Genes within 1Mb (chr1:46135525:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 644362 eQTL 5.49e-15 -0.124 0.0155 0.0 0.0 0.287
ENSG00000086015 MAST2 348538 eQTL 5.20e-22 0.199 0.0202 0.0 0.0 0.287
ENSG00000117448 AKR1A1 584982 eQTL 1.16e-03 -0.0393 0.0121 0.00143 0.0 0.287
ENSG00000117461 PIK3R3 2489 eQTL 2.76e-24 0.215 0.0206 0.0 0.0 0.287
ENSG00000117480 FAAH -258792 eQTL 4.85e-02 0.045 0.0228 0.0 0.0 0.287
ENSG00000132128 LRRC41 -168083 eQTL 4.95e-02 -0.0362 0.0184 0.0 0.0 0.287
ENSG00000132780 NASP 551679 eQTL 1.66e-02 -0.0415 0.0173 0.0 0.0 0.287
ENSG00000142961 MOB3C -481366 eQTL 9.32e-04 -0.067 0.0202 0.0 0.0 0.287
ENSG00000159592 GPBP1L1 447412 eQTL 2.26e-05 0.0485 0.0114 0.00335 0.00302 0.287
ENSG00000159596 TMEM69 447344 eQTL 4.46e-03 0.067 0.0235 0.0 0.0 0.287
ENSG00000159658 EFCAB14 -583589 pQTL 3.05e-02 -0.0377 0.0174 0.0 0.0 0.281
ENSG00000159658 EFCAB14 -583589 eQTL 3.42e-03 -0.06 0.0204 0.0 0.0 0.287
ENSG00000162415 ZSWIM5 829316 eQTL 5.52e-02 0.0432 0.0225 0.00151 0.0 0.287
ENSG00000197429 IPP 384875 eQTL 1.75e-03 0.0682 0.0217 0.0 0.0 0.287
ENSG00000225447 RPS15AP10 489328 eQTL 3.66e-13 -0.258 0.035 0.0 0.0 0.287
ENSG00000234329 AL604028.2 483699 eQTL 3.76e-23 -0.258 0.0254 0.0 0.0 0.287
ENSG00000280670 CCDC163 635446 eQTL 7.82e-04 -0.134 0.0397 0.0 0.0 0.287


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 644362 2.77e-06 2.3e-06 2.59e-07 1.35e-06 3.73e-07 6.48e-07 1.27e-06 4.17e-07 1.74e-06 6.05e-07 2.09e-06 1.15e-06 2.73e-06 5.83e-07 4.03e-07 9.7e-07 1.05e-06 1.35e-06 5.54e-07 4.92e-07 6.39e-07 1.96e-06 1.35e-06 6.63e-07 2.41e-06 6.52e-07 1.06e-06 8.48e-07 1.7e-06 1.21e-06 8.3e-07 2.77e-07 3.01e-07 6.08e-07 5.93e-07 4.86e-07 6.89e-07 3.38e-07 4.78e-07 2.79e-07 1.67e-07 1.96e-06 4.01e-07 1.74e-07 1.73e-07 1.98e-07 2.29e-07 5.92e-08 1.47e-07
ENSG00000086015 MAST2 348538 5.62e-06 5.93e-06 7.29e-07 2.73e-06 1.08e-06 1.39e-06 4.6e-06 9.54e-07 4.55e-06 1.68e-06 4.14e-06 3.41e-06 7.51e-06 2.08e-06 1.35e-06 3.13e-06 2.36e-06 3.53e-06 1.43e-06 9.46e-07 2.9e-06 4.81e-06 3.64e-06 1.68e-06 6.75e-06 1.33e-06 2.35e-06 1.73e-06 4.17e-06 3.32e-06 2.32e-06 4.2e-07 7.75e-07 1.42e-06 2.08e-06 8.84e-07 9.05e-07 4.71e-07 1.23e-06 3.64e-07 2.87e-07 5.64e-06 8.57e-07 1.63e-07 2.97e-07 3.31e-07 8.74e-07 2e-07 1.59e-07
ENSG00000117448 AKR1A1 584982 3.24e-06 2.34e-06 3.17e-07 1.69e-06 4.65e-07 7.68e-07 1.36e-06 4.45e-07 1.71e-06 7.1e-07 1.91e-06 1.31e-06 2.79e-06 1.01e-06 4.36e-07 1.04e-06 1.06e-06 1.85e-06 7.09e-07 7.99e-07 8.12e-07 2.61e-06 1.68e-06 5.58e-07 2.59e-06 7.75e-07 1.01e-06 1.06e-06 1.75e-06 1.3e-06 7.32e-07 3.05e-07 3.35e-07 5.61e-07 8.35e-07 5.58e-07 7.27e-07 3.46e-07 5.37e-07 2.42e-07 2.19e-07 2.5e-06 4.2e-07 1.99e-07 2.11e-07 2.32e-07 2.09e-07 1.38e-07 1.93e-07
ENSG00000117461 PIK3R3 2489 6.53e-05 4.22e-05 7.01e-06 1.59e-05 6.22e-06 1.81e-05 5.58e-05 4.18e-06 3.47e-05 1.45e-05 4.51e-05 1.87e-05 5.64e-05 1.67e-05 7.14e-06 2.12e-05 2.12e-05 2.99e-05 8.6e-06 6.6e-06 1.81e-05 3.78e-05 4.04e-05 8.82e-06 4.91e-05 8.36e-06 1.49e-05 1.28e-05 4.16e-05 3.14e-05 2.3e-05 1.62e-06 2.31e-06 6.67e-06 1.26e-05 5.61e-06 2.73e-06 2.99e-06 4e-06 2.99e-06 1.66e-06 5.29e-05 4.82e-06 2.66e-07 2.77e-06 3.84e-06 4.08e-06 1.42e-06 1.53e-06
ENSG00000132128 LRRC41 -168083 1.05e-05 1.26e-05 1.35e-06 4.75e-06 2.22e-06 3.82e-06 1.06e-05 1.71e-06 7.75e-06 4.33e-06 9.41e-06 4.76e-06 1.31e-05 3.74e-06 2.36e-06 6.38e-06 5.57e-06 6.9e-06 2.47e-06 2.76e-06 4.67e-06 9.57e-06 6.91e-06 2.01e-06 1.39e-05 2.84e-06 4.46e-06 3.68e-06 9.36e-06 7.75e-06 4.72e-06 9.93e-07 9.52e-07 2.33e-06 3.56e-06 1.78e-06 1.43e-06 9.08e-07 1.42e-06 7.47e-07 5.7e-07 1.24e-05 1.54e-06 1.58e-07 7.75e-07 9.68e-07 9.05e-07 6.58e-07 5.92e-07
ENSG00000142961 MOB3C -481366 4.3e-06 4.13e-06 6.05e-07 1.89e-06 4.76e-07 7.74e-07 2.43e-06 6.72e-07 1.88e-06 8.15e-07 2.51e-06 1.41e-06 3.54e-06 1.44e-06 8.91e-07 1.7e-06 1.79e-06 2.17e-06 1.5e-06 1.35e-06 1.4e-06 3.54e-06 2.47e-06 9.49e-07 4.08e-06 1.2e-06 1.33e-06 1.77e-06 2.57e-06 1.66e-06 1.83e-06 4.71e-07 4.15e-07 9.68e-07 1.27e-06 8.65e-07 8.21e-07 3.84e-07 9.58e-07 1.88e-07 2.92e-07 3.41e-06 5.62e-07 1.89e-07 2.99e-07 3.29e-07 3.69e-07 2.44e-07 2.82e-07
ENSG00000159592 GPBP1L1 447412 4.54e-06 4.67e-06 7.79e-07 1.88e-06 5.96e-07 7.9e-07 2.41e-06 8.04e-07 2.28e-06 9.91e-07 2.57e-06 1.66e-06 4.26e-06 1.3e-06 9.09e-07 1.93e-06 2.02e-06 2.26e-06 1.49e-06 1.28e-06 1.73e-06 3.96e-06 2.75e-06 9.91e-07 4.54e-06 1.33e-06 1.47e-06 1.72e-06 3.19e-06 1.81e-06 2.01e-06 5.43e-07 5.05e-07 1.23e-06 1.54e-06 9.48e-07 9.25e-07 4.75e-07 1.21e-06 3.33e-07 3.03e-07 3.93e-06 6.47e-07 1.96e-07 3.65e-07 3.15e-07 4.17e-07 2.3e-07 2.24e-07
ENSG00000159658 EFCAB14 -583589 3.24e-06 2.37e-06 3.17e-07 1.69e-06 4.65e-07 7.87e-07 1.36e-06 4.17e-07 1.74e-06 6.9e-07 1.87e-06 1.31e-06 2.79e-06 1.01e-06 4.36e-07 1.04e-06 1.06e-06 1.92e-06 6.96e-07 7.99e-07 8.29e-07 2.67e-06 1.68e-06 5.3e-07 2.62e-06 7.75e-07 1.01e-06 1.07e-06 1.72e-06 1.3e-06 7.32e-07 3.21e-07 3.22e-07 5.61e-07 8.68e-07 5.46e-07 7.27e-07 3.46e-07 5.39e-07 2.42e-07 2.19e-07 2.5e-06 4.2e-07 1.99e-07 2.22e-07 2.32e-07 2.21e-07 1.49e-07 1.85e-07
ENSG00000162415 ZSWIM5 829316 1.4e-06 9.79e-07 2.24e-07 1.16e-06 2.69e-07 5.4e-07 1.63e-06 3.51e-07 1.15e-06 3.64e-07 1.39e-06 6.01e-07 1.83e-06 3.07e-07 4.77e-07 7e-07 9.33e-07 7.21e-07 8.83e-07 6.83e-07 6.81e-07 1.63e-06 9.28e-07 4.22e-07 1.95e-06 2.9e-07 6.85e-07 6.23e-07 1.24e-06 1.07e-06 5.48e-07 3e-07 1.76e-07 5.24e-07 4.36e-07 4.41e-07 5.93e-07 2.24e-07 1.96e-07 8.76e-08 8.48e-08 1.53e-06 5.42e-07 1.38e-07 1.91e-07 8.76e-08 1.43e-07 7.81e-08 6.58e-08
ENSG00000225447 RPS15AP10 489328 4.17e-06 3.92e-06 5.82e-07 1.97e-06 4.69e-07 7.5e-07 2.31e-06 6.48e-07 1.96e-06 7.7e-07 2.47e-06 1.34e-06 3.5e-06 1.42e-06 9.17e-07 1.62e-06 1.63e-06 2.15e-06 1.51e-06 1.3e-06 1.39e-06 3.36e-06 2.42e-06 8.71e-07 4.03e-06 1.21e-06 1.27e-06 1.78e-06 2.45e-06 1.66e-06 1.8e-06 4.54e-07 4.45e-07 9.24e-07 1.09e-06 7.45e-07 7.5e-07 4.12e-07 9.49e-07 2.03e-07 2.89e-07 3.32e-06 5.44e-07 1.89e-07 2.84e-07 2.98e-07 3.64e-07 2.53e-07 2.89e-07
ENSG00000234329 AL604028.2 483699 4.3e-06 4.1e-06 6.05e-07 1.93e-06 4.58e-07 8.08e-07 2.46e-06 6.87e-07 1.92e-06 8.08e-07 2.48e-06 1.42e-06 3.49e-06 1.41e-06 8.88e-07 1.63e-06 1.77e-06 2.15e-06 1.48e-06 1.36e-06 1.41e-06 3.51e-06 2.44e-06 8.95e-07 4.21e-06 1.22e-06 1.28e-06 1.8e-06 2.55e-06 1.65e-06 1.84e-06 4.71e-07 4.31e-07 9.49e-07 1.27e-06 7.8e-07 7.7e-07 4.29e-07 9.39e-07 1.71e-07 3.05e-07 3.49e-06 5.26e-07 1.89e-07 2.86e-07 3.14e-07 3.68e-07 2.43e-07 2.8e-07
ENSG00000280670 CCDC163 635446 2.66e-06 2.4e-06 2.31e-07 1.44e-06 3.55e-07 6.97e-07 1.32e-06 4.22e-07 1.72e-06 6.19e-07 2.06e-06 1.15e-06 2.67e-06 6.67e-07 3.96e-07 9.98e-07 9.51e-07 1.34e-06 5.75e-07 5.62e-07 6.35e-07 1.92e-06 1.4e-06 6.31e-07 2.41e-06 6.68e-07 1.04e-06 8.4e-07 1.67e-06 1.16e-06 8.43e-07 2.48e-07 2.64e-07 6.16e-07 6.29e-07 5.06e-07 6.79e-07 3.68e-07 4.57e-07 2.97e-07 1.8e-07 2.07e-06 4.01e-07 1.74e-07 1.67e-07 2.13e-07 2.41e-07 5.98e-08 1.68e-07