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Genes within 1Mb (chr1:63421396:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -172015 sc-eQTL 2.21e-01 0.0893 0.0727 0.417 B L1
ENSG00000088035 ALG6 53821 sc-eQTL 3.89e-01 0.0652 0.0755 0.417 B L1
ENSG00000116641 DOCK7 733010 sc-eQTL 3.63e-01 -0.0688 0.0755 0.417 B L1
ENSG00000125703 ATG4C 637264 sc-eQTL 4.28e-01 -0.0417 0.0525 0.417 B L1
ENSG00000142856 ITGB3BP -172325 sc-eQTL 5.44e-07 -0.407 0.0788 0.417 B L1
ENSG00000162607 USP1 985099 sc-eQTL 6.09e-01 0.0371 0.0726 0.417 B L1
ENSG00000203965 EFCAB7 -101976 sc-eQTL 8.61e-05 -0.331 0.0826 0.417 B L1
ENSG00000079739 PGM1 -172015 sc-eQTL 3.87e-01 0.0543 0.0626 0.417 CD4T L1
ENSG00000088035 ALG6 53821 sc-eQTL 2.96e-01 0.0723 0.0691 0.417 CD4T L1
ENSG00000116641 DOCK7 733010 sc-eQTL 6.54e-01 -0.0314 0.0701 0.417 CD4T L1
ENSG00000125703 ATG4C 637264 sc-eQTL 6.59e-01 0.025 0.0566 0.417 CD4T L1
ENSG00000142856 ITGB3BP -172325 sc-eQTL 3.68e-08 -0.427 0.0748 0.417 CD4T L1
ENSG00000162607 USP1 985099 sc-eQTL 2.35e-01 -0.0651 0.0547 0.417 CD4T L1
ENSG00000203965 EFCAB7 -101976 sc-eQTL 2.25e-03 -0.218 0.0705 0.417 CD4T L1
ENSG00000079739 PGM1 -172015 sc-eQTL 6.45e-01 0.0321 0.0695 0.417 CD8T L1
ENSG00000088035 ALG6 53821 sc-eQTL 6.83e-01 -0.0313 0.0766 0.417 CD8T L1
ENSG00000116641 DOCK7 733010 sc-eQTL 5.86e-01 -0.0423 0.0776 0.417 CD8T L1
ENSG00000125703 ATG4C 637264 sc-eQTL 6.92e-01 0.0293 0.0738 0.417 CD8T L1
ENSG00000142856 ITGB3BP -172325 sc-eQTL 3.65e-09 -0.468 0.076 0.417 CD8T L1
ENSG00000162607 USP1 985099 sc-eQTL 9.63e-01 -0.003 0.0643 0.417 CD8T L1
ENSG00000203965 EFCAB7 -101976 sc-eQTL 1.99e-04 -0.301 0.0796 0.417 CD8T L1
ENSG00000079739 PGM1 -172015 sc-eQTL 2.77e-01 0.0835 0.0766 0.419 DC L1
ENSG00000088035 ALG6 53821 sc-eQTL 1.95e-01 0.103 0.079 0.419 DC L1
ENSG00000116641 DOCK7 733010 sc-eQTL 9.32e-01 0.0069 0.0813 0.419 DC L1
ENSG00000125703 ATG4C 637264 sc-eQTL 7.76e-01 -0.0181 0.0636 0.419 DC L1
ENSG00000142856 ITGB3BP -172325 sc-eQTL 5.06e-01 -0.0592 0.0888 0.419 DC L1
ENSG00000162607 USP1 985099 sc-eQTL 1.67e-01 0.107 0.0773 0.419 DC L1
ENSG00000203965 EFCAB7 -101976 sc-eQTL 1.64e-01 -0.108 0.077 0.419 DC L1
ENSG00000079739 PGM1 -172015 sc-eQTL 4.06e-01 0.0625 0.075 0.417 Mono L1
ENSG00000088035 ALG6 53821 sc-eQTL 5.42e-01 0.0479 0.0784 0.417 Mono L1
ENSG00000116641 DOCK7 733010 sc-eQTL 1.57e-01 -0.107 0.0755 0.417 Mono L1
ENSG00000125703 ATG4C 637264 sc-eQTL 5.24e-01 0.0327 0.0512 0.417 Mono L1
ENSG00000142856 ITGB3BP -172325 sc-eQTL 7.67e-04 -0.269 0.0789 0.417 Mono L1
ENSG00000162607 USP1 985099 sc-eQTL 9.28e-01 -0.00604 0.0665 0.417 Mono L1
ENSG00000079739 PGM1 -172015 sc-eQTL 6.24e-01 0.0314 0.064 0.416 NK L1
ENSG00000088035 ALG6 53821 sc-eQTL 6.89e-02 0.136 0.0745 0.416 NK L1
ENSG00000116641 DOCK7 733010 sc-eQTL 5.70e-01 0.0351 0.0618 0.416 NK L1
ENSG00000125703 ATG4C 637264 sc-eQTL 7.61e-01 -0.0202 0.0664 0.416 NK L1
ENSG00000142856 ITGB3BP -172325 sc-eQTL 2.80e-04 -0.296 0.08 0.416 NK L1
ENSG00000162607 USP1 985099 sc-eQTL 6.05e-01 0.0382 0.0737 0.416 NK L1
ENSG00000203965 EFCAB7 -101976 sc-eQTL 3.03e-01 -0.0922 0.0894 0.416 NK L1
ENSG00000079739 PGM1 -172015 sc-eQTL 3.81e-01 -0.0643 0.0731 0.417 Other_T L1
ENSG00000088035 ALG6 53821 sc-eQTL 9.99e-01 7.21e-05 0.0736 0.417 Other_T L1
ENSG00000116641 DOCK7 733010 sc-eQTL 7.16e-01 0.0274 0.0751 0.417 Other_T L1
ENSG00000125703 ATG4C 637264 sc-eQTL 1.69e-02 0.155 0.0642 0.417 Other_T L1
ENSG00000142856 ITGB3BP -172325 sc-eQTL 3.18e-02 -0.123 0.0571 0.417 Other_T L1
ENSG00000162607 USP1 985099 sc-eQTL 5.15e-01 -0.0326 0.05 0.417 Other_T L1
ENSG00000203965 EFCAB7 -101976 sc-eQTL 3.28e-01 -0.087 0.0888 0.417 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -172015 sc-eQTL 3.59e-01 0.0905 0.0984 0.418 B_Activated L2
ENSG00000088035 ALG6 53821 sc-eQTL 2.28e-01 0.114 0.0941 0.418 B_Activated L2
ENSG00000116641 DOCK7 733010 sc-eQTL 2.44e-01 0.102 0.0876 0.418 B_Activated L2
ENSG00000125703 ATG4C 637264 sc-eQTL 6.54e-01 0.0415 0.0925 0.418 B_Activated L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 8.25e-02 -0.156 0.0896 0.418 B_Activated L2
ENSG00000162607 USP1 985099 sc-eQTL 5.92e-01 -0.0526 0.0979 0.418 B_Activated L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 3.61e-01 -0.0781 0.0854 0.418 B_Activated L2
ENSG00000079739 PGM1 -172015 sc-eQTL 2.75e-01 0.094 0.0859 0.416 B_Intermediate L2
ENSG00000088035 ALG6 53821 sc-eQTL 4.50e-01 -0.066 0.0873 0.416 B_Intermediate L2
ENSG00000116641 DOCK7 733010 sc-eQTL 6.58e-01 0.0371 0.0835 0.416 B_Intermediate L2
ENSG00000125703 ATG4C 637264 sc-eQTL 3.79e-02 0.146 0.07 0.416 B_Intermediate L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 8.40e-03 -0.22 0.0829 0.416 B_Intermediate L2
ENSG00000162607 USP1 985099 sc-eQTL 6.56e-01 -0.0375 0.0841 0.416 B_Intermediate L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 2.03e-03 -0.255 0.0816 0.416 B_Intermediate L2
ENSG00000079739 PGM1 -172015 sc-eQTL 7.27e-01 -0.0296 0.0845 0.416 B_Memory L2
ENSG00000088035 ALG6 53821 sc-eQTL 5.33e-01 0.0537 0.0859 0.416 B_Memory L2
ENSG00000116641 DOCK7 733010 sc-eQTL 1.39e-01 -0.119 0.0802 0.416 B_Memory L2
ENSG00000125703 ATG4C 637264 sc-eQTL 7.95e-01 -0.0199 0.0766 0.416 B_Memory L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 7.83e-02 -0.154 0.0871 0.416 B_Memory L2
ENSG00000162607 USP1 985099 sc-eQTL 1.87e-01 -0.117 0.0881 0.416 B_Memory L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 5.15e-02 -0.169 0.0863 0.416 B_Memory L2
ENSG00000079739 PGM1 -172015 sc-eQTL 1.89e-01 0.113 0.086 0.417 B_Naive1 L2
ENSG00000088035 ALG6 53821 sc-eQTL 8.96e-01 0.0114 0.0867 0.417 B_Naive1 L2
ENSG00000116641 DOCK7 733010 sc-eQTL 8.59e-01 -0.0148 0.083 0.417 B_Naive1 L2
ENSG00000125703 ATG4C 637264 sc-eQTL 8.52e-01 -0.012 0.0639 0.417 B_Naive1 L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 3.47e-05 -0.345 0.0815 0.417 B_Naive1 L2
ENSG00000162607 USP1 985099 sc-eQTL 5.14e-01 0.0488 0.0745 0.417 B_Naive1 L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 4.82e-03 -0.253 0.0888 0.417 B_Naive1 L2
ENSG00000079739 PGM1 -172015 sc-eQTL 5.81e-01 0.0471 0.0852 0.416 B_Naive2 L2
ENSG00000088035 ALG6 53821 sc-eQTL 4.25e-01 0.0709 0.0887 0.416 B_Naive2 L2
ENSG00000116641 DOCK7 733010 sc-eQTL 8.74e-01 0.0135 0.0855 0.416 B_Naive2 L2
ENSG00000125703 ATG4C 637264 sc-eQTL 2.11e-01 -0.103 0.082 0.416 B_Naive2 L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 7.40e-06 -0.391 0.085 0.416 B_Naive2 L2
ENSG00000162607 USP1 985099 sc-eQTL 5.13e-01 0.0556 0.0848 0.416 B_Naive2 L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 1.91e-01 0.116 0.0884 0.416 B_Naive2 L2
ENSG00000079739 PGM1 -172015 sc-eQTL 8.50e-01 -0.0163 0.0861 0.414 CD4_CTL L2
ENSG00000088035 ALG6 53821 sc-eQTL 7.67e-01 -0.027 0.091 0.414 CD4_CTL L2
ENSG00000116641 DOCK7 733010 sc-eQTL 3.44e-01 0.0754 0.0794 0.414 CD4_CTL L2
ENSG00000125703 ATG4C 637264 sc-eQTL 9.03e-01 0.01 0.0823 0.414 CD4_CTL L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 5.77e-01 -0.0492 0.088 0.414 CD4_CTL L2
ENSG00000162607 USP1 985099 sc-eQTL 8.04e-01 -0.0208 0.0838 0.414 CD4_CTL L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 8.38e-01 0.0171 0.0837 0.414 CD4_CTL L2
ENSG00000079739 PGM1 -172015 sc-eQTL 2.65e-01 0.0782 0.07 0.417 CD4_Naive L2
ENSG00000088035 ALG6 53821 sc-eQTL 5.05e-01 0.0509 0.0762 0.417 CD4_Naive L2
ENSG00000116641 DOCK7 733010 sc-eQTL 9.69e-01 -0.00291 0.075 0.417 CD4_Naive L2
ENSG00000125703 ATG4C 637264 sc-eQTL 6.34e-01 0.0316 0.0662 0.417 CD4_Naive L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 2.35e-07 -0.406 0.076 0.417 CD4_Naive L2
ENSG00000162607 USP1 985099 sc-eQTL 3.06e-01 -0.0633 0.0617 0.417 CD4_Naive L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 2.57e-02 -0.178 0.0795 0.417 CD4_Naive L2
ENSG00000079739 PGM1 -172015 sc-eQTL 8.77e-01 -0.0114 0.0734 0.417 CD4_TCM L2
ENSG00000088035 ALG6 53821 sc-eQTL 6.38e-01 0.0401 0.0851 0.417 CD4_TCM L2
ENSG00000116641 DOCK7 733010 sc-eQTL 1.94e-01 -0.098 0.0752 0.417 CD4_TCM L2
ENSG00000125703 ATG4C 637264 sc-eQTL 2.64e-01 -0.0821 0.0733 0.417 CD4_TCM L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 8.88e-05 -0.334 0.0835 0.417 CD4_TCM L2
ENSG00000162607 USP1 985099 sc-eQTL 2.64e-01 -0.0792 0.0708 0.417 CD4_TCM L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 1.17e-03 -0.269 0.0818 0.417 CD4_TCM L2
ENSG00000079739 PGM1 -172015 sc-eQTL 7.14e-03 0.231 0.0849 0.417 CD4_TEM L2
ENSG00000088035 ALG6 53821 sc-eQTL 5.70e-01 0.0494 0.0867 0.417 CD4_TEM L2
ENSG00000116641 DOCK7 733010 sc-eQTL 9.53e-01 0.005 0.0846 0.417 CD4_TEM L2
ENSG00000125703 ATG4C 637264 sc-eQTL 3.78e-01 0.0724 0.082 0.417 CD4_TEM L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 1.06e-02 -0.215 0.0835 0.417 CD4_TEM L2
ENSG00000162607 USP1 985099 sc-eQTL 2.79e-03 -0.238 0.0787 0.417 CD4_TEM L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 1.76e-01 -0.119 0.0875 0.417 CD4_TEM L2
ENSG00000079739 PGM1 -172015 sc-eQTL 6.04e-01 0.0408 0.0785 0.417 CD8_CTL L2
ENSG00000088035 ALG6 53821 sc-eQTL 3.65e-01 -0.0756 0.0834 0.417 CD8_CTL L2
ENSG00000116641 DOCK7 733010 sc-eQTL 4.12e-01 -0.0651 0.0791 0.417 CD8_CTL L2
ENSG00000125703 ATG4C 637264 sc-eQTL 4.63e-02 0.168 0.0836 0.417 CD8_CTL L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 2.82e-02 -0.192 0.0867 0.417 CD8_CTL L2
ENSG00000162607 USP1 985099 sc-eQTL 5.33e-01 0.049 0.0785 0.417 CD8_CTL L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 2.66e-01 -0.0998 0.0896 0.417 CD8_CTL L2
ENSG00000079739 PGM1 -172015 sc-eQTL 1.50e-01 0.115 0.0796 0.417 CD8_Naive L2
ENSG00000088035 ALG6 53821 sc-eQTL 7.59e-01 0.0255 0.0828 0.417 CD8_Naive L2
ENSG00000116641 DOCK7 733010 sc-eQTL 8.57e-01 -0.0155 0.0856 0.417 CD8_Naive L2
ENSG00000125703 ATG4C 637264 sc-eQTL 5.17e-01 -0.0533 0.0821 0.417 CD8_Naive L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 1.06e-07 -0.429 0.0778 0.417 CD8_Naive L2
ENSG00000162607 USP1 985099 sc-eQTL 1.01e-01 -0.115 0.0699 0.417 CD8_Naive L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 5.65e-02 -0.149 0.0778 0.417 CD8_Naive L2
ENSG00000079739 PGM1 -172015 sc-eQTL 9.02e-01 -0.0107 0.0867 0.421 CD8_TCM L2
ENSG00000088035 ALG6 53821 sc-eQTL 5.79e-01 -0.0488 0.0878 0.421 CD8_TCM L2
ENSG00000116641 DOCK7 733010 sc-eQTL 6.05e-01 -0.0444 0.0857 0.421 CD8_TCM L2
ENSG00000125703 ATG4C 637264 sc-eQTL 5.45e-01 -0.0531 0.0876 0.421 CD8_TCM L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 9.05e-02 -0.144 0.0846 0.421 CD8_TCM L2
ENSG00000162607 USP1 985099 sc-eQTL 6.26e-01 -0.04 0.0819 0.421 CD8_TCM L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 1.10e-01 -0.138 0.0863 0.421 CD8_TCM L2
ENSG00000079739 PGM1 -172015 sc-eQTL 1.54e-01 -0.127 0.0889 0.402 CD8_TEM L2
ENSG00000088035 ALG6 53821 sc-eQTL 5.59e-01 0.0524 0.0896 0.402 CD8_TEM L2
ENSG00000116641 DOCK7 733010 sc-eQTL 3.84e-01 -0.0757 0.0867 0.402 CD8_TEM L2
ENSG00000125703 ATG4C 637264 sc-eQTL 3.07e-02 0.18 0.0826 0.402 CD8_TEM L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 4.18e-02 -0.183 0.0895 0.402 CD8_TEM L2
ENSG00000162607 USP1 985099 sc-eQTL 5.94e-01 0.046 0.0862 0.402 CD8_TEM L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 5.20e-02 -0.17 0.0869 0.402 CD8_TEM L2
ENSG00000079739 PGM1 -172015 sc-eQTL 7.02e-01 -0.0327 0.0855 0.416 MAIT L2
ENSG00000088035 ALG6 53821 sc-eQTL 4.98e-01 -0.0573 0.0846 0.416 MAIT L2
ENSG00000116641 DOCK7 733010 sc-eQTL 7.40e-01 0.0269 0.0811 0.416 MAIT L2
ENSG00000125703 ATG4C 637264 sc-eQTL 1.00e-01 0.14 0.085 0.416 MAIT L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 1.38e-02 -0.21 0.0844 0.416 MAIT L2
ENSG00000162607 USP1 985099 sc-eQTL 3.92e-01 -0.0728 0.0849 0.416 MAIT L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 9.10e-01 -0.00997 0.0882 0.416 MAIT L2
ENSG00000079739 PGM1 -172015 sc-eQTL 6.23e-01 0.0417 0.0846 0.416 NK_CD56bright L2
ENSG00000088035 ALG6 53821 sc-eQTL 6.44e-02 0.16 0.0861 0.416 NK_CD56bright L2
ENSG00000116641 DOCK7 733010 sc-eQTL 5.86e-01 0.041 0.0751 0.416 NK_CD56bright L2
ENSG00000125703 ATG4C 637264 sc-eQTL 9.46e-01 -0.00567 0.084 0.416 NK_CD56bright L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 7.68e-01 -0.0259 0.0875 0.416 NK_CD56bright L2
ENSG00000162607 USP1 985099 sc-eQTL 7.62e-01 -0.0273 0.0902 0.416 NK_CD56bright L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 7.11e-02 -0.155 0.0856 0.416 NK_CD56bright L2
ENSG00000079739 PGM1 -172015 sc-eQTL 7.85e-01 0.0181 0.0663 0.416 NK_CD56dim L2
ENSG00000088035 ALG6 53821 sc-eQTL 5.05e-01 0.0562 0.0841 0.416 NK_CD56dim L2
ENSG00000116641 DOCK7 733010 sc-eQTL 7.89e-01 -0.0196 0.0732 0.416 NK_CD56dim L2
ENSG00000125703 ATG4C 637264 sc-eQTL 2.78e-02 -0.163 0.0735 0.416 NK_CD56dim L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 1.33e-01 -0.127 0.0842 0.416 NK_CD56dim L2
ENSG00000162607 USP1 985099 sc-eQTL 7.35e-01 0.0278 0.0821 0.416 NK_CD56dim L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 6.77e-01 -0.0382 0.0914 0.416 NK_CD56dim L2
ENSG00000079739 PGM1 -172015 sc-eQTL 8.54e-01 -0.0168 0.0913 0.42 NK_HLA L2
ENSG00000088035 ALG6 53821 sc-eQTL 2.58e-01 0.107 0.0944 0.42 NK_HLA L2
ENSG00000116641 DOCK7 733010 sc-eQTL 5.97e-01 -0.0383 0.0724 0.42 NK_HLA L2
ENSG00000125703 ATG4C 637264 sc-eQTL 9.63e-01 0.00389 0.0843 0.42 NK_HLA L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 4.37e-02 -0.178 0.0875 0.42 NK_HLA L2
ENSG00000162607 USP1 985099 sc-eQTL 6.65e-01 -0.0401 0.0925 0.42 NK_HLA L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 4.22e-01 0.0677 0.0841 0.42 NK_HLA L2
ENSG00000079739 PGM1 -172015 sc-eQTL 4.56e-01 0.0544 0.0729 0.416 NK_cytokine L2
ENSG00000088035 ALG6 53821 sc-eQTL 8.44e-01 0.0162 0.0825 0.416 NK_cytokine L2
ENSG00000116641 DOCK7 733010 sc-eQTL 7.10e-01 0.0285 0.0764 0.416 NK_cytokine L2
ENSG00000125703 ATG4C 637264 sc-eQTL 1.47e-01 0.113 0.0778 0.416 NK_cytokine L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 1.60e-03 -0.253 0.0791 0.416 NK_cytokine L2
ENSG00000162607 USP1 985099 sc-eQTL 1.44e-01 0.124 0.0847 0.416 NK_cytokine L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 9.05e-01 -0.0103 0.0863 0.416 NK_cytokine L2
ENSG00000079739 PGM1 -172015 sc-eQTL 2.74e-01 -0.117 0.106 0.411 PB L2
ENSG00000088035 ALG6 53821 sc-eQTL 7.43e-01 0.0369 0.112 0.411 PB L2
ENSG00000116641 DOCK7 733010 sc-eQTL 1.08e-01 -0.192 0.119 0.411 PB L2
ENSG00000125703 ATG4C 637264 sc-eQTL 8.15e-01 0.0246 0.105 0.411 PB L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 8.78e-02 -0.178 0.103 0.411 PB L2
ENSG00000162607 USP1 985099 sc-eQTL 4.87e-01 0.0725 0.104 0.411 PB L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 9.22e-02 -0.192 0.113 0.411 PB L2
ENSG00000079739 PGM1 -172015 sc-eQTL 3.55e-01 -0.0737 0.0795 0.415 Pro_T L2
ENSG00000088035 ALG6 53821 sc-eQTL 9.08e-01 0.00934 0.0811 0.415 Pro_T L2
ENSG00000116641 DOCK7 733010 sc-eQTL 2.57e-01 -0.0922 0.0811 0.415 Pro_T L2
ENSG00000125703 ATG4C 637264 sc-eQTL 3.46e-01 -0.0671 0.0711 0.415 Pro_T L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 1.53e-01 0.102 0.0711 0.415 Pro_T L2
ENSG00000162607 USP1 985099 sc-eQTL 3.70e-01 -0.044 0.049 0.415 Pro_T L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 7.28e-01 0.0289 0.083 0.415 Pro_T L2
ENSG00000079739 PGM1 -172015 sc-eQTL 6.75e-01 -0.0352 0.0839 0.417 Treg L2
ENSG00000088035 ALG6 53821 sc-eQTL 1.54e-01 0.128 0.0893 0.417 Treg L2
ENSG00000116641 DOCK7 733010 sc-eQTL 6.79e-01 0.0342 0.0823 0.417 Treg L2
ENSG00000125703 ATG4C 637264 sc-eQTL 5.32e-01 0.0526 0.0841 0.417 Treg L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 6.36e-01 0.0417 0.088 0.417 Treg L2
ENSG00000162607 USP1 985099 sc-eQTL 4.44e-01 0.0652 0.0851 0.417 Treg L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 7.87e-01 -0.0228 0.0842 0.417 Treg L2
ENSG00000079739 PGM1 -172015 sc-eQTL 8.38e-01 0.017 0.0829 0.415 cDC L2
ENSG00000088035 ALG6 53821 sc-eQTL 5.97e-01 -0.0445 0.084 0.415 cDC L2
ENSG00000116641 DOCK7 733010 sc-eQTL 6.45e-01 0.0381 0.0825 0.415 cDC L2
ENSG00000125703 ATG4C 637264 sc-eQTL 7.28e-01 -0.0249 0.0716 0.415 cDC L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 4.40e-01 -0.0702 0.0907 0.415 cDC L2
ENSG00000162607 USP1 985099 sc-eQTL 7.21e-01 -0.029 0.0808 0.415 cDC L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 6.09e-01 -0.0374 0.0729 0.415 cDC L2
ENSG00000079739 PGM1 -172015 sc-eQTL 2.23e-01 0.0949 0.0776 0.417 cMono_IL1B L2
ENSG00000088035 ALG6 53821 sc-eQTL 6.69e-01 0.0334 0.0779 0.417 cMono_IL1B L2
ENSG00000116641 DOCK7 733010 sc-eQTL 8.91e-02 -0.139 0.0816 0.417 cMono_IL1B L2
ENSG00000125703 ATG4C 637264 sc-eQTL 8.88e-01 -0.00816 0.0578 0.417 cMono_IL1B L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 7.35e-05 -0.319 0.0789 0.417 cMono_IL1B L2
ENSG00000162607 USP1 985099 sc-eQTL 6.49e-01 0.0329 0.0722 0.417 cMono_IL1B L2
ENSG00000079739 PGM1 -172015 sc-eQTL 6.73e-01 0.0366 0.0867 0.417 cMono_S100A L2
ENSG00000088035 ALG6 53821 sc-eQTL 8.76e-01 -0.0138 0.0879 0.417 cMono_S100A L2
ENSG00000116641 DOCK7 733010 sc-eQTL 7.33e-01 0.0278 0.0815 0.417 cMono_S100A L2
ENSG00000125703 ATG4C 637264 sc-eQTL 1.38e-01 0.105 0.0702 0.417 cMono_S100A L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 4.97e-01 -0.0541 0.0795 0.417 cMono_S100A L2
ENSG00000162607 USP1 985099 sc-eQTL 6.44e-02 -0.151 0.0813 0.417 cMono_S100A L2
ENSG00000079739 PGM1 -172015 sc-eQTL 7.60e-01 0.0289 0.0942 0.43 gdT L2
ENSG00000088035 ALG6 53821 sc-eQTL 9.61e-01 -0.00493 0.1 0.43 gdT L2
ENSG00000116641 DOCK7 733010 sc-eQTL 1.50e-01 0.142 0.0978 0.43 gdT L2
ENSG00000125703 ATG4C 637264 sc-eQTL 2.97e-01 0.0981 0.0937 0.43 gdT L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 1.83e-01 -0.133 0.0993 0.43 gdT L2
ENSG00000162607 USP1 985099 sc-eQTL 7.68e-01 -0.0279 0.0945 0.43 gdT L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 8.18e-01 0.0226 0.0983 0.43 gdT L2
ENSG00000079739 PGM1 -172015 sc-eQTL 4.33e-02 0.177 0.0869 0.413 intMono L2
ENSG00000088035 ALG6 53821 sc-eQTL 4.64e-01 0.0599 0.0817 0.413 intMono L2
ENSG00000116641 DOCK7 733010 sc-eQTL 7.41e-01 0.0276 0.0835 0.413 intMono L2
ENSG00000125703 ATG4C 637264 sc-eQTL 3.45e-01 0.0753 0.0795 0.413 intMono L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 2.62e-03 -0.262 0.0859 0.413 intMono L2
ENSG00000162607 USP1 985099 sc-eQTL 8.33e-01 0.0188 0.0893 0.413 intMono L2
ENSG00000079739 PGM1 -172015 sc-eQTL 8.32e-01 0.0165 0.0775 0.416 ncMono L2
ENSG00000088035 ALG6 53821 sc-eQTL 1.68e-01 -0.117 0.0848 0.416 ncMono L2
ENSG00000116641 DOCK7 733010 sc-eQTL 1.80e-01 -0.112 0.0835 0.416 ncMono L2
ENSG00000125703 ATG4C 637264 sc-eQTL 2.76e-01 -0.0852 0.0781 0.416 ncMono L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 2.53e-01 -0.0936 0.0817 0.416 ncMono L2
ENSG00000162607 USP1 985099 sc-eQTL 6.44e-01 0.0387 0.0837 0.416 ncMono L2
ENSG00000079739 PGM1 -172015 sc-eQTL 8.70e-01 -0.0154 0.0944 0.415 pDC L2
ENSG00000088035 ALG6 53821 sc-eQTL 2.95e-01 0.0962 0.0916 0.415 pDC L2
ENSG00000116641 DOCK7 733010 sc-eQTL 9.45e-02 -0.156 0.093 0.415 pDC L2
ENSG00000125703 ATG4C 637264 sc-eQTL 7.04e-01 0.0321 0.0842 0.415 pDC L2
ENSG00000142856 ITGB3BP -172325 sc-eQTL 6.47e-01 -0.0433 0.0945 0.415 pDC L2
ENSG00000162607 USP1 985099 sc-eQTL 2.03e-01 0.123 0.0958 0.415 pDC L2
ENSG00000203965 EFCAB7 -101976 sc-eQTL 6.63e-01 -0.0365 0.0836 0.415 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -172015 sc-eQTL 5.90e-01 0.0438 0.0812 0.417 B_Memory LOneK1K
ENSG00000088035 ALG6 53821 sc-eQTL 9.37e-01 -0.0071 0.0898 0.417 B_Memory LOneK1K
ENSG00000116641 DOCK7 733010 sc-eQTL 6.27e-01 -0.038 0.0779 0.417 B_Memory LOneK1K
ENSG00000125703 ATG4C 637264 sc-eQTL 1.11e-01 0.1 0.0626 0.417 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -172325 sc-eQTL 5.30e-03 -0.229 0.0813 0.417 B_Memory LOneK1K
ENSG00000162607 USP1 985099 sc-eQTL 4.97e-01 -0.0547 0.0803 0.417 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -101976 sc-eQTL 1.48e-05 -0.366 0.0825 0.417 B_Memory LOneK1K
ENSG00000079739 PGM1 -172015 sc-eQTL 1.61e-01 0.118 0.0839 0.417 B_Naive LOneK1K
ENSG00000088035 ALG6 53821 sc-eQTL 6.02e-01 0.0453 0.0868 0.417 B_Naive LOneK1K
ENSG00000116641 DOCK7 733010 sc-eQTL 7.42e-01 -0.0267 0.081 0.417 B_Naive LOneK1K
ENSG00000125703 ATG4C 637264 sc-eQTL 1.89e-01 -0.0812 0.0616 0.417 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -172325 sc-eQTL 9.03e-07 -0.418 0.0826 0.417 B_Naive LOneK1K
ENSG00000162607 USP1 985099 sc-eQTL 2.19e-01 0.0922 0.0749 0.417 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -101976 sc-eQTL 1.19e-01 -0.137 0.0874 0.417 B_Naive LOneK1K
ENSG00000079739 PGM1 -172015 sc-eQTL 4.23e-01 0.0639 0.0796 0.417 CD14_Mono LOneK1K
ENSG00000088035 ALG6 53821 sc-eQTL 7.91e-01 0.0204 0.0772 0.417 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 733010 sc-eQTL 1.35e-01 -0.116 0.0773 0.417 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 637264 sc-eQTL 3.87e-01 0.0465 0.0536 0.417 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -172325 sc-eQTL 2.22e-03 -0.241 0.0778 0.417 CD14_Mono LOneK1K
ENSG00000162607 USP1 985099 sc-eQTL 3.41e-01 -0.0647 0.0678 0.417 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -172015 sc-eQTL 1.33e-01 0.114 0.0753 0.416 CD16_Mono LOneK1K
ENSG00000088035 ALG6 53821 sc-eQTL 9.59e-01 -0.00444 0.086 0.416 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 733010 sc-eQTL 4.90e-01 -0.0588 0.085 0.416 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 637264 sc-eQTL 3.27e-01 -0.0711 0.0724 0.416 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -172325 sc-eQTL 4.47e-03 -0.237 0.0826 0.416 CD16_Mono LOneK1K
ENSG00000162607 USP1 985099 sc-eQTL 3.84e-01 0.0689 0.079 0.416 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -172015 sc-eQTL 7.38e-01 0.0217 0.065 0.416 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 53821 sc-eQTL 2.46e-01 0.0905 0.0778 0.416 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 733010 sc-eQTL 7.74e-01 0.0201 0.0699 0.416 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 637264 sc-eQTL 8.60e-01 -0.0124 0.0698 0.416 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -172325 sc-eQTL 4.41e-04 -0.287 0.0803 0.416 NK_CD56dim LOneK1K
ENSG00000162607 USP1 985099 sc-eQTL 2.90e-01 0.0795 0.0749 0.416 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -101976 sc-eQTL 7.45e-01 -0.0298 0.0914 0.416 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -172015 eQTL 1.39e-13 0.13 0.0174 0.00286 0.00267 0.419
ENSG00000088035 ALG6 53821 eQTL 7.71e-06 0.0591 0.0131 0.0 0.0 0.419
ENSG00000116641 DOCK7 733028 eQTL 0.0119 -0.0557 0.0221 0.0 0.0 0.419
ENSG00000116652 DLEU2L -125686 eQTL 0.00059 -0.089 0.0258 0.00513 0.00501 0.419
ENSG00000185483 ROR1 -352621 pQTL 0.00783 0.0356 0.0134 0.00142 0.0 0.416
ENSG00000203965 EFCAB7 -101976 eQTL 9.62e-08 -0.127 0.0237 0.019 0.0179 0.419
ENSG00000230798 FOXD3-AS1 96955 eQTL 0.0308 0.0563 0.026 0.0 0.0 0.419

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -172015 4.49e-06 4.89e-06 8.72e-07 2.59e-06 1.12e-06 1.55e-06 4.07e-06 1.01e-06 4.53e-06 2.44e-06 5.26e-06 3.29e-06 7.44e-06 2.04e-06 1.45e-06 3.05e-06 2.06e-06 2.88e-06 1.36e-06 9.5e-07 2.85e-06 4.6e-06 3.64e-06 1.52e-06 5.16e-06 1.72e-06 2.62e-06 1.69e-06 4.32e-06 3.42e-06 2.38e-06 5.93e-07 7.32e-07 1.75e-06 2.07e-06 9.77e-07 9.59e-07 4.42e-07 1.29e-06 3.4e-07 3.75e-07 5.69e-06 3.65e-07 1.69e-07 4.86e-07 4.3e-07 1.01e-06 4.11e-07 3.41e-07
ENSG00000088035 ALG6 53821 1.53e-05 1.73e-05 3.02e-06 1.02e-05 2.95e-06 7.51e-06 2.26e-05 3.39e-06 1.67e-05 8.7e-06 2.11e-05 8.37e-06 2.75e-05 6.49e-06 5.14e-06 9.99e-06 8.09e-06 1.4e-05 4.15e-06 4.2e-06 8.13e-06 1.58e-05 1.64e-05 5.19e-06 2.59e-05 5.41e-06 8.04e-06 7.68e-06 1.67e-05 1.38e-05 1.13e-05 1.26e-06 1.49e-06 4.3e-06 7.59e-06 3.93e-06 1.81e-06 2.73e-06 2.81e-06 2.11e-06 1.48e-06 2.01e-05 2.54e-06 2.62e-07 1.88e-06 2.63e-06 2.95e-06 1.24e-06 1.02e-06