Genes within 1Mb (chr1:46193238:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 702075 eQTL 1.07e-02 0.038 0.0149 0.0 0.0 0.408
ENSG00000085998 POMGNT1 -27067 eQTL 5.45e-01 0.00635 0.0105 0.0 0.0049 0.408
ENSG00000085999 RAD54L -54450 eQTL 2.70e-02 -0.0435 0.0196 0.0 0.0 0.408
ENSG00000086015 MAST2 406251 eQTL 1.99e-06 -0.093 0.0194 0.0 0.0 0.408
ENSG00000117450 PRDX1 670191 eQTL 2.05e-03 0.0355 0.0115 0.0 0.0 0.408
ENSG00000117461 PIK3R3 60202 eQTL 2.28e-02 -0.0459 0.0201 0.0 0.0 0.408
ENSG00000117480 FAAH -201079 eQTL 1.91e-04 -0.0788 0.021 0.0 0.0 0.408
ENSG00000132128 LRRC41 -110370 eQTL 2.57e-04 0.0623 0.017 0.00518 0.025 0.408
ENSG00000132781 MUTYH 852768 eQTL 7.66e-03 -0.035 0.0131 0.0 0.0 0.408
ENSG00000159592 GPBP1L1 505125 eQTL 3.54e-04 -0.0381 0.0106 0.0 0.0 0.408
ENSG00000159658 EFCAB14 -525876 eQTL 2.51e-02 0.0427 0.019 0.0 0.0 0.408
ENSG00000186603 HPDL 866333 eQTL 3.57e-02 -0.057 0.0271 0.00131 0.0 0.408
ENSG00000197429 IPP 442588 eQTL 1.89e-02 -0.0476 0.0202 0.0 0.0 0.408
ENSG00000225447 RPS15AP10 547041 eQTL 3.17e-03 0.0983 0.0332 0.0 0.0 0.408
ENSG00000234329 AL604028.2 541412 eQTL 1.11e-03 0.0807 0.0247 0.0 0.0 0.408
ENSG00000280670 CCDC163 693159 eQTL 9.24e-01 0.00356 0.0371 0.00216 0.0 0.408


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 702075 2.91e-07 1.7e-07 5.72e-08 2.15e-07 9.87e-08 8.33e-08 1.9e-07 5.53e-08 1.44e-07 6.4e-08 1.63e-07 1.19e-07 1.87e-07 7.95e-08 6.25e-08 7.97e-08 4.31e-08 1.51e-07 6.92e-08 5.2e-08 1.27e-07 1.39e-07 1.58e-07 2.83e-08 1.85e-07 1.23e-07 1.18e-07 1.1e-07 1.24e-07 1e-07 1.09e-07 4.85e-08 3.73e-08 8.7e-08 3.52e-08 2.69e-08 3.7e-08 8.68e-08 6.76e-08 6.19e-08 5.81e-08 1.5e-07 5.12e-08 7.39e-09 2.64e-08 1.68e-08 1e-07 1.92e-09 5e-08
ENSG00000085999 RAD54L -54450 1.3e-05 1.71e-05 2.23e-06 9.17e-06 2.42e-06 6.16e-06 1.88e-05 2.96e-06 1.41e-05 6.68e-06 1.87e-05 7.15e-06 2.52e-05 5.67e-06 4.37e-06 9.02e-06 7.29e-06 1.11e-05 3.54e-06 3.39e-06 6.98e-06 1.34e-05 1.32e-05 4.02e-06 2.49e-05 4.5e-06 7.58e-06 6.41e-06 1.48e-05 1.03e-05 1.04e-05 1.06e-06 1.24e-06 3.76e-06 6.13e-06 2.82e-06 1.77e-06 2.16e-06 1.96e-06 1.65e-06 9.75e-07 1.89e-05 2.24e-06 2.07e-07 9.9e-07 2.44e-06 2.02e-06 6.27e-07 5e-07
ENSG00000086015 MAST2 406251 9.83e-07 8.81e-07 1.2e-07 4.43e-07 1.07e-07 2.67e-07 6.19e-07 1.4e-07 6.52e-07 2.82e-07 1.04e-06 5.01e-07 9.77e-07 1.56e-07 2.48e-07 2.99e-07 5.92e-07 4.16e-07 2.57e-07 1.91e-07 2.51e-07 5.11e-07 3.99e-07 2.19e-07 1.22e-06 2.56e-07 3.48e-07 3.95e-07 4.33e-07 6.27e-07 3.95e-07 3.8e-08 4.62e-08 1.73e-07 3.42e-07 1.44e-07 1.91e-07 1.08e-07 6.74e-08 1.84e-08 1.22e-07 7.36e-07 5.51e-08 1.06e-08 1.69e-07 2.64e-08 1.27e-07 2.44e-08 5.93e-08
ENSG00000117450 PRDX1 670191 3.02e-07 1.78e-07 6.04e-08 2.26e-07 1.03e-07 8.33e-08 2.1e-07 5.43e-08 1.59e-07 6.75e-08 1.69e-07 1.23e-07 2.05e-07 8e-08 5.82e-08 7.98e-08 4.35e-08 1.64e-07 7.18e-08 5.48e-08 1.22e-07 1.47e-07 1.58e-07 3.07e-08 2.09e-07 1.31e-07 1.17e-07 1.17e-07 1.31e-07 1.05e-07 1.21e-07 4.58e-08 3.51e-08 9.3e-08 3.02e-08 3.07e-08 5.02e-08 8.89e-08 6.41e-08 6.67e-08 6.28e-08 1.59e-07 4.87e-08 1.09e-08 3.32e-08 1.55e-08 8.74e-08 1.96e-09 4.8e-08
ENSG00000117480 FAAH -201079 2.74e-06 3.66e-06 3.08e-07 2.05e-06 4.86e-07 8.48e-07 1.8e-06 6.11e-07 1.97e-06 9.51e-07 2.49e-06 1.44e-06 3.31e-06 1.39e-06 8.08e-07 1.74e-06 1.49e-06 2.17e-06 8.1e-07 1.27e-06 1.16e-06 3.02e-06 2.3e-06 9.79e-07 3.74e-06 1.33e-06 1.31e-06 1.78e-06 1.92e-06 1.66e-06 1.93e-06 4.71e-07 4.8e-07 1.24e-06 1.02e-06 8.66e-07 7.8e-07 4.37e-07 7.85e-07 4.35e-07 3.05e-07 3.28e-06 5.97e-07 1.75e-07 3.45e-07 3.13e-07 6.75e-07 2.4e-07 2.13e-07
ENSG00000132128 LRRC41 -110370 5.86e-06 9.27e-06 6.2e-07 4.02e-06 1.49e-06 1.98e-06 8.6e-06 1.29e-06 5.22e-06 3.43e-06 8.95e-06 3.68e-06 1.06e-05 3.14e-06 1.06e-06 4.76e-06 3.61e-06 3.76e-06 1.66e-06 1.7e-06 3.19e-06 7.41e-06 5.2e-06 1.97e-06 9.94e-06 2.12e-06 3.57e-06 2.51e-06 6.12e-06 5.03e-06 3.94e-06 5.5e-07 6.95e-07 2.31e-06 2.4e-06 1.29e-06 1.12e-06 5.43e-07 9.07e-07 8.28e-07 6.93e-07 8.32e-06 8.59e-07 1.55e-07 7.32e-07 9.69e-07 1e-06 6.85e-07 5.13e-07
ENSG00000142961 \N -423653 8.7e-07 8.5e-07 1.27e-07 4.34e-07 9.29e-08 2.24e-07 5.8e-07 1.11e-07 5.49e-07 2.37e-07 9.46e-07 4.31e-07 8.6e-07 1.6e-07 2.15e-07 2.83e-07 5.34e-07 4.11e-07 2.42e-07 1.82e-07 2.35e-07 4.38e-07 4e-07 1.76e-07 9.82e-07 2.6e-07 2.94e-07 3.24e-07 3.88e-07 5.36e-07 3.68e-07 4.47e-08 5.19e-08 1.49e-07 3.36e-07 1.09e-07 1.38e-07 9.33e-08 6.63e-08 8.59e-09 1.23e-07 6.19e-07 4.47e-08 1.52e-08 1.45e-07 1.44e-08 1.17e-07 1.79e-08 5.43e-08
ENSG00000159588 \N 569181 3.77e-07 3.23e-07 6.72e-08 2.44e-07 1.1e-07 1.08e-07 2.95e-07 6.12e-08 2.04e-07 1.11e-07 2.68e-07 1.82e-07 3.18e-07 8.54e-08 6.2e-08 1.06e-07 8.64e-08 2.33e-07 7.53e-08 8.69e-08 1.39e-07 2.09e-07 1.89e-07 3.67e-08 3.14e-07 1.71e-07 1.29e-07 1.68e-07 1.36e-07 1.46e-07 1.59e-07 8.48e-08 4.23e-08 1.02e-07 6.35e-08 3.5e-08 6.87e-08 6.98e-08 5.69e-08 7.55e-08 4.07e-08 2.19e-07 3.53e-08 7.32e-09 4.99e-08 1.01e-08 7.8e-08 0.0 4.67e-08
ENSG00000159592 GPBP1L1 505125 5.74e-07 5.33e-07 8.55e-08 3.19e-07 1.11e-07 1.5e-07 4.05e-07 7.56e-08 2.75e-07 1.46e-07 4.39e-07 2.55e-07 4.74e-07 9.48e-08 9.33e-08 1.49e-07 1.73e-07 2.93e-07 1.13e-07 8.11e-08 1.65e-07 2.63e-07 2.63e-07 7.36e-08 4.88e-07 2.07e-07 1.74e-07 2.13e-07 1.98e-07 2.19e-07 2.11e-07 6.42e-08 5.09e-08 1.17e-07 1.39e-07 5.23e-08 1.06e-07 6e-08 5.7e-08 3.01e-08 4.49e-08 3.26e-07 2.62e-08 2.07e-08 8.43e-08 1.3e-08 1.04e-07 2.85e-09 4.68e-08
ENSG00000162415 \N 887029 2.69e-07 1.34e-07 4.08e-08 1.86e-07 9.21e-08 1e-07 1.49e-07 5.19e-08 1.45e-07 4.74e-08 1.54e-07 8.55e-08 1.41e-07 6.56e-08 6e-08 7.3e-08 3.93e-08 1.21e-07 5.82e-08 4.1e-08 1.08e-07 1.28e-07 1.39e-07 3.42e-08 1.46e-07 1.14e-07 1.06e-07 9.61e-08 1.08e-07 1.1e-07 9.7e-08 2.96e-08 3.3e-08 8.55e-08 8.76e-08 3.94e-08 5.22e-08 9.23e-08 6.55e-08 4.47e-08 5.43e-08 1.35e-07 4.89e-08 1.2e-08 4.92e-08 1.83e-08 1.21e-07 3.81e-09 4.81e-08
ENSG00000225447 RPS15AP10 547041 4.21e-07 3.77e-07 6.99e-08 2.61e-07 1.07e-07 1.25e-07 3.33e-07 5.84e-08 2.35e-07 1.15e-07 3.21e-07 1.96e-07 3.77e-07 8.26e-08 6.93e-08 1.14e-07 9.53e-08 2.66e-07 8.68e-08 7.49e-08 1.35e-07 2.24e-07 2.11e-07 4.34e-08 3.55e-07 1.86e-07 1.37e-07 1.67e-07 1.48e-07 1.8e-07 1.78e-07 7.59e-08 4.27e-08 9.98e-08 7.55e-08 4.68e-08 7.97e-08 6.32e-08 4.83e-08 5.64e-08 3.31e-08 2.6e-07 3.2e-08 1.53e-08 5.84e-08 8.24e-09 9.1e-08 0.0 4.83e-08
ENSG00000232022 \N -238891 1.59e-06 2.55e-06 2.17e-07 1.44e-06 3.88e-07 6.42e-07 1.26e-06 4.13e-07 1.77e-06 7.22e-07 1.83e-06 1.29e-06 2.63e-06 6.86e-07 3.96e-07 1.11e-06 1.03e-06 1.18e-06 5.38e-07 6.26e-07 6.18e-07 1.94e-06 1.64e-06 6.79e-07 2.65e-06 8.72e-07 1e-06 1.17e-06 1.64e-06 1.31e-06 7.71e-07 3.04e-07 3e-07 5.55e-07 7.04e-07 5.24e-07 6.94e-07 3.59e-07 5.07e-07 1.71e-07 3.53e-07 2.48e-06 4.24e-07 1.3e-07 3.71e-07 3.32e-07 3.2e-07 1.71e-07 2.05e-07
ENSG00000234329 AL604028.2 541412 4.37e-07 4e-07 7.45e-08 2.62e-07 1.06e-07 1.28e-07 3.42e-07 6.2e-08 2.38e-07 1.21e-07 3.25e-07 2.04e-07 3.77e-07 8.55e-08 7.35e-08 1.14e-07 1.01e-07 2.66e-07 8.93e-08 7.26e-08 1.39e-07 2.3e-07 2.2e-07 4.81e-08 3.7e-07 1.86e-07 1.37e-07 1.77e-07 1.47e-07 1.81e-07 1.86e-07 7.79e-08 4.34e-08 9.9e-08 8.75e-08 4.77e-08 8.75e-08 6.11e-08 4.9e-08 5.8e-08 2.81e-08 2.65e-07 3.26e-08 1.55e-08 6.21e-08 8.42e-09 9.26e-08 0.0 4.68e-08