Genes within 1Mb (chr1:46143284:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000086015 MAST2 356297 eQTL 2.07e-15 0.339 0.042 0.0 0.0 0.053
ENSG00000117448 AKR1A1 592741 eQTL 9.74e-04 -0.0818 0.0247 0.0 0.0 0.053
ENSG00000117480 FAAH -251033 eQTL 1.52e-03 0.148 0.0465 0.0 0.0 0.053
ENSG00000117481 NSUN4 -196893 eQTL 4.25e-06 0.245 0.0531 0.0 0.0 0.053
ENSG00000132773 TOE1 803232 eQTL 1.56e-02 -0.0705 0.0291 0.0 0.0 0.053
ENSG00000132780 NASP 559438 eQTL 1.95e-08 -0.198 0.035 0.0 0.0 0.053
ENSG00000159588 CCDC17 519227 eQTL 1.74e-24 -0.311 0.0296 0.0 0.0 0.053
ENSG00000159592 GPBP1L1 455171 eQTL 2.55e-02 0.0526 0.0235 0.0 0.0 0.053
ENSG00000197429 IPP 392634 eQTL 1.29e-02 -0.111 0.0446 0.0 0.0 0.053
ENSG00000225447 RPS15AP10 497087 eQTL 4.61e-02 -0.147 0.0735 0.0 0.0 0.053
ENSG00000230896 AL604028.1 446209 eQTL 9.74e-03 -0.215 0.0831 0.00143 0.0 0.053
ENSG00000232022 FAAHP1 -288845 eQTL 3.67e-02 -0.138 0.0658 0.0 0.0 0.053
ENSG00000281912 LINC01144 839374 eQTL 1.27e-05 0.322 0.0734 0.00875 0.00882 0.053


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000086015 MAST2 356297 1.11e-06 7.98e-07 1.24e-07 4.01e-07 9.93e-08 3.2e-07 6.54e-07 2e-07 6.03e-07 2.87e-07 1.02e-06 4.75e-07 1.05e-06 1.72e-07 3.15e-07 2.84e-07 5.55e-07 4.27e-07 2.65e-07 1.89e-07 2.51e-07 4.81e-07 4.08e-07 2.39e-07 1.36e-06 2.68e-07 4.25e-07 3.13e-07 5.41e-07 7.09e-07 3.68e-07 3.28e-08 4.83e-08 1.71e-07 3.16e-07 1.36e-07 1.4e-07 1.17e-07 7.54e-08 1.58e-08 1.47e-07 7.2e-07 5.51e-08 1.28e-08 1.94e-07 2.71e-08 1.37e-07 5.79e-08 6.03e-08
ENSG00000117448 AKR1A1 592741 3.1e-07 1.7e-07 6.26e-08 2.28e-07 1.1e-07 9.31e-08 2.24e-07 5.78e-08 1.66e-07 9.35e-08 1.69e-07 1.31e-07 2.38e-07 8.15e-08 5.62e-08 8.71e-08 4.63e-08 1.8e-07 7.16e-08 6.03e-08 1.18e-07 1.47e-07 1.64e-07 3.59e-08 2.36e-07 1.31e-07 1.23e-07 1.17e-07 1.37e-07 1.1e-07 1.21e-07 4.58e-08 3.74e-08 9.58e-08 7.44e-08 2.85e-08 4.47e-08 7.1e-08 6.5e-08 6.19e-08 5.04e-08 1.55e-07 3.99e-08 1.14e-08 3.66e-08 6.53e-09 7.12e-08 0.0 4.72e-08
ENSG00000117481 NSUN4 -196893 1.68e-06 2.09e-06 2.29e-07 1.44e-06 4.46e-07 7.18e-07 1.3e-06 3.78e-07 1.7e-06 7.18e-07 1.91e-06 1.3e-06 2.67e-06 7.09e-07 3.86e-07 9.68e-07 1.06e-06 1.18e-06 5.36e-07 5.44e-07 6.34e-07 1.88e-06 1.54e-06 6.79e-07 2.52e-06 7.8e-07 1.04e-06 9.59e-07 1.74e-06 1.47e-06 7.52e-07 2.43e-07 3.45e-07 5.66e-07 9.1e-07 5.32e-07 6.87e-07 3.3e-07 4.85e-07 2.05e-07 3.59e-07 2.23e-06 3.49e-07 1.99e-07 3.43e-07 3.04e-07 3.7e-07 2.23e-07 2.87e-07
ENSG00000132780 NASP 559438 3.53e-07 1.78e-07 6.55e-08 2.41e-07 1.06e-07 1.19e-07 2.63e-07 5.84e-08 1.85e-07 1.03e-07 1.96e-07 1.46e-07 2.55e-07 8.55e-08 6.27e-08 9.6e-08 5.57e-08 2.04e-07 7.36e-08 6.29e-08 1.23e-07 1.7e-07 1.75e-07 4.27e-08 2.74e-07 1.39e-07 1.25e-07 1.36e-07 1.34e-07 1.33e-07 1.22e-07 5.08e-08 4.16e-08 9.5e-08 1.16e-07 3.11e-08 5.26e-08 5.92e-08 6.33e-08 6.79e-08 4.68e-08 1.55e-07 3.25e-08 1.98e-08 4.91e-08 9.44e-09 7.8e-08 0.0 4.55e-08
ENSG00000159588 CCDC17 519227 4.21e-07 2.4e-07 6.57e-08 2.57e-07 1.11e-07 1.32e-07 3.25e-07 7.12e-08 1.98e-07 1.15e-07 2.38e-07 1.62e-07 3.48e-07 8.42e-08 7.35e-08 1.06e-07 8.42e-08 2.43e-07 7.53e-08 8.69e-08 1.39e-07 1.9e-07 1.86e-07 4.25e-08 3.41e-07 1.65e-07 1.39e-07 1.48e-07 1.47e-07 1.59e-07 1.39e-07 6.58e-08 4.76e-08 9.98e-08 1.69e-07 3.5e-08 5.62e-08 6e-08 5.69e-08 8.2e-08 3.24e-08 2e-07 3.65e-08 1.73e-08 6.59e-08 8.07e-09 8.94e-08 2.8e-09 4.52e-08
ENSG00000159592 GPBP1L1 455171 6.33e-07 3.55e-07 8.02e-08 3.58e-07 1.07e-07 1.74e-07 4.14e-07 8.86e-08 2.6e-07 1.65e-07 3.97e-07 2.33e-07 5.39e-07 1.01e-07 1.24e-07 1.46e-07 1.62e-07 2.96e-07 1.13e-07 8.11e-08 1.65e-07 2.45e-07 2.56e-07 1.03e-07 5.75e-07 2e-07 1.97e-07 1.86e-07 2.31e-07 2.59e-07 1.93e-07 7.79e-08 5.86e-08 1.18e-07 3.05e-07 5.14e-08 8.75e-08 7.66e-08 5.7e-08 6.07e-08 4.78e-08 2.91e-07 2.28e-08 2e-08 9.95e-08 1.35e-08 9.73e-08 1.11e-08 5.35e-08
ENSG00000281912 LINC01144 839374 2.74e-07 1.3e-07 4.08e-08 1.82e-07 9.79e-08 9.9e-08 1.53e-07 5.4e-08 1.44e-07 4.94e-08 1.57e-07 8.55e-08 1.45e-07 6.76e-08 6.02e-08 7.3e-08 3.93e-08 1.26e-07 5.82e-08 4.16e-08 1.13e-07 1.27e-07 1.39e-07 3.23e-08 1.5e-07 1.14e-07 1.07e-07 9.65e-08 1.09e-07 1.07e-07 9.64e-08 2.96e-08 3.61e-08 8.34e-08 4.84e-08 3.95e-08 5.04e-08 8.71e-08 6.55e-08 3.8e-08 5e-08 1.33e-07 5.24e-08 1.23e-08 3.84e-08 1.84e-08 1.22e-07 1.88e-09 5.04e-08