 1.43e-05 1.76e-05 2.63e-06 9.42e-06 2.58e-06 6.82e-06 2.04e-05 2.4e-06 1.45e-05 7.35e-06 1.92e-05 7.68e-06 2.55e-05 6.24e-06 4.83e-06 9.28e-06 8.25e-06 1.23e-05 3.74e-06 3.36e-06 6.98e-06 1.42e-05 1.59e-05 4.78e-06 2.63e-05 5.25e-06 7.54e-06 6.17e-06 1.59e-05 1.49e-05 1.01e-05 1.01e-06 1.3e-06 4.07e-06 6.89e-06 3.41e-06 1.76e-06 2.29e-06 2.7e-06 1.45e-06 1.14e-06 1.93e-05 2.34e-06 2.03e-07 1.33e-06 2.45e-06 2.08e-06 8.55e-07 4.59e-07