Genes within 1Mb (chr1:46354843:AT:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 863680 eQTL 1.59e-04 -0.0551 0.0145 0.0 0.0 0.466
ENSG00000085998 POMGNT1 134538 eQTL 4.52e-05 -0.0419 0.0102 0.0 0.0 0.466
ENSG00000085999 RAD54L 107155 eQTL 8.05e-03 0.0511 0.0193 0.0 0.0 0.466
ENSG00000086015 MAST2 567856 eQTL 3.01e-06 0.0897 0.0191 0.0 0.0 0.466
ENSG00000117461 PIK3R3 221807 eQTL 2.14e-02 0.0455 0.0197 0.0014 0.0 0.466
ENSG00000117480 FAAH -39474 eQTL 5.91e-06 0.0937 0.0206 0.0974 0.071 0.466
ENSG00000117481 NSUN4 14666 eQTL 2.97e-11 -0.157 0.0233 0.0229 0.0163 0.466
ENSG00000132128 LRRC41 51235 eQTL 4.16e-02 -0.0342 0.0168 0.0 0.0 0.466
ENSG00000197429 IPP 604193 eQTL 4.56e-02 0.0398 0.0199 0.0 0.0 0.466
ENSG00000225447 RPS15AP10 708646 eQTL 4.71e-03 -0.0924 0.0326 0.0 0.0 0.466
ENSG00000232022 FAAHP1 -77286 eQTL 2.40e-02 -0.0661 0.0292 0.00741 0.00215 0.466
ENSG00000234329 AL604028.2 703017 eQTL 3.23e-05 -0.101 0.0241 0.0 0.0 0.466


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 863680 2.69e-07 1.01e-07 3.44e-08 1.68e-07 1.02e-07 1e-07 1.53e-07 5.24e-08 1.37e-07 4.23e-08 1.56e-07 7.58e-08 1.41e-07 6.07e-08 4.89e-08 8.01e-08 5.1e-08 1.07e-07 5.2e-08 3.15e-08 1.06e-07 1.26e-07 1.26e-07 5.19e-08 1.29e-07 1.09e-07 1.1e-07 8.45e-08 9.97e-08 1.12e-07 9.58e-08 3.19e-08 2.75e-08 8.21e-08 9.13e-08 4.14e-08 4.85e-08 8.28e-08 8.22e-08 3.07e-08 3.44e-08 1.35e-07 3.91e-08 3.84e-08 1.12e-07 1.72e-08 1.46e-07 4.96e-09 4.72e-08
ENSG00000085998 POMGNT1 134538 9.76e-06 7.21e-06 7.59e-07 2.44e-06 8.54e-07 2.6e-06 9.6e-06 3.75e-07 4.96e-06 2.07e-06 6.05e-06 2.72e-06 7.48e-06 2.34e-06 2.18e-06 3.78e-06 1.92e-06 3.69e-06 1.34e-06 7.96e-07 3.04e-06 8.98e-06 5.89e-06 1.08e-06 8.16e-06 1.17e-06 2.42e-06 1.72e-06 4.46e-06 3.61e-06 2.53e-06 5.93e-08 6.23e-07 1.52e-06 1.96e-06 6.66e-07 7.3e-07 4.47e-07 1.13e-06 3.28e-07 2.44e-07 1.4e-05 1.28e-06 1.67e-07 3.69e-07 1.48e-06 8.03e-07 1.69e-07 6.06e-08
ENSG00000085999 RAD54L 107155 1.36e-05 9.6e-06 1.29e-06 3.38e-06 1.59e-06 3.82e-06 1.08e-05 6.41e-07 4.67e-06 2.82e-06 8.54e-06 3.27e-06 1.03e-05 2.13e-06 3.21e-06 5.84e-06 3.79e-06 3.78e-06 1.45e-06 1.41e-06 2.85e-06 1.12e-05 7.91e-06 1.87e-06 1.03e-05 1.81e-06 3.4e-06 1.73e-06 7e-06 4.43e-06 2.74e-06 3.87e-08 7.94e-07 2.15e-06 2.04e-06 9.5e-07 6.94e-07 4.73e-07 1.3e-06 4.16e-07 2.26e-07 1.86e-05 1.49e-06 1.35e-07 4.86e-07 1.74e-06 8.07e-07 2.29e-07 6.58e-08
ENSG00000086015 MAST2 567856 5.74e-07 1.59e-07 3.88e-08 1.8e-07 8.92e-08 1.26e-07 4.14e-07 5.33e-08 1.47e-07 5.42e-08 2.18e-07 9e-08 4.05e-07 7.37e-08 5.99e-08 7.97e-08 3.98e-08 1.27e-07 6.32e-08 4.21e-08 1.22e-07 2.3e-07 1.86e-07 4.54e-08 1.98e-07 1.16e-07 1.17e-07 9.65e-08 1.24e-07 1.59e-07 1.06e-07 3.59e-08 2.92e-08 9.08e-08 3.52e-08 3.97e-08 4.84e-08 9.56e-08 6.56e-08 6.07e-08 3.95e-08 3.85e-07 5.39e-08 1.43e-08 9.88e-08 6.68e-09 1.3e-07 4.82e-09 4.72e-08
ENSG00000117480 FAAH -39474 7.02e-05 3.58e-05 6.44e-06 1.28e-05 4.22e-06 1.46e-05 4.47e-05 3.42e-06 2.57e-05 1.22e-05 3.66e-05 1.21e-05 4.54e-05 1.28e-05 7.32e-06 1.86e-05 1.77e-05 2.39e-05 6.96e-06 4.47e-06 1.3e-05 3.87e-05 3.5e-05 6.56e-06 4.33e-05 6.43e-06 1.41e-05 9.63e-06 3.53e-05 1.77e-05 1.53e-05 1.03e-06 1.47e-06 6.16e-06 7.79e-06 4.48e-06 1.71e-06 2.73e-06 3.31e-06 1.45e-06 9.79e-07 5.11e-05 4.84e-06 2.81e-07 2.07e-06 3.72e-06 3.35e-06 1.16e-06 6.24e-07
ENSG00000117481 NSUN4 14666 0.000102 6.52e-05 7.74e-06 1.97e-05 8.59e-06 2.44e-05 7.63e-05 6.24e-06 5.69e-05 2.21e-05 7.69e-05 2.78e-05 9.71e-05 2.54e-05 9.95e-06 3.56e-05 3.08e-05 4.44e-05 1.31e-05 9.36e-06 2.65e-05 6.78e-05 5.97e-05 1.24e-05 7.2e-05 1.37e-05 2.45e-05 1.93e-05 6.58e-05 3.66e-05 3.27e-05 1.65e-06 3.24e-06 9.25e-06 1.37e-05 7.75e-06 3.59e-06 3.42e-06 6.28e-06 3.56e-06 1.77e-06 7.99e-05 6.77e-06 3.62e-07 3.42e-06 5.59e-06 5.95e-06 2.07e-06 1.74e-06
ENSG00000159588 \N 730786 2.77e-07 1.19e-07 3.31e-08 1.76e-07 9.91e-08 8.33e-08 1.99e-07 5.21e-08 1.41e-07 4.38e-08 1.55e-07 8.03e-08 1.69e-07 6.21e-08 4.84e-08 7.26e-08 4.94e-08 1.1e-07 5.19e-08 3.59e-08 1.04e-07 1.26e-07 1.45e-07 4.99e-08 1.32e-07 1.13e-07 1.11e-07 8.7e-08 1.03e-07 1.07e-07 9.73e-08 3.19e-08 2.74e-08 8.68e-08 8.82e-08 4.26e-08 4.91e-08 8.78e-08 8.19e-08 3.77e-08 3.51e-08 1.5e-07 3.91e-08 2.4e-08 1.12e-07 1.83e-08 1.45e-07 4.96e-09 4.72e-08
ENSG00000159658 \N -364271 1.3e-06 9.19e-07 1.27e-07 3.58e-07 1.07e-07 4.73e-07 1.52e-06 6.75e-08 6.27e-07 2.43e-07 1.37e-06 3.91e-07 1.73e-06 1.57e-07 3.56e-07 3.57e-07 2.07e-07 3.95e-07 2.6e-07 7.26e-08 2.09e-07 1.59e-06 8.27e-07 4.17e-08 1.47e-06 2e-07 4.55e-07 2.19e-07 5.16e-07 8.5e-07 4.32e-07 4.03e-08 5.2e-08 4.87e-07 3.47e-07 2.74e-08 5.54e-08 6.78e-08 4.23e-08 9.81e-09 3.46e-08 2.01e-06 5.53e-08 6.41e-08 3.4e-08 1.22e-07 8.67e-08 3.89e-09 4.85e-08
ENSG00000234329 AL604028.2 703017 2.95e-07 1.3e-07 3.69e-08 1.78e-07 9.91e-08 8.45e-08 2.16e-07 5.35e-08 1.4e-07 4.38e-08 1.57e-07 7.88e-08 1.87e-07 6.21e-08 5.14e-08 7.17e-08 4.94e-08 1.14e-07 5.21e-08 3.74e-08 1.04e-07 1.26e-07 1.44e-07 4.99e-08 1.37e-07 1.15e-07 1.08e-07 8.71e-08 1.05e-07 9.49e-08 9.91e-08 3.19e-08 2.74e-08 8.44e-08 8.96e-08 4.19e-08 4.85e-08 9.06e-08 8.3e-08 3.87e-08 3.27e-08 1.55e-07 3.99e-08 1.81e-08 1.09e-07 1.83e-08 1.45e-07 4.96e-09 4.72e-08