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Genes within 1Mb (chr1:63507783:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -85628 sc-eQTL 3.06e-03 0.23 0.0769 0.348 B L1
ENSG00000088035 ALG6 140208 sc-eQTL 3.77e-01 -0.072 0.0812 0.348 B L1
ENSG00000116641 DOCK7 819397 sc-eQTL 5.85e-01 0.0445 0.0813 0.348 B L1
ENSG00000125703 ATG4C 723651 sc-eQTL 8.32e-01 -0.012 0.0565 0.348 B L1
ENSG00000142856 ITGB3BP -85938 sc-eQTL 3.38e-19 0.736 0.0744 0.348 B L1
ENSG00000203965 EFCAB7 -15589 sc-eQTL 1.72e-05 0.388 0.0882 0.348 B L1
ENSG00000079739 PGM1 -85628 sc-eQTL 3.10e-01 0.0685 0.0673 0.348 CD4T L1
ENSG00000088035 ALG6 140208 sc-eQTL 9.15e-03 -0.193 0.0733 0.348 CD4T L1
ENSG00000116641 DOCK7 819397 sc-eQTL 8.97e-01 -0.00975 0.0754 0.348 CD4T L1
ENSG00000125703 ATG4C 723651 sc-eQTL 9.51e-01 -0.00375 0.0609 0.348 CD4T L1
ENSG00000142856 ITGB3BP -85938 sc-eQTL 3.79e-15 0.633 0.0746 0.348 CD4T L1
ENSG00000158966 CACHD1 -962346 sc-eQTL 3.30e-01 -0.0502 0.0514 0.348 CD4T L1
ENSG00000203965 EFCAB7 -15589 sc-eQTL 1.29e-03 0.247 0.0757 0.348 CD4T L1
ENSG00000079739 PGM1 -85628 sc-eQTL 1.31e-01 0.112 0.0736 0.348 CD8T L1
ENSG00000088035 ALG6 140208 sc-eQTL 9.22e-01 -0.00798 0.0816 0.348 CD8T L1
ENSG00000116641 DOCK7 819397 sc-eQTL 5.59e-01 0.0483 0.0826 0.348 CD8T L1
ENSG00000125703 ATG4C 723651 sc-eQTL 4.16e-01 -0.0639 0.0784 0.348 CD8T L1
ENSG00000142856 ITGB3BP -85938 sc-eQTL 3.10e-14 0.624 0.0766 0.348 CD8T L1
ENSG00000158966 CACHD1 -962346 sc-eQTL 2.02e-02 -0.103 0.0439 0.348 CD8T L1
ENSG00000203965 EFCAB7 -15589 sc-eQTL 6.12e-03 0.238 0.086 0.348 CD8T L1
ENSG00000079739 PGM1 -85628 sc-eQTL 4.55e-01 -0.0612 0.0818 0.342 DC L1
ENSG00000088035 ALG6 140208 sc-eQTL 4.91e-02 -0.166 0.0837 0.342 DC L1
ENSG00000116641 DOCK7 819397 sc-eQTL 9.77e-01 0.00255 0.0866 0.342 DC L1
ENSG00000125703 ATG4C 723651 sc-eQTL 1.61e-01 0.0948 0.0675 0.342 DC L1
ENSG00000142856 ITGB3BP -85938 sc-eQTL 3.89e-03 0.271 0.0928 0.342 DC L1
ENSG00000203965 EFCAB7 -15589 sc-eQTL 2.65e-03 0.245 0.0806 0.342 DC L1
ENSG00000079739 PGM1 -85628 sc-eQTL 5.34e-01 -0.0504 0.0809 0.348 Mono L1
ENSG00000088035 ALG6 140208 sc-eQTL 1.71e-02 -0.2 0.0834 0.348 Mono L1
ENSG00000116641 DOCK7 819397 sc-eQTL 2.91e-01 0.0863 0.0815 0.348 Mono L1
ENSG00000125703 ATG4C 723651 sc-eQTL 5.11e-01 -0.0364 0.0552 0.348 Mono L1
ENSG00000142856 ITGB3BP -85938 sc-eQTL 3.04e-06 0.398 0.0829 0.348 Mono L1
ENSG00000079739 PGM1 -85628 sc-eQTL 5.51e-01 0.0403 0.0675 0.348 NK L1
ENSG00000088035 ALG6 140208 sc-eQTL 1.57e-01 -0.112 0.0788 0.348 NK L1
ENSG00000116641 DOCK7 819397 sc-eQTL 9.30e-01 0.0057 0.0652 0.348 NK L1
ENSG00000125703 ATG4C 723651 sc-eQTL 6.75e-01 0.0294 0.07 0.348 NK L1
ENSG00000142856 ITGB3BP -85938 sc-eQTL 4.43e-05 0.349 0.0836 0.348 NK L1
ENSG00000203965 EFCAB7 -15589 sc-eQTL 9.72e-01 0.00333 0.0945 0.348 NK L1
ENSG00000079739 PGM1 -85628 sc-eQTL 5.43e-01 0.0476 0.0782 0.348 Other_T L1
ENSG00000088035 ALG6 140208 sc-eQTL 5.40e-01 -0.0483 0.0785 0.348 Other_T L1
ENSG00000116641 DOCK7 819397 sc-eQTL 6.73e-01 0.0339 0.0802 0.348 Other_T L1
ENSG00000125703 ATG4C 723651 sc-eQTL 5.21e-02 -0.134 0.0688 0.348 Other_T L1
ENSG00000142856 ITGB3BP -85938 sc-eQTL 1.59e-01 0.0866 0.0613 0.348 Other_T L1
ENSG00000203965 EFCAB7 -15589 sc-eQTL 3.40e-01 0.0907 0.0948 0.348 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -85628 sc-eQTL 4.63e-01 0.0775 0.105 0.334 B_Activated L2
ENSG00000088035 ALG6 140208 sc-eQTL 6.59e-01 0.0447 0.101 0.334 B_Activated L2
ENSG00000116641 DOCK7 819397 sc-eQTL 5.18e-01 -0.0609 0.094 0.334 B_Activated L2
ENSG00000125703 ATG4C 723651 sc-eQTL 5.30e-01 -0.0622 0.0989 0.334 B_Activated L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 1.55e-02 0.232 0.0951 0.334 B_Activated L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 6.98e-01 -0.0356 0.0915 0.334 B_Activated L2
ENSG00000079739 PGM1 -85628 sc-eQTL 8.08e-01 0.0225 0.0921 0.348 B_Intermediate L2
ENSG00000088035 ALG6 140208 sc-eQTL 7.85e-01 -0.0256 0.0935 0.348 B_Intermediate L2
ENSG00000116641 DOCK7 819397 sc-eQTL 6.32e-01 -0.0428 0.0893 0.348 B_Intermediate L2
ENSG00000125703 ATG4C 723651 sc-eQTL 3.66e-01 -0.0684 0.0755 0.348 B_Intermediate L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 2.59e-05 0.372 0.0864 0.348 B_Intermediate L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 3.45e-03 0.259 0.0875 0.348 B_Intermediate L2
ENSG00000079739 PGM1 -85628 sc-eQTL 3.03e-02 0.197 0.0902 0.351 B_Memory L2
ENSG00000088035 ALG6 140208 sc-eQTL 7.49e-01 0.0297 0.0927 0.351 B_Memory L2
ENSG00000116641 DOCK7 819397 sc-eQTL 3.50e-02 0.183 0.086 0.351 B_Memory L2
ENSG00000125703 ATG4C 723651 sc-eQTL 4.82e-01 -0.0582 0.0825 0.351 B_Memory L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 1.15e-03 0.304 0.0922 0.351 B_Memory L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 2.03e-02 0.217 0.0927 0.351 B_Memory L2
ENSG00000079739 PGM1 -85628 sc-eQTL 2.70e-02 0.205 0.0919 0.348 B_Naive1 L2
ENSG00000088035 ALG6 140208 sc-eQTL 9.02e-01 -0.0115 0.0933 0.348 B_Naive1 L2
ENSG00000116641 DOCK7 819397 sc-eQTL 7.27e-01 -0.0313 0.0894 0.348 B_Naive1 L2
ENSG00000125703 ATG4C 723651 sc-eQTL 4.39e-01 0.0533 0.0688 0.348 B_Naive1 L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 1.48e-13 0.635 0.0803 0.348 B_Naive1 L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 4.51e-06 0.437 0.0928 0.348 B_Naive1 L2
ENSG00000079739 PGM1 -85628 sc-eQTL 7.75e-02 0.16 0.09 0.35 B_Naive2 L2
ENSG00000088035 ALG6 140208 sc-eQTL 7.86e-01 -0.0257 0.0945 0.35 B_Naive2 L2
ENSG00000116641 DOCK7 819397 sc-eQTL 9.80e-01 -0.00231 0.0909 0.35 B_Naive2 L2
ENSG00000125703 ATG4C 723651 sc-eQTL 4.59e-01 -0.0648 0.0874 0.35 B_Naive2 L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 4.70e-12 0.621 0.0846 0.35 B_Naive2 L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 9.72e-02 -0.156 0.0938 0.35 B_Naive2 L2
ENSG00000079739 PGM1 -85628 sc-eQTL 8.02e-01 -0.0229 0.0913 0.348 CD4_CTL L2
ENSG00000088035 ALG6 140208 sc-eQTL 6.35e-01 0.0459 0.0965 0.348 CD4_CTL L2
ENSG00000116641 DOCK7 819397 sc-eQTL 9.75e-01 -0.00264 0.0844 0.348 CD4_CTL L2
ENSG00000125703 ATG4C 723651 sc-eQTL 5.87e-01 0.0475 0.0873 0.348 CD4_CTL L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 2.24e-01 0.113 0.0931 0.348 CD4_CTL L2
ENSG00000158966 CACHD1 -962346 sc-eQTL 6.76e-01 -0.0142 0.0339 0.348 CD4_CTL L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 7.18e-01 0.0321 0.0887 0.348 CD4_CTL L2
ENSG00000079739 PGM1 -85628 sc-eQTL 9.03e-01 0.00928 0.0759 0.348 CD4_Naive L2
ENSG00000088035 ALG6 140208 sc-eQTL 8.60e-03 -0.215 0.0811 0.348 CD4_Naive L2
ENSG00000116641 DOCK7 819397 sc-eQTL 5.96e-01 -0.043 0.081 0.348 CD4_Naive L2
ENSG00000125703 ATG4C 723651 sc-eQTL 6.93e-01 -0.0283 0.0716 0.348 CD4_Naive L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 6.52e-13 0.593 0.0774 0.348 CD4_Naive L2
ENSG00000158966 CACHD1 -962346 sc-eQTL 2.06e-01 -0.0655 0.0517 0.348 CD4_Naive L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 6.67e-02 0.159 0.0862 0.348 CD4_Naive L2
ENSG00000079739 PGM1 -85628 sc-eQTL 7.01e-02 0.141 0.0776 0.348 CD4_TCM L2
ENSG00000088035 ALG6 140208 sc-eQTL 9.43e-01 0.00648 0.0908 0.348 CD4_TCM L2
ENSG00000116641 DOCK7 819397 sc-eQTL 6.64e-01 0.035 0.0804 0.348 CD4_TCM L2
ENSG00000125703 ATG4C 723651 sc-eQTL 1.40e-01 0.115 0.078 0.348 CD4_TCM L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 8.90e-08 0.478 0.0863 0.348 CD4_TCM L2
ENSG00000158966 CACHD1 -962346 sc-eQTL 6.02e-02 -0.137 0.0726 0.348 CD4_TCM L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 1.56e-04 0.333 0.0864 0.348 CD4_TCM L2
ENSG00000079739 PGM1 -85628 sc-eQTL 4.05e-01 -0.0764 0.0916 0.348 CD4_TEM L2
ENSG00000088035 ALG6 140208 sc-eQTL 4.75e-01 -0.0659 0.0921 0.348 CD4_TEM L2
ENSG00000116641 DOCK7 819397 sc-eQTL 3.91e-01 -0.077 0.0897 0.348 CD4_TEM L2
ENSG00000125703 ATG4C 723651 sc-eQTL 5.48e-01 -0.0524 0.0872 0.348 CD4_TEM L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 8.21e-04 0.298 0.0877 0.348 CD4_TEM L2
ENSG00000158966 CACHD1 -962346 sc-eQTL 9.92e-01 0.000574 0.0557 0.348 CD4_TEM L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 1.67e-01 0.129 0.0929 0.348 CD4_TEM L2
ENSG00000079739 PGM1 -85628 sc-eQTL 7.71e-01 -0.0244 0.0836 0.348 CD8_CTL L2
ENSG00000088035 ALG6 140208 sc-eQTL 4.83e-01 -0.0624 0.0888 0.348 CD8_CTL L2
ENSG00000116641 DOCK7 819397 sc-eQTL 6.67e-01 0.0363 0.0844 0.348 CD8_CTL L2
ENSG00000125703 ATG4C 723651 sc-eQTL 2.78e-01 -0.0973 0.0896 0.348 CD8_CTL L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 3.39e-03 0.271 0.0915 0.348 CD8_CTL L2
ENSG00000158966 CACHD1 -962346 sc-eQTL 3.56e-02 -0.0829 0.0392 0.348 CD8_CTL L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 9.47e-01 0.00633 0.0957 0.348 CD8_CTL L2
ENSG00000079739 PGM1 -85628 sc-eQTL 3.41e-01 0.0812 0.085 0.348 CD8_Naive L2
ENSG00000088035 ALG6 140208 sc-eQTL 3.52e-01 -0.0821 0.088 0.348 CD8_Naive L2
ENSG00000116641 DOCK7 819397 sc-eQTL 8.82e-01 -0.0136 0.0911 0.348 CD8_Naive L2
ENSG00000125703 ATG4C 723651 sc-eQTL 9.29e-01 -0.00785 0.0875 0.348 CD8_Naive L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 3.32e-10 0.532 0.0807 0.348 CD8_Naive L2
ENSG00000158966 CACHD1 -962346 sc-eQTL 3.42e-02 -0.13 0.0608 0.348 CD8_Naive L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 8.60e-03 0.218 0.0821 0.348 CD8_Naive L2
ENSG00000079739 PGM1 -85628 sc-eQTL 1.82e-01 0.122 0.0907 0.345 CD8_TCM L2
ENSG00000088035 ALG6 140208 sc-eQTL 1.21e-01 0.143 0.0917 0.345 CD8_TCM L2
ENSG00000116641 DOCK7 819397 sc-eQTL 8.27e-01 0.0197 0.09 0.345 CD8_TCM L2
ENSG00000125703 ATG4C 723651 sc-eQTL 5.48e-01 0.0554 0.092 0.345 CD8_TCM L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 9.40e-04 0.292 0.0869 0.345 CD8_TCM L2
ENSG00000158966 CACHD1 -962346 sc-eQTL 7.44e-01 -0.0153 0.047 0.345 CD8_TCM L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 2.99e-01 0.0947 0.0909 0.345 CD8_TCM L2
ENSG00000079739 PGM1 -85628 sc-eQTL 2.97e-01 0.0983 0.094 0.356 CD8_TEM L2
ENSG00000088035 ALG6 140208 sc-eQTL 8.45e-01 0.0185 0.0946 0.356 CD8_TEM L2
ENSG00000116641 DOCK7 819397 sc-eQTL 3.71e-01 0.082 0.0916 0.356 CD8_TEM L2
ENSG00000125703 ATG4C 723651 sc-eQTL 9.99e-02 -0.145 0.0876 0.356 CD8_TEM L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 8.72e-04 0.314 0.0928 0.356 CD8_TEM L2
ENSG00000158966 CACHD1 -962346 sc-eQTL 6.59e-01 -0.0086 0.0194 0.356 CD8_TEM L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 3.79e-01 0.0815 0.0924 0.356 CD8_TEM L2
ENSG00000079739 PGM1 -85628 sc-eQTL 9.09e-01 -0.0103 0.0898 0.348 MAIT L2
ENSG00000088035 ALG6 140208 sc-eQTL 6.55e-01 0.0398 0.0889 0.348 MAIT L2
ENSG00000116641 DOCK7 819397 sc-eQTL 9.96e-01 0.000432 0.0852 0.348 MAIT L2
ENSG00000125703 ATG4C 723651 sc-eQTL 8.90e-02 -0.152 0.0892 0.348 MAIT L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 4.30e-03 0.255 0.0883 0.348 MAIT L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 3.61e-01 0.0848 0.0925 0.348 MAIT L2
ENSG00000079739 PGM1 -85628 sc-eQTL 9.50e-01 0.00558 0.0887 0.344 NK_CD56bright L2
ENSG00000088035 ALG6 140208 sc-eQTL 8.81e-02 -0.155 0.0903 0.344 NK_CD56bright L2
ENSG00000116641 DOCK7 819397 sc-eQTL 9.82e-01 0.0018 0.0788 0.344 NK_CD56bright L2
ENSG00000125703 ATG4C 723651 sc-eQTL 8.16e-01 0.0205 0.088 0.344 NK_CD56bright L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 6.14e-02 0.171 0.0909 0.344 NK_CD56bright L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 7.64e-02 0.16 0.0897 0.344 NK_CD56bright L2
ENSG00000079739 PGM1 -85628 sc-eQTL 9.00e-01 0.00881 0.0702 0.347 NK_CD56dim L2
ENSG00000088035 ALG6 140208 sc-eQTL 6.08e-01 -0.0458 0.089 0.347 NK_CD56dim L2
ENSG00000116641 DOCK7 819397 sc-eQTL 4.10e-01 0.0639 0.0774 0.347 NK_CD56dim L2
ENSG00000125703 ATG4C 723651 sc-eQTL 1.26e-01 0.12 0.0783 0.347 NK_CD56dim L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 2.19e-02 0.204 0.0885 0.347 NK_CD56dim L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 6.36e-01 -0.0458 0.0967 0.347 NK_CD56dim L2
ENSG00000079739 PGM1 -85628 sc-eQTL 3.38e-01 0.0924 0.0962 0.338 NK_HLA L2
ENSG00000088035 ALG6 140208 sc-eQTL 3.08e-01 -0.102 0.0998 0.338 NK_HLA L2
ENSG00000116641 DOCK7 819397 sc-eQTL 8.63e-01 -0.0132 0.0765 0.338 NK_HLA L2
ENSG00000125703 ATG4C 723651 sc-eQTL 9.53e-01 -0.00527 0.089 0.338 NK_HLA L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 2.46e-02 0.209 0.0922 0.338 NK_HLA L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 5.74e-01 -0.0501 0.0889 0.338 NK_HLA L2
ENSG00000079739 PGM1 -85628 sc-eQTL 4.08e-01 -0.0632 0.0762 0.347 NK_cytokine L2
ENSG00000088035 ALG6 140208 sc-eQTL 9.55e-01 -0.00489 0.0862 0.347 NK_cytokine L2
ENSG00000116641 DOCK7 819397 sc-eQTL 7.55e-01 -0.025 0.0798 0.347 NK_cytokine L2
ENSG00000125703 ATG4C 723651 sc-eQTL 4.72e-01 -0.0588 0.0816 0.347 NK_cytokine L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 1.31e-03 0.269 0.0825 0.347 NK_cytokine L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 3.07e-01 -0.092 0.0899 0.347 NK_cytokine L2
ENSG00000079739 PGM1 -85628 sc-eQTL 1.65e-01 0.167 0.119 0.356 PB L2
ENSG00000088035 ALG6 140208 sc-eQTL 4.91e-01 -0.0871 0.126 0.356 PB L2
ENSG00000116641 DOCK7 819397 sc-eQTL 7.14e-01 -0.0496 0.135 0.356 PB L2
ENSG00000125703 ATG4C 723651 sc-eQTL 8.53e-01 -0.0219 0.118 0.356 PB L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 8.15e-03 0.307 0.114 0.356 PB L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 4.93e-03 0.357 0.125 0.356 PB L2
ENSG00000079739 PGM1 -85628 sc-eQTL 1.44e-01 0.123 0.0837 0.35 Pro_T L2
ENSG00000088035 ALG6 140208 sc-eQTL 6.56e-01 -0.0382 0.0856 0.35 Pro_T L2
ENSG00000116641 DOCK7 819397 sc-eQTL 7.61e-02 0.152 0.0853 0.35 Pro_T L2
ENSG00000125703 ATG4C 723651 sc-eQTL 5.13e-02 0.146 0.0745 0.35 Pro_T L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 1.41e-04 -0.283 0.0728 0.35 Pro_T L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 4.31e-01 -0.0691 0.0875 0.35 Pro_T L2
ENSG00000079739 PGM1 -85628 sc-eQTL 3.33e-01 0.0858 0.0884 0.348 Treg L2
ENSG00000088035 ALG6 140208 sc-eQTL 3.00e-01 -0.0981 0.0945 0.348 Treg L2
ENSG00000116641 DOCK7 819397 sc-eQTL 9.76e-01 0.00263 0.0869 0.348 Treg L2
ENSG00000125703 ATG4C 723651 sc-eQTL 8.42e-02 -0.153 0.0882 0.348 Treg L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 2.07e-01 0.117 0.0926 0.348 Treg L2
ENSG00000158966 CACHD1 -962346 sc-eQTL 2.20e-02 0.16 0.0694 0.348 Treg L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 1.45e-01 0.129 0.0885 0.348 Treg L2
ENSG00000079739 PGM1 -85628 sc-eQTL 6.85e-01 0.0359 0.0884 0.337 cDC L2
ENSG00000088035 ALG6 140208 sc-eQTL 6.10e-01 -0.0458 0.0897 0.337 cDC L2
ENSG00000116641 DOCK7 819397 sc-eQTL 1.00e+00 4.44e-05 0.0881 0.337 cDC L2
ENSG00000125703 ATG4C 723651 sc-eQTL 7.50e-02 0.136 0.0758 0.337 cDC L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 3.04e-04 0.344 0.0935 0.337 cDC L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 4.62e-01 0.0573 0.0778 0.337 cDC L2
ENSG00000079739 PGM1 -85628 sc-eQTL 4.33e-02 -0.169 0.0831 0.348 cMono_IL1B L2
ENSG00000088035 ALG6 140208 sc-eQTL 2.30e-01 -0.101 0.0837 0.348 cMono_IL1B L2
ENSG00000116641 DOCK7 819397 sc-eQTL 2.31e-01 0.106 0.0882 0.348 cMono_IL1B L2
ENSG00000125703 ATG4C 723651 sc-eQTL 9.44e-01 -0.0044 0.0623 0.348 cMono_IL1B L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 7.56e-07 0.424 0.0832 0.348 cMono_IL1B L2
ENSG00000079739 PGM1 -85628 sc-eQTL 6.29e-01 0.0449 0.0929 0.348 cMono_S100A L2
ENSG00000088035 ALG6 140208 sc-eQTL 8.98e-02 -0.159 0.0936 0.348 cMono_S100A L2
ENSG00000116641 DOCK7 819397 sc-eQTL 6.20e-01 -0.0433 0.0873 0.348 cMono_S100A L2
ENSG00000125703 ATG4C 723651 sc-eQTL 2.24e-01 -0.0919 0.0754 0.348 cMono_S100A L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 1.13e-02 0.215 0.084 0.348 cMono_S100A L2
ENSG00000079739 PGM1 -85628 sc-eQTL 9.98e-01 0.00019 0.0957 0.336 gdT L2
ENSG00000088035 ALG6 140208 sc-eQTL 9.32e-01 -0.00867 0.102 0.336 gdT L2
ENSG00000116641 DOCK7 819397 sc-eQTL 8.00e-01 -0.0255 0.1 0.336 gdT L2
ENSG00000125703 ATG4C 723651 sc-eQTL 3.62e-01 -0.0872 0.0954 0.336 gdT L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 5.14e-01 0.0664 0.101 0.336 gdT L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 7.06e-01 0.0378 0.0999 0.336 gdT L2
ENSG00000079739 PGM1 -85628 sc-eQTL 1.37e-01 -0.139 0.0929 0.347 intMono L2
ENSG00000088035 ALG6 140208 sc-eQTL 7.08e-01 -0.0326 0.0869 0.347 intMono L2
ENSG00000116641 DOCK7 819397 sc-eQTL 7.05e-01 -0.0336 0.0888 0.347 intMono L2
ENSG00000125703 ATG4C 723651 sc-eQTL 7.35e-01 -0.0288 0.0848 0.347 intMono L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 6.80e-04 0.313 0.0908 0.347 intMono L2
ENSG00000079739 PGM1 -85628 sc-eQTL 4.80e-01 0.0596 0.0842 0.346 ncMono L2
ENSG00000088035 ALG6 140208 sc-eQTL 6.57e-01 -0.0411 0.0926 0.346 ncMono L2
ENSG00000116641 DOCK7 819397 sc-eQTL 1.47e-01 0.132 0.0907 0.346 ncMono L2
ENSG00000125703 ATG4C 723651 sc-eQTL 6.25e-01 0.0417 0.0851 0.346 ncMono L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 6.94e-01 0.0351 0.0891 0.346 ncMono L2
ENSG00000079739 PGM1 -85628 sc-eQTL 9.31e-01 0.00868 0.101 0.342 pDC L2
ENSG00000088035 ALG6 140208 sc-eQTL 1.06e-01 -0.158 0.0973 0.342 pDC L2
ENSG00000116641 DOCK7 819397 sc-eQTL 6.34e-01 0.0477 0.1 0.342 pDC L2
ENSG00000125703 ATG4C 723651 sc-eQTL 2.60e-01 -0.101 0.0895 0.342 pDC L2
ENSG00000142856 ITGB3BP -85938 sc-eQTL 2.60e-01 0.114 0.1 0.342 pDC L2
ENSG00000203965 EFCAB7 -15589 sc-eQTL 3.04e-02 0.192 0.0879 0.342 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -85628 sc-eQTL 3.71e-02 0.181 0.0862 0.348 B_Memory LOneK1K
ENSG00000088035 ALG6 140208 sc-eQTL 9.76e-01 -0.00289 0.0963 0.348 B_Memory LOneK1K
ENSG00000116641 DOCK7 819397 sc-eQTL 7.21e-01 0.0299 0.0836 0.348 B_Memory LOneK1K
ENSG00000125703 ATG4C 723651 sc-eQTL 3.30e-01 -0.0658 0.0674 0.348 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -85938 sc-eQTL 5.05e-08 0.468 0.0828 0.348 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -15589 sc-eQTL 2.05e-04 0.339 0.0896 0.348 B_Memory LOneK1K
ENSG00000079739 PGM1 -85628 sc-eQTL 4.82e-03 0.253 0.0886 0.348 B_Naive LOneK1K
ENSG00000088035 ALG6 140208 sc-eQTL 6.18e-01 -0.0465 0.093 0.348 B_Naive LOneK1K
ENSG00000116641 DOCK7 819397 sc-eQTL 9.14e-01 0.00936 0.0868 0.348 B_Naive LOneK1K
ENSG00000125703 ATG4C 723651 sc-eQTL 7.87e-01 0.0179 0.0663 0.348 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -85938 sc-eQTL 8.72e-20 0.776 0.077 0.348 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -15589 sc-eQTL 3.66e-03 0.271 0.0923 0.348 B_Naive LOneK1K
ENSG00000079739 PGM1 -85628 sc-eQTL 3.33e-01 -0.0828 0.0854 0.348 CD14_Mono LOneK1K
ENSG00000088035 ALG6 140208 sc-eQTL 5.08e-02 -0.161 0.0821 0.348 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 819397 sc-eQTL 3.23e-01 0.0825 0.0833 0.348 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 723651 sc-eQTL 3.63e-01 -0.0525 0.0576 0.348 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -85938 sc-eQTL 1.54e-06 0.4 0.0808 0.348 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -85628 sc-eQTL 6.38e-01 -0.0384 0.0816 0.347 CD16_Mono LOneK1K
ENSG00000088035 ALG6 140208 sc-eQTL 3.31e-01 -0.0902 0.0925 0.347 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 819397 sc-eQTL 8.71e-01 0.0149 0.0917 0.347 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 723651 sc-eQTL 3.45e-01 0.0739 0.078 0.347 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -85938 sc-eQTL 3.68e-02 0.189 0.0899 0.347 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -85628 sc-eQTL 6.85e-01 0.0279 0.0686 0.347 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 140208 sc-eQTL 4.08e-01 -0.0682 0.0822 0.347 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 819397 sc-eQTL 8.55e-01 0.0135 0.0738 0.347 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 723651 sc-eQTL 7.01e-01 0.0283 0.0736 0.347 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -85938 sc-eQTL 1.00e-04 0.334 0.0842 0.347 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -15589 sc-eQTL 5.61e-01 -0.0561 0.0963 0.347 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000088035 ALG6 140208 eQTL 2.15e-11 -0.0908 0.0134 0.00185 0.00237 0.358
ENSG00000116652 DLEU2L -39299 eQTL 0.00336 0.0786 0.0267 0.00213 0.00111 0.358
ENSG00000142856 ITGB3BP -85938 eQTL 1.1e-37 0.373 0.0278 0.00144 0.0146 0.358
ENSG00000203965 EFCAB7 -15589 eQTL 1.11e-04 0.0957 0.0247 0.0 0.0 0.358
ENSG00000230798 FOXD3-AS1 183342 eQTL 0.0196 -0.0629 0.0269 0.0 0.0 0.358

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000088035 ALG6 140208 4.68e-06 5.1e-06 8.35e-07 3.17e-06 1.64e-06 1.66e-06 4.87e-06 1.09e-06 4.9e-06 2.91e-06 6.19e-06 3.3e-06 7.51e-06 2.06e-06 1.31e-06 3.81e-06 1.86e-06 3.55e-06 1.57e-06 1.15e-06 3.09e-06 4.89e-06 4.37e-06 1.36e-06 6.86e-06 1.93e-06 2.35e-06 1.75e-06 4.45e-06 4.18e-06 2.79e-06 4.91e-07 5.29e-07 1.86e-06 2.09e-06 9.21e-07 9.76e-07 4.4e-07 9.42e-07 5e-07 4.42e-07 5.6e-06 4.55e-07 1.55e-07 4.86e-07 1.14e-06 9.78e-07 6.29e-07 3.29e-07
ENSG00000142856 ITGB3BP -85938 7.78e-06 9.82e-06 1.23e-06 4.96e-06 2.16e-06 3.97e-06 1e-05 2.19e-06 9.4e-06 4.92e-06 1.24e-05 5.31e-06 1.44e-05 3.86e-06 2.37e-06 6.35e-06 4.08e-06 5.9e-06 2.53e-06 2.77e-06 4.66e-06 8.66e-06 6.98e-06 2.83e-06 1.29e-05 3.22e-06 4.74e-06 3.66e-06 8.37e-06 7.78e-06 5.4e-06 7.91e-07 1.14e-06 2.78e-06 3.88e-06 2.07e-06 1.72e-06 1.85e-06 1.61e-06 1.02e-06 8.61e-07 1.2e-05 1.37e-06 1.35e-07 7.64e-07 1.68e-06 1.09e-06 7.51e-07 4.44e-07