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Genes within 1Mb (chr1:62867539:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -725872 sc-eQTL 1.40e-01 0.116 0.0786 0.712 B L1
ENSG00000088035 ALG6 -500036 sc-eQTL 6.51e-01 0.0371 0.0818 0.712 B L1
ENSG00000116641 DOCK7 179153 sc-eQTL 5.92e-01 0.0439 0.0818 0.712 B L1
ENSG00000125703 ATG4C 83407 sc-eQTL 2.42e-01 0.0665 0.0567 0.712 B L1
ENSG00000142856 ITGB3BP -726182 sc-eQTL 1.86e-01 -0.119 0.0901 0.712 B L1
ENSG00000162607 USP1 431242 sc-eQTL 9.47e-01 -0.00524 0.0786 0.712 B L1
ENSG00000203965 EFCAB7 -655833 sc-eQTL 3.60e-02 -0.194 0.0918 0.712 B L1
ENSG00000079739 PGM1 -725872 sc-eQTL 6.48e-01 0.0314 0.0687 0.712 CD4T L1
ENSG00000088035 ALG6 -500036 sc-eQTL 5.47e-01 -0.0457 0.0758 0.712 CD4T L1
ENSG00000116641 DOCK7 179153 sc-eQTL 4.25e-02 0.155 0.076 0.712 CD4T L1
ENSG00000125703 ATG4C 83407 sc-eQTL 8.47e-01 0.012 0.062 0.712 CD4T L1
ENSG00000142856 ITGB3BP -726182 sc-eQTL 3.62e-01 0.0803 0.0878 0.712 CD4T L1
ENSG00000162607 USP1 431242 sc-eQTL 8.95e-01 0.00791 0.0601 0.712 CD4T L1
ENSG00000203965 EFCAB7 -655833 sc-eQTL 6.32e-02 0.146 0.0784 0.712 CD4T L1
ENSG00000079739 PGM1 -725872 sc-eQTL 1.69e-01 0.104 0.0754 0.712 CD8T L1
ENSG00000088035 ALG6 -500036 sc-eQTL 5.28e-01 -0.0528 0.0834 0.712 CD8T L1
ENSG00000116641 DOCK7 179153 sc-eQTL 8.64e-01 -0.0145 0.0846 0.712 CD8T L1
ENSG00000125703 ATG4C 83407 sc-eQTL 2.20e-01 0.0985 0.0801 0.712 CD8T L1
ENSG00000142856 ITGB3BP -726182 sc-eQTL 4.74e-01 0.0644 0.0898 0.712 CD8T L1
ENSG00000162607 USP1 431242 sc-eQTL 7.39e-02 -0.125 0.0695 0.712 CD8T L1
ENSG00000203965 EFCAB7 -655833 sc-eQTL 7.71e-01 -0.0261 0.0896 0.712 CD8T L1
ENSG00000079739 PGM1 -725872 sc-eQTL 6.07e-01 -0.0432 0.084 0.714 DC L1
ENSG00000088035 ALG6 -500036 sc-eQTL 8.85e-01 0.0126 0.0867 0.714 DC L1
ENSG00000116641 DOCK7 179153 sc-eQTL 7.93e-01 0.0234 0.0889 0.714 DC L1
ENSG00000125703 ATG4C 83407 sc-eQTL 8.13e-01 0.0164 0.0695 0.714 DC L1
ENSG00000142856 ITGB3BP -726182 sc-eQTL 5.80e-01 -0.0539 0.0971 0.714 DC L1
ENSG00000162607 USP1 431242 sc-eQTL 7.87e-01 0.023 0.0849 0.714 DC L1
ENSG00000203965 EFCAB7 -655833 sc-eQTL 7.67e-01 -0.0251 0.0846 0.714 DC L1
ENSG00000079739 PGM1 -725872 sc-eQTL 7.12e-02 0.148 0.0818 0.712 Mono L1
ENSG00000088035 ALG6 -500036 sc-eQTL 6.28e-01 -0.0417 0.086 0.712 Mono L1
ENSG00000116641 DOCK7 179153 sc-eQTL 7.20e-01 0.0298 0.0832 0.712 Mono L1
ENSG00000125703 ATG4C 83407 sc-eQTL 3.14e-01 0.0566 0.0561 0.712 Mono L1
ENSG00000142856 ITGB3BP -726182 sc-eQTL 2.45e-01 0.103 0.0886 0.712 Mono L1
ENSG00000162607 USP1 431242 sc-eQTL 2.33e-01 -0.087 0.0727 0.712 Mono L1
ENSG00000240563 L1TD1 672690 sc-eQTL 8.76e-01 -0.0107 0.0681 0.712 Mono L1
ENSG00000079739 PGM1 -725872 sc-eQTL 6.28e-01 0.0341 0.0703 0.712 NK L1
ENSG00000088035 ALG6 -500036 sc-eQTL 2.93e-01 -0.0867 0.0822 0.712 NK L1
ENSG00000116641 DOCK7 179153 sc-eQTL 1.08e-02 0.172 0.0669 0.712 NK L1
ENSG00000125703 ATG4C 83407 sc-eQTL 3.81e-01 -0.0639 0.0728 0.712 NK L1
ENSG00000142856 ITGB3BP -726182 sc-eQTL 4.11e-01 0.0746 0.0905 0.712 NK L1
ENSG00000162607 USP1 431242 sc-eQTL 6.51e-01 -0.0366 0.081 0.712 NK L1
ENSG00000203965 EFCAB7 -655833 sc-eQTL 8.22e-01 -0.0222 0.0984 0.712 NK L1
ENSG00000079739 PGM1 -725872 sc-eQTL 8.54e-01 -0.0148 0.08 0.712 Other_T L1
ENSG00000088035 ALG6 -500036 sc-eQTL 8.20e-01 0.0184 0.0804 0.712 Other_T L1
ENSG00000116641 DOCK7 179153 sc-eQTL 8.35e-01 0.0171 0.0821 0.712 Other_T L1
ENSG00000125703 ATG4C 83407 sc-eQTL 3.88e-03 0.204 0.0697 0.712 Other_T L1
ENSG00000142856 ITGB3BP -726182 sc-eQTL 6.30e-01 -0.0304 0.063 0.712 Other_T L1
ENSG00000162607 USP1 431242 sc-eQTL 2.03e-01 -0.0696 0.0544 0.712 Other_T L1
ENSG00000203965 EFCAB7 -655833 sc-eQTL 3.97e-01 0.0823 0.0971 0.712 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -725872 sc-eQTL 7.66e-01 0.0321 0.108 0.707 B_Activated L2
ENSG00000088035 ALG6 -500036 sc-eQTL 4.39e-01 -0.08 0.103 0.707 B_Activated L2
ENSG00000116641 DOCK7 179153 sc-eQTL 7.04e-01 0.0366 0.0963 0.707 B_Activated L2
ENSG00000125703 ATG4C 83407 sc-eQTL 4.13e-01 -0.0829 0.101 0.707 B_Activated L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 1.16e-02 -0.248 0.0971 0.707 B_Activated L2
ENSG00000162607 USP1 431242 sc-eQTL 8.21e-01 -0.0243 0.107 0.707 B_Activated L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 5.68e-01 0.0535 0.0936 0.707 B_Activated L2
ENSG00000079739 PGM1 -725872 sc-eQTL 8.52e-01 -0.018 0.0969 0.712 B_Intermediate L2
ENSG00000088035 ALG6 -500036 sc-eQTL 6.70e-01 0.042 0.0984 0.712 B_Intermediate L2
ENSG00000116641 DOCK7 179153 sc-eQTL 1.23e-01 0.145 0.0935 0.712 B_Intermediate L2
ENSG00000125703 ATG4C 83407 sc-eQTL 5.89e-01 -0.043 0.0795 0.712 B_Intermediate L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 8.14e-01 0.0223 0.0948 0.712 B_Intermediate L2
ENSG00000162607 USP1 431242 sc-eQTL 7.66e-01 0.0282 0.0946 0.712 B_Intermediate L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 2.24e-02 -0.213 0.0928 0.712 B_Intermediate L2
ENSG00000079739 PGM1 -725872 sc-eQTL 5.25e-01 -0.0607 0.0954 0.711 B_Memory L2
ENSG00000088035 ALG6 -500036 sc-eQTL 9.39e-01 -0.00743 0.0971 0.711 B_Memory L2
ENSG00000116641 DOCK7 179153 sc-eQTL 5.44e-01 0.0553 0.091 0.711 B_Memory L2
ENSG00000125703 ATG4C 83407 sc-eQTL 5.15e-01 -0.0563 0.0864 0.711 B_Memory L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 5.20e-01 -0.0637 0.0989 0.711 B_Memory L2
ENSG00000162607 USP1 431242 sc-eQTL 8.64e-01 -0.0172 0.0999 0.711 B_Memory L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 8.82e-01 0.0147 0.0983 0.711 B_Memory L2
ENSG00000079739 PGM1 -725872 sc-eQTL 4.87e-02 0.185 0.0935 0.712 B_Naive1 L2
ENSG00000088035 ALG6 -500036 sc-eQTL 7.30e-02 0.169 0.094 0.712 B_Naive1 L2
ENSG00000116641 DOCK7 179153 sc-eQTL 5.18e-01 -0.0586 0.0906 0.712 B_Naive1 L2
ENSG00000125703 ATG4C 83407 sc-eQTL 1.12e-01 0.111 0.0695 0.712 B_Naive1 L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 1.43e-01 -0.136 0.0922 0.712 B_Naive1 L2
ENSG00000162607 USP1 431242 sc-eQTL 3.97e-01 -0.069 0.0814 0.712 B_Naive1 L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 2.30e-02 -0.224 0.0977 0.712 B_Naive1 L2
ENSG00000079739 PGM1 -725872 sc-eQTL 7.32e-02 0.167 0.093 0.712 B_Naive2 L2
ENSG00000088035 ALG6 -500036 sc-eQTL 2.39e-01 -0.115 0.0974 0.712 B_Naive2 L2
ENSG00000116641 DOCK7 179153 sc-eQTL 9.24e-01 -0.00898 0.0939 0.712 B_Naive2 L2
ENSG00000125703 ATG4C 83407 sc-eQTL 1.60e-01 0.127 0.09 0.712 B_Naive2 L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 7.26e-01 -0.0343 0.098 0.712 B_Naive2 L2
ENSG00000162607 USP1 431242 sc-eQTL 6.72e-01 0.0396 0.0933 0.712 B_Naive2 L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 9.39e-01 -0.00751 0.0976 0.712 B_Naive2 L2
ENSG00000079739 PGM1 -725872 sc-eQTL 1.01e-01 -0.154 0.0931 0.709 CD4_CTL L2
ENSG00000088035 ALG6 -500036 sc-eQTL 3.59e-01 0.0909 0.0989 0.709 CD4_CTL L2
ENSG00000116641 DOCK7 179153 sc-eQTL 8.88e-02 0.147 0.086 0.709 CD4_CTL L2
ENSG00000125703 ATG4C 83407 sc-eQTL 8.05e-01 -0.0222 0.0897 0.709 CD4_CTL L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 7.74e-02 0.169 0.0951 0.709 CD4_CTL L2
ENSG00000162607 USP1 431242 sc-eQTL 8.86e-01 -0.013 0.0913 0.709 CD4_CTL L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 8.99e-01 -0.0116 0.0911 0.709 CD4_CTL L2
ENSG00000079739 PGM1 -725872 sc-eQTL 3.84e-01 0.067 0.0768 0.712 CD4_Naive L2
ENSG00000088035 ALG6 -500036 sc-eQTL 4.67e-01 -0.0609 0.0835 0.712 CD4_Naive L2
ENSG00000116641 DOCK7 179153 sc-eQTL 3.59e-01 0.0754 0.082 0.712 CD4_Naive L2
ENSG00000125703 ATG4C 83407 sc-eQTL 9.62e-01 -0.00349 0.0726 0.712 CD4_Naive L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 7.05e-01 -0.0336 0.0887 0.712 CD4_Naive L2
ENSG00000162607 USP1 431242 sc-eQTL 5.10e-01 0.0447 0.0677 0.712 CD4_Naive L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 1.89e-02 0.206 0.087 0.712 CD4_Naive L2
ENSG00000079739 PGM1 -725872 sc-eQTL 9.21e-01 0.00796 0.0804 0.712 CD4_TCM L2
ENSG00000088035 ALG6 -500036 sc-eQTL 4.52e-01 -0.0703 0.0932 0.712 CD4_TCM L2
ENSG00000116641 DOCK7 179153 sc-eQTL 2.63e-01 0.0926 0.0825 0.712 CD4_TCM L2
ENSG00000125703 ATG4C 83407 sc-eQTL 7.35e-01 0.0273 0.0805 0.712 CD4_TCM L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 4.09e-02 0.193 0.094 0.712 CD4_TCM L2
ENSG00000162607 USP1 431242 sc-eQTL 6.17e-01 -0.039 0.0778 0.712 CD4_TCM L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 7.36e-01 0.031 0.0918 0.712 CD4_TCM L2
ENSG00000079739 PGM1 -725872 sc-eQTL 2.57e-01 0.107 0.0938 0.712 CD4_TEM L2
ENSG00000088035 ALG6 -500036 sc-eQTL 9.41e-01 -0.00706 0.0946 0.712 CD4_TEM L2
ENSG00000116641 DOCK7 179153 sc-eQTL 3.56e-01 0.0852 0.092 0.712 CD4_TEM L2
ENSG00000125703 ATG4C 83407 sc-eQTL 8.03e-01 0.0224 0.0895 0.712 CD4_TEM L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 4.90e-01 0.0639 0.0923 0.712 CD4_TEM L2
ENSG00000162607 USP1 431242 sc-eQTL 6.89e-01 0.0351 0.0875 0.712 CD4_TEM L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 3.56e-01 -0.0885 0.0956 0.712 CD4_TEM L2
ENSG00000079739 PGM1 -725872 sc-eQTL 2.67e-02 0.192 0.0861 0.712 CD8_CTL L2
ENSG00000088035 ALG6 -500036 sc-eQTL 4.42e-01 -0.0712 0.0925 0.712 CD8_CTL L2
ENSG00000116641 DOCK7 179153 sc-eQTL 1.69e-01 0.121 0.0875 0.712 CD8_CTL L2
ENSG00000125703 ATG4C 83407 sc-eQTL 1.65e-01 0.13 0.0931 0.712 CD8_CTL L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 6.55e-01 0.0435 0.0972 0.712 CD8_CTL L2
ENSG00000162607 USP1 431242 sc-eQTL 9.92e-01 -0.000827 0.0871 0.712 CD8_CTL L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 2.90e-01 0.105 0.0994 0.712 CD8_CTL L2
ENSG00000079739 PGM1 -725872 sc-eQTL 8.52e-01 0.0163 0.0872 0.712 CD8_Naive L2
ENSG00000088035 ALG6 -500036 sc-eQTL 4.02e-01 -0.0756 0.0901 0.712 CD8_Naive L2
ENSG00000116641 DOCK7 179153 sc-eQTL 1.77e-01 -0.126 0.0929 0.712 CD8_Naive L2
ENSG00000125703 ATG4C 83407 sc-eQTL 5.60e-01 0.0522 0.0895 0.712 CD8_Naive L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 8.92e-01 0.0123 0.0907 0.712 CD8_Naive L2
ENSG00000162607 USP1 431242 sc-eQTL 3.74e-01 -0.0683 0.0766 0.712 CD8_Naive L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 6.86e-01 0.0346 0.0855 0.712 CD8_Naive L2
ENSG00000079739 PGM1 -725872 sc-eQTL 4.04e-02 -0.198 0.0961 0.711 CD8_TCM L2
ENSG00000088035 ALG6 -500036 sc-eQTL 1.20e-01 0.152 0.0977 0.711 CD8_TCM L2
ENSG00000116641 DOCK7 179153 sc-eQTL 4.87e-01 0.0668 0.0959 0.711 CD8_TCM L2
ENSG00000125703 ATG4C 83407 sc-eQTL 6.45e-01 -0.0452 0.0981 0.711 CD8_TCM L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 6.71e-02 0.174 0.0946 0.711 CD8_TCM L2
ENSG00000162607 USP1 431242 sc-eQTL 1.23e-01 -0.142 0.0912 0.711 CD8_TCM L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 2.38e-01 0.115 0.0969 0.711 CD8_TCM L2
ENSG00000079739 PGM1 -725872 sc-eQTL 8.83e-01 0.0147 0.0995 0.717 CD8_TEM L2
ENSG00000088035 ALG6 -500036 sc-eQTL 8.90e-02 0.169 0.0992 0.717 CD8_TEM L2
ENSG00000116641 DOCK7 179153 sc-eQTL 2.67e-01 -0.107 0.0966 0.717 CD8_TEM L2
ENSG00000125703 ATG4C 83407 sc-eQTL 1.83e-01 0.124 0.0927 0.717 CD8_TEM L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 9.94e-01 -0.000782 0.101 0.717 CD8_TEM L2
ENSG00000162607 USP1 431242 sc-eQTL 1.32e-01 -0.145 0.0956 0.717 CD8_TEM L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 7.95e-01 0.0254 0.0977 0.717 CD8_TEM L2
ENSG00000079739 PGM1 -725872 sc-eQTL 7.92e-01 -0.0245 0.0926 0.712 MAIT L2
ENSG00000088035 ALG6 -500036 sc-eQTL 4.25e-01 -0.0731 0.0916 0.712 MAIT L2
ENSG00000116641 DOCK7 179153 sc-eQTL 4.99e-01 -0.0594 0.0878 0.712 MAIT L2
ENSG00000125703 ATG4C 83407 sc-eQTL 1.34e-02 0.228 0.0913 0.712 MAIT L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 9.03e-01 -0.0113 0.0928 0.712 MAIT L2
ENSG00000162607 USP1 431242 sc-eQTL 4.97e-01 0.0625 0.092 0.712 MAIT L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 4.82e-01 0.0673 0.0954 0.712 MAIT L2
ENSG00000079739 PGM1 -725872 sc-eQTL 7.78e-01 -0.0262 0.0928 0.707 NK_CD56bright L2
ENSG00000088035 ALG6 -500036 sc-eQTL 8.92e-01 -0.0129 0.0951 0.707 NK_CD56bright L2
ENSG00000116641 DOCK7 179153 sc-eQTL 6.37e-01 -0.0389 0.0824 0.707 NK_CD56bright L2
ENSG00000125703 ATG4C 83407 sc-eQTL 1.11e-01 -0.147 0.0915 0.707 NK_CD56bright L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 8.75e-01 0.0151 0.0959 0.707 NK_CD56bright L2
ENSG00000162607 USP1 431242 sc-eQTL 4.51e-01 0.0746 0.0988 0.707 NK_CD56bright L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 1.07e-01 -0.152 0.094 0.707 NK_CD56bright L2
ENSG00000079739 PGM1 -725872 sc-eQTL 9.65e-01 -0.00321 0.0736 0.711 NK_CD56dim L2
ENSG00000088035 ALG6 -500036 sc-eQTL 6.56e-01 -0.0416 0.0933 0.711 NK_CD56dim L2
ENSG00000116641 DOCK7 179153 sc-eQTL 1.55e-01 0.115 0.0808 0.711 NK_CD56dim L2
ENSG00000125703 ATG4C 83407 sc-eQTL 5.57e-01 -0.0484 0.0824 0.711 NK_CD56dim L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 4.93e-01 0.0643 0.0938 0.711 NK_CD56dim L2
ENSG00000162607 USP1 431242 sc-eQTL 8.66e-01 -0.0154 0.091 0.711 NK_CD56dim L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 6.67e-01 0.0436 0.101 0.711 NK_CD56dim L2
ENSG00000079739 PGM1 -725872 sc-eQTL 9.58e-01 0.00524 0.0993 0.715 NK_HLA L2
ENSG00000088035 ALG6 -500036 sc-eQTL 2.96e-02 -0.223 0.102 0.715 NK_HLA L2
ENSG00000116641 DOCK7 179153 sc-eQTL 4.00e-01 0.0662 0.0786 0.715 NK_HLA L2
ENSG00000125703 ATG4C 83407 sc-eQTL 2.28e-01 0.11 0.0912 0.715 NK_HLA L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 1.70e-01 0.132 0.0957 0.715 NK_HLA L2
ENSG00000162607 USP1 431242 sc-eQTL 8.62e-01 0.0176 0.101 0.715 NK_HLA L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 5.58e-01 0.0537 0.0915 0.715 NK_HLA L2
ENSG00000079739 PGM1 -725872 sc-eQTL 4.06e-01 0.0669 0.0803 0.711 NK_cytokine L2
ENSG00000088035 ALG6 -500036 sc-eQTL 7.67e-01 0.0269 0.0908 0.711 NK_cytokine L2
ENSG00000116641 DOCK7 179153 sc-eQTL 2.48e-02 0.188 0.0832 0.711 NK_cytokine L2
ENSG00000125703 ATG4C 83407 sc-eQTL 7.30e-01 -0.0298 0.0861 0.711 NK_cytokine L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 7.02e-01 0.0342 0.0892 0.711 NK_cytokine L2
ENSG00000162607 USP1 431242 sc-eQTL 9.99e-01 -0.000135 0.0938 0.711 NK_cytokine L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 9.31e-01 -0.0082 0.095 0.711 NK_cytokine L2
ENSG00000079739 PGM1 -725872 sc-eQTL 9.26e-01 0.00941 0.102 0.685 PB L2
ENSG00000088035 ALG6 -500036 sc-eQTL 7.38e-01 -0.0358 0.107 0.685 PB L2
ENSG00000116641 DOCK7 179153 sc-eQTL 5.80e-01 -0.0633 0.114 0.685 PB L2
ENSG00000125703 ATG4C 83407 sc-eQTL 6.04e-01 0.0517 0.0994 0.685 PB L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 5.73e-01 0.0561 0.0992 0.685 PB L2
ENSG00000162607 USP1 431242 sc-eQTL 6.28e-01 -0.048 0.0988 0.685 PB L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 4.35e-01 0.0851 0.109 0.685 PB L2
ENSG00000079739 PGM1 -725872 sc-eQTL 9.14e-01 -0.00933 0.0864 0.713 Pro_T L2
ENSG00000088035 ALG6 -500036 sc-eQTL 3.81e-01 0.0769 0.0877 0.713 Pro_T L2
ENSG00000116641 DOCK7 179153 sc-eQTL 7.53e-01 0.0278 0.0881 0.713 Pro_T L2
ENSG00000125703 ATG4C 83407 sc-eQTL 9.07e-01 -0.00905 0.0772 0.713 Pro_T L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 8.44e-02 -0.133 0.0769 0.713 Pro_T L2
ENSG00000162607 USP1 431242 sc-eQTL 7.04e-01 0.0202 0.0532 0.713 Pro_T L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 1.21e-01 0.139 0.0894 0.713 Pro_T L2
ENSG00000079739 PGM1 -725872 sc-eQTL 4.73e-01 0.0662 0.092 0.712 Treg L2
ENSG00000088035 ALG6 -500036 sc-eQTL 6.63e-01 0.043 0.0985 0.712 Treg L2
ENSG00000116641 DOCK7 179153 sc-eQTL 1.05e-01 0.146 0.0899 0.712 Treg L2
ENSG00000125703 ATG4C 83407 sc-eQTL 3.77e-01 0.0817 0.0923 0.712 Treg L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 7.20e-01 0.0346 0.0967 0.712 Treg L2
ENSG00000162607 USP1 431242 sc-eQTL 4.22e-01 -0.0751 0.0934 0.712 Treg L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 6.08e-01 0.0475 0.0925 0.712 Treg L2
ENSG00000079739 PGM1 -725872 sc-eQTL 5.28e-01 -0.0572 0.0905 0.712 cDC L2
ENSG00000088035 ALG6 -500036 sc-eQTL 1.73e-01 -0.125 0.0914 0.712 cDC L2
ENSG00000116641 DOCK7 179153 sc-eQTL 5.30e-01 0.0567 0.09 0.712 cDC L2
ENSG00000125703 ATG4C 83407 sc-eQTL 5.47e-01 -0.0471 0.0782 0.712 cDC L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 9.30e-01 0.00868 0.0992 0.712 cDC L2
ENSG00000162607 USP1 431242 sc-eQTL 2.02e-01 0.113 0.0879 0.712 cDC L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 9.82e-01 0.00185 0.0797 0.712 cDC L2
ENSG00000079739 PGM1 -725872 sc-eQTL 4.27e-02 0.172 0.0846 0.712 cMono_IL1B L2
ENSG00000088035 ALG6 -500036 sc-eQTL 3.29e-01 -0.0834 0.0853 0.712 cMono_IL1B L2
ENSG00000116641 DOCK7 179153 sc-eQTL 9.20e-01 0.00901 0.0901 0.712 cMono_IL1B L2
ENSG00000125703 ATG4C 83407 sc-eQTL 3.24e-01 0.0625 0.0632 0.712 cMono_IL1B L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 5.01e-01 0.0605 0.0897 0.712 cMono_IL1B L2
ENSG00000162607 USP1 431242 sc-eQTL 2.46e-01 -0.0919 0.0789 0.712 cMono_IL1B L2
ENSG00000240563 L1TD1 672690 sc-eQTL 8.62e-01 0.0138 0.0795 0.712 cMono_IL1B L2
ENSG00000079739 PGM1 -725872 sc-eQTL 6.84e-02 0.172 0.094 0.712 cMono_S100A L2
ENSG00000088035 ALG6 -500036 sc-eQTL 7.87e-01 0.026 0.096 0.712 cMono_S100A L2
ENSG00000116641 DOCK7 179153 sc-eQTL 6.43e-01 0.0413 0.089 0.712 cMono_S100A L2
ENSG00000125703 ATG4C 83407 sc-eQTL 5.51e-01 0.046 0.077 0.712 cMono_S100A L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 3.68e-01 0.0783 0.0868 0.712 cMono_S100A L2
ENSG00000162607 USP1 431242 sc-eQTL 6.35e-01 0.0425 0.0895 0.712 cMono_S100A L2
ENSG00000240563 L1TD1 672690 sc-eQTL 6.56e-01 0.0332 0.0744 0.712 cMono_S100A L2
ENSG00000079739 PGM1 -725872 sc-eQTL 9.08e-01 0.0127 0.11 0.724 gdT L2
ENSG00000088035 ALG6 -500036 sc-eQTL 5.85e-01 -0.0642 0.117 0.724 gdT L2
ENSG00000116641 DOCK7 179153 sc-eQTL 7.81e-02 0.202 0.114 0.724 gdT L2
ENSG00000125703 ATG4C 83407 sc-eQTL 8.40e-01 0.0223 0.11 0.724 gdT L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 5.42e-01 -0.0715 0.117 0.724 gdT L2
ENSG00000162607 USP1 431242 sc-eQTL 8.64e-02 -0.189 0.11 0.724 gdT L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 1.71e-01 0.157 0.114 0.724 gdT L2
ENSG00000079739 PGM1 -725872 sc-eQTL 3.32e-01 0.0926 0.0952 0.713 intMono L2
ENSG00000088035 ALG6 -500036 sc-eQTL 8.76e-01 0.0139 0.0889 0.713 intMono L2
ENSG00000116641 DOCK7 179153 sc-eQTL 9.71e-01 -0.00327 0.0908 0.713 intMono L2
ENSG00000125703 ATG4C 83407 sc-eQTL 1.28e-01 -0.132 0.0862 0.713 intMono L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 1.94e-01 0.124 0.0951 0.713 intMono L2
ENSG00000162607 USP1 431242 sc-eQTL 9.99e-01 0.000105 0.0971 0.713 intMono L2
ENSG00000240563 L1TD1 672690 sc-eQTL 3.88e-01 -0.0617 0.0713 0.713 intMono L2
ENSG00000079739 PGM1 -725872 sc-eQTL 3.62e-01 -0.0808 0.0885 0.722 ncMono L2
ENSG00000088035 ALG6 -500036 sc-eQTL 2.89e-01 0.103 0.0972 0.722 ncMono L2
ENSG00000116641 DOCK7 179153 sc-eQTL 8.96e-01 -0.0125 0.0959 0.722 ncMono L2
ENSG00000125703 ATG4C 83407 sc-eQTL 2.66e-01 0.0997 0.0893 0.722 ncMono L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 5.86e-01 0.0511 0.0936 0.722 ncMono L2
ENSG00000162607 USP1 431242 sc-eQTL 9.95e-01 -0.000574 0.0957 0.722 ncMono L2
ENSG00000240563 L1TD1 672690 sc-eQTL 5.98e-01 -0.0359 0.0679 0.722 ncMono L2
ENSG00000079739 PGM1 -725872 sc-eQTL 9.64e-01 0.00481 0.106 0.726 pDC L2
ENSG00000088035 ALG6 -500036 sc-eQTL 3.25e-01 0.101 0.103 0.726 pDC L2
ENSG00000116641 DOCK7 179153 sc-eQTL 5.74e-01 -0.0593 0.105 0.726 pDC L2
ENSG00000125703 ATG4C 83407 sc-eQTL 1.16e-01 0.148 0.0937 0.726 pDC L2
ENSG00000142856 ITGB3BP -726182 sc-eQTL 2.47e-02 -0.237 0.104 0.726 pDC L2
ENSG00000162607 USP1 431242 sc-eQTL 9.86e-01 0.00186 0.108 0.726 pDC L2
ENSG00000203965 EFCAB7 -655833 sc-eQTL 7.51e-01 -0.0298 0.0938 0.726 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000079739 PGM1 -725872 sc-eQTL 5.52e-01 -0.0536 0.09 0.712 B_Memory LOneK1K
ENSG00000088035 ALG6 -500036 sc-eQTL 9.88e-01 -0.00146 0.0996 0.712 B_Memory LOneK1K
ENSG00000116641 DOCK7 179153 sc-eQTL 1.21e-01 0.134 0.0859 0.712 B_Memory LOneK1K
ENSG00000125703 ATG4C 83407 sc-eQTL 3.68e-01 -0.0629 0.0697 0.712 B_Memory LOneK1K
ENSG00000142856 ITGB3BP -726182 sc-eQTL 5.27e-01 -0.0582 0.0917 0.712 B_Memory LOneK1K
ENSG00000162607 USP1 431242 sc-eQTL 8.84e-01 0.013 0.0891 0.712 B_Memory LOneK1K
ENSG00000203965 EFCAB7 -655833 sc-eQTL 1.07e-01 -0.154 0.0951 0.712 B_Memory LOneK1K
ENSG00000079739 PGM1 -725872 sc-eQTL 2.13e-02 0.21 0.0904 0.712 B_Naive LOneK1K
ENSG00000088035 ALG6 -500036 sc-eQTL 3.90e-01 0.0811 0.0941 0.712 B_Naive LOneK1K
ENSG00000116641 DOCK7 179153 sc-eQTL 7.50e-01 -0.0281 0.088 0.712 B_Naive LOneK1K
ENSG00000125703 ATG4C 83407 sc-eQTL 1.30e-02 0.166 0.0662 0.712 B_Naive LOneK1K
ENSG00000142856 ITGB3BP -726182 sc-eQTL 1.92e-01 -0.124 0.0946 0.712 B_Naive LOneK1K
ENSG00000162607 USP1 431242 sc-eQTL 6.94e-01 -0.0321 0.0816 0.712 B_Naive LOneK1K
ENSG00000203965 EFCAB7 -655833 sc-eQTL 1.19e-01 -0.148 0.0949 0.712 B_Naive LOneK1K
ENSG00000079739 PGM1 -725872 sc-eQTL 3.41e-02 0.184 0.0864 0.712 CD14_Mono LOneK1K
ENSG00000088035 ALG6 -500036 sc-eQTL 6.49e-01 -0.0385 0.0845 0.712 CD14_Mono LOneK1K
ENSG00000116641 DOCK7 179153 sc-eQTL 8.32e-01 0.0181 0.0852 0.712 CD14_Mono LOneK1K
ENSG00000125703 ATG4C 83407 sc-eQTL 1.66e-01 0.0814 0.0586 0.712 CD14_Mono LOneK1K
ENSG00000142856 ITGB3BP -726182 sc-eQTL 3.33e-01 0.0844 0.0869 0.712 CD14_Mono LOneK1K
ENSG00000162607 USP1 431242 sc-eQTL 3.76e-01 -0.0658 0.0743 0.712 CD14_Mono LOneK1K
ENSG00000240563 L1TD1 672690 sc-eQTL 7.34e-01 0.0274 0.0806 0.712 CD14_Mono LOneK1K
ENSG00000079739 PGM1 -725872 sc-eQTL 6.82e-01 0.0345 0.0839 0.713 CD16_Mono LOneK1K
ENSG00000088035 ALG6 -500036 sc-eQTL 3.13e-01 0.0963 0.0951 0.713 CD16_Mono LOneK1K
ENSG00000116641 DOCK7 179153 sc-eQTL 8.68e-01 -0.0157 0.0943 0.713 CD16_Mono LOneK1K
ENSG00000125703 ATG4C 83407 sc-eQTL 4.81e-01 -0.0566 0.0803 0.713 CD16_Mono LOneK1K
ENSG00000142856 ITGB3BP -726182 sc-eQTL 1.49e-01 0.135 0.0929 0.713 CD16_Mono LOneK1K
ENSG00000162607 USP1 431242 sc-eQTL 3.56e-01 -0.0811 0.0875 0.713 CD16_Mono LOneK1K
ENSG00000240563 L1TD1 672690 sc-eQTL 4.02e-01 -0.0501 0.0597 0.713 CD16_Mono LOneK1K
ENSG00000079739 PGM1 -725872 sc-eQTL 6.29e-01 0.0346 0.0716 0.711 NK_CD56dim LOneK1K
ENSG00000088035 ALG6 -500036 sc-eQTL 4.13e-01 -0.0704 0.0859 0.711 NK_CD56dim LOneK1K
ENSG00000116641 DOCK7 179153 sc-eQTL 9.92e-03 0.197 0.0758 0.711 NK_CD56dim LOneK1K
ENSG00000125703 ATG4C 83407 sc-eQTL 4.10e-01 -0.0633 0.0768 0.711 NK_CD56dim LOneK1K
ENSG00000142856 ITGB3BP -726182 sc-eQTL 3.21e-01 0.0905 0.0909 0.711 NK_CD56dim LOneK1K
ENSG00000162607 USP1 431242 sc-eQTL 4.23e-01 -0.0663 0.0826 0.711 NK_CD56dim LOneK1K
ENSG00000203965 EFCAB7 -655833 sc-eQTL 5.55e-01 0.0595 0.101 0.711 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116641 DOCK7 179171 eQTL 2.48e-05 0.108 0.0256 0.0 0.0 0.239
ENSG00000125703 ATG4C 83407 eQTL 0.0201 0.0455 0.0195 0.0 0.0 0.239
ENSG00000132855 ANGPTL3 270052 pQTL 3.05e-05 0.138 0.0331 0.0 0.0 0.25
ENSG00000142856 ITGB3BP -726182 eQTL 0.0417 -0.0696 0.0341 0.0 0.0 0.239
ENSG00000162607 USP1 431242 eQTL 0.0105 0.0384 0.015 0.0 0.0 0.239
ENSG00000203965 EFCAB7 -655833 eQTL 2.14e-02 0.0644 0.0279 0.00127 0.0 0.239

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116641 DOCK7 179171 3.06e-06 2.49e-06 6.52e-07 2.07e-06 8.63e-07 8.08e-07 2.24e-06 9.8e-07 2.47e-06 1.43e-06 2.57e-06 1.79e-06 3.69e-06 1.4e-06 9e-07 2.07e-06 1.57e-06 2.12e-06 1.42e-06 1.05e-06 1.81e-06 3.36e-06 3.06e-06 1.8e-06 3.89e-06 1.32e-06 1.63e-06 1.81e-06 3.22e-06 2.23e-06 1.96e-06 5.93e-07 6.49e-07 1.75e-06 1.45e-06 8.52e-07 9.14e-07 4.3e-07 1.32e-06 3.82e-07 4.32e-07 3.33e-06 6.49e-07 1.93e-07 3.58e-07 3.31e-07 6.79e-07 2.26e-07 3.41e-07
ENSG00000125703 ATG4C 83407 5.62e-06 6.3e-06 1.3e-06 3.81e-06 2.25e-06 2.21e-06 8.99e-06 1.8e-06 5.48e-06 3.8e-06 8.1e-06 3.67e-06 1.04e-05 2.7e-06 1.46e-06 5.5e-06 3.67e-06 4e-06 2.63e-06 2.63e-06 4.21e-06 7.5e-06 5.73e-06 3.15e-06 9.2e-06 3.24e-06 4.04e-06 2.21e-06 7.09e-06 7.66e-06 3.37e-06 9.54e-07 1.29e-06 3.26e-06 2.44e-06 2.36e-06 1.85e-06 1.74e-06 1.68e-06 9.95e-07 1.14e-06 8.34e-06 9.29e-07 2.27e-07 7.77e-07 1.44e-06 1.25e-06 7.48e-07 4.9e-07