Genes within 1Mb (chr1:53298400:A:G):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000058799 YIPF1 -591398 sc-eQTL 3.95e-01 0.211 0.248 0.948 gdT L2
ENSG00000058804 NDC1 -540063 sc-eQTL 1.27e-01 -0.371 0.241 0.948 gdT L2
ENSG00000081870 HSPB11 -647529 sc-eQTL 5.87e-01 -0.151 0.277 0.948 gdT L2
ENSG00000085840 ORC1 893977 sc-eQTL 8.40e-01 0.0398 0.197 0.948 gdT L2
ENSG00000116157 GPX7 696029 sc-eQTL 8.69e-01 0.0407 0.247 0.948 gdT L2
ENSG00000116171 SCP2 371124 sc-eQTL 4.84e-02 -0.373 0.188 0.948 gdT L2
ENSG00000116205 TCEANC2 -755184 sc-eQTL 1.07e-01 0.359 0.221 0.948 gdT L2
ENSG00000116209 TMEM59 -755104 sc-eQTL 1.84e-01 -0.301 0.225 0.948 gdT L2
ENSG00000116212 LRRC42 -647685 sc-eQTL 6.00e-02 -0.498 0.263 0.948 gdT L2
ENSG00000116221 MRPL37 -885641 sc-eQTL 8.33e-01 -0.0549 0.26 0.948 gdT L2
ENSG00000121310 ECHDC2 371188 sc-eQTL 3.00e-03 -0.805 0.267 0.948 gdT L2
ENSG00000134744 TUT4 744913 sc-eQTL 8.60e-01 -0.0467 0.264 0.948 gdT L2
ENSG00000134748 PRPF38A 893798 sc-eQTL 8.74e-01 -0.042 0.265 0.948 gdT L2
ENSG00000154222 CC2D1B 932207 sc-eQTL 1.58e-01 -0.336 0.237 0.948 gdT L2
ENSG00000157184 CPT2 101608 sc-eQTL 5.56e-01 -0.154 0.262 0.948 gdT L2
ENSG00000157193 LRP8 -30069 sc-eQTL 8.44e-01 0.0508 0.257 0.948 gdT L2
ENSG00000162377 COA7 600053 sc-eQTL 9.54e-01 0.0133 0.231 0.948 gdT L2
ENSG00000162378 ZYG11B 571947 sc-eQTL 5.37e-01 0.155 0.251 0.948 gdT L2
ENSG00000162383 SLC1A7 155768 sc-eQTL 9.51e-01 -0.0109 0.176 0.948 gdT L2
ENSG00000162384 CZIB 77766 sc-eQTL 8.66e-01 0.0415 0.245 0.948 gdT L2
ENSG00000162385 MAGOH 59882 sc-eQTL 8.62e-01 -0.0436 0.25 0.948 gdT L2
ENSG00000182183 SHISAL2A 665232 sc-eQTL 6.79e-01 0.0984 0.237 0.948 gdT L2
ENSG00000215883 CYB5RL -901636 sc-eQTL 6.10e-02 -0.414 0.219 0.948 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162377 COA7 600053 eQTL 0.0417 -0.0973 0.0477 0.0 0.0 0.0397
ENSG00000162378 ZYG11B 571947 eQTL 0.0154 -0.121 0.0497 0.00141 0.0 0.0397
ENSG00000215883 CYB5RL -901636 eQTL 0.0477 0.0937 0.0473 0.0 0.0 0.0397
ENSG00000228929 RPS13P2 525752 eQTL 0.00206 0.193 0.0625 0.00356 0.00395 0.0397


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116209 \N -755104 1.27e-06 1.25e-06 3.41e-07 1.14e-06 3.51e-07 5.92e-07 1.59e-06 2.7e-07 1.73e-06 6.29e-07 2.01e-06 7.37e-07 2.51e-06 4.76e-07 4.4e-07 9.07e-07 7.57e-07 6.85e-07 7.76e-07 4.13e-07 5.8e-07 1.88e-06 8.03e-07 2.92e-07 1.96e-06 2.55e-07 7.06e-07 7.19e-07 8.4e-07 1.03e-06 7.05e-07 6.06e-08 1.28e-07 6.89e-07 3.81e-07 3.16e-07 3.81e-07 2.15e-07 3.48e-07 3.12e-07 4.07e-08 3.4e-06 5.72e-07 1.26e-08 8.45e-08 3.19e-07 8.01e-08 2.31e-08 5.61e-08
ENSG00000134744 \N 744913 1.32e-06 1.31e-06 3.28e-07 1.14e-06 3.36e-07 5.95e-07 1.63e-06 2.64e-07 1.73e-06 6.05e-07 2.07e-06 7.82e-07 2.55e-06 4.89e-07 4.8e-07 9.48e-07 7.7e-07 7.21e-07 8.13e-07 4.32e-07 6.13e-07 1.92e-06 7.78e-07 3.01e-07 2.06e-06 2.44e-07 7.31e-07 7.19e-07 8.81e-07 1.06e-06 7.47e-07 6.2e-08 1.31e-07 6.68e-07 4.28e-07 3.59e-07 3.67e-07 2.21e-07 3.34e-07 2.76e-07 3.68e-08 4.08e-06 5.41e-07 1.27e-08 8.43e-08 2.95e-07 7.36e-08 2.38e-08 5.54e-08
ENSG00000162378 ZYG11B 571947 1.93e-06 2.54e-06 2.59e-07 1.63e-06 4.41e-07 8.1e-07 1.3e-06 3.75e-07 2.27e-06 9.55e-07 2.53e-06 1.3e-06 3.24e-06 1.42e-06 1.36e-06 1.53e-06 1.02e-06 1.55e-06 5.54e-07 4.51e-07 6.57e-07 3.42e-06 1.27e-06 6.51e-07 2.65e-06 6.68e-07 1.04e-06 1.4e-06 1.64e-06 1.3e-06 1.53e-06 4.99e-08 2.42e-07 1.2e-06 5.99e-07 4.8e-07 6.99e-07 3.52e-07 4.82e-07 3.73e-07 1.22e-07 7.12e-06 4.01e-07 8.04e-08 1.93e-07 3.22e-07 1.77e-07 7.69e-08 5.4e-08
ENSG00000230138 \N -69845 3.81e-05 3.54e-05 3.05e-06 9.77e-06 3.28e-06 1.15e-05 3.74e-05 2.74e-06 2.01e-05 8.58e-06 3.47e-05 9.35e-06 4.49e-05 1.07e-05 9.07e-06 1.72e-05 8.12e-06 1.88e-05 3.52e-06 3.59e-06 8.57e-06 4.41e-05 1.77e-05 4.73e-06 3.46e-05 5e-06 1.38e-05 8.93e-06 2.21e-05 1.14e-05 1.51e-05 1.01e-06 1.38e-06 4.05e-06 6.2e-06 3.37e-06 1.76e-06 2.73e-06 2.11e-06 1.34e-06 9.63e-07 7.46e-05 2.99e-06 1.64e-07 7.77e-07 2.96e-06 2.32e-06 6.33e-07 4.77e-07