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Genes within 1Mb (chr1:63488631:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -104780 sc-eQTL 2.64e-03 0.235 0.0772 0.35 B L1
ENSG00000088035 ALG6 121056 sc-eQTL 3.54e-01 -0.0758 0.0816 0.35 B L1
ENSG00000116641 DOCK7 800245 sc-eQTL 5.49e-01 0.049 0.0817 0.35 B L1
ENSG00000125703 ATG4C 704499 sc-eQTL 9.30e-01 -0.00502 0.0568 0.35 B L1
ENSG00000142856 ITGB3BP -105090 sc-eQTL 5.96e-19 0.735 0.0749 0.35 B L1
ENSG00000203965 EFCAB7 -34741 sc-eQTL 2.67e-05 0.381 0.0888 0.35 B L1
ENSG00000079739 PGM1 -104780 sc-eQTL 3.97e-01 0.0574 0.0676 0.35 CD4T L1
ENSG00000088035 ALG6 121056 sc-eQTL 9.84e-03 -0.192 0.0736 0.35 CD4T L1
ENSG00000116641 DOCK7 800245 sc-eQTL 9.43e-01 -0.00541 0.0757 0.35 CD4T L1
ENSG00000125703 ATG4C 704499 sc-eQTL 9.54e-01 -0.00356 0.0611 0.35 CD4T L1
ENSG00000142856 ITGB3BP -105090 sc-eQTL 1.46e-14 0.624 0.0754 0.35 CD4T L1
ENSG00000158966 CACHD1 -981498 sc-eQTL 3.03e-01 -0.0533 0.0516 0.35 CD4T L1
ENSG00000203965 EFCAB7 -34741 sc-eQTL 1.83e-03 0.24 0.0761 0.35 CD4T L1
ENSG00000079739 PGM1 -104780 sc-eQTL 1.64e-01 0.103 0.074 0.35 CD8T L1
ENSG00000088035 ALG6 121056 sc-eQTL 9.14e-01 -0.00883 0.0819 0.35 CD8T L1
ENSG00000116641 DOCK7 800245 sc-eQTL 5.48e-01 0.0499 0.0829 0.35 CD8T L1
ENSG00000125703 ATG4C 704499 sc-eQTL 4.41e-01 -0.0608 0.0787 0.35 CD8T L1
ENSG00000142856 ITGB3BP -105090 sc-eQTL 5.89e-14 0.621 0.0771 0.35 CD8T L1
ENSG00000158966 CACHD1 -981498 sc-eQTL 1.67e-02 -0.106 0.044 0.35 CD8T L1
ENSG00000203965 EFCAB7 -34741 sc-eQTL 6.37e-03 0.238 0.0863 0.35 CD8T L1
ENSG00000079739 PGM1 -104780 sc-eQTL 4.20e-01 -0.0662 0.082 0.345 DC L1
ENSG00000088035 ALG6 121056 sc-eQTL 4.46e-02 -0.17 0.0839 0.345 DC L1
ENSG00000116641 DOCK7 800245 sc-eQTL 9.88e-01 -0.00136 0.0868 0.345 DC L1
ENSG00000125703 ATG4C 704499 sc-eQTL 1.73e-01 0.0924 0.0676 0.345 DC L1
ENSG00000142856 ITGB3BP -105090 sc-eQTL 4.81e-03 0.265 0.0931 0.345 DC L1
ENSG00000203965 EFCAB7 -34741 sc-eQTL 3.60e-03 0.238 0.0809 0.345 DC L1
ENSG00000079739 PGM1 -104780 sc-eQTL 4.44e-01 -0.0624 0.0814 0.35 Mono L1
ENSG00000088035 ALG6 121056 sc-eQTL 1.77e-02 -0.201 0.084 0.35 Mono L1
ENSG00000116641 DOCK7 800245 sc-eQTL 3.11e-01 0.0833 0.0821 0.35 Mono L1
ENSG00000125703 ATG4C 704499 sc-eQTL 5.37e-01 -0.0343 0.0556 0.35 Mono L1
ENSG00000142856 ITGB3BP -105090 sc-eQTL 4.34e-06 0.394 0.0836 0.35 Mono L1
ENSG00000079739 PGM1 -104780 sc-eQTL 5.50e-01 0.0406 0.0678 0.35 NK L1
ENSG00000088035 ALG6 121056 sc-eQTL 1.89e-01 -0.105 0.0793 0.35 NK L1
ENSG00000116641 DOCK7 800245 sc-eQTL 8.70e-01 0.0107 0.0655 0.35 NK L1
ENSG00000125703 ATG4C 704499 sc-eQTL 6.28e-01 0.0341 0.0704 0.35 NK L1
ENSG00000142856 ITGB3BP -105090 sc-eQTL 5.12e-05 0.348 0.0841 0.35 NK L1
ENSG00000203965 EFCAB7 -34741 sc-eQTL 9.47e-01 0.0063 0.095 0.35 NK L1
ENSG00000079739 PGM1 -104780 sc-eQTL 6.23e-01 0.0386 0.0783 0.35 Other_T L1
ENSG00000088035 ALG6 121056 sc-eQTL 5.29e-01 -0.0496 0.0786 0.35 Other_T L1
ENSG00000116641 DOCK7 800245 sc-eQTL 5.59e-01 0.047 0.0803 0.35 Other_T L1
ENSG00000125703 ATG4C 704499 sc-eQTL 3.81e-02 -0.144 0.0689 0.35 Other_T L1
ENSG00000142856 ITGB3BP -105090 sc-eQTL 1.45e-01 0.0898 0.0614 0.35 Other_T L1
ENSG00000203965 EFCAB7 -34741 sc-eQTL 2.56e-01 0.108 0.0949 0.35 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -104780 sc-eQTL 5.47e-01 0.0636 0.105 0.337 B_Activated L2
ENSG00000088035 ALG6 121056 sc-eQTL 7.09e-01 0.0377 0.101 0.337 B_Activated L2
ENSG00000116641 DOCK7 800245 sc-eQTL 5.19e-01 -0.0608 0.094 0.337 B_Activated L2
ENSG00000125703 ATG4C 704499 sc-eQTL 5.84e-01 -0.0542 0.0989 0.337 B_Activated L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 1.77e-02 0.228 0.0952 0.337 B_Activated L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 6.87e-01 -0.0369 0.0915 0.337 B_Activated L2
ENSG00000079739 PGM1 -104780 sc-eQTL 7.97e-01 0.0238 0.0925 0.35 B_Intermediate L2
ENSG00000088035 ALG6 121056 sc-eQTL 7.51e-01 -0.0298 0.0939 0.35 B_Intermediate L2
ENSG00000116641 DOCK7 800245 sc-eQTL 6.34e-01 -0.0428 0.0897 0.35 B_Intermediate L2
ENSG00000125703 ATG4C 704499 sc-eQTL 3.43e-01 -0.072 0.0758 0.35 B_Intermediate L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 3.03e-05 0.37 0.0868 0.35 B_Intermediate L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 2.67e-03 0.267 0.0877 0.35 B_Intermediate L2
ENSG00000079739 PGM1 -104780 sc-eQTL 3.43e-02 0.192 0.0903 0.353 B_Memory L2
ENSG00000088035 ALG6 121056 sc-eQTL 7.71e-01 0.0271 0.0928 0.353 B_Memory L2
ENSG00000116641 DOCK7 800245 sc-eQTL 3.25e-02 0.185 0.0861 0.353 B_Memory L2
ENSG00000125703 ATG4C 704499 sc-eQTL 5.10e-01 -0.0545 0.0826 0.353 B_Memory L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 1.53e-03 0.297 0.0924 0.353 B_Memory L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 2.11e-02 0.216 0.0928 0.353 B_Memory L2
ENSG00000079739 PGM1 -104780 sc-eQTL 2.57e-02 0.208 0.0925 0.35 B_Naive1 L2
ENSG00000088035 ALG6 121056 sc-eQTL 8.37e-01 -0.0194 0.094 0.35 B_Naive1 L2
ENSG00000116641 DOCK7 800245 sc-eQTL 6.81e-01 -0.0371 0.09 0.35 B_Naive1 L2
ENSG00000125703 ATG4C 704499 sc-eQTL 2.89e-01 0.0736 0.0692 0.35 B_Naive1 L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 1.83e-13 0.637 0.0809 0.35 B_Naive1 L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 8.55e-06 0.427 0.0936 0.35 B_Naive1 L2
ENSG00000079739 PGM1 -104780 sc-eQTL 6.87e-02 0.165 0.0903 0.352 B_Naive2 L2
ENSG00000088035 ALG6 121056 sc-eQTL 7.94e-01 -0.0248 0.0949 0.352 B_Naive2 L2
ENSG00000116641 DOCK7 800245 sc-eQTL 9.78e-01 0.00256 0.0913 0.352 B_Naive2 L2
ENSG00000125703 ATG4C 704499 sc-eQTL 4.43e-01 -0.0675 0.0877 0.352 B_Naive2 L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 8.60e-12 0.617 0.0852 0.352 B_Naive2 L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 7.44e-02 -0.169 0.0941 0.352 B_Naive2 L2
ENSG00000079739 PGM1 -104780 sc-eQTL 8.28e-01 -0.0199 0.0915 0.35 CD4_CTL L2
ENSG00000088035 ALG6 121056 sc-eQTL 6.47e-01 0.0444 0.0967 0.35 CD4_CTL L2
ENSG00000116641 DOCK7 800245 sc-eQTL 9.87e-01 0.00142 0.0846 0.35 CD4_CTL L2
ENSG00000125703 ATG4C 704499 sc-eQTL 6.45e-01 0.0404 0.0875 0.35 CD4_CTL L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 2.56e-01 0.106 0.0933 0.35 CD4_CTL L2
ENSG00000158966 CACHD1 -981498 sc-eQTL 6.82e-01 -0.0139 0.034 0.35 CD4_CTL L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 6.64e-01 0.0386 0.0889 0.35 CD4_CTL L2
ENSG00000079739 PGM1 -104780 sc-eQTL 9.76e-01 -0.00228 0.0763 0.35 CD4_Naive L2
ENSG00000088035 ALG6 121056 sc-eQTL 9.25e-03 -0.214 0.0815 0.35 CD4_Naive L2
ENSG00000116641 DOCK7 800245 sc-eQTL 6.07e-01 -0.0419 0.0814 0.35 CD4_Naive L2
ENSG00000125703 ATG4C 704499 sc-eQTL 6.28e-01 -0.0349 0.0719 0.35 CD4_Naive L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 1.40e-12 0.588 0.0781 0.35 CD4_Naive L2
ENSG00000158966 CACHD1 -981498 sc-eQTL 1.88e-01 -0.0685 0.0519 0.35 CD4_Naive L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 8.56e-02 0.15 0.0867 0.35 CD4_Naive L2
ENSG00000079739 PGM1 -104780 sc-eQTL 8.23e-02 0.136 0.0779 0.35 CD4_TCM L2
ENSG00000088035 ALG6 121056 sc-eQTL 9.12e-01 0.0101 0.0912 0.35 CD4_TCM L2
ENSG00000116641 DOCK7 800245 sc-eQTL 5.93e-01 0.0432 0.0807 0.35 CD4_TCM L2
ENSG00000125703 ATG4C 704499 sc-eQTL 1.39e-01 0.116 0.0783 0.35 CD4_TCM L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 1.19e-07 0.476 0.0867 0.35 CD4_TCM L2
ENSG00000158966 CACHD1 -981498 sc-eQTL 5.07e-02 -0.143 0.0728 0.35 CD4_TCM L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 2.60e-04 0.323 0.0869 0.35 CD4_TCM L2
ENSG00000079739 PGM1 -104780 sc-eQTL 3.82e-01 -0.0805 0.0919 0.35 CD4_TEM L2
ENSG00000088035 ALG6 121056 sc-eQTL 5.15e-01 -0.0603 0.0924 0.35 CD4_TEM L2
ENSG00000116641 DOCK7 800245 sc-eQTL 4.08e-01 -0.0747 0.0901 0.35 CD4_TEM L2
ENSG00000125703 ATG4C 704499 sc-eQTL 6.94e-01 -0.0346 0.0876 0.35 CD4_TEM L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 1.17e-03 0.29 0.0882 0.35 CD4_TEM L2
ENSG00000158966 CACHD1 -981498 sc-eQTL 9.31e-01 -0.00485 0.0559 0.35 CD4_TEM L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 1.88e-01 0.123 0.0933 0.35 CD4_TEM L2
ENSG00000079739 PGM1 -104780 sc-eQTL 7.60e-01 -0.0257 0.084 0.35 CD8_CTL L2
ENSG00000088035 ALG6 121056 sc-eQTL 4.65e-01 -0.0653 0.0892 0.35 CD8_CTL L2
ENSG00000116641 DOCK7 800245 sc-eQTL 5.89e-01 0.0459 0.0847 0.35 CD8_CTL L2
ENSG00000125703 ATG4C 704499 sc-eQTL 3.32e-01 -0.0875 0.09 0.35 CD8_CTL L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 4.42e-03 0.265 0.092 0.35 CD8_CTL L2
ENSG00000158966 CACHD1 -981498 sc-eQTL 3.37e-02 -0.0841 0.0393 0.35 CD8_CTL L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 9.49e-01 0.0062 0.0961 0.35 CD8_CTL L2
ENSG00000079739 PGM1 -104780 sc-eQTL 3.99e-01 0.0721 0.0853 0.35 CD8_Naive L2
ENSG00000088035 ALG6 121056 sc-eQTL 4.05e-01 -0.0737 0.0883 0.35 CD8_Naive L2
ENSG00000116641 DOCK7 800245 sc-eQTL 8.18e-01 -0.0211 0.0914 0.35 CD8_Naive L2
ENSG00000125703 ATG4C 704499 sc-eQTL 8.91e-01 -0.0121 0.0877 0.35 CD8_Naive L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 5.70e-10 0.527 0.0811 0.35 CD8_Naive L2
ENSG00000158966 CACHD1 -981498 sc-eQTL 2.99e-02 -0.133 0.0609 0.35 CD8_Naive L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 7.89e-03 0.221 0.0824 0.35 CD8_Naive L2
ENSG00000079739 PGM1 -104780 sc-eQTL 2.21e-01 0.112 0.0911 0.347 CD8_TCM L2
ENSG00000088035 ALG6 121056 sc-eQTL 1.26e-01 0.141 0.0921 0.347 CD8_TCM L2
ENSG00000116641 DOCK7 800245 sc-eQTL 7.03e-01 0.0345 0.0904 0.347 CD8_TCM L2
ENSG00000125703 ATG4C 704499 sc-eQTL 5.76e-01 0.0518 0.0924 0.347 CD8_TCM L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 5.89e-04 0.304 0.0871 0.347 CD8_TCM L2
ENSG00000158966 CACHD1 -981498 sc-eQTL 7.54e-01 -0.0148 0.0472 0.347 CD8_TCM L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 2.97e-01 0.0954 0.0913 0.347 CD8_TCM L2
ENSG00000079739 PGM1 -104780 sc-eQTL 3.30e-01 0.0922 0.0944 0.358 CD8_TEM L2
ENSG00000088035 ALG6 121056 sc-eQTL 9.25e-01 0.0089 0.095 0.358 CD8_TEM L2
ENSG00000116641 DOCK7 800245 sc-eQTL 3.51e-01 0.0859 0.0918 0.358 CD8_TEM L2
ENSG00000125703 ATG4C 704499 sc-eQTL 7.09e-02 -0.159 0.0878 0.358 CD8_TEM L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 9.33e-04 0.313 0.0931 0.358 CD8_TEM L2
ENSG00000158966 CACHD1 -981498 sc-eQTL 6.44e-01 -0.00904 0.0195 0.358 CD8_TEM L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 3.94e-01 0.0792 0.0927 0.358 CD8_TEM L2
ENSG00000079739 PGM1 -104780 sc-eQTL 8.13e-01 -0.0213 0.09 0.351 MAIT L2
ENSG00000088035 ALG6 121056 sc-eQTL 6.93e-01 0.0352 0.089 0.351 MAIT L2
ENSG00000116641 DOCK7 800245 sc-eQTL 9.87e-01 0.00138 0.0853 0.351 MAIT L2
ENSG00000125703 ATG4C 704499 sc-eQTL 7.16e-02 -0.162 0.0893 0.351 MAIT L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 5.15e-03 0.25 0.0885 0.351 MAIT L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 2.97e-01 0.0967 0.0926 0.351 MAIT L2
ENSG00000079739 PGM1 -104780 sc-eQTL 9.08e-01 0.0103 0.089 0.347 NK_CD56bright L2
ENSG00000088035 ALG6 121056 sc-eQTL 8.58e-02 -0.156 0.0906 0.347 NK_CD56bright L2
ENSG00000116641 DOCK7 800245 sc-eQTL 9.86e-01 0.00143 0.079 0.347 NK_CD56bright L2
ENSG00000125703 ATG4C 704499 sc-eQTL 7.96e-01 0.0229 0.0883 0.347 NK_CD56bright L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 4.92e-02 0.18 0.0911 0.347 NK_CD56bright L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 6.20e-02 0.169 0.0899 0.347 NK_CD56bright L2
ENSG00000079739 PGM1 -104780 sc-eQTL 8.53e-01 0.0131 0.0706 0.349 NK_CD56dim L2
ENSG00000088035 ALG6 121056 sc-eQTL 6.63e-01 -0.0391 0.0895 0.349 NK_CD56dim L2
ENSG00000116641 DOCK7 800245 sc-eQTL 3.83e-01 0.068 0.0778 0.349 NK_CD56dim L2
ENSG00000125703 ATG4C 704499 sc-eQTL 1.24e-01 0.122 0.0787 0.349 NK_CD56dim L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 2.76e-02 0.198 0.0891 0.349 NK_CD56dim L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 6.72e-01 -0.0412 0.0973 0.349 NK_CD56dim L2
ENSG00000079739 PGM1 -104780 sc-eQTL 4.05e-01 0.0807 0.0966 0.34 NK_HLA L2
ENSG00000088035 ALG6 121056 sc-eQTL 2.81e-01 -0.108 0.1 0.34 NK_HLA L2
ENSG00000116641 DOCK7 800245 sc-eQTL 8.19e-01 -0.0176 0.0767 0.34 NK_HLA L2
ENSG00000125703 ATG4C 704499 sc-eQTL 9.35e-01 -0.0073 0.0892 0.34 NK_HLA L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 3.13e-02 0.201 0.0926 0.34 NK_HLA L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 6.10e-01 -0.0455 0.0892 0.34 NK_HLA L2
ENSG00000079739 PGM1 -104780 sc-eQTL 3.71e-01 -0.0685 0.0764 0.349 NK_cytokine L2
ENSG00000088035 ALG6 121056 sc-eQTL 9.69e-01 -0.00338 0.0865 0.349 NK_cytokine L2
ENSG00000116641 DOCK7 800245 sc-eQTL 7.59e-01 -0.0246 0.0801 0.349 NK_cytokine L2
ENSG00000125703 ATG4C 704499 sc-eQTL 5.03e-01 -0.055 0.0819 0.349 NK_cytokine L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 1.06e-03 0.275 0.0827 0.349 NK_cytokine L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 3.00e-01 -0.0937 0.0902 0.349 NK_cytokine L2
ENSG00000079739 PGM1 -104780 sc-eQTL 2.18e-01 0.148 0.119 0.359 PB L2
ENSG00000088035 ALG6 121056 sc-eQTL 3.90e-01 -0.108 0.126 0.359 PB L2
ENSG00000116641 DOCK7 800245 sc-eQTL 5.95e-01 -0.0718 0.134 0.359 PB L2
ENSG00000125703 ATG4C 704499 sc-eQTL 8.31e-01 -0.0251 0.117 0.359 PB L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 3.98e-03 0.332 0.113 0.359 PB L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 6.21e-03 0.347 0.124 0.359 PB L2
ENSG00000079739 PGM1 -104780 sc-eQTL 1.48e-01 0.122 0.0838 0.352 Pro_T L2
ENSG00000088035 ALG6 121056 sc-eQTL 7.50e-01 -0.0273 0.0857 0.352 Pro_T L2
ENSG00000116641 DOCK7 800245 sc-eQTL 6.25e-02 0.16 0.0853 0.352 Pro_T L2
ENSG00000125703 ATG4C 704499 sc-eQTL 6.51e-02 0.138 0.0747 0.352 Pro_T L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 1.84e-04 -0.278 0.073 0.352 Pro_T L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 5.30e-01 -0.0551 0.0876 0.352 Pro_T L2
ENSG00000079739 PGM1 -104780 sc-eQTL 4.07e-01 0.0737 0.0887 0.35 Treg L2
ENSG00000088035 ALG6 121056 sc-eQTL 3.10e-01 -0.0964 0.0948 0.35 Treg L2
ENSG00000116641 DOCK7 800245 sc-eQTL 8.79e-01 0.0133 0.0872 0.35 Treg L2
ENSG00000125703 ATG4C 704499 sc-eQTL 7.59e-02 -0.158 0.0884 0.35 Treg L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 2.33e-01 0.111 0.0929 0.35 Treg L2
ENSG00000158966 CACHD1 -981498 sc-eQTL 2.99e-02 0.152 0.0697 0.35 Treg L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 1.05e-01 0.144 0.0886 0.35 Treg L2
ENSG00000079739 PGM1 -104780 sc-eQTL 6.82e-01 0.0364 0.0887 0.339 cDC L2
ENSG00000088035 ALG6 121056 sc-eQTL 6.25e-01 -0.044 0.0899 0.339 cDC L2
ENSG00000116641 DOCK7 800245 sc-eQTL 9.88e-01 -0.00128 0.0883 0.339 cDC L2
ENSG00000125703 ATG4C 704499 sc-eQTL 7.23e-02 0.137 0.076 0.339 cDC L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 3.43e-04 0.342 0.0938 0.339 cDC L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 5.07e-01 0.0518 0.078 0.339 cDC L2
ENSG00000079739 PGM1 -104780 sc-eQTL 3.24e-02 -0.18 0.0835 0.35 cMono_IL1B L2
ENSG00000088035 ALG6 121056 sc-eQTL 2.46e-01 -0.0979 0.0842 0.35 cMono_IL1B L2
ENSG00000116641 DOCK7 800245 sc-eQTL 2.40e-01 0.105 0.0888 0.35 cMono_IL1B L2
ENSG00000125703 ATG4C 704499 sc-eQTL 9.73e-01 -0.00213 0.0626 0.35 cMono_IL1B L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 9.70e-07 0.423 0.0838 0.35 cMono_IL1B L2
ENSG00000079739 PGM1 -104780 sc-eQTL 6.14e-01 0.0473 0.0935 0.35 cMono_S100A L2
ENSG00000088035 ALG6 121056 sc-eQTL 7.73e-02 -0.167 0.0942 0.35 cMono_S100A L2
ENSG00000116641 DOCK7 800245 sc-eQTL 6.26e-01 -0.0429 0.0879 0.35 cMono_S100A L2
ENSG00000125703 ATG4C 704499 sc-eQTL 2.57e-01 -0.0862 0.0759 0.35 cMono_S100A L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 1.32e-02 0.212 0.0847 0.35 cMono_S100A L2
ENSG00000079739 PGM1 -104780 sc-eQTL 8.56e-01 -0.0175 0.0961 0.339 gdT L2
ENSG00000088035 ALG6 121056 sc-eQTL 8.42e-01 -0.0205 0.102 0.339 gdT L2
ENSG00000116641 DOCK7 800245 sc-eQTL 9.52e-01 -0.00607 0.1 0.339 gdT L2
ENSG00000125703 ATG4C 704499 sc-eQTL 3.12e-01 -0.097 0.0957 0.339 gdT L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 5.70e-01 0.058 0.102 0.339 gdT L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 6.75e-01 0.0421 0.1 0.339 gdT L2
ENSG00000079739 PGM1 -104780 sc-eQTL 1.27e-01 -0.143 0.0933 0.349 intMono L2
ENSG00000088035 ALG6 121056 sc-eQTL 7.57e-01 -0.0271 0.0874 0.349 intMono L2
ENSG00000116641 DOCK7 800245 sc-eQTL 6.08e-01 -0.0458 0.0892 0.349 intMono L2
ENSG00000125703 ATG4C 704499 sc-eQTL 7.00e-01 -0.0329 0.0852 0.349 intMono L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 6.51e-04 0.316 0.0912 0.349 intMono L2
ENSG00000079739 PGM1 -104780 sc-eQTL 4.71e-01 0.0612 0.0846 0.348 ncMono L2
ENSG00000088035 ALG6 121056 sc-eQTL 6.84e-01 -0.0379 0.0931 0.348 ncMono L2
ENSG00000116641 DOCK7 800245 sc-eQTL 1.75e-01 0.124 0.0912 0.348 ncMono L2
ENSG00000125703 ATG4C 704499 sc-eQTL 6.41e-01 0.0399 0.0855 0.348 ncMono L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 7.11e-01 0.0332 0.0895 0.348 ncMono L2
ENSG00000079739 PGM1 -104780 sc-eQTL 9.88e-01 -0.00148 0.101 0.345 pDC L2
ENSG00000088035 ALG6 121056 sc-eQTL 8.73e-02 -0.167 0.0972 0.345 pDC L2
ENSG00000116641 DOCK7 800245 sc-eQTL 7.26e-01 0.0352 0.1 0.345 pDC L2
ENSG00000125703 ATG4C 704499 sc-eQTL 2.01e-01 -0.115 0.0895 0.345 pDC L2
ENSG00000142856 ITGB3BP -105090 sc-eQTL 2.94e-01 0.106 0.101 0.345 pDC L2
ENSG00000203965 EFCAB7 -34741 sc-eQTL 3.85e-02 0.184 0.0881 0.345 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -104780 sc-eQTL 3.85e-02 0.18 0.0865 0.35 B_Memory LOneK1K
ENSG00000088035 ALG6 121056 sc-eQTL 9.26e-01 -0.00898 0.0966 0.35 B_Memory LOneK1K
ENSG00000116641 DOCK7 800245 sc-eQTL 7.01e-01 0.0322 0.0838 0.35 B_Memory LOneK1K
ENSG00000125703 ATG4C 704499 sc-eQTL 3.43e-01 -0.0642 0.0677 0.35 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -105090 sc-eQTL 6.75e-08 0.465 0.0831 0.35 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -34741 sc-eQTL 2.02e-04 0.34 0.0898 0.35 B_Memory LOneK1K
ENSG00000079739 PGM1 -104780 sc-eQTL 4.06e-03 0.259 0.0891 0.35 B_Naive LOneK1K
ENSG00000088035 ALG6 121056 sc-eQTL 5.81e-01 -0.0517 0.0935 0.35 B_Naive LOneK1K
ENSG00000116641 DOCK7 800245 sc-eQTL 8.99e-01 0.011 0.0873 0.35 B_Naive LOneK1K
ENSG00000125703 ATG4C 704499 sc-eQTL 6.57e-01 0.0296 0.0666 0.35 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -105090 sc-eQTL 1.16e-19 0.779 0.0775 0.35 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -34741 sc-eQTL 5.55e-03 0.261 0.093 0.35 B_Naive LOneK1K
ENSG00000079739 PGM1 -104780 sc-eQTL 2.71e-01 -0.0948 0.0859 0.35 CD14_Mono LOneK1K
ENSG00000088035 ALG6 121056 sc-eQTL 5.17e-02 -0.162 0.0827 0.35 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 800245 sc-eQTL 3.21e-01 0.0834 0.0838 0.35 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 704499 sc-eQTL 4.08e-01 -0.048 0.058 0.35 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -105090 sc-eQTL 2.24e-06 0.396 0.0815 0.35 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -104780 sc-eQTL 6.35e-01 -0.039 0.0821 0.349 CD16_Mono LOneK1K
ENSG00000088035 ALG6 121056 sc-eQTL 3.66e-01 -0.0843 0.0931 0.349 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 800245 sc-eQTL 9.68e-01 0.00365 0.0923 0.349 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 704499 sc-eQTL 3.97e-01 0.0667 0.0785 0.349 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -105090 sc-eQTL 3.89e-02 0.188 0.0904 0.349 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -104780 sc-eQTL 6.80e-01 0.0285 0.0689 0.349 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 121056 sc-eQTL 4.52e-01 -0.0623 0.0827 0.349 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 800245 sc-eQTL 8.20e-01 0.0169 0.0742 0.349 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 704499 sc-eQTL 6.60e-01 0.0326 0.074 0.349 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -105090 sc-eQTL 1.31e-04 0.33 0.0847 0.349 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -34741 sc-eQTL 5.80e-01 -0.0537 0.0968 0.349 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000088035 ALG6 121056 eQTL 2.17e-11 -0.0908 0.0134 0.00184 0.00235 0.358
ENSG00000116652 DLEU2L -58451 eQTL 0.00341 0.0785 0.0267 0.00211 0.0011 0.358
ENSG00000142856 ITGB3BP -105090 eQTL 1.06e-37 0.373 0.0278 0.00145 0.0155 0.358
ENSG00000203965 EFCAB7 -34741 eQTL 1.12e-04 0.0957 0.0247 0.0 0.0 0.358
ENSG00000230798 FOXD3-AS1 164190 eQTL 0.0197 -0.0628 0.0269 0.0 0.0 0.358

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000088035 ALG6 121056 5.03e-06 5.79e-06 6.55e-07 3.34e-06 1.58e-06 1.56e-06 7.39e-06 1.24e-06 4.82e-06 2.86e-06 7.57e-06 3.18e-06 9.33e-06 2.18e-06 9.19e-07 3.91e-06 2.6e-06 3.98e-06 1.55e-06 1.6e-06 2.61e-06 5.66e-06 4.68e-06 1.93e-06 8.54e-06 2.1e-06 2.89e-06 1.69e-06 5.21e-06 6.17e-06 2.65e-06 4.62e-07 7.87e-07 2.22e-06 1.98e-06 1.25e-06 1.04e-06 5.41e-07 8.53e-07 7.42e-07 7.36e-07 7.37e-06 7.19e-07 1.64e-07 7.17e-07 9.89e-07 1.03e-06 6.82e-07 5.92e-07
ENSG00000142856 ITGB3BP -105090 5.93e-06 7.69e-06 9.85e-07 3.84e-06 1.76e-06 2.56e-06 8.99e-06 1.28e-06 4.96e-06 3.55e-06 8.97e-06 3.28e-06 1.07e-05 3.14e-06 1.4e-06 4.67e-06 3.61e-06 3.8e-06 2.1e-06 2.41e-06 3.45e-06 7.46e-06 5.05e-06 1.93e-06 9.57e-06 2.25e-06 3.64e-06 2.34e-06 6.75e-06 7.61e-06 3.52e-06 5.55e-07 7.03e-07 2.77e-06 2.42e-06 1.71e-06 1.26e-06 1.19e-06 1.08e-06 8.68e-07 8.6e-07 8.1e-06 9.9e-07 1.66e-07 7.96e-07 1.01e-06 9.63e-07 6.21e-07 5.88e-07