Genes within 1Mb (chr1:46176155:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 684992 eQTL 2.69e-04 0.0536 0.0146 0.0 0.0 0.48
ENSG00000085998 POMGNT1 -44150 eQTL 1.23e-04 0.0398 0.0103 0.0 0.0 0.48
ENSG00000086015 MAST2 389168 eQTL 1.45e-07 -0.102 0.0192 0.0 0.0 0.48
ENSG00000117448 AKR1A1 625612 eQTL 3.70e-04 0.0396 0.0111 0.00245 0.00109 0.48
ENSG00000117450 PRDX1 653108 eQTL 7.02e-03 0.0307 0.0114 0.0 0.0 0.48
ENSG00000117461 PIK3R3 43119 eQTL 1.55e-05 -0.0859 0.0198 0.0 0.0 0.48
ENSG00000117480 FAAH -218162 eQTL 6.50e-03 -0.057 0.0209 0.0 0.0 0.48
ENSG00000132128 LRRC41 -127453 eQTL 1.01e-02 0.0435 0.0169 0.00144 0.0 0.48
ENSG00000142961 MOB3C -440736 eQTL 4.86e-02 0.0367 0.0186 0.0 0.0 0.48
ENSG00000159588 CCDC17 552098 eQTL 2.00e-02 -0.0326 0.014 0.0 0.0 0.48
ENSG00000159592 GPBP1L1 488042 eQTL 4.96e-04 -0.0367 0.0105 0.0 0.0 0.48
ENSG00000159596 TMEM69 487974 eQTL 3.41e-02 -0.0459 0.0217 0.0 0.0 0.48
ENSG00000173660 UQCRH -127543 eQTL 4.33e-02 0.0197 0.00972 0.0 0.0 0.48
ENSG00000186603 HPDL 849250 eQTL 5.37e-02 -0.0518 0.0268 0.00108 0.0 0.48
ENSG00000197429 IPP 425505 eQTL 1.87e-04 -0.0747 0.0199 0.0034 0.00284 0.48
ENSG00000225447 RPS15AP10 529958 eQTL 6.64e-05 0.131 0.0328 0.0 0.0 0.48
ENSG00000234329 AL604028.2 524329 eQTL 9.31e-07 0.12 0.0242 0.0 0.0 0.48
ENSG00000280670 CCDC163 676076 eQTL 4.14e-05 0.15 0.0364 0.0 0.0 0.48


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 389168 8.25e-07 6.26e-07 6.72e-08 3.99e-07 1.07e-07 1.77e-07 7.25e-07 9.78e-08 2.75e-07 1.5e-07 5.58e-07 2.55e-07 8.34e-07 1.34e-07 1.68e-07 1.46e-07 3.24e-07 3.3e-07 1.5e-07 1.63e-07 1.59e-07 2.7e-07 3.99e-07 1.19e-07 8.33e-07 2.33e-07 2.52e-07 1.77e-07 5.41e-07 4.27e-07 2.43e-07 7.91e-08 5.6e-08 1.27e-07 3.55e-07 3.18e-08 1.08e-07 7.62e-08 5.25e-08 7.89e-08 4.45e-08 3.66e-07 2.62e-08 1.23e-08 1.1e-07 1.91e-08 9.34e-08 0.0 5.71e-08
ENSG00000117450 PRDX1 653108 2.8e-07 1.33e-07 3.72e-08 2.09e-07 1.01e-07 9.05e-08 2.24e-07 5.48e-08 1.45e-07 4.94e-08 1.57e-07 9e-08 1.87e-07 7.64e-08 6.18e-08 7.53e-08 4.24e-08 1.33e-07 5.97e-08 4.95e-08 1.19e-07 1.27e-07 1.62e-07 2.91e-08 1.72e-07 1.21e-07 1.1e-07 9.61e-08 1.34e-07 1.07e-07 1.06e-07 3.03e-08 3.68e-08 8.23e-08 3.71e-08 3.77e-08 4.41e-08 8.63e-08 6.37e-08 4.19e-08 5.39e-08 1.4e-07 5.2e-08 1.55e-08 3.2e-08 1.8e-08 1.22e-07 3.78e-09 4.99e-08
ENSG00000117480 FAAH -218162 1.31e-06 1.33e-06 2.88e-07 1.27e-06 3.23e-07 5.88e-07 1.44e-06 3.57e-07 1.39e-06 3.83e-07 1.88e-06 6.36e-07 2.52e-06 2.77e-07 5.4e-07 7.78e-07 1.03e-06 6.91e-07 7.25e-07 5.05e-07 4.19e-07 1.38e-06 1.56e-06 6.35e-07 2.47e-06 5.15e-07 9.35e-07 6.46e-07 1.72e-06 1.23e-06 6.78e-07 3.8e-08 2.19e-07 5.42e-07 5.82e-07 2.04e-07 5.1e-07 1.9e-07 1.73e-07 4.12e-08 2.82e-07 1.53e-06 5.37e-08 9.69e-08 2.01e-07 1.29e-07 1.9e-07 8.41e-08 8.61e-08
ENSG00000132128 LRRC41 -127453 3.53e-06 3.64e-06 2.5e-07 1.93e-06 4.76e-07 8.18e-07 5.66e-06 6.19e-07 1.85e-06 7.34e-07 2.48e-06 1.31e-06 4.18e-06 1.47e-06 9.19e-07 1.17e-06 1.56e-06 2.24e-06 7.31e-07 1.28e-06 7.69e-07 2.91e-06 3.84e-06 1.05e-06 4.06e-06 1.23e-06 1.39e-06 1.05e-06 4.3e-06 2.45e-06 1.81e-06 2.54e-07 4.47e-07 8.91e-07 1.91e-06 4.86e-07 7.47e-07 4.24e-07 5.07e-07 2.1e-07 3.59e-07 3.26e-06 3.73e-07 1.66e-07 3.38e-07 3.46e-07 3.69e-07 1.38e-07 2.9e-07
ENSG00000142961 MOB3C -440736 6.09e-07 4e-07 6.15e-08 3.58e-07 1.05e-07 1.44e-07 5.8e-07 7.52e-08 2.04e-07 1.11e-07 3.32e-07 1.82e-07 5.54e-07 1.01e-07 1.07e-07 1.06e-07 1.38e-07 2.66e-07 8e-08 8.25e-08 1.33e-07 2.09e-07 3.08e-07 5.11e-08 5.15e-07 1.9e-07 1.74e-07 1.46e-07 3.58e-07 2.1e-07 1.78e-07 5.4e-08 5.64e-08 9.09e-08 2.82e-07 3.22e-08 8.75e-08 5.8e-08 5.69e-08 7.78e-08 3.64e-08 2.43e-07 3.65e-08 5.61e-09 7.89e-08 9.12e-09 7.66e-08 0.0 4.59e-08
ENSG00000159588 CCDC17 552098 3.21e-07 1.78e-07 4.69e-08 2.36e-07 9.94e-08 8.89e-08 3.42e-07 5.62e-08 1.5e-07 6.4e-08 1.66e-07 1.19e-07 2.55e-07 8.15e-08 5.36e-08 7.74e-08 4.63e-08 1.64e-07 7.12e-08 6.02e-08 1.25e-07 1.31e-07 1.86e-07 3.58e-08 2.36e-07 1.31e-07 1.2e-07 1.06e-07 1.48e-07 1.06e-07 1.21e-07 3.9e-08 4.23e-08 9.76e-08 6.98e-08 3.62e-08 6.04e-08 8.17e-08 6.76e-08 4.08e-08 6.14e-08 1.52e-07 5.22e-08 1.83e-08 3.3e-08 6.39e-09 1.11e-07 1.92e-09 4.91e-08
ENSG00000159658 \N -542959 3.21e-07 1.83e-07 4.91e-08 2.45e-07 1.02e-07 8.75e-08 3.57e-07 5.56e-08 1.44e-07 6.75e-08 1.69e-07 1.2e-07 2.94e-07 8.44e-08 5.69e-08 7.97e-08 5.27e-08 1.72e-07 7.18e-08 6.29e-08 1.27e-07 1.39e-07 1.89e-07 3.42e-08 2.59e-07 1.31e-07 1.22e-07 1.04e-07 1.47e-07 1.05e-07 1.21e-07 4.32e-08 3.8e-08 9.78e-08 7.55e-08 3.62e-08 6.14e-08 7.61e-08 6.42e-08 4.24e-08 6.28e-08 1.59e-07 5.27e-08 1.85e-08 3.34e-08 6.53e-09 9.96e-08 1.93e-09 4.94e-08
ENSG00000234329 AL604028.2 524329 3.62e-07 2.17e-07 5.14e-08 2.49e-07 1.01e-07 8.4e-08 4.05e-07 5.82e-08 1.59e-07 7.6e-08 1.86e-07 1.23e-07 3.18e-07 8.55e-08 6.12e-08 7.98e-08 5.73e-08 1.77e-07 7.16e-08 7.05e-08 1.22e-07 1.42e-07 2.11e-07 3.68e-08 2.86e-07 1.39e-07 1.29e-07 1.12e-07 1.6e-07 1.24e-07 1.22e-07 4.23e-08 4.27e-08 9.58e-08 1.07e-07 3.49e-08 5.76e-08 7.51e-08 6.28e-08 5.24e-08 5.04e-08 1.6e-07 4.76e-08 1.9e-08 3.71e-08 6.98e-09 8.81e-08 1.96e-09 4.67e-08
ENSG00000280670 CCDC163 676076 2.76e-07 1.36e-07 3.54e-08 2.05e-07 9.79e-08 9.91e-08 2.1e-07 5.43e-08 1.45e-07 4.94e-08 1.52e-07 8.68e-08 1.71e-07 7.37e-08 5.91e-08 7.3e-08 4.12e-08 1.27e-07 5.75e-08 4.8e-08 1.13e-07 1.28e-07 1.58e-07 2.93e-08 1.68e-07 1.21e-07 1.07e-07 9.65e-08 1.26e-07 1.03e-07 1.02e-07 2.96e-08 3.51e-08 8.11e-08 3.02e-08 3.96e-08 5.51e-08 8.61e-08 6.55e-08 3.86e-08 5.24e-08 1.33e-07 5.22e-08 1.14e-08 3.41e-08 1.92e-08 1.19e-07 3.79e-09 5e-08