Genes within 1Mb (chr1:46335953:G:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 844790 eQTL 1.00e-02 0.188 0.073 0.0 0.0 0.0103
ENSG00000085998 POMGNT1 115648 eQTL 3.74e-02 0.107 0.0515 0.0 0.0 0.0103
ENSG00000117448 AKR1A1 785410 eQTL 1.24e-02 -0.138 0.0552 0.0 0.0 0.0103
ENSG00000117450 PRDX1 812906 pQTL 3.51e-02 0.173 0.0819 0.0 0.0 0.0105
ENSG00000117480 FAAH -58364 eQTL 1.79e-12 0.725 0.101 0.00311 0.00323 0.0103
ENSG00000117481 NSUN4 -4224 eQTL 1.16e-47 1.64 0.107 0.0 0.0 0.0103
ENSG00000132773 TOE1 995901 eQTL 4.01e-02 -0.133 0.0649 0.0 0.0 0.0103
ENSG00000142961 MOB3C -280938 eQTL 4.70e-02 -0.184 0.0924 0.0 0.0 0.0103
ENSG00000159588 CCDC17 711896 eQTL 2.00e-05 -0.296 0.069 0.0 0.0 0.0103
ENSG00000173660 UQCRH 32255 eQTL 4.27e-02 -0.0979 0.0483 0.0 0.0 0.0103
ENSG00000225447 RPS15AP10 689756 eQTL 2.19e-02 -0.376 0.164 0.0 0.0 0.0103


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 844790 2.66e-07 1.16e-07 3.71e-08 1.8e-07 8.83e-08 9.87e-08 1.42e-07 5.2e-08 1.41e-07 4.4e-08 1.56e-07 7.75e-08 1.26e-07 6.38e-08 5.55e-08 7.26e-08 3.9e-08 1.14e-07 5.39e-08 4.2e-08 1.04e-07 1.27e-07 1.26e-07 4.05e-08 1.33e-07 1.14e-07 1.11e-07 8.71e-08 1.03e-07 1.1e-07 9.73e-08 3.98e-08 3.26e-08 8.82e-08 8.87e-08 3.77e-08 5.08e-08 9.25e-08 6.55e-08 3.54e-08 4.19e-08 1.35e-07 4.7e-08 1.09e-08 5.87e-08 1.67e-08 1.22e-07 3.95e-09 4.94e-08
ENSG00000117448 AKR1A1 785410 2.61e-07 1.19e-07 4.08e-08 1.86e-07 9.01e-08 9.65e-08 1.44e-07 5.4e-08 1.4e-07 4.57e-08 1.62e-07 8.14e-08 1.33e-07 6.38e-08 5.53e-08 7.17e-08 3.94e-08 1.18e-07 5.82e-08 4.07e-08 1.08e-07 1.26e-07 1.32e-07 3.68e-08 1.32e-07 1.16e-07 1.08e-07 9.15e-08 1.05e-07 1.02e-07 9.91e-08 3.92e-08 3.3e-08 8.65e-08 8.96e-08 3.93e-08 5.31e-08 9.36e-08 6.55e-08 3.55e-08 4.83e-08 1.31e-07 5.24e-08 1.43e-08 5.75e-08 1.66e-08 1.24e-07 3.89e-09 4.88e-08
ENSG00000117480 FAAH -58364 7.88e-06 1.02e-05 1.28e-06 6.02e-06 1.9e-06 4.2e-06 1.06e-05 1.92e-06 9.26e-06 4.74e-06 1.2e-05 5.23e-06 1.48e-05 3.77e-06 2.18e-06 5.77e-06 3.83e-06 6.21e-06 2.48e-06 2.85e-06 4.38e-06 8.03e-06 7e-06 2.76e-06 1.28e-05 2.93e-06 4.56e-06 3.27e-06 9.77e-06 7.95e-06 5.43e-06 5.62e-07 8.4e-07 2.85e-06 4.48e-06 2.1e-06 1.39e-06 1.74e-06 1.61e-06 1e-06 7.54e-07 1.17e-05 1.35e-06 1.61e-07 7.85e-07 1.21e-06 9.03e-07 7.12e-07 5.76e-07
ENSG00000117481 NSUN4 -4224 3.04e-05 3.07e-05 6.12e-06 1.54e-05 5.6e-06 1.42e-05 4.36e-05 4.2e-06 2.93e-05 1.47e-05 3.69e-05 1.63e-05 4.85e-05 1.41e-05 6.95e-06 1.77e-05 1.69e-05 2.33e-05 7.92e-06 6.6e-06 1.41e-05 3.08e-05 2.96e-05 8.69e-06 4.38e-05 7.46e-06 1.33e-05 1.28e-05 3.31e-05 2.73e-05 1.92e-05 1.61e-06 2.75e-06 7.07e-06 1.15e-05 5.84e-06 3.11e-06 3.18e-06 4.84e-06 3.48e-06 1.72e-06 3.56e-05 3.38e-06 3.62e-07 2.34e-06 3.84e-06 4.09e-06 1.61e-06 1.57e-06
ENSG00000159588 CCDC17 711896 2.64e-07 1.3e-07 4.91e-08 1.9e-07 9.21e-08 9.8e-08 1.53e-07 5.48e-08 1.44e-07 4.74e-08 1.62e-07 8.59e-08 1.41e-07 6.76e-08 6e-08 7.37e-08 3.93e-08 1.26e-07 6.07e-08 4e-08 1.19e-07 1.27e-07 1.39e-07 2.95e-08 1.4e-07 1.14e-07 1.06e-07 9.36e-08 1.08e-07 1.05e-07 9.7e-08 3.87e-08 3.56e-08 8.68e-08 8.38e-08 3.6e-08 5.61e-08 8.72e-08 6.71e-08 3.87e-08 4.41e-08 1.35e-07 5.2e-08 1.13e-08 5.19e-08 1.99e-08 1.19e-07 3.81e-09 5e-08
ENSG00000159596 \N 647772 2.69e-07 1.35e-07 5.49e-08 2.05e-07 9.24e-08 9.48e-08 1.6e-07 5.66e-08 1.45e-07 5.42e-08 1.55e-07 9e-08 1.45e-07 7.13e-08 6.02e-08 7.36e-08 4.01e-08 1.27e-07 6.92e-08 4.23e-08 1.26e-07 1.24e-07 1.45e-07 2.91e-08 1.5e-07 1.25e-07 1.07e-07 9.65e-08 1.16e-07 1e-07 1.02e-07 3.26e-08 3.96e-08 8.34e-08 7.02e-08 3.53e-08 5.51e-08 8.89e-08 6.76e-08 3.92e-08 3.57e-08 1.36e-07 5.12e-08 2.1e-08 4.67e-08 1.84e-08 1.22e-07 1.88e-09 4.82e-08