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Genes within 1Mb (chr1:63366969:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -226442 sc-eQTL 3.29e-02 0.166 0.0772 0.541 B L1
ENSG00000088035 ALG6 -606 sc-eQTL 7.99e-01 -0.0206 0.0808 0.541 B L1
ENSG00000116641 DOCK7 678583 sc-eQTL 4.50e-01 -0.0611 0.0807 0.541 B L1
ENSG00000125703 ATG4C 582837 sc-eQTL 8.28e-01 -0.0122 0.0562 0.541 B L1
ENSG00000142856 ITGB3BP -226752 sc-eQTL 1.16e-06 -0.423 0.0845 0.541 B L1
ENSG00000162607 USP1 930672 sc-eQTL 2.47e-01 0.0899 0.0774 0.541 B L1
ENSG00000203965 EFCAB7 -156403 sc-eQTL 8.98e-03 -0.238 0.0901 0.541 B L1
ENSG00000079739 PGM1 -226442 sc-eQTL 1.17e-01 0.106 0.0669 0.541 CD4T L1
ENSG00000088035 ALG6 -606 sc-eQTL 8.19e-01 0.017 0.0743 0.541 CD4T L1
ENSG00000116641 DOCK7 678583 sc-eQTL 5.53e-01 -0.0447 0.0752 0.541 CD4T L1
ENSG00000125703 ATG4C 582837 sc-eQTL 4.20e-01 0.049 0.0607 0.541 CD4T L1
ENSG00000142856 ITGB3BP -226752 sc-eQTL 2.30e-10 -0.522 0.0784 0.541 CD4T L1
ENSG00000162607 USP1 930672 sc-eQTL 9.37e-02 -0.0986 0.0586 0.541 CD4T L1
ENSG00000203965 EFCAB7 -156403 sc-eQTL 4.13e-02 -0.157 0.0767 0.541 CD4T L1
ENSG00000079739 PGM1 -226442 sc-eQTL 6.07e-01 0.0382 0.0741 0.541 CD8T L1
ENSG00000088035 ALG6 -606 sc-eQTL 6.52e-02 -0.15 0.0811 0.541 CD8T L1
ENSG00000116641 DOCK7 678583 sc-eQTL 3.35e-01 0.0798 0.0827 0.541 CD8T L1
ENSG00000125703 ATG4C 582837 sc-eQTL 6.87e-01 0.0317 0.0787 0.541 CD8T L1
ENSG00000142856 ITGB3BP -226752 sc-eQTL 7.73e-08 -0.458 0.0822 0.541 CD8T L1
ENSG00000162607 USP1 930672 sc-eQTL 9.83e-01 0.00147 0.0686 0.541 CD8T L1
ENSG00000203965 EFCAB7 -156403 sc-eQTL 1.84e-05 -0.368 0.084 0.541 CD8T L1
ENSG00000079739 PGM1 -226442 sc-eQTL 8.29e-01 0.0179 0.0827 0.541 DC L1
ENSG00000088035 ALG6 -606 sc-eQTL 8.80e-01 0.0129 0.0853 0.541 DC L1
ENSG00000116641 DOCK7 678583 sc-eQTL 6.64e-01 0.038 0.0874 0.541 DC L1
ENSG00000125703 ATG4C 582837 sc-eQTL 7.67e-01 0.0203 0.0684 0.541 DC L1
ENSG00000142856 ITGB3BP -226752 sc-eQTL 9.30e-01 -0.00845 0.0956 0.541 DC L1
ENSG00000162607 USP1 930672 sc-eQTL 8.63e-01 0.0144 0.0835 0.541 DC L1
ENSG00000203965 EFCAB7 -156403 sc-eQTL 3.97e-01 -0.0706 0.0831 0.541 DC L1
ENSG00000079739 PGM1 -226442 sc-eQTL 7.88e-01 0.0218 0.0809 0.541 Mono L1
ENSG00000088035 ALG6 -606 sc-eQTL 1.98e-01 0.109 0.0841 0.541 Mono L1
ENSG00000116641 DOCK7 678583 sc-eQTL 4.07e-01 -0.0677 0.0815 0.541 Mono L1
ENSG00000125703 ATG4C 582837 sc-eQTL 4.03e-01 0.0462 0.0551 0.541 Mono L1
ENSG00000142856 ITGB3BP -226752 sc-eQTL 1.43e-06 -0.41 0.0825 0.541 Mono L1
ENSG00000162607 USP1 930672 sc-eQTL 2.99e-01 -0.0744 0.0714 0.541 Mono L1
ENSG00000079739 PGM1 -226442 sc-eQTL 1.69e-01 0.0944 0.0684 0.539 NK L1
ENSG00000088035 ALG6 -606 sc-eQTL 9.05e-01 -0.00963 0.0806 0.539 NK L1
ENSG00000116641 DOCK7 678583 sc-eQTL 2.43e-01 0.0774 0.0661 0.539 NK L1
ENSG00000125703 ATG4C 582837 sc-eQTL 3.00e-01 0.0739 0.0711 0.539 NK L1
ENSG00000142856 ITGB3BP -226752 sc-eQTL 2.75e-03 -0.263 0.0867 0.539 NK L1
ENSG00000162607 USP1 930672 sc-eQTL 9.97e-01 0.000298 0.0792 0.539 NK L1
ENSG00000203965 EFCAB7 -156403 sc-eQTL 8.15e-02 -0.167 0.0955 0.539 NK L1
ENSG00000079739 PGM1 -226442 sc-eQTL 6.91e-01 -0.0311 0.078 0.541 Other_T L1
ENSG00000088035 ALG6 -606 sc-eQTL 4.73e-01 -0.0563 0.0783 0.541 Other_T L1
ENSG00000116641 DOCK7 678583 sc-eQTL 2.70e-01 0.0882 0.0798 0.541 Other_T L1
ENSG00000125703 ATG4C 582837 sc-eQTL 2.35e-02 0.156 0.0684 0.541 Other_T L1
ENSG00000142856 ITGB3BP -226752 sc-eQTL 2.55e-02 -0.137 0.0607 0.541 Other_T L1
ENSG00000162607 USP1 930672 sc-eQTL 7.35e-01 -0.018 0.0532 0.541 Other_T L1
ENSG00000203965 EFCAB7 -156403 sc-eQTL 2.30e-01 -0.114 0.0944 0.541 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -226442 sc-eQTL 1.23e-01 0.159 0.103 0.546 B_Activated L2
ENSG00000088035 ALG6 -606 sc-eQTL 3.95e-02 0.203 0.0978 0.546 B_Activated L2
ENSG00000116641 DOCK7 678583 sc-eQTL 9.15e-01 0.00985 0.0922 0.546 B_Activated L2
ENSG00000125703 ATG4C 582837 sc-eQTL 6.16e-01 0.0487 0.0969 0.546 B_Activated L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 1.59e-03 -0.295 0.0921 0.546 B_Activated L2
ENSG00000162607 USP1 930672 sc-eQTL 7.74e-01 -0.0296 0.103 0.546 B_Activated L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 2.83e-02 -0.196 0.0885 0.546 B_Activated L2
ENSG00000079739 PGM1 -226442 sc-eQTL 1.18e-01 0.144 0.0922 0.539 B_Intermediate L2
ENSG00000088035 ALG6 -606 sc-eQTL 2.15e-02 -0.215 0.093 0.539 B_Intermediate L2
ENSG00000116641 DOCK7 678583 sc-eQTL 9.78e-01 -0.00245 0.0899 0.539 B_Intermediate L2
ENSG00000125703 ATG4C 582837 sc-eQTL 6.28e-02 0.141 0.0755 0.539 B_Intermediate L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 2.47e-03 -0.272 0.0887 0.539 B_Intermediate L2
ENSG00000162607 USP1 930672 sc-eQTL 6.31e-01 0.0435 0.0905 0.539 B_Intermediate L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 3.78e-03 -0.258 0.0881 0.539 B_Intermediate L2
ENSG00000079739 PGM1 -226442 sc-eQTL 4.23e-01 0.0737 0.0919 0.541 B_Memory L2
ENSG00000088035 ALG6 -606 sc-eQTL 5.34e-01 0.0583 0.0935 0.541 B_Memory L2
ENSG00000116641 DOCK7 678583 sc-eQTL 2.38e-01 -0.103 0.0875 0.541 B_Memory L2
ENSG00000125703 ATG4C 582837 sc-eQTL 2.96e-01 -0.0872 0.0832 0.541 B_Memory L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 7.93e-02 -0.167 0.0947 0.541 B_Memory L2
ENSG00000162607 USP1 930672 sc-eQTL 4.41e-01 -0.0742 0.0961 0.541 B_Memory L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 8.01e-02 -0.165 0.0941 0.541 B_Memory L2
ENSG00000079739 PGM1 -226442 sc-eQTL 4.97e-02 0.18 0.091 0.541 B_Naive1 L2
ENSG00000088035 ALG6 -606 sc-eQTL 6.23e-01 -0.0453 0.0921 0.541 B_Naive1 L2
ENSG00000116641 DOCK7 678583 sc-eQTL 7.81e-01 -0.0245 0.0883 0.541 B_Naive1 L2
ENSG00000125703 ATG4C 582837 sc-eQTL 7.62e-01 0.0206 0.068 0.541 B_Naive1 L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 5.36e-04 -0.308 0.0877 0.541 B_Naive1 L2
ENSG00000162607 USP1 930672 sc-eQTL 7.58e-01 0.0245 0.0793 0.541 B_Naive1 L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 2.17e-01 -0.119 0.0959 0.541 B_Naive1 L2
ENSG00000079739 PGM1 -226442 sc-eQTL 2.90e-01 0.0958 0.0904 0.541 B_Naive2 L2
ENSG00000088035 ALG6 -606 sc-eQTL 1.63e-01 0.132 0.094 0.541 B_Naive2 L2
ENSG00000116641 DOCK7 678583 sc-eQTL 6.74e-01 -0.0382 0.0908 0.541 B_Naive2 L2
ENSG00000125703 ATG4C 582837 sc-eQTL 8.16e-02 -0.152 0.0868 0.541 B_Naive2 L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 3.28e-06 -0.43 0.09 0.541 B_Naive2 L2
ENSG00000162607 USP1 930672 sc-eQTL 1.92e-01 0.118 0.0899 0.541 B_Naive2 L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 4.80e-01 0.0666 0.0942 0.541 B_Naive2 L2
ENSG00000079739 PGM1 -226442 sc-eQTL 7.96e-01 0.0236 0.0914 0.536 CD4_CTL L2
ENSG00000088035 ALG6 -606 sc-eQTL 8.12e-01 0.0231 0.0966 0.536 CD4_CTL L2
ENSG00000116641 DOCK7 678583 sc-eQTL 4.27e-01 0.0672 0.0843 0.536 CD4_CTL L2
ENSG00000125703 ATG4C 582837 sc-eQTL 7.30e-02 0.156 0.0867 0.536 CD4_CTL L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 6.25e-01 -0.0457 0.0934 0.536 CD4_CTL L2
ENSG00000162607 USP1 930672 sc-eQTL 6.95e-01 -0.0349 0.0889 0.536 CD4_CTL L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 8.43e-01 0.0176 0.0888 0.536 CD4_CTL L2
ENSG00000079739 PGM1 -226442 sc-eQTL 2.14e-01 0.0934 0.0748 0.541 CD4_Naive L2
ENSG00000088035 ALG6 -606 sc-eQTL 9.18e-01 -0.00844 0.0816 0.541 CD4_Naive L2
ENSG00000116641 DOCK7 678583 sc-eQTL 6.17e-01 -0.0402 0.0801 0.541 CD4_Naive L2
ENSG00000125703 ATG4C 582837 sc-eQTL 6.80e-01 0.0293 0.0709 0.541 CD4_Naive L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 8.31e-10 -0.509 0.0792 0.541 CD4_Naive L2
ENSG00000162607 USP1 930672 sc-eQTL 3.80e-01 -0.0582 0.0661 0.541 CD4_Naive L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 2.04e-01 -0.109 0.0857 0.541 CD4_Naive L2
ENSG00000079739 PGM1 -226442 sc-eQTL 9.73e-01 0.00271 0.0787 0.541 CD4_TCM L2
ENSG00000088035 ALG6 -606 sc-eQTL 6.41e-01 0.0427 0.0914 0.541 CD4_TCM L2
ENSG00000116641 DOCK7 678583 sc-eQTL 1.36e-01 -0.12 0.0806 0.541 CD4_TCM L2
ENSG00000125703 ATG4C 582837 sc-eQTL 1.59e-01 -0.111 0.0785 0.541 CD4_TCM L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 7.52e-06 -0.407 0.0887 0.541 CD4_TCM L2
ENSG00000162607 USP1 930672 sc-eQTL 9.50e-02 -0.127 0.0757 0.541 CD4_TCM L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 5.41e-03 -0.248 0.0883 0.541 CD4_TCM L2
ENSG00000079739 PGM1 -226442 sc-eQTL 3.05e-02 0.198 0.091 0.541 CD4_TEM L2
ENSG00000088035 ALG6 -606 sc-eQTL 3.98e-01 0.0782 0.0924 0.541 CD4_TEM L2
ENSG00000116641 DOCK7 678583 sc-eQTL 9.57e-01 -0.00484 0.0902 0.541 CD4_TEM L2
ENSG00000125703 ATG4C 582837 sc-eQTL 1.52e-01 0.125 0.0872 0.541 CD4_TEM L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 2.55e-02 -0.201 0.0893 0.541 CD4_TEM L2
ENSG00000162607 USP1 930672 sc-eQTL 1.31e-01 -0.129 0.0852 0.541 CD4_TEM L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 4.84e-01 -0.0657 0.0936 0.541 CD4_TEM L2
ENSG00000079739 PGM1 -226442 sc-eQTL 9.32e-01 0.00719 0.0843 0.541 CD8_CTL L2
ENSG00000088035 ALG6 -606 sc-eQTL 4.23e-02 -0.181 0.0887 0.541 CD8_CTL L2
ENSG00000116641 DOCK7 678583 sc-eQTL 8.28e-01 0.0185 0.085 0.541 CD8_CTL L2
ENSG00000125703 ATG4C 582837 sc-eQTL 2.04e-02 0.209 0.0893 0.541 CD8_CTL L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 4.36e-03 -0.266 0.0923 0.541 CD8_CTL L2
ENSG00000162607 USP1 930672 sc-eQTL 3.01e-01 0.0872 0.0841 0.541 CD8_CTL L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 3.14e-02 -0.207 0.0953 0.541 CD8_CTL L2
ENSG00000079739 PGM1 -226442 sc-eQTL 5.16e-02 0.165 0.0843 0.541 CD8_Naive L2
ENSG00000088035 ALG6 -606 sc-eQTL 5.78e-01 -0.049 0.0879 0.541 CD8_Naive L2
ENSG00000116641 DOCK7 678583 sc-eQTL 3.36e-01 0.0875 0.0908 0.541 CD8_Naive L2
ENSG00000125703 ATG4C 582837 sc-eQTL 1.95e-01 -0.113 0.087 0.541 CD8_Naive L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 1.04e-06 -0.421 0.0836 0.541 CD8_Naive L2
ENSG00000162607 USP1 930672 sc-eQTL 1.73e-01 -0.102 0.0744 0.541 CD8_Naive L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 3.05e-01 -0.0855 0.0832 0.541 CD8_Naive L2
ENSG00000079739 PGM1 -226442 sc-eQTL 8.77e-01 0.0145 0.0937 0.546 CD8_TCM L2
ENSG00000088035 ALG6 -606 sc-eQTL 6.13e-01 -0.048 0.0948 0.546 CD8_TCM L2
ENSG00000116641 DOCK7 678583 sc-eQTL 9.95e-01 -0.000618 0.0926 0.546 CD8_TCM L2
ENSG00000125703 ATG4C 582837 sc-eQTL 4.26e-01 -0.0754 0.0946 0.546 CD8_TCM L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 3.74e-02 -0.191 0.091 0.546 CD8_TCM L2
ENSG00000162607 USP1 930672 sc-eQTL 9.31e-02 -0.148 0.0879 0.546 CD8_TCM L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 7.90e-02 -0.164 0.0931 0.546 CD8_TCM L2
ENSG00000079739 PGM1 -226442 sc-eQTL 7.94e-02 -0.165 0.0937 0.527 CD8_TEM L2
ENSG00000088035 ALG6 -606 sc-eQTL 3.36e-01 -0.0911 0.0945 0.527 CD8_TEM L2
ENSG00000116641 DOCK7 678583 sc-eQTL 7.97e-01 -0.0237 0.0918 0.527 CD8_TEM L2
ENSG00000125703 ATG4C 582837 sc-eQTL 5.87e-02 0.166 0.0875 0.527 CD8_TEM L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 6.97e-01 -0.0372 0.0956 0.527 CD8_TEM L2
ENSG00000162607 USP1 930672 sc-eQTL 3.72e-01 0.0814 0.091 0.527 CD8_TEM L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 1.05e-01 -0.15 0.0921 0.527 CD8_TEM L2
ENSG00000079739 PGM1 -226442 sc-eQTL 8.28e-01 -0.0198 0.0907 0.537 MAIT L2
ENSG00000088035 ALG6 -606 sc-eQTL 6.67e-01 -0.0386 0.0897 0.537 MAIT L2
ENSG00000116641 DOCK7 678583 sc-eQTL 5.94e-01 0.0459 0.0859 0.537 MAIT L2
ENSG00000125703 ATG4C 582837 sc-eQTL 4.55e-02 0.181 0.0898 0.537 MAIT L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 2.25e-02 -0.206 0.0897 0.537 MAIT L2
ENSG00000162607 USP1 930672 sc-eQTL 8.81e-01 0.0135 0.0901 0.537 MAIT L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 6.17e-01 -0.0468 0.0935 0.537 MAIT L2
ENSG00000079739 PGM1 -226442 sc-eQTL 6.39e-01 0.0423 0.0899 0.54 NK_CD56bright L2
ENSG00000088035 ALG6 -606 sc-eQTL 7.20e-02 0.165 0.0915 0.54 NK_CD56bright L2
ENSG00000116641 DOCK7 678583 sc-eQTL 4.01e-01 0.0671 0.0798 0.54 NK_CD56bright L2
ENSG00000125703 ATG4C 582837 sc-eQTL 8.25e-01 0.0197 0.0893 0.54 NK_CD56bright L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 4.42e-01 -0.0716 0.0928 0.54 NK_CD56bright L2
ENSG00000162607 USP1 930672 sc-eQTL 6.96e-01 -0.0375 0.0958 0.54 NK_CD56bright L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 1.70e-01 -0.126 0.0913 0.54 NK_CD56bright L2
ENSG00000079739 PGM1 -226442 sc-eQTL 1.42e-01 0.104 0.0709 0.539 NK_CD56dim L2
ENSG00000088035 ALG6 -606 sc-eQTL 2.03e-01 -0.115 0.0901 0.539 NK_CD56dim L2
ENSG00000116641 DOCK7 678583 sc-eQTL 6.28e-01 0.0381 0.0786 0.539 NK_CD56dim L2
ENSG00000125703 ATG4C 582837 sc-eQTL 4.38e-01 -0.062 0.0798 0.539 NK_CD56dim L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 1.31e-01 -0.137 0.0905 0.539 NK_CD56dim L2
ENSG00000162607 USP1 930672 sc-eQTL 9.42e-01 -0.00644 0.0882 0.539 NK_CD56dim L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 3.55e-01 -0.0909 0.098 0.539 NK_CD56dim L2
ENSG00000079739 PGM1 -226442 sc-eQTL 5.24e-01 -0.0623 0.0976 0.541 NK_HLA L2
ENSG00000088035 ALG6 -606 sc-eQTL 3.07e-01 0.104 0.101 0.541 NK_HLA L2
ENSG00000116641 DOCK7 678583 sc-eQTL 7.26e-01 -0.0272 0.0775 0.541 NK_HLA L2
ENSG00000125703 ATG4C 582837 sc-eQTL 2.40e-01 0.106 0.0898 0.541 NK_HLA L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 6.67e-02 -0.173 0.0938 0.541 NK_HLA L2
ENSG00000162607 USP1 930672 sc-eQTL 7.41e-01 0.0328 0.099 0.541 NK_HLA L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 8.10e-01 0.0217 0.0901 0.541 NK_HLA L2
ENSG00000079739 PGM1 -226442 sc-eQTL 6.30e-01 0.0377 0.0781 0.539 NK_cytokine L2
ENSG00000088035 ALG6 -606 sc-eQTL 9.51e-01 -0.00541 0.0883 0.539 NK_cytokine L2
ENSG00000116641 DOCK7 678583 sc-eQTL 3.93e-01 0.0699 0.0816 0.539 NK_cytokine L2
ENSG00000125703 ATG4C 582837 sc-eQTL 1.10e-01 0.134 0.0831 0.539 NK_cytokine L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 4.03e-03 -0.247 0.0849 0.539 NK_cytokine L2
ENSG00000162607 USP1 930672 sc-eQTL 1.76e-01 0.123 0.0907 0.539 NK_cytokine L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 2.85e-01 -0.0988 0.0921 0.539 NK_cytokine L2
ENSG00000079739 PGM1 -226442 sc-eQTL 5.17e-02 -0.217 0.11 0.556 PB L2
ENSG00000088035 ALG6 -606 sc-eQTL 2.79e-01 0.128 0.117 0.556 PB L2
ENSG00000116641 DOCK7 678583 sc-eQTL 2.20e-01 -0.155 0.125 0.556 PB L2
ENSG00000125703 ATG4C 582837 sc-eQTL 3.59e-01 0.101 0.11 0.556 PB L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 1.24e-01 -0.169 0.109 0.556 PB L2
ENSG00000162607 USP1 930672 sc-eQTL 9.13e-01 0.012 0.109 0.556 PB L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 4.19e-01 -0.0976 0.12 0.556 PB L2
ENSG00000079739 PGM1 -226442 sc-eQTL 9.00e-01 0.0106 0.0844 0.539 Pro_T L2
ENSG00000088035 ALG6 -606 sc-eQTL 9.27e-01 0.00791 0.0859 0.539 Pro_T L2
ENSG00000116641 DOCK7 678583 sc-eQTL 2.52e-01 -0.0987 0.0859 0.539 Pro_T L2
ENSG00000125703 ATG4C 582837 sc-eQTL 7.81e-01 -0.021 0.0754 0.539 Pro_T L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 1.64e-01 0.105 0.0753 0.539 Pro_T L2
ENSG00000162607 USP1 930672 sc-eQTL 9.93e-01 -0.000449 0.052 0.539 Pro_T L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 6.47e-01 0.0402 0.0879 0.539 Pro_T L2
ENSG00000079739 PGM1 -226442 sc-eQTL 4.39e-01 0.0681 0.0879 0.541 Treg L2
ENSG00000088035 ALG6 -606 sc-eQTL 2.94e-01 0.0986 0.0938 0.541 Treg L2
ENSG00000116641 DOCK7 678583 sc-eQTL 1.47e-01 0.125 0.0859 0.541 Treg L2
ENSG00000125703 ATG4C 582837 sc-eQTL 2.71e-01 0.0972 0.088 0.541 Treg L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 6.95e-01 -0.0362 0.0923 0.541 Treg L2
ENSG00000162607 USP1 930672 sc-eQTL 2.78e-01 0.0968 0.0891 0.541 Treg L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 5.65e-01 -0.0509 0.0883 0.541 Treg L2
ENSG00000079739 PGM1 -226442 sc-eQTL 8.46e-01 0.0171 0.0879 0.539 cDC L2
ENSG00000088035 ALG6 -606 sc-eQTL 1.46e-01 -0.13 0.0887 0.539 cDC L2
ENSG00000116641 DOCK7 678583 sc-eQTL 4.46e-01 0.0668 0.0874 0.539 cDC L2
ENSG00000125703 ATG4C 582837 sc-eQTL 3.73e-01 0.0678 0.0758 0.539 cDC L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 4.30e-01 0.0761 0.0962 0.539 cDC L2
ENSG00000162607 USP1 930672 sc-eQTL 2.84e-01 -0.0919 0.0855 0.539 cDC L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 3.93e-01 -0.0661 0.0773 0.539 cDC L2
ENSG00000079739 PGM1 -226442 sc-eQTL 9.89e-01 0.00112 0.0834 0.541 cMono_IL1B L2
ENSG00000088035 ALG6 -606 sc-eQTL 3.17e-01 0.0835 0.0833 0.541 cMono_IL1B L2
ENSG00000116641 DOCK7 678583 sc-eQTL 3.36e-01 -0.0846 0.0878 0.541 cMono_IL1B L2
ENSG00000125703 ATG4C 582837 sc-eQTL 4.86e-01 0.0432 0.0618 0.541 cMono_IL1B L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 3.73e-06 -0.396 0.0833 0.541 cMono_IL1B L2
ENSG00000162607 USP1 930672 sc-eQTL 6.63e-01 -0.0338 0.0773 0.541 cMono_IL1B L2
ENSG00000079739 PGM1 -226442 sc-eQTL 4.75e-01 0.0666 0.093 0.541 cMono_S100A L2
ENSG00000088035 ALG6 -606 sc-eQTL 8.49e-01 0.018 0.0944 0.541 cMono_S100A L2
ENSG00000116641 DOCK7 678583 sc-eQTL 4.17e-01 0.071 0.0874 0.541 cMono_S100A L2
ENSG00000125703 ATG4C 582837 sc-eQTL 5.83e-01 0.0416 0.0757 0.541 cMono_S100A L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 7.38e-02 -0.152 0.0848 0.541 cMono_S100A L2
ENSG00000162607 USP1 930672 sc-eQTL 1.02e-01 -0.144 0.0874 0.541 cMono_S100A L2
ENSG00000079739 PGM1 -226442 sc-eQTL 4.54e-01 0.0776 0.103 0.548 gdT L2
ENSG00000088035 ALG6 -606 sc-eQTL 4.60e-01 -0.0818 0.11 0.548 gdT L2
ENSG00000116641 DOCK7 678583 sc-eQTL 4.59e-02 0.215 0.107 0.548 gdT L2
ENSG00000125703 ATG4C 582837 sc-eQTL 3.58e-01 0.0952 0.103 0.548 gdT L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 9.30e-02 -0.184 0.109 0.548 gdT L2
ENSG00000162607 USP1 930672 sc-eQTL 4.96e-01 -0.071 0.104 0.548 gdT L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 5.44e-01 0.0658 0.108 0.548 gdT L2
ENSG00000079739 PGM1 -226442 sc-eQTL 4.60e-01 0.0696 0.0941 0.54 intMono L2
ENSG00000088035 ALG6 -606 sc-eQTL 7.08e-01 -0.0329 0.0877 0.54 intMono L2
ENSG00000116641 DOCK7 678583 sc-eQTL 5.43e-01 -0.0545 0.0895 0.54 intMono L2
ENSG00000125703 ATG4C 582837 sc-eQTL 9.35e-02 0.143 0.0849 0.54 intMono L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 2.23e-02 -0.214 0.093 0.54 intMono L2
ENSG00000162607 USP1 930672 sc-eQTL 7.31e-01 -0.033 0.0958 0.54 intMono L2
ENSG00000079739 PGM1 -226442 sc-eQTL 6.52e-01 0.0384 0.085 0.545 ncMono L2
ENSG00000088035 ALG6 -606 sc-eQTL 3.94e-01 -0.0797 0.0933 0.545 ncMono L2
ENSG00000116641 DOCK7 678583 sc-eQTL 8.25e-01 0.0204 0.0919 0.545 ncMono L2
ENSG00000125703 ATG4C 582837 sc-eQTL 3.16e-01 -0.0861 0.0857 0.545 ncMono L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 5.83e-02 -0.17 0.089 0.545 ncMono L2
ENSG00000162607 USP1 930672 sc-eQTL 5.35e-01 0.057 0.0917 0.545 ncMono L2
ENSG00000079739 PGM1 -226442 sc-eQTL 5.24e-01 -0.0645 0.101 0.531 pDC L2
ENSG00000088035 ALG6 -606 sc-eQTL 5.21e-01 0.0631 0.0982 0.531 pDC L2
ENSG00000116641 DOCK7 678583 sc-eQTL 5.43e-01 -0.0612 0.1 0.531 pDC L2
ENSG00000125703 ATG4C 582837 sc-eQTL 9.52e-01 -0.00542 0.0901 0.531 pDC L2
ENSG00000142856 ITGB3BP -226752 sc-eQTL 6.65e-01 -0.0438 0.101 0.531 pDC L2
ENSG00000162607 USP1 930672 sc-eQTL 1.77e-01 0.139 0.102 0.531 pDC L2
ENSG00000203965 EFCAB7 -156403 sc-eQTL 7.74e-01 -0.0257 0.0895 0.531 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -226442 sc-eQTL 1.02e-01 0.142 0.0862 0.541 B_Memory LOneK1K
ENSG00000088035 ALG6 -606 sc-eQTL 3.13e-01 -0.0967 0.0957 0.541 B_Memory LOneK1K
ENSG00000116641 DOCK7 678583 sc-eQTL 3.59e-01 -0.0763 0.0831 0.541 B_Memory LOneK1K
ENSG00000125703 ATG4C 582837 sc-eQTL 2.81e-01 0.0725 0.0671 0.541 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -226752 sc-eQTL 1.21e-03 -0.283 0.0863 0.541 B_Memory LOneK1K
ENSG00000162607 USP1 930672 sc-eQTL 8.19e-01 0.0197 0.0858 0.541 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -156403 sc-eQTL 3.80e-05 -0.373 0.0885 0.541 B_Memory LOneK1K
ENSG00000079739 PGM1 -226442 sc-eQTL 4.04e-02 0.183 0.0887 0.541 B_Naive LOneK1K
ENSG00000088035 ALG6 -606 sc-eQTL 8.14e-01 0.0218 0.0923 0.541 B_Naive LOneK1K
ENSG00000116641 DOCK7 678583 sc-eQTL 5.30e-01 -0.0541 0.0861 0.541 B_Naive LOneK1K
ENSG00000125703 ATG4C 582837 sc-eQTL 3.91e-01 -0.0564 0.0657 0.541 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -226752 sc-eQTL 2.38e-05 -0.385 0.0891 0.541 B_Naive LOneK1K
ENSG00000162607 USP1 930672 sc-eQTL 2.53e-01 0.0912 0.0796 0.541 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -156403 sc-eQTL 5.45e-01 -0.0566 0.0934 0.541 B_Naive LOneK1K
ENSG00000079739 PGM1 -226442 sc-eQTL 7.01e-01 0.0329 0.0856 0.541 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -606 sc-eQTL 4.31e-01 0.0654 0.0828 0.541 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 678583 sc-eQTL 6.41e-01 -0.039 0.0835 0.541 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 582837 sc-eQTL 4.82e-01 0.0406 0.0577 0.541 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -226752 sc-eQTL 1.08e-05 -0.368 0.0816 0.541 CD14_Mono LOneK1K
ENSG00000162607 USP1 930672 sc-eQTL 9.50e-02 -0.122 0.0725 0.541 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -226442 sc-eQTL 6.17e-01 0.0413 0.0823 0.539 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -606 sc-eQTL 8.99e-01 -0.0118 0.0935 0.539 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 678583 sc-eQTL 4.01e-01 -0.0777 0.0924 0.539 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 582837 sc-eQTL 5.77e-01 0.0441 0.0788 0.539 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -226752 sc-eQTL 8.83e-04 -0.301 0.0892 0.539 CD16_Mono LOneK1K
ENSG00000162607 USP1 930672 sc-eQTL 8.44e-01 -0.0169 0.0861 0.539 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -226442 sc-eQTL 3.27e-01 0.0684 0.0696 0.539 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -606 sc-eQTL 5.67e-01 -0.048 0.0837 0.539 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 678583 sc-eQTL 3.40e-01 0.0717 0.0749 0.539 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 582837 sc-eQTL 3.41e-01 0.0714 0.0748 0.539 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -226752 sc-eQTL 2.72e-03 -0.264 0.0869 0.539 NK_CD56dim LOneK1K
ENSG00000162607 USP1 930672 sc-eQTL 6.06e-01 0.0416 0.0806 0.539 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -156403 sc-eQTL 1.48e-01 -0.142 0.0976 0.539 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -226442 eQTL 4.06e-13 0.126 0.0172 0.0 0.0 0.469
ENSG00000088035 ALG6 -606 eQTL 0.000119 0.0502 0.013 0.0 0.0 0.469
ENSG00000116641 DOCK7 678601 eQTL 0.00442 -0.0621 0.0218 0.00339 0.0 0.469
ENSG00000116652 DLEU2L -180113 eQTL 0.0344 -0.0541 0.0256 0.0 0.0 0.469
ENSG00000185483 ROR1 -407048 pQTL 0.0324 0.0281 0.0131 0.0 0.0 0.463
ENSG00000203965 EFCAB7 -156403 eQTL 3.74e-04 -0.0841 0.0236 0.0 0.0 0.469

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -226442 1.26e-06 1.33e-06 2.91e-07 1.14e-06 2.43e-07 4.7e-07 1.24e-06 3.26e-07 1.48e-06 4.24e-07 2.03e-06 6.2e-07 2.51e-06 2.98e-07 4.41e-07 7.54e-07 9.26e-07 7.78e-07 5.34e-07 5.62e-07 4.43e-07 1.33e-06 9.22e-07 4.61e-07 2.41e-06 4.17e-07 7.73e-07 6.93e-07 1.15e-06 1.04e-06 7.32e-07 2.53e-07 1.5e-07 5.82e-07 5.31e-07 3.36e-07 5.03e-07 1.24e-07 3.35e-07 8.82e-08 2.56e-07 1.65e-06 1.22e-07 1.8e-07 1.89e-07 1.97e-07 1.9e-07 4.88e-08 5.63e-08
ENSG00000162607 \N 930672 2.6e-07 1.06e-07 3.35e-08 1.76e-07 1.02e-07 9.36e-08 1.39e-07 5.21e-08 1.37e-07 4.23e-08 1.63e-07 7.6e-08 1.27e-07 6.21e-08 4.89e-08 7.87e-08 4.94e-08 1.07e-07 5.22e-08 3.29e-08 1.06e-07 1.33e-07 1.31e-07 4.99e-08 1.29e-07 1.13e-07 1.13e-07 8.71e-08 1.03e-07 1.1e-07 9.75e-08 3.95e-08 2.74e-08 8.25e-08 9.02e-08 4.02e-08 4.85e-08 9.26e-08 8.19e-08 3.59e-08 3.82e-08 1.37e-07 4.01e-08 1.86e-08 9.88e-08 1.72e-08 1.35e-07 4.26e-09 4.85e-08