Genes within 1Mb (chr1:46161710:C:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 670547 eQTL 1.66e-02 0.0942 0.0392 0.0 0.0 0.0368
ENSG00000086015 MAST2 374723 eQTL 1.73e-03 0.162 0.0517 0.0 0.0 0.0368
ENSG00000117448 AKR1A1 611167 eQTL 3.60e-02 -0.0623 0.0297 0.0 0.0 0.0368
ENSG00000117480 FAAH -232607 eQTL 2.31e-02 0.127 0.0558 0.0 0.0 0.0368
ENSG00000117481 NSUN4 -178467 eQTL 2.66e-08 0.354 0.0631 0.0 0.0 0.0368
ENSG00000132763 MMACHC 661410 eQTL 3.83e-02 -0.167 0.0804 0.0 0.0 0.0368
ENSG00000159588 CCDC17 537653 eQTL 5.28e-04 -0.129 0.0372 0.0 0.0 0.0368
ENSG00000159592 GPBP1L1 473597 eQTL 1.30e-02 0.07 0.0281 0.0 0.0 0.0368
ENSG00000186603 HPDL 834805 eQTL 2.91e-02 0.156 0.0715 0.00134 0.0 0.0368
ENSG00000197429 IPP 411060 eQTL 4.31e-02 -0.108 0.0534 0.0 0.0 0.0368
ENSG00000230896 AL604028.1 464635 eQTL 3.92e-02 -0.206 0.0995 0.0 0.0 0.0368


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000085998 \N -58595 7.7e-06 9.35e-06 1.37e-06 4.32e-06 2.27e-06 3.4e-06 9.59e-06 1.58e-06 6.66e-06 4.29e-06 1.04e-05 4.64e-06 1.21e-05 3.85e-06 2.18e-06 5.7e-06 3.8e-06 5.05e-06 2.66e-06 2.68e-06 3.97e-06 7.89e-06 6.81e-06 2.9e-06 1.16e-05 2.93e-06 4.39e-06 2.99e-06 7.82e-06 7.8e-06 4.51e-06 8.07e-07 1.09e-06 2.83e-06 3.09e-06 2.1e-06 1.57e-06 1.6e-06 1.57e-06 9.52e-07 8.6e-07 1.07e-05 8.97e-07 1.61e-07 7.67e-07 1.31e-06 9.07e-07 7.13e-07 5.97e-07
ENSG00000086015 MAST2 374723 8.85e-07 6.78e-07 1.02e-07 3.99e-07 9.29e-08 2.01e-07 5.9e-07 1.45e-07 4.61e-07 2.39e-07 8.15e-07 4.21e-07 9.57e-07 1.34e-07 2.35e-07 2.45e-07 3.69e-07 4.11e-07 2.17e-07 1.67e-07 1.92e-07 4.11e-07 4e-07 1.91e-07 7.94e-07 2.55e-07 2.71e-07 2.7e-07 3.99e-07 7.06e-07 3.56e-07 5.62e-08 4.55e-08 1.49e-07 3.04e-07 9.51e-08 1.06e-07 8.21e-08 6.72e-08 3.05e-08 8.02e-08 7.2e-07 2.8e-08 1.8e-08 1.48e-07 1.61e-08 8.84e-08 1.17e-08 5.15e-08
ENSG00000117448 AKR1A1 611167 3.07e-07 1.59e-07 5.72e-08 2.15e-07 1.03e-07 8.21e-08 2.1e-07 5.62e-08 1.54e-07 7.6e-08 1.61e-07 1.23e-07 2.24e-07 7.95e-08 5.69e-08 7.98e-08 4.31e-08 1.64e-07 7.18e-08 5.46e-08 1.27e-07 1.47e-07 1.58e-07 3.58e-08 1.85e-07 1.26e-07 1.17e-07 1.04e-07 1.34e-07 1.29e-07 1.14e-07 3.6e-08 3.21e-08 9.3e-08 2.97e-08 3.22e-08 5.35e-08 8.68e-08 6.28e-08 3.67e-08 5.33e-08 1.59e-07 5.39e-08 1.19e-08 3.32e-08 1.8e-08 9.96e-08 1.95e-09 4.8e-08
ENSG00000117481 NSUN4 -178467 1.93e-06 2.51e-06 2.53e-07 1.38e-06 4.89e-07 6.97e-07 1.29e-06 4.17e-07 1.77e-06 6.94e-07 1.84e-06 1.45e-06 3.2e-06 6.19e-07 4.38e-07 1.06e-06 1.05e-06 1.34e-06 5.76e-07 7.99e-07 6.18e-07 1.94e-06 1.78e-06 9.16e-07 2.65e-06 9.87e-07 1.04e-06 1.06e-06 1.63e-06 1.66e-06 9.62e-07 2.49e-07 3.7e-07 7.63e-07 8.33e-07 6.2e-07 6.89e-07 3.68e-07 5.97e-07 2.23e-07 3.5e-07 2.84e-06 3.44e-07 1.06e-07 3.6e-07 3.26e-07 2.9e-07 1.7e-07 2.32e-07
ENSG00000159588 CCDC17 537653 3.62e-07 2.3e-07 6.41e-08 2.28e-07 1.01e-07 7.75e-08 2.86e-07 5.84e-08 1.89e-07 1.03e-07 2.07e-07 1.59e-07 3.18e-07 8.15e-08 6.2e-08 9.48e-08 5.57e-08 2.15e-07 7.42e-08 6.29e-08 1.24e-07 1.89e-07 1.81e-07 3.27e-08 2.36e-07 1.51e-07 1.29e-07 1.28e-07 1.34e-07 1.81e-07 1.35e-07 4.77e-08 3.8e-08 9.52e-08 5.16e-08 3.18e-08 5.02e-08 8.17e-08 5.84e-08 6.07e-08 5.96e-08 2.19e-07 3.55e-08 1.44e-08 4e-08 8.31e-09 7.97e-08 2.13e-09 4.98e-08