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Genes within 1Mb (chr1:63226333:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -367078 sc-eQTL 6.87e-02 -0.145 0.079 0.286 B L1
ENSG00000088035 ALG6 -141242 sc-eQTL 1.03e-02 -0.21 0.0813 0.286 B L1
ENSG00000116641 DOCK7 537947 sc-eQTL 8.51e-01 0.0155 0.0825 0.286 B L1
ENSG00000125703 ATG4C 442201 sc-eQTL 9.17e-01 -0.006 0.0574 0.286 B L1
ENSG00000142856 ITGB3BP -367388 sc-eQTL 4.00e-01 -0.0769 0.0911 0.286 B L1
ENSG00000162607 USP1 790036 sc-eQTL 4.35e-01 -0.0618 0.0791 0.286 B L1
ENSG00000203965 EFCAB7 -297039 sc-eQTL 9.41e-01 -0.00695 0.0935 0.286 B L1
ENSG00000079739 PGM1 -367078 sc-eQTL 7.37e-01 -0.0226 0.0673 0.286 CD4T L1
ENSG00000088035 ALG6 -141242 sc-eQTL 2.65e-01 0.0829 0.0741 0.286 CD4T L1
ENSG00000116641 DOCK7 537947 sc-eQTL 7.99e-01 0.0192 0.0753 0.286 CD4T L1
ENSG00000125703 ATG4C 442201 sc-eQTL 2.49e-01 0.07 0.0606 0.286 CD4T L1
ENSG00000142856 ITGB3BP -367388 sc-eQTL 1.30e-01 -0.13 0.0858 0.286 CD4T L1
ENSG00000162607 USP1 790036 sc-eQTL 8.08e-01 0.0144 0.059 0.286 CD4T L1
ENSG00000203965 EFCAB7 -297039 sc-eQTL 4.84e-01 0.0543 0.0774 0.286 CD4T L1
ENSG00000079739 PGM1 -367078 sc-eQTL 2.46e-01 -0.0873 0.0751 0.286 CD8T L1
ENSG00000088035 ALG6 -141242 sc-eQTL 5.39e-01 0.051 0.0829 0.286 CD8T L1
ENSG00000116641 DOCK7 537947 sc-eQTL 1.84e-01 0.112 0.0837 0.286 CD8T L1
ENSG00000125703 ATG4C 442201 sc-eQTL 7.15e-01 -0.0292 0.0799 0.286 CD8T L1
ENSG00000142856 ITGB3BP -367388 sc-eQTL 8.53e-01 0.0166 0.0893 0.286 CD8T L1
ENSG00000162607 USP1 790036 sc-eQTL 2.85e-01 -0.0745 0.0694 0.286 CD8T L1
ENSG00000203965 EFCAB7 -297039 sc-eQTL 7.82e-01 -0.0247 0.089 0.286 CD8T L1
ENSG00000079739 PGM1 -367078 sc-eQTL 5.77e-01 0.0474 0.0849 0.282 DC L1
ENSG00000088035 ALG6 -141242 sc-eQTL 9.54e-01 0.00506 0.0877 0.282 DC L1
ENSG00000116641 DOCK7 537947 sc-eQTL 5.18e-01 0.0581 0.0898 0.282 DC L1
ENSG00000125703 ATG4C 442201 sc-eQTL 4.32e-02 0.142 0.0696 0.282 DC L1
ENSG00000142856 ITGB3BP -367388 sc-eQTL 4.95e-01 -0.0671 0.0982 0.282 DC L1
ENSG00000162607 USP1 790036 sc-eQTL 4.70e-01 -0.0621 0.0857 0.282 DC L1
ENSG00000203965 EFCAB7 -297039 sc-eQTL 5.67e-01 0.049 0.0855 0.282 DC L1
ENSG00000079739 PGM1 -367078 sc-eQTL 6.39e-01 -0.0386 0.0821 0.286 Mono L1
ENSG00000088035 ALG6 -141242 sc-eQTL 6.79e-01 0.0355 0.0857 0.286 Mono L1
ENSG00000116641 DOCK7 537947 sc-eQTL 2.60e-01 0.0934 0.0826 0.286 Mono L1
ENSG00000125703 ATG4C 442201 sc-eQTL 9.90e-01 0.000699 0.056 0.286 Mono L1
ENSG00000142856 ITGB3BP -367388 sc-eQTL 8.95e-01 -0.0117 0.0885 0.286 Mono L1
ENSG00000162607 USP1 790036 sc-eQTL 4.89e-01 -0.0504 0.0726 0.286 Mono L1
ENSG00000079739 PGM1 -367078 sc-eQTL 9.30e-01 0.00612 0.0696 0.285 NK L1
ENSG00000088035 ALG6 -141242 sc-eQTL 8.18e-01 -0.0188 0.0816 0.285 NK L1
ENSG00000116641 DOCK7 537947 sc-eQTL 4.81e-01 0.0474 0.0671 0.285 NK L1
ENSG00000125703 ATG4C 442201 sc-eQTL 4.76e-01 -0.0514 0.0721 0.285 NK L1
ENSG00000142856 ITGB3BP -367388 sc-eQTL 5.46e-01 0.0542 0.0897 0.285 NK L1
ENSG00000162607 USP1 790036 sc-eQTL 7.96e-01 -0.0208 0.0802 0.285 NK L1
ENSG00000203965 EFCAB7 -297039 sc-eQTL 5.71e-01 -0.0552 0.0974 0.285 NK L1
ENSG00000079739 PGM1 -367078 sc-eQTL 7.58e-01 -0.0246 0.0796 0.286 Other_T L1
ENSG00000088035 ALG6 -141242 sc-eQTL 3.06e-01 -0.082 0.0798 0.286 Other_T L1
ENSG00000116641 DOCK7 537947 sc-eQTL 8.58e-01 -0.0146 0.0817 0.286 Other_T L1
ENSG00000125703 ATG4C 442201 sc-eQTL 4.59e-01 -0.0524 0.0706 0.286 Other_T L1
ENSG00000142856 ITGB3BP -367388 sc-eQTL 8.21e-01 0.0142 0.0627 0.286 Other_T L1
ENSG00000162607 USP1 790036 sc-eQTL 9.07e-01 -0.00637 0.0544 0.286 Other_T L1
ENSG00000203965 EFCAB7 -297039 sc-eQTL 9.64e-02 -0.161 0.0961 0.286 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -367078 sc-eQTL 9.25e-01 -0.00992 0.106 0.296 B_Activated L2
ENSG00000088035 ALG6 -141242 sc-eQTL 7.74e-01 -0.0291 0.101 0.296 B_Activated L2
ENSG00000116641 DOCK7 537947 sc-eQTL 3.99e-01 0.0798 0.0943 0.296 B_Activated L2
ENSG00000125703 ATG4C 442201 sc-eQTL 4.25e-01 -0.0794 0.0992 0.296 B_Activated L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 3.35e-01 0.0936 0.0968 0.296 B_Activated L2
ENSG00000162607 USP1 790036 sc-eQTL 3.54e-02 0.22 0.104 0.296 B_Activated L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 5.41e-01 -0.0562 0.0918 0.296 B_Activated L2
ENSG00000079739 PGM1 -367078 sc-eQTL 1.93e-01 -0.124 0.0948 0.288 B_Intermediate L2
ENSG00000088035 ALG6 -141242 sc-eQTL 3.80e-01 -0.0849 0.0965 0.288 B_Intermediate L2
ENSG00000116641 DOCK7 537947 sc-eQTL 6.44e-01 -0.0427 0.0923 0.288 B_Intermediate L2
ENSG00000125703 ATG4C 442201 sc-eQTL 3.76e-01 0.0692 0.0781 0.288 B_Intermediate L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 8.76e-01 -0.0145 0.0931 0.288 B_Intermediate L2
ENSG00000162607 USP1 790036 sc-eQTL 4.35e-01 -0.0727 0.0929 0.288 B_Intermediate L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 5.30e-01 -0.0579 0.0922 0.288 B_Intermediate L2
ENSG00000079739 PGM1 -367078 sc-eQTL 7.88e-02 -0.162 0.0919 0.289 B_Memory L2
ENSG00000088035 ALG6 -141242 sc-eQTL 2.09e-03 -0.287 0.092 0.289 B_Memory L2
ENSG00000116641 DOCK7 537947 sc-eQTL 8.66e-01 -0.0149 0.0883 0.289 B_Memory L2
ENSG00000125703 ATG4C 442201 sc-eQTL 4.00e-01 0.0707 0.0838 0.289 B_Memory L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 7.56e-02 -0.17 0.0953 0.289 B_Memory L2
ENSG00000162607 USP1 790036 sc-eQTL 1.50e-01 -0.139 0.0964 0.289 B_Memory L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 6.94e-01 0.0376 0.0953 0.289 B_Memory L2
ENSG00000079739 PGM1 -367078 sc-eQTL 4.96e-01 -0.064 0.0939 0.286 B_Naive1 L2
ENSG00000088035 ALG6 -141242 sc-eQTL 2.15e-02 -0.216 0.0932 0.286 B_Naive1 L2
ENSG00000116641 DOCK7 537947 sc-eQTL 3.34e-01 0.0874 0.0903 0.286 B_Naive1 L2
ENSG00000125703 ATG4C 442201 sc-eQTL 2.11e-01 0.0871 0.0694 0.286 B_Naive1 L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 8.95e-01 0.0122 0.0924 0.286 B_Naive1 L2
ENSG00000162607 USP1 790036 sc-eQTL 8.82e-01 0.0121 0.0813 0.286 B_Naive1 L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 8.46e-01 -0.0192 0.0986 0.286 B_Naive1 L2
ENSG00000079739 PGM1 -367078 sc-eQTL 4.60e-01 -0.0688 0.0929 0.288 B_Naive2 L2
ENSG00000088035 ALG6 -141242 sc-eQTL 1.88e-01 0.128 0.0966 0.288 B_Naive2 L2
ENSG00000116641 DOCK7 537947 sc-eQTL 8.82e-01 0.0138 0.0933 0.288 B_Naive2 L2
ENSG00000125703 ATG4C 442201 sc-eQTL 7.38e-01 0.03 0.0897 0.288 B_Naive2 L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 9.58e-02 -0.162 0.0967 0.288 B_Naive2 L2
ENSG00000162607 USP1 790036 sc-eQTL 3.85e-01 -0.0805 0.0925 0.288 B_Naive2 L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 5.57e-01 -0.057 0.0968 0.288 B_Naive2 L2
ENSG00000079739 PGM1 -367078 sc-eQTL 9.27e-02 0.156 0.0921 0.291 CD4_CTL L2
ENSG00000088035 ALG6 -141242 sc-eQTL 2.17e-02 -0.224 0.0967 0.291 CD4_CTL L2
ENSG00000116641 DOCK7 537947 sc-eQTL 8.32e-01 0.0182 0.0857 0.291 CD4_CTL L2
ENSG00000125703 ATG4C 442201 sc-eQTL 4.24e-01 0.0709 0.0886 0.291 CD4_CTL L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 7.73e-01 -0.0274 0.0948 0.291 CD4_CTL L2
ENSG00000162607 USP1 790036 sc-eQTL 2.69e-01 0.0998 0.09 0.291 CD4_CTL L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 2.21e-01 0.11 0.0898 0.291 CD4_CTL L2
ENSG00000079739 PGM1 -367078 sc-eQTL 5.95e-01 -0.0404 0.0759 0.286 CD4_Naive L2
ENSG00000088035 ALG6 -141242 sc-eQTL 7.87e-02 0.145 0.0818 0.286 CD4_Naive L2
ENSG00000116641 DOCK7 537947 sc-eQTL 7.33e-01 -0.0277 0.081 0.286 CD4_Naive L2
ENSG00000125703 ATG4C 442201 sc-eQTL 6.16e-01 0.036 0.0716 0.286 CD4_Naive L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 1.20e-01 -0.136 0.087 0.286 CD4_Naive L2
ENSG00000162607 USP1 790036 sc-eQTL 7.63e-01 0.0202 0.0669 0.286 CD4_Naive L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 5.14e-01 0.0567 0.0868 0.286 CD4_Naive L2
ENSG00000079739 PGM1 -367078 sc-eQTL 1.26e-01 -0.12 0.0782 0.286 CD4_TCM L2
ENSG00000088035 ALG6 -141242 sc-eQTL 7.61e-01 -0.0278 0.0913 0.286 CD4_TCM L2
ENSG00000116641 DOCK7 537947 sc-eQTL 8.49e-01 0.0154 0.0809 0.286 CD4_TCM L2
ENSG00000125703 ATG4C 442201 sc-eQTL 2.33e-01 0.0939 0.0785 0.286 CD4_TCM L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 6.36e-01 -0.044 0.0928 0.286 CD4_TCM L2
ENSG00000162607 USP1 790036 sc-eQTL 2.56e-01 -0.0864 0.0759 0.286 CD4_TCM L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 8.21e-01 0.0204 0.0899 0.286 CD4_TCM L2
ENSG00000079739 PGM1 -367078 sc-eQTL 4.36e-01 0.0741 0.0949 0.286 CD4_TEM L2
ENSG00000088035 ALG6 -141242 sc-eQTL 7.69e-01 -0.028 0.0955 0.286 CD4_TEM L2
ENSG00000116641 DOCK7 537947 sc-eQTL 5.95e-01 0.0495 0.093 0.286 CD4_TEM L2
ENSG00000125703 ATG4C 442201 sc-eQTL 3.95e-01 -0.077 0.0903 0.286 CD4_TEM L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 4.82e-01 -0.0657 0.0932 0.286 CD4_TEM L2
ENSG00000162607 USP1 790036 sc-eQTL 2.31e-01 0.106 0.0881 0.286 CD4_TEM L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 5.18e-01 0.0626 0.0966 0.286 CD4_TEM L2
ENSG00000079739 PGM1 -367078 sc-eQTL 7.09e-01 0.0321 0.0859 0.286 CD8_CTL L2
ENSG00000088035 ALG6 -141242 sc-eQTL 6.26e-01 -0.0446 0.0913 0.286 CD8_CTL L2
ENSG00000116641 DOCK7 537947 sc-eQTL 5.92e-01 0.0466 0.0867 0.286 CD8_CTL L2
ENSG00000125703 ATG4C 442201 sc-eQTL 4.11e-01 -0.0759 0.0922 0.286 CD8_CTL L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 6.73e-01 -0.0406 0.0959 0.286 CD8_CTL L2
ENSG00000162607 USP1 790036 sc-eQTL 1.61e-01 -0.12 0.0856 0.286 CD8_CTL L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 9.22e-01 0.00958 0.0983 0.286 CD8_CTL L2
ENSG00000079739 PGM1 -367078 sc-eQTL 8.67e-01 0.0144 0.0861 0.286 CD8_Naive L2
ENSG00000088035 ALG6 -141242 sc-eQTL 1.38e-01 0.132 0.0887 0.286 CD8_Naive L2
ENSG00000116641 DOCK7 537947 sc-eQTL 7.49e-01 0.0295 0.0922 0.286 CD8_Naive L2
ENSG00000125703 ATG4C 442201 sc-eQTL 3.07e-01 0.0904 0.0883 0.286 CD8_Naive L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 9.17e-01 0.00939 0.0896 0.286 CD8_Naive L2
ENSG00000162607 USP1 790036 sc-eQTL 7.97e-01 0.0195 0.0757 0.286 CD8_Naive L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 8.76e-01 0.0132 0.0845 0.286 CD8_Naive L2
ENSG00000079739 PGM1 -367078 sc-eQTL 6.34e-01 0.0455 0.0955 0.285 CD8_TCM L2
ENSG00000088035 ALG6 -141242 sc-eQTL 4.46e-02 0.194 0.0958 0.285 CD8_TCM L2
ENSG00000116641 DOCK7 537947 sc-eQTL 3.08e-01 0.0963 0.0942 0.285 CD8_TCM L2
ENSG00000125703 ATG4C 442201 sc-eQTL 3.45e-01 0.0912 0.0964 0.285 CD8_TCM L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 8.96e-01 0.0122 0.0938 0.285 CD8_TCM L2
ENSG00000162607 USP1 790036 sc-eQTL 2.01e-01 -0.115 0.0899 0.285 CD8_TCM L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 7.17e-01 -0.0348 0.0956 0.285 CD8_TCM L2
ENSG00000079739 PGM1 -367078 sc-eQTL 7.79e-03 -0.25 0.093 0.29 CD8_TEM L2
ENSG00000088035 ALG6 -141242 sc-eQTL 2.80e-01 -0.103 0.0947 0.29 CD8_TEM L2
ENSG00000116641 DOCK7 537947 sc-eQTL 8.43e-01 -0.0182 0.0921 0.29 CD8_TEM L2
ENSG00000125703 ATG4C 442201 sc-eQTL 9.94e-01 0.000719 0.0885 0.29 CD8_TEM L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 6.75e-01 -0.0402 0.0958 0.29 CD8_TEM L2
ENSG00000162607 USP1 790036 sc-eQTL 6.92e-01 -0.0363 0.0914 0.29 CD8_TEM L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 7.31e-02 -0.166 0.0922 0.29 CD8_TEM L2
ENSG00000079739 PGM1 -367078 sc-eQTL 1.57e-01 -0.129 0.0905 0.288 MAIT L2
ENSG00000088035 ALG6 -141242 sc-eQTL 1.43e-01 -0.132 0.0895 0.288 MAIT L2
ENSG00000116641 DOCK7 537947 sc-eQTL 9.23e-01 -0.00833 0.0862 0.288 MAIT L2
ENSG00000125703 ATG4C 442201 sc-eQTL 6.49e-01 0.0414 0.0909 0.288 MAIT L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 4.53e-01 -0.0683 0.091 0.288 MAIT L2
ENSG00000162607 USP1 790036 sc-eQTL 3.20e-01 -0.0899 0.0902 0.288 MAIT L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 1.03e-01 -0.153 0.0932 0.288 MAIT L2
ENSG00000079739 PGM1 -367078 sc-eQTL 8.05e-01 0.0224 0.0903 0.291 NK_CD56bright L2
ENSG00000088035 ALG6 -141242 sc-eQTL 8.18e-01 -0.0213 0.0926 0.291 NK_CD56bright L2
ENSG00000116641 DOCK7 537947 sc-eQTL 9.49e-01 -0.00516 0.0802 0.291 NK_CD56bright L2
ENSG00000125703 ATG4C 442201 sc-eQTL 4.53e-01 -0.0672 0.0895 0.291 NK_CD56bright L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 5.30e-01 0.0586 0.0932 0.291 NK_CD56bright L2
ENSG00000162607 USP1 790036 sc-eQTL 1.20e-02 0.24 0.0948 0.291 NK_CD56bright L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 2.59e-01 -0.104 0.0918 0.291 NK_CD56bright L2
ENSG00000079739 PGM1 -367078 sc-eQTL 7.39e-01 0.0242 0.0727 0.287 NK_CD56dim L2
ENSG00000088035 ALG6 -141242 sc-eQTL 1.77e-01 -0.125 0.0918 0.287 NK_CD56dim L2
ENSG00000116641 DOCK7 537947 sc-eQTL 3.32e-01 -0.0779 0.0801 0.287 NK_CD56dim L2
ENSG00000125703 ATG4C 442201 sc-eQTL 8.12e-01 -0.0194 0.0815 0.287 NK_CD56dim L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 6.90e-01 0.037 0.0927 0.287 NK_CD56dim L2
ENSG00000162607 USP1 790036 sc-eQTL 5.60e-01 -0.0525 0.0899 0.287 NK_CD56dim L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 5.67e-01 0.0574 0.1 0.287 NK_CD56dim L2
ENSG00000079739 PGM1 -367078 sc-eQTL 6.77e-01 -0.0407 0.0975 0.292 NK_HLA L2
ENSG00000088035 ALG6 -141242 sc-eQTL 3.15e-01 0.102 0.101 0.292 NK_HLA L2
ENSG00000116641 DOCK7 537947 sc-eQTL 4.53e-01 -0.0581 0.0773 0.292 NK_HLA L2
ENSG00000125703 ATG4C 442201 sc-eQTL 5.77e-01 0.0503 0.0899 0.292 NK_HLA L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 2.91e-01 0.0998 0.0942 0.292 NK_HLA L2
ENSG00000162607 USP1 790036 sc-eQTL 4.59e-01 0.0732 0.0987 0.292 NK_HLA L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 9.12e-01 -0.00995 0.09 0.292 NK_HLA L2
ENSG00000079739 PGM1 -367078 sc-eQTL 7.17e-01 -0.0287 0.079 0.287 NK_cytokine L2
ENSG00000088035 ALG6 -141242 sc-eQTL 6.70e-01 0.0381 0.0893 0.287 NK_cytokine L2
ENSG00000116641 DOCK7 537947 sc-eQTL 7.35e-02 0.148 0.0821 0.287 NK_cytokine L2
ENSG00000125703 ATG4C 442201 sc-eQTL 7.95e-01 -0.022 0.0846 0.287 NK_cytokine L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 7.59e-01 -0.0269 0.0877 0.287 NK_cytokine L2
ENSG00000162607 USP1 790036 sc-eQTL 6.38e-01 -0.0434 0.0921 0.287 NK_cytokine L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 2.60e-01 -0.105 0.0931 0.287 NK_cytokine L2
ENSG00000079739 PGM1 -367078 sc-eQTL 3.73e-01 -0.105 0.117 0.27 PB L2
ENSG00000088035 ALG6 -141242 sc-eQTL 1.78e-01 -0.166 0.123 0.27 PB L2
ENSG00000116641 DOCK7 537947 sc-eQTL 1.93e-01 -0.172 0.131 0.27 PB L2
ENSG00000125703 ATG4C 442201 sc-eQTL 5.78e-01 0.0642 0.115 0.27 PB L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 1.42e-01 0.168 0.114 0.27 PB L2
ENSG00000162607 USP1 790036 sc-eQTL 5.40e-01 0.0703 0.114 0.27 PB L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 7.41e-01 -0.0418 0.126 0.27 PB L2
ENSG00000079739 PGM1 -367078 sc-eQTL 8.79e-01 0.0131 0.0859 0.283 Pro_T L2
ENSG00000088035 ALG6 -141242 sc-eQTL 3.05e-01 -0.0897 0.0872 0.283 Pro_T L2
ENSG00000116641 DOCK7 537947 sc-eQTL 2.62e-01 -0.0982 0.0874 0.283 Pro_T L2
ENSG00000125703 ATG4C 442201 sc-eQTL 7.30e-01 0.0265 0.0767 0.283 Pro_T L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 2.45e-01 0.0894 0.0768 0.283 Pro_T L2
ENSG00000162607 USP1 790036 sc-eQTL 1.14e-01 0.0836 0.0526 0.283 Pro_T L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 3.32e-01 0.0867 0.0893 0.283 Pro_T L2
ENSG00000079739 PGM1 -367078 sc-eQTL 5.50e-01 0.0544 0.0908 0.286 Treg L2
ENSG00000088035 ALG6 -141242 sc-eQTL 1.81e-01 0.13 0.0967 0.286 Treg L2
ENSG00000116641 DOCK7 537947 sc-eQTL 4.11e-01 0.0733 0.089 0.286 Treg L2
ENSG00000125703 ATG4C 442201 sc-eQTL 9.05e-01 0.0109 0.0911 0.286 Treg L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 9.05e-02 -0.161 0.0947 0.286 Treg L2
ENSG00000162607 USP1 790036 sc-eQTL 5.18e-01 0.0597 0.0922 0.286 Treg L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 2.30e-01 0.109 0.0909 0.286 Treg L2
ENSG00000079739 PGM1 -367078 sc-eQTL 4.27e-01 0.071 0.0893 0.295 cDC L2
ENSG00000088035 ALG6 -141242 sc-eQTL 7.00e-01 0.035 0.0906 0.295 cDC L2
ENSG00000116641 DOCK7 537947 sc-eQTL 2.58e-01 0.101 0.0887 0.295 cDC L2
ENSG00000125703 ATG4C 442201 sc-eQTL 1.08e-02 0.195 0.0759 0.295 cDC L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 3.28e-01 -0.0959 0.0977 0.295 cDC L2
ENSG00000162607 USP1 790036 sc-eQTL 6.81e-01 -0.0358 0.0871 0.295 cDC L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 8.01e-01 0.0199 0.0787 0.295 cDC L2
ENSG00000079739 PGM1 -367078 sc-eQTL 1.67e-01 -0.118 0.0853 0.286 cMono_IL1B L2
ENSG00000088035 ALG6 -141242 sc-eQTL 6.09e-01 -0.0439 0.0857 0.286 cMono_IL1B L2
ENSG00000116641 DOCK7 537947 sc-eQTL 6.82e-02 0.164 0.0897 0.286 cMono_IL1B L2
ENSG00000125703 ATG4C 442201 sc-eQTL 6.39e-01 0.0299 0.0636 0.286 cMono_IL1B L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 9.93e-01 0.00084 0.0901 0.286 cMono_IL1B L2
ENSG00000162607 USP1 790036 sc-eQTL 1.48e-01 -0.115 0.0791 0.286 cMono_IL1B L2
ENSG00000079739 PGM1 -367078 sc-eQTL 7.50e-01 0.0302 0.0947 0.286 cMono_S100A L2
ENSG00000088035 ALG6 -141242 sc-eQTL 4.19e-02 0.195 0.0951 0.286 cMono_S100A L2
ENSG00000116641 DOCK7 537947 sc-eQTL 9.45e-01 -0.00614 0.089 0.286 cMono_S100A L2
ENSG00000125703 ATG4C 442201 sc-eQTL 7.19e-01 0.0278 0.077 0.286 cMono_S100A L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 7.93e-01 0.0228 0.0869 0.286 cMono_S100A L2
ENSG00000162607 USP1 790036 sc-eQTL 1.74e-01 0.122 0.0891 0.286 cMono_S100A L2
ENSG00000079739 PGM1 -367078 sc-eQTL 3.06e-01 -0.103 0.1 0.315 gdT L2
ENSG00000088035 ALG6 -141242 sc-eQTL 3.84e-01 -0.0935 0.107 0.315 gdT L2
ENSG00000116641 DOCK7 537947 sc-eQTL 1.00e+00 -5.91e-05 0.105 0.315 gdT L2
ENSG00000125703 ATG4C 442201 sc-eQTL 7.79e-03 -0.265 0.098 0.315 gdT L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 7.42e-01 0.0353 0.107 0.315 gdT L2
ENSG00000162607 USP1 790036 sc-eQTL 8.76e-01 -0.0157 0.101 0.315 gdT L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 1.21e-01 -0.162 0.104 0.315 gdT L2
ENSG00000079739 PGM1 -367078 sc-eQTL 2.25e-01 -0.117 0.0958 0.287 intMono L2
ENSG00000088035 ALG6 -141242 sc-eQTL 8.40e-01 -0.018 0.0895 0.287 intMono L2
ENSG00000116641 DOCK7 537947 sc-eQTL 9.74e-01 -0.00294 0.0915 0.287 intMono L2
ENSG00000125703 ATG4C 442201 sc-eQTL 2.02e-01 -0.111 0.087 0.287 intMono L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 9.28e-01 0.00867 0.0962 0.287 intMono L2
ENSG00000162607 USP1 790036 sc-eQTL 7.56e-01 -0.0304 0.0978 0.287 intMono L2
ENSG00000079739 PGM1 -367078 sc-eQTL 2.71e-01 0.0949 0.0859 0.287 ncMono L2
ENSG00000088035 ALG6 -141242 sc-eQTL 1.82e-01 -0.126 0.0943 0.287 ncMono L2
ENSG00000116641 DOCK7 537947 sc-eQTL 1.85e-01 0.123 0.0928 0.287 ncMono L2
ENSG00000125703 ATG4C 442201 sc-eQTL 8.16e-01 0.0203 0.0871 0.287 ncMono L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 2.80e-01 -0.0983 0.0908 0.287 ncMono L2
ENSG00000162607 USP1 790036 sc-eQTL 5.36e-01 -0.0577 0.093 0.287 ncMono L2
ENSG00000079739 PGM1 -367078 sc-eQTL 8.57e-01 0.0183 0.101 0.302 pDC L2
ENSG00000088035 ALG6 -141242 sc-eQTL 9.59e-01 -0.00506 0.0987 0.302 pDC L2
ENSG00000116641 DOCK7 537947 sc-eQTL 4.26e-01 0.0803 0.101 0.302 pDC L2
ENSG00000125703 ATG4C 442201 sc-eQTL 6.63e-01 -0.0395 0.0904 0.302 pDC L2
ENSG00000142856 ITGB3BP -367388 sc-eQTL 6.94e-01 -0.04 0.101 0.302 pDC L2
ENSG00000162607 USP1 790036 sc-eQTL 8.06e-01 0.0254 0.103 0.302 pDC L2
ENSG00000203965 EFCAB7 -297039 sc-eQTL 4.92e-02 0.176 0.0887 0.302 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -367078 sc-eQTL 1.91e-01 -0.115 0.0874 0.286 B_Memory LOneK1K
ENSG00000088035 ALG6 -141242 sc-eQTL 1.00e-02 -0.248 0.0955 0.286 B_Memory LOneK1K
ENSG00000116641 DOCK7 537947 sc-eQTL 5.77e-01 -0.047 0.0841 0.286 B_Memory LOneK1K
ENSG00000125703 ATG4C 442201 sc-eQTL 7.28e-01 0.0237 0.068 0.286 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -367388 sc-eQTL 3.29e-01 -0.0874 0.0892 0.286 B_Memory LOneK1K
ENSG00000162607 USP1 790036 sc-eQTL 5.57e-01 -0.0511 0.0867 0.286 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -297039 sc-eQTL 9.26e-01 -0.00863 0.0932 0.286 B_Memory LOneK1K
ENSG00000079739 PGM1 -367078 sc-eQTL 2.16e-01 -0.113 0.0914 0.286 B_Naive LOneK1K
ENSG00000088035 ALG6 -141242 sc-eQTL 2.35e-01 -0.112 0.0941 0.286 B_Naive LOneK1K
ENSG00000116641 DOCK7 537947 sc-eQTL 2.02e-01 0.113 0.0879 0.286 B_Naive LOneK1K
ENSG00000125703 ATG4C 442201 sc-eQTL 4.21e-01 0.0542 0.0672 0.286 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -367388 sc-eQTL 4.84e-01 -0.0666 0.0951 0.286 B_Naive LOneK1K
ENSG00000162607 USP1 790036 sc-eQTL 4.64e-01 -0.0599 0.0817 0.286 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -297039 sc-eQTL 8.01e-01 -0.0241 0.0956 0.286 B_Naive LOneK1K
ENSG00000079739 PGM1 -367078 sc-eQTL 7.69e-01 -0.0256 0.087 0.286 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -141242 sc-eQTL 7.01e-01 0.0324 0.0843 0.286 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 537947 sc-eQTL 2.17e-01 0.105 0.0846 0.286 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 442201 sc-eQTL 6.43e-01 0.0272 0.0586 0.286 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -367388 sc-eQTL 9.85e-01 0.00165 0.0868 0.286 CD14_Mono LOneK1K
ENSG00000162607 USP1 790036 sc-eQTL 8.73e-01 -0.0118 0.0742 0.286 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -367078 sc-eQTL 3.43e-01 -0.0797 0.0839 0.282 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -141242 sc-eQTL 2.78e-01 -0.104 0.0952 0.282 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 537947 sc-eQTL 6.11e-01 0.0481 0.0944 0.282 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 442201 sc-eQTL 8.92e-01 -0.011 0.0805 0.282 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -367388 sc-eQTL 8.18e-01 -0.0216 0.0935 0.282 CD16_Mono LOneK1K
ENSG00000162607 USP1 790036 sc-eQTL 2.61e-01 -0.0988 0.0876 0.282 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -367078 sc-eQTL 7.99e-01 0.0181 0.0708 0.287 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -141242 sc-eQTL 8.05e-01 -0.021 0.0851 0.287 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 537947 sc-eQTL 5.24e-01 0.0486 0.0761 0.287 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 442201 sc-eQTL 6.15e-01 -0.0383 0.076 0.287 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -367388 sc-eQTL 8.62e-01 0.0157 0.0902 0.287 NK_CD56dim LOneK1K
ENSG00000162607 USP1 790036 sc-eQTL 2.86e-01 -0.0874 0.0816 0.287 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -297039 sc-eQTL 8.74e-01 -0.0159 0.0996 0.287 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000079739 PGM1 -367078 eQTL 0.0032 -0.0542 0.0183 0.0 0.0 0.355

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000079739 PGM1 -367078 1.25e-06 9.53e-07 3.04e-07 4.03e-07 2.98e-07 4.63e-07 1.22e-06 4.01e-07 1.4e-06 4.36e-07 1.38e-06 6.2e-07 1.73e-06 2.59e-07 4.55e-07 8.79e-07 7.87e-07 6.25e-07 8.41e-07 6.84e-07 6.13e-07 1.36e-06 9.29e-07 6.51e-07 1.94e-06 6.73e-07 8.22e-07 6.46e-07 1.24e-06 1.06e-06 5.58e-07 1.55e-07 2.14e-07 6.86e-07 3.93e-07 4.49e-07 6.08e-07 1.25e-07 3.52e-07 2.48e-07 2.87e-07 1.36e-06 5.49e-08 1.22e-08 1.88e-07 1.01e-07 2.14e-07 8.67e-08 1.56e-07
ENSG00000088035 \N -141242 4.36e-06 4.57e-06 7.3e-07 2.43e-06 1.63e-06 1.33e-06 3.96e-06 1.09e-06 5.16e-06 2.42e-06 4.75e-06 3.37e-06 7.62e-06 2.04e-06 1.37e-06 3.83e-06 2.07e-06 3.53e-06 1.44e-06 1.21e-06 2.96e-06 4.85e-06 4.02e-06 1.73e-06 5.15e-06 2.14e-06 2.42e-06 1.78e-06 4.44e-06 4.04e-06 2.38e-06 4.31e-07 5.55e-07 2.31e-06 2.1e-06 1.16e-06 1.2e-06 4.58e-07 8.97e-07 6.18e-07 9.74e-07 4.81e-06 4.01e-07 1.51e-07 8.11e-07 1.1e-06 1.13e-06 7.35e-07 6.22e-07
ENSG00000142856 \N -367388 1.25e-06 9.53e-07 3.04e-07 4.03e-07 2.98e-07 4.63e-07 1.22e-06 4.01e-07 1.4e-06 4.36e-07 1.38e-06 6.2e-07 1.73e-06 2.59e-07 4.55e-07 8.79e-07 7.87e-07 6.1e-07 8.41e-07 6.84e-07 6.17e-07 1.36e-06 9.29e-07 6.51e-07 1.94e-06 6.73e-07 8.22e-07 6.46e-07 1.24e-06 1.04e-06 5.58e-07 1.55e-07 2.14e-07 6.86e-07 3.93e-07 4.49e-07 5.93e-07 1.25e-07 3.52e-07 2.48e-07 2.87e-07 1.36e-06 5.49e-08 1.22e-08 1.88e-07 1.01e-07 2.14e-07 7.81e-08 1.56e-07