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Genes within 1Mb (chr1:62882885:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -710526 sc-eQTL 3.66e-01 0.0719 0.0794 0.628 B L1
ENSG00000088035 ALG6 -484690 sc-eQTL 8.45e-01 0.0161 0.0825 0.628 B L1
ENSG00000116641 DOCK7 194499 sc-eQTL 4.78e-01 -0.0585 0.0824 0.628 B L1
ENSG00000125703 ATG4C 98753 sc-eQTL 3.77e-01 0.0506 0.0572 0.628 B L1
ENSG00000142856 ITGB3BP -710836 sc-eQTL 1.40e-01 -0.134 0.0907 0.628 B L1
ENSG00000162607 USP1 446588 sc-eQTL 7.27e-01 -0.0276 0.0791 0.628 B L1
ENSG00000203965 EFCAB7 -640487 sc-eQTL 3.02e-02 -0.202 0.0924 0.628 B L1
ENSG00000079739 PGM1 -710526 sc-eQTL 5.19e-01 -0.044 0.0682 0.628 CD4T L1
ENSG00000088035 ALG6 -484690 sc-eQTL 4.51e-01 -0.0567 0.0752 0.628 CD4T L1
ENSG00000116641 DOCK7 194499 sc-eQTL 6.68e-01 0.0327 0.0762 0.628 CD4T L1
ENSG00000125703 ATG4C 98753 sc-eQTL 7.54e-01 -0.0193 0.0615 0.628 CD4T L1
ENSG00000142856 ITGB3BP -710836 sc-eQTL 8.72e-01 0.0141 0.0874 0.628 CD4T L1
ENSG00000162607 USP1 446588 sc-eQTL 5.62e-01 0.0347 0.0597 0.628 CD4T L1
ENSG00000203965 EFCAB7 -640487 sc-eQTL 2.76e-01 0.0854 0.0782 0.628 CD4T L1
ENSG00000079739 PGM1 -710526 sc-eQTL 8.92e-01 0.0103 0.0756 0.628 CD8T L1
ENSG00000088035 ALG6 -484690 sc-eQTL 6.98e-01 -0.0323 0.0833 0.628 CD8T L1
ENSG00000116641 DOCK7 194499 sc-eQTL 8.63e-01 -0.0146 0.0844 0.628 CD8T L1
ENSG00000125703 ATG4C 98753 sc-eQTL 1.26e-02 0.199 0.079 0.628 CD8T L1
ENSG00000142856 ITGB3BP -710836 sc-eQTL 7.97e-01 -0.023 0.0897 0.628 CD8T L1
ENSG00000162607 USP1 446588 sc-eQTL 8.21e-01 -0.0158 0.0698 0.628 CD8T L1
ENSG00000203965 EFCAB7 -640487 sc-eQTL 8.82e-01 0.0133 0.0894 0.628 CD8T L1
ENSG00000079739 PGM1 -710526 sc-eQTL 5.32e-01 -0.0527 0.0841 0.624 DC L1
ENSG00000088035 ALG6 -484690 sc-eQTL 8.40e-01 0.0176 0.0869 0.624 DC L1
ENSG00000116641 DOCK7 194499 sc-eQTL 7.18e-01 0.0322 0.0891 0.624 DC L1
ENSG00000125703 ATG4C 98753 sc-eQTL 8.70e-01 -0.0114 0.0697 0.624 DC L1
ENSG00000142856 ITGB3BP -710836 sc-eQTL 9.03e-01 -0.0119 0.0974 0.624 DC L1
ENSG00000162607 USP1 446588 sc-eQTL 8.38e-01 0.0174 0.0851 0.624 DC L1
ENSG00000203965 EFCAB7 -640487 sc-eQTL 6.48e-01 -0.0387 0.0848 0.624 DC L1
ENSG00000079739 PGM1 -710526 sc-eQTL 7.85e-01 0.0224 0.082 0.628 Mono L1
ENSG00000088035 ALG6 -484690 sc-eQTL 4.12e-02 -0.174 0.0848 0.628 Mono L1
ENSG00000116641 DOCK7 194499 sc-eQTL 8.06e-01 0.0204 0.0828 0.628 Mono L1
ENSG00000125703 ATG4C 98753 sc-eQTL 4.51e-01 0.0422 0.0559 0.628 Mono L1
ENSG00000142856 ITGB3BP -710836 sc-eQTL 6.00e-01 0.0464 0.0884 0.628 Mono L1
ENSG00000162607 USP1 446588 sc-eQTL 3.08e-01 -0.074 0.0724 0.628 Mono L1
ENSG00000240563 L1TD1 688036 sc-eQTL 5.57e-01 -0.0398 0.0677 0.628 Mono L1
ENSG00000079739 PGM1 -710526 sc-eQTL 3.19e-01 0.0707 0.0707 0.627 NK L1
ENSG00000088035 ALG6 -484690 sc-eQTL 7.23e-01 0.0295 0.0831 0.627 NK L1
ENSG00000116641 DOCK7 194499 sc-eQTL 2.33e-01 0.0816 0.0682 0.627 NK L1
ENSG00000125703 ATG4C 98753 sc-eQTL 8.31e-01 0.0157 0.0735 0.627 NK L1
ENSG00000142856 ITGB3BP -710836 sc-eQTL 4.05e-01 -0.0762 0.0912 0.627 NK L1
ENSG00000162607 USP1 446588 sc-eQTL 9.32e-01 0.00694 0.0817 0.627 NK L1
ENSG00000203965 EFCAB7 -640487 sc-eQTL 4.20e-01 -0.0801 0.0991 0.627 NK L1
ENSG00000079739 PGM1 -710526 sc-eQTL 8.21e-02 -0.14 0.08 0.628 Other_T L1
ENSG00000088035 ALG6 -484690 sc-eQTL 3.51e-01 0.0756 0.0808 0.628 Other_T L1
ENSG00000116641 DOCK7 194499 sc-eQTL 9.88e-01 0.00125 0.0827 0.628 Other_T L1
ENSG00000125703 ATG4C 98753 sc-eQTL 1.23e-02 0.178 0.0705 0.628 Other_T L1
ENSG00000142856 ITGB3BP -710836 sc-eQTL 1.39e-01 -0.0937 0.0631 0.628 Other_T L1
ENSG00000162607 USP1 446588 sc-eQTL 8.20e-01 -0.0125 0.055 0.628 Other_T L1
ENSG00000203965 EFCAB7 -640487 sc-eQTL 7.97e-01 0.0252 0.0979 0.628 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -710526 sc-eQTL 4.20e-01 -0.0874 0.108 0.622 B_Activated L2
ENSG00000088035 ALG6 -484690 sc-eQTL 3.24e-01 -0.102 0.103 0.622 B_Activated L2
ENSG00000116641 DOCK7 194499 sc-eQTL 9.18e-01 0.00996 0.0966 0.622 B_Activated L2
ENSG00000125703 ATG4C 98753 sc-eQTL 2.99e-01 -0.105 0.101 0.622 B_Activated L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 3.34e-02 -0.21 0.098 0.622 B_Activated L2
ENSG00000162607 USP1 446588 sc-eQTL 7.46e-01 -0.0348 0.108 0.622 B_Activated L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 9.01e-01 0.0117 0.094 0.622 B_Activated L2
ENSG00000079739 PGM1 -710526 sc-eQTL 6.28e-01 -0.0473 0.0975 0.629 B_Intermediate L2
ENSG00000088035 ALG6 -484690 sc-eQTL 9.30e-01 0.00868 0.0991 0.629 B_Intermediate L2
ENSG00000116641 DOCK7 194499 sc-eQTL 8.91e-01 0.013 0.0946 0.629 B_Intermediate L2
ENSG00000125703 ATG4C 98753 sc-eQTL 8.01e-01 -0.0202 0.0801 0.629 B_Intermediate L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 6.95e-01 0.0375 0.0954 0.629 B_Intermediate L2
ENSG00000162607 USP1 446588 sc-eQTL 4.82e-01 0.067 0.0952 0.629 B_Intermediate L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 1.79e-01 -0.127 0.0941 0.629 B_Intermediate L2
ENSG00000079739 PGM1 -710526 sc-eQTL 9.16e-01 0.00998 0.095 0.627 B_Memory L2
ENSG00000088035 ALG6 -484690 sc-eQTL 3.93e-01 -0.0826 0.0964 0.627 B_Memory L2
ENSG00000116641 DOCK7 194499 sc-eQTL 8.51e-01 -0.0171 0.0906 0.627 B_Memory L2
ENSG00000125703 ATG4C 98753 sc-eQTL 4.56e-01 -0.0643 0.086 0.627 B_Memory L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 9.11e-01 -0.0111 0.0985 0.627 B_Memory L2
ENSG00000162607 USP1 446588 sc-eQTL 2.49e-01 0.115 0.0991 0.627 B_Memory L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 2.07e-01 -0.123 0.0974 0.627 B_Memory L2
ENSG00000079739 PGM1 -710526 sc-eQTL 4.09e-01 0.0788 0.0953 0.628 B_Naive1 L2
ENSG00000088035 ALG6 -484690 sc-eQTL 3.31e-01 0.0932 0.0957 0.628 B_Naive1 L2
ENSG00000116641 DOCK7 194499 sc-eQTL 3.25e-01 -0.0905 0.0916 0.628 B_Naive1 L2
ENSG00000125703 ATG4C 98753 sc-eQTL 4.14e-02 0.144 0.0701 0.628 B_Naive1 L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 2.48e-01 -0.108 0.0936 0.628 B_Naive1 L2
ENSG00000162607 USP1 446588 sc-eQTL 1.36e-01 -0.123 0.0821 0.628 B_Naive1 L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 5.28e-02 -0.193 0.0993 0.628 B_Naive1 L2
ENSG00000079739 PGM1 -710526 sc-eQTL 4.14e-01 0.0779 0.0951 0.629 B_Naive2 L2
ENSG00000088035 ALG6 -484690 sc-eQTL 9.43e-01 0.00708 0.0993 0.629 B_Naive2 L2
ENSG00000116641 DOCK7 194499 sc-eQTL 8.58e-01 0.0171 0.0955 0.629 B_Naive2 L2
ENSG00000125703 ATG4C 98753 sc-eQTL 8.53e-01 0.0171 0.0919 0.629 B_Naive2 L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 7.30e-01 -0.0344 0.0996 0.629 B_Naive2 L2
ENSG00000162607 USP1 446588 sc-eQTL 7.82e-01 -0.0263 0.0948 0.629 B_Naive2 L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 8.31e-01 -0.0211 0.0992 0.629 B_Naive2 L2
ENSG00000079739 PGM1 -710526 sc-eQTL 6.66e-02 -0.176 0.0954 0.623 CD4_CTL L2
ENSG00000088035 ALG6 -484690 sc-eQTL 8.53e-01 0.0189 0.102 0.623 CD4_CTL L2
ENSG00000116641 DOCK7 194499 sc-eQTL 1.76e-01 0.12 0.0886 0.623 CD4_CTL L2
ENSG00000125703 ATG4C 98753 sc-eQTL 7.45e-01 0.03 0.092 0.623 CD4_CTL L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 2.54e-01 0.112 0.0981 0.623 CD4_CTL L2
ENSG00000162607 USP1 446588 sc-eQTL 8.53e-01 0.0174 0.0937 0.623 CD4_CTL L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 2.84e-01 -0.1 0.0933 0.623 CD4_CTL L2
ENSG00000079739 PGM1 -710526 sc-eQTL 8.72e-01 -0.0123 0.0765 0.628 CD4_Naive L2
ENSG00000088035 ALG6 -484690 sc-eQTL 9.84e-01 -0.00169 0.0831 0.628 CD4_Naive L2
ENSG00000116641 DOCK7 194499 sc-eQTL 7.75e-01 -0.0234 0.0816 0.628 CD4_Naive L2
ENSG00000125703 ATG4C 98753 sc-eQTL 5.84e-01 -0.0395 0.0721 0.628 CD4_Naive L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 4.87e-01 -0.0614 0.0881 0.628 CD4_Naive L2
ENSG00000162607 USP1 446588 sc-eQTL 4.00e-01 0.0568 0.0673 0.628 CD4_Naive L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 6.90e-02 0.159 0.0869 0.628 CD4_Naive L2
ENSG00000079739 PGM1 -710526 sc-eQTL 9.33e-01 0.00672 0.0801 0.628 CD4_TCM L2
ENSG00000088035 ALG6 -484690 sc-eQTL 1.05e-01 -0.15 0.0924 0.628 CD4_TCM L2
ENSG00000116641 DOCK7 194499 sc-eQTL 7.44e-01 -0.0269 0.0824 0.628 CD4_TCM L2
ENSG00000125703 ATG4C 98753 sc-eQTL 8.65e-01 -0.0136 0.0802 0.628 CD4_TCM L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 2.42e-01 0.111 0.0943 0.628 CD4_TCM L2
ENSG00000162607 USP1 446588 sc-eQTL 9.06e-01 0.00914 0.0775 0.628 CD4_TCM L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 2.74e-01 0.1 0.0913 0.628 CD4_TCM L2
ENSG00000079739 PGM1 -710526 sc-eQTL 6.93e-01 -0.0374 0.0943 0.628 CD4_TEM L2
ENSG00000088035 ALG6 -484690 sc-eQTL 2.74e-01 -0.104 0.0946 0.628 CD4_TEM L2
ENSG00000116641 DOCK7 194499 sc-eQTL 7.72e-01 -0.0268 0.0924 0.628 CD4_TEM L2
ENSG00000125703 ATG4C 98753 sc-eQTL 8.02e-01 0.0226 0.0898 0.628 CD4_TEM L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 7.92e-01 0.0244 0.0927 0.628 CD4_TEM L2
ENSG00000162607 USP1 446588 sc-eQTL 8.37e-01 0.0181 0.0878 0.628 CD4_TEM L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 6.86e-02 -0.174 0.0953 0.628 CD4_TEM L2
ENSG00000079739 PGM1 -710526 sc-eQTL 2.73e-01 0.0954 0.0867 0.628 CD8_CTL L2
ENSG00000088035 ALG6 -484690 sc-eQTL 4.13e-01 -0.0757 0.0923 0.628 CD8_CTL L2
ENSG00000116641 DOCK7 194499 sc-eQTL 4.18e-01 0.0711 0.0876 0.628 CD8_CTL L2
ENSG00000125703 ATG4C 98753 sc-eQTL 4.99e-02 0.183 0.0926 0.628 CD8_CTL L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 3.60e-01 -0.0889 0.0969 0.628 CD8_CTL L2
ENSG00000162607 USP1 446588 sc-eQTL 4.24e-01 0.0696 0.0869 0.628 CD8_CTL L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 3.68e-01 0.0896 0.0993 0.628 CD8_CTL L2
ENSG00000079739 PGM1 -710526 sc-eQTL 7.20e-01 0.0314 0.0877 0.628 CD8_Naive L2
ENSG00000088035 ALG6 -484690 sc-eQTL 3.78e-01 -0.08 0.0906 0.628 CD8_Naive L2
ENSG00000116641 DOCK7 194499 sc-eQTL 1.15e-01 -0.148 0.0933 0.628 CD8_Naive L2
ENSG00000125703 ATG4C 98753 sc-eQTL 5.06e-02 0.176 0.0893 0.628 CD8_Naive L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 8.51e-01 -0.0172 0.0913 0.628 CD8_Naive L2
ENSG00000162607 USP1 446588 sc-eQTL 7.97e-01 0.0199 0.0771 0.628 CD8_Naive L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 8.71e-01 0.014 0.086 0.628 CD8_Naive L2
ENSG00000079739 PGM1 -710526 sc-eQTL 1.05e-02 -0.245 0.0947 0.627 CD8_TCM L2
ENSG00000088035 ALG6 -484690 sc-eQTL 1.43e-01 0.143 0.097 0.627 CD8_TCM L2
ENSG00000116641 DOCK7 194499 sc-eQTL 6.54e-01 0.0427 0.0952 0.627 CD8_TCM L2
ENSG00000125703 ATG4C 98753 sc-eQTL 7.12e-01 -0.036 0.0973 0.627 CD8_TCM L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 7.53e-01 0.0298 0.0946 0.627 CD8_TCM L2
ENSG00000162607 USP1 446588 sc-eQTL 9.18e-01 -0.00944 0.0911 0.627 CD8_TCM L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 4.22e-02 0.195 0.0954 0.627 CD8_TCM L2
ENSG00000079739 PGM1 -710526 sc-eQTL 3.86e-01 0.088 0.101 0.637 CD8_TEM L2
ENSG00000088035 ALG6 -484690 sc-eQTL 1.01e-02 0.26 0.1 0.637 CD8_TEM L2
ENSG00000116641 DOCK7 194499 sc-eQTL 6.40e-01 0.0462 0.0986 0.637 CD8_TEM L2
ENSG00000125703 ATG4C 98753 sc-eQTL 7.04e-03 0.254 0.0931 0.637 CD8_TEM L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 8.07e-01 0.0251 0.103 0.637 CD8_TEM L2
ENSG00000162607 USP1 446588 sc-eQTL 3.11e-01 -0.0992 0.0977 0.637 CD8_TEM L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 7.62e-01 -0.0301 0.0995 0.637 CD8_TEM L2
ENSG00000079739 PGM1 -710526 sc-eQTL 4.99e-02 -0.18 0.0914 0.628 MAIT L2
ENSG00000088035 ALG6 -484690 sc-eQTL 6.18e-01 0.0455 0.0913 0.628 MAIT L2
ENSG00000116641 DOCK7 194499 sc-eQTL 9.48e-01 -0.00575 0.0875 0.628 MAIT L2
ENSG00000125703 ATG4C 98753 sc-eQTL 6.05e-02 0.173 0.0915 0.628 MAIT L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 3.42e-01 -0.0879 0.0922 0.628 MAIT L2
ENSG00000162607 USP1 446588 sc-eQTL 9.17e-01 0.00962 0.0917 0.628 MAIT L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 7.66e-01 0.0284 0.0951 0.628 MAIT L2
ENSG00000079739 PGM1 -710526 sc-eQTL 9.34e-01 0.00763 0.0923 0.624 NK_CD56bright L2
ENSG00000088035 ALG6 -484690 sc-eQTL 8.58e-01 -0.0169 0.0946 0.624 NK_CD56bright L2
ENSG00000116641 DOCK7 194499 sc-eQTL 6.63e-02 -0.15 0.0813 0.624 NK_CD56bright L2
ENSG00000125703 ATG4C 98753 sc-eQTL 2.50e-01 -0.105 0.0913 0.624 NK_CD56bright L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 8.94e-01 -0.0128 0.0954 0.624 NK_CD56bright L2
ENSG00000162607 USP1 446588 sc-eQTL 8.14e-01 0.0231 0.0983 0.624 NK_CD56bright L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 1.45e-01 -0.137 0.0936 0.624 NK_CD56bright L2
ENSG00000079739 PGM1 -710526 sc-eQTL 6.08e-01 -0.0377 0.0734 0.625 NK_CD56dim L2
ENSG00000088035 ALG6 -484690 sc-eQTL 8.37e-01 -0.0192 0.0932 0.625 NK_CD56dim L2
ENSG00000116641 DOCK7 194499 sc-eQTL 2.48e-01 0.0937 0.0809 0.625 NK_CD56dim L2
ENSG00000125703 ATG4C 98753 sc-eQTL 6.29e-01 -0.0399 0.0823 0.625 NK_CD56dim L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 2.59e-01 -0.106 0.0935 0.625 NK_CD56dim L2
ENSG00000162607 USP1 446588 sc-eQTL 7.27e-01 0.0317 0.0909 0.625 NK_CD56dim L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 9.41e-01 -0.00745 0.101 0.625 NK_CD56dim L2
ENSG00000079739 PGM1 -710526 sc-eQTL 9.61e-01 -0.00489 0.099 0.63 NK_HLA L2
ENSG00000088035 ALG6 -484690 sc-eQTL 1.38e-01 -0.152 0.102 0.63 NK_HLA L2
ENSG00000116641 DOCK7 194499 sc-eQTL 8.50e-01 0.0149 0.0785 0.63 NK_HLA L2
ENSG00000125703 ATG4C 98753 sc-eQTL 3.11e-02 0.196 0.0902 0.63 NK_HLA L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 7.37e-01 -0.0323 0.0959 0.63 NK_HLA L2
ENSG00000162607 USP1 446588 sc-eQTL 9.52e-01 -0.00601 0.1 0.63 NK_HLA L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 9.12e-01 0.0101 0.0913 0.63 NK_HLA L2
ENSG00000079739 PGM1 -710526 sc-eQTL 1.47e-01 0.116 0.0795 0.625 NK_cytokine L2
ENSG00000088035 ALG6 -484690 sc-eQTL 2.51e-02 0.201 0.0892 0.625 NK_cytokine L2
ENSG00000116641 DOCK7 194499 sc-eQTL 3.29e-01 0.0817 0.0835 0.625 NK_cytokine L2
ENSG00000125703 ATG4C 98753 sc-eQTL 5.52e-01 0.0509 0.0855 0.625 NK_cytokine L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 4.13e-01 -0.0726 0.0885 0.625 NK_cytokine L2
ENSG00000162607 USP1 446588 sc-eQTL 7.20e-01 -0.0334 0.0931 0.625 NK_cytokine L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 8.65e-01 0.0161 0.0944 0.625 NK_cytokine L2
ENSG00000079739 PGM1 -710526 sc-eQTL 8.85e-01 -0.016 0.111 0.637 PB L2
ENSG00000088035 ALG6 -484690 sc-eQTL 8.24e-01 0.026 0.117 0.637 PB L2
ENSG00000116641 DOCK7 194499 sc-eQTL 8.92e-01 0.017 0.125 0.637 PB L2
ENSG00000125703 ATG4C 98753 sc-eQTL 2.76e-01 0.118 0.108 0.637 PB L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 7.32e-01 -0.0372 0.108 0.637 PB L2
ENSG00000162607 USP1 446588 sc-eQTL 8.21e-01 0.0246 0.108 0.637 PB L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 9.01e-01 -0.0148 0.119 0.637 PB L2
ENSG00000079739 PGM1 -710526 sc-eQTL 6.96e-01 0.0341 0.0871 0.628 Pro_T L2
ENSG00000088035 ALG6 -484690 sc-eQTL 7.11e-01 -0.0329 0.0886 0.628 Pro_T L2
ENSG00000116641 DOCK7 194499 sc-eQTL 4.33e-01 0.0698 0.0888 0.628 Pro_T L2
ENSG00000125703 ATG4C 98753 sc-eQTL 9.08e-01 -0.00903 0.0779 0.628 Pro_T L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 3.50e-02 -0.164 0.0773 0.628 Pro_T L2
ENSG00000162607 USP1 446588 sc-eQTL 6.87e-01 0.0217 0.0537 0.628 Pro_T L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 3.23e-01 0.0898 0.0905 0.628 Pro_T L2
ENSG00000079739 PGM1 -710526 sc-eQTL 8.88e-01 0.013 0.092 0.628 Treg L2
ENSG00000088035 ALG6 -484690 sc-eQTL 7.35e-01 -0.0333 0.0983 0.628 Treg L2
ENSG00000116641 DOCK7 194499 sc-eQTL 7.19e-01 0.0325 0.0903 0.628 Treg L2
ENSG00000125703 ATG4C 98753 sc-eQTL 4.61e-01 0.0681 0.0922 0.628 Treg L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 3.94e-01 0.0823 0.0964 0.628 Treg L2
ENSG00000162607 USP1 446588 sc-eQTL 8.42e-01 -0.0186 0.0934 0.628 Treg L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 6.80e-01 -0.0381 0.0923 0.628 Treg L2
ENSG00000079739 PGM1 -710526 sc-eQTL 2.99e-01 -0.0936 0.0898 0.62 cDC L2
ENSG00000088035 ALG6 -484690 sc-eQTL 9.95e-02 -0.15 0.0907 0.62 cDC L2
ENSG00000116641 DOCK7 194499 sc-eQTL 5.22e-01 0.0574 0.0895 0.62 cDC L2
ENSG00000125703 ATG4C 98753 sc-eQTL 5.69e-01 -0.0444 0.0778 0.62 cDC L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 6.07e-01 0.0508 0.0986 0.62 cDC L2
ENSG00000162607 USP1 446588 sc-eQTL 7.67e-01 0.0261 0.0878 0.62 cDC L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 9.92e-01 0.000813 0.0793 0.62 cDC L2
ENSG00000079739 PGM1 -710526 sc-eQTL 4.66e-01 0.0622 0.0851 0.628 cMono_IL1B L2
ENSG00000088035 ALG6 -484690 sc-eQTL 3.58e-02 -0.178 0.0844 0.628 cMono_IL1B L2
ENSG00000116641 DOCK7 194499 sc-eQTL 8.05e-01 0.0222 0.09 0.628 cMono_IL1B L2
ENSG00000125703 ATG4C 98753 sc-eQTL 6.77e-01 0.0263 0.0633 0.628 cMono_IL1B L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 9.25e-01 -0.00841 0.0896 0.628 cMono_IL1B L2
ENSG00000162607 USP1 446588 sc-eQTL 3.90e-01 -0.068 0.0789 0.628 cMono_IL1B L2
ENSG00000240563 L1TD1 688036 sc-eQTL 8.06e-01 -0.0195 0.0794 0.628 cMono_IL1B L2
ENSG00000079739 PGM1 -710526 sc-eQTL 6.32e-01 0.0452 0.0942 0.628 cMono_S100A L2
ENSG00000088035 ALG6 -484690 sc-eQTL 1.39e-01 -0.141 0.095 0.628 cMono_S100A L2
ENSG00000116641 DOCK7 194499 sc-eQTL 5.42e-01 -0.0541 0.0885 0.628 cMono_S100A L2
ENSG00000125703 ATG4C 98753 sc-eQTL 7.42e-01 0.0253 0.0766 0.628 cMono_S100A L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 2.50e-01 0.0995 0.0862 0.628 cMono_S100A L2
ENSG00000162607 USP1 446588 sc-eQTL 6.65e-01 -0.0386 0.089 0.628 cMono_S100A L2
ENSG00000240563 L1TD1 688036 sc-eQTL 3.44e-01 0.07 0.0739 0.628 cMono_S100A L2
ENSG00000079739 PGM1 -710526 sc-eQTL 2.61e-01 -0.12 0.107 0.63 gdT L2
ENSG00000088035 ALG6 -484690 sc-eQTL 2.44e-01 -0.133 0.114 0.63 gdT L2
ENSG00000116641 DOCK7 194499 sc-eQTL 6.02e-01 0.0585 0.112 0.63 gdT L2
ENSG00000125703 ATG4C 98753 sc-eQTL 5.80e-01 -0.0593 0.107 0.63 gdT L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 3.87e-01 -0.0984 0.113 0.63 gdT L2
ENSG00000162607 USP1 446588 sc-eQTL 1.82e-01 -0.143 0.107 0.63 gdT L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 8.65e-01 0.0191 0.112 0.63 gdT L2
ENSG00000079739 PGM1 -710526 sc-eQTL 7.22e-01 0.0336 0.0943 0.629 intMono L2
ENSG00000088035 ALG6 -484690 sc-eQTL 3.62e-01 0.0801 0.0876 0.629 intMono L2
ENSG00000116641 DOCK7 194499 sc-eQTL 3.31e-01 0.0872 0.0895 0.629 intMono L2
ENSG00000125703 ATG4C 98753 sc-eQTL 5.83e-01 -0.0471 0.0856 0.629 intMono L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 3.90e-01 0.0812 0.0942 0.629 intMono L2
ENSG00000162607 USP1 446588 sc-eQTL 5.16e-01 -0.0624 0.0958 0.629 intMono L2
ENSG00000240563 L1TD1 688036 sc-eQTL 4.08e-01 -0.0584 0.0704 0.629 intMono L2
ENSG00000079739 PGM1 -710526 sc-eQTL 2.70e-01 -0.0957 0.0866 0.629 ncMono L2
ENSG00000088035 ALG6 -484690 sc-eQTL 5.30e-01 0.0599 0.0953 0.629 ncMono L2
ENSG00000116641 DOCK7 194499 sc-eQTL 5.35e-01 -0.0582 0.0938 0.629 ncMono L2
ENSG00000125703 ATG4C 98753 sc-eQTL 3.46e-01 0.0827 0.0875 0.629 ncMono L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 6.25e-01 0.0449 0.0917 0.629 ncMono L2
ENSG00000162607 USP1 446588 sc-eQTL 9.29e-01 -0.00841 0.0938 0.629 ncMono L2
ENSG00000240563 L1TD1 688036 sc-eQTL 4.50e-01 -0.0502 0.0664 0.629 ncMono L2
ENSG00000079739 PGM1 -710526 sc-eQTL 7.05e-01 -0.0394 0.104 0.627 pDC L2
ENSG00000088035 ALG6 -484690 sc-eQTL 3.29e-02 0.215 0.1 0.627 pDC L2
ENSG00000116641 DOCK7 194499 sc-eQTL 7.41e-01 -0.0343 0.104 0.627 pDC L2
ENSG00000125703 ATG4C 98753 sc-eQTL 4.00e-01 0.0784 0.0928 0.627 pDC L2
ENSG00000142856 ITGB3BP -710836 sc-eQTL 2.20e-01 -0.128 0.104 0.627 pDC L2
ENSG00000162607 USP1 446588 sc-eQTL 5.13e-01 0.0696 0.106 0.627 pDC L2
ENSG00000203965 EFCAB7 -640487 sc-eQTL 6.72e-01 -0.0392 0.0924 0.627 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -710526 sc-eQTL 5.58e-01 -0.0528 0.09 0.628 B_Memory LOneK1K
ENSG00000088035 ALG6 -484690 sc-eQTL 4.37e-01 -0.0774 0.0994 0.628 B_Memory LOneK1K
ENSG00000116641 DOCK7 194499 sc-eQTL 5.68e-01 0.0494 0.0863 0.628 B_Memory LOneK1K
ENSG00000125703 ATG4C 98753 sc-eQTL 3.71e-01 -0.0625 0.0697 0.628 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -710836 sc-eQTL 4.91e-01 -0.0633 0.0917 0.628 B_Memory LOneK1K
ENSG00000162607 USP1 446588 sc-eQTL 3.74e-01 0.0792 0.0889 0.628 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -640487 sc-eQTL 7.75e-02 -0.168 0.0949 0.628 B_Memory LOneK1K
ENSG00000079739 PGM1 -710526 sc-eQTL 3.33e-01 0.0899 0.0926 0.628 B_Naive LOneK1K
ENSG00000088035 ALG6 -484690 sc-eQTL 3.54e-01 0.0886 0.0954 0.628 B_Naive LOneK1K
ENSG00000116641 DOCK7 194499 sc-eQTL 5.31e-01 -0.0559 0.0892 0.628 B_Naive LOneK1K
ENSG00000125703 ATG4C 98753 sc-eQTL 2.22e-02 0.155 0.0673 0.628 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -710836 sc-eQTL 2.11e-01 -0.12 0.096 0.628 B_Naive LOneK1K
ENSG00000162607 USP1 446588 sc-eQTL 2.06e-01 -0.105 0.0824 0.628 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -640487 sc-eQTL 1.05e-01 -0.156 0.0962 0.628 B_Naive LOneK1K
ENSG00000079739 PGM1 -710526 sc-eQTL 6.02e-01 0.0452 0.0866 0.628 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -484690 sc-eQTL 1.99e-02 -0.194 0.0829 0.628 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 194499 sc-eQTL 9.37e-01 -0.00672 0.0845 0.628 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 98753 sc-eQTL 4.94e-01 0.04 0.0584 0.628 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -710836 sc-eQTL 5.16e-01 0.0562 0.0864 0.628 CD14_Mono LOneK1K
ENSG00000162607 USP1 446588 sc-eQTL 2.70e-01 -0.0815 0.0736 0.628 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 688036 sc-eQTL 7.40e-01 0.0266 0.08 0.628 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -710526 sc-eQTL 8.16e-01 -0.0194 0.0833 0.627 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -484690 sc-eQTL 2.29e-01 0.114 0.0943 0.627 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 194499 sc-eQTL 8.05e-01 0.0232 0.0936 0.627 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 98753 sc-eQTL 7.41e-01 0.0264 0.0798 0.627 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -710836 sc-eQTL 4.02e-01 0.0776 0.0925 0.627 CD16_Mono LOneK1K
ENSG00000162607 USP1 446588 sc-eQTL 3.52e-01 -0.0811 0.0869 0.627 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 688036 sc-eQTL 1.83e-01 -0.079 0.0591 0.627 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -710526 sc-eQTL 4.45e-01 0.0551 0.072 0.625 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -484690 sc-eQTL 5.96e-01 0.046 0.0865 0.625 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 194499 sc-eQTL 9.91e-02 0.128 0.0771 0.625 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 98753 sc-eQTL 9.24e-01 0.0074 0.0774 0.625 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -710836 sc-eQTL 3.51e-01 -0.0856 0.0916 0.625 NK_CD56dim LOneK1K
ENSG00000162607 USP1 446588 sc-eQTL 6.85e-01 -0.0338 0.0833 0.625 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -640487 sc-eQTL 8.75e-01 -0.016 0.101 0.625 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 194517 eQTL 1.97e-05 0.0959 0.0224 0.0 0.0 0.344
ENSG00000125703 ATG4C 98753 eQTL 1.87e-05 0.073 0.017 0.00459 0.00503 0.344
ENSG00000142856 ITGB3BP -710836 eQTL 0.00238 -0.0906 0.0298 0.0 0.0 0.344
ENSG00000162607 USP1 446588 eQTL 0.00354 0.0382 0.0131 0.0 0.0 0.344

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 DOCK7 194517 3.47e-06 3.17e-06 5.82e-07 1.97e-06 8.02e-07 8.41e-07 2.46e-06 9.02e-07 2.35e-06 1.41e-06 3.02e-06 1.98e-06 4.32e-06 1.43e-06 9.35e-07 2e-06 1.54e-06 2.16e-06 1.56e-06 1.22e-06 1.39e-06 3.37e-06 2.69e-06 1.64e-06 4.03e-06 1.25e-06 1.56e-06 1.78e-06 2.82e-06 2.28e-06 2.06e-06 4.9e-07 5.88e-07 1.45e-06 1.6e-06 9.5e-07 9.23e-07 4.49e-07 1.3e-06 3.46e-07 4.03e-07 4.08e-06 5.88e-07 1.89e-07 3.64e-07 3.87e-07 8.3e-07 2.07e-07 1.79e-07
ENSG00000125703 ATG4C 98753 6.7e-06 8.3e-06 1.35e-06 3.91e-06 2.1e-06 3.19e-06 9.53e-06 1.69e-06 6.18e-06 4.43e-06 9.08e-06 4.64e-06 1.13e-05 3.58e-06 1.83e-06 5.67e-06 3.69e-06 4.31e-06 2.5e-06 2.66e-06 3.97e-06 7.64e-06 5.93e-06 2.87e-06 1.03e-05 2.84e-06 4.34e-06 2.84e-06 7e-06 7.61e-06 4.11e-06 8.65e-07 1.1e-06 2.83e-06 2.96e-06 2.1e-06 1.71e-06 1.81e-06 1.62e-06 1.02e-06 9.75e-07 8.29e-06 1.02e-06 1.44e-07 7.16e-07 1.28e-06 1.06e-06 6.92e-07 4.89e-07
ENSG00000142856 ITGB3BP -710836 3.71e-07 1.76e-07 7.45e-08 2.27e-07 1.05e-07 1.03e-07 2.86e-07 6.75e-08 1.94e-07 1.11e-07 2.04e-07 1.82e-07 2.94e-07 8.55e-08 6.93e-08 1.1e-07 6.81e-08 2.21e-07 7.76e-08 7.05e-08 1.33e-07 2.06e-07 1.81e-07 3.83e-08 2.36e-07 1.71e-07 1.33e-07 1.28e-07 1.4e-07 1.58e-07 1.27e-07 5.08e-08 4.74e-08 1.02e-07 5.24e-08 4.6e-08 6.24e-08 6.98e-08 5.27e-08 7.17e-08 4.51e-08 1.63e-07 3.46e-08 1.1e-08 3.66e-08 6.39e-09 9.26e-08 0.0 4.47e-08