Genes within 1Mb (chr1:45968318:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 477155 eQTL 2.73e-17 0.132 0.0154 0.0 0.0 0.305
ENSG00000079277 MKNK1 -648525 eQTL 4.92e-02 0.0262 0.0133 0.0 0.0 0.305
ENSG00000086015 MAST2 181331 eQTL 1.12e-24 -0.21 0.0199 0.0 0.0 0.305
ENSG00000117448 AKR1A1 417775 eQTL 3.08e-02 0.026 0.012 0.0 0.0 0.305
ENSG00000117461 PIK3R3 -164718 eQTL 3.15e-28 -0.23 0.0202 0.0 0.0 0.305
ENSG00000117480 FAAH -425999 eQTL 4.33e-02 -0.0457 0.0226 0.0 0.0 0.305
ENSG00000123472 ATPAF1 -705549 eQTL 9.94e-03 0.0534 0.0207 0.0 0.0 0.305
ENSG00000132763 MMACHC 468018 eQTL 4.82e-02 0.0644 0.0326 0.0 0.0 0.305
ENSG00000142961 MOB3C -648573 eQTL 3.18e-04 0.0723 0.02 0.00111 0.0 0.305
ENSG00000159588 CCDC17 344261 eQTL 4.24e-02 -0.0307 0.0151 0.0 0.0 0.305
ENSG00000159592 GPBP1L1 280205 eQTL 2.72e-05 -0.0477 0.0113 0.00304 0.00255 0.305
ENSG00000159596 TMEM69 280137 eQTL 1.46e-12 -0.164 0.0228 0.0 0.0 0.305
ENSG00000159658 EFCAB14 -750796 pQTL 5.27e-03 0.0476 0.017 0.0 0.0 0.3
ENSG00000159658 EFCAB14 -750796 eQTL 3.29e-02 0.0435 0.0203 0.0 0.0 0.305
ENSG00000197429 IPP 217668 eQTL 3.78e-03 -0.0627 0.0216 0.0 0.0 0.305
ENSG00000225447 RPS15AP10 322121 eQTL 5.25e-14 0.265 0.0346 0.0 0.0 0.305
ENSG00000234329 AL604028.2 316492 eQTL 7.35e-33 0.305 0.0246 0.0 0.0 0.305
ENSG00000280670 CCDC163 468239 eQTL 7.41e-06 0.177 0.0392 0.0 0.0 0.305
ENSG00000281912 LINC01144 664408 eQTL 4.38e-02 -0.0724 0.0359 0.0 0.0 0.305


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 477155 5.59e-07 4.78e-07 8.55e-08 3.48e-07 1.05e-07 1.57e-07 4.25e-07 8.37e-08 3.03e-07 1.78e-07 4.74e-07 3.08e-07 5.54e-07 1.1e-07 1.48e-07 1.53e-07 1.38e-07 2.93e-07 1.55e-07 1.17e-07 1.68e-07 2.76e-07 2.67e-07 9.01e-08 5.75e-07 2.01e-07 1.87e-07 2.57e-07 2.31e-07 2.97e-07 2.43e-07 7.91e-08 5.48e-08 1.21e-07 2.61e-07 5.41e-08 1.03e-07 7.75e-08 4.17e-08 5.64e-08 4.78e-08 3.55e-07 3.19e-08 5.8e-09 8.43e-08 1.84e-08 1.03e-07 3.14e-09 4.66e-08
ENSG00000086015 MAST2 181331 2.14e-06 3.17e-06 2.32e-07 2.07e-06 4.74e-07 8.16e-07 1.85e-06 6.11e-07 1.92e-06 8.92e-07 2.49e-06 1.46e-06 3.5e-06 1.4e-06 8.59e-07 1.27e-06 1.15e-06 1.72e-06 7.93e-07 1.14e-06 9.45e-07 2.95e-06 2.16e-06 1e-06 3.96e-06 1.22e-06 1.28e-06 1.77e-06 2.02e-06 1.84e-06 1.81e-06 2.83e-07 4.71e-07 1.12e-06 1.27e-06 6.23e-07 8.1e-07 3.7e-07 9.58e-07 3.5e-07 3.05e-07 3.36e-06 3.74e-07 1.96e-07 3.89e-07 3.35e-07 4.97e-07 2.65e-07 2.62e-07
ENSG00000117448 AKR1A1 417775 7.87e-07 6.65e-07 1.02e-07 4.31e-07 9.45e-08 2.24e-07 5.76e-07 1.37e-07 5.06e-07 2.37e-07 8.15e-07 4.21e-07 8.37e-07 1.58e-07 2.57e-07 2.1e-07 3.35e-07 3.79e-07 2.42e-07 1.8e-07 2.05e-07 3.95e-07 3.69e-07 1.36e-07 9.26e-07 2.39e-07 2.72e-07 3.24e-07 3.86e-07 5.67e-07 3.56e-07 7.12e-08 5.55e-08 1.39e-07 3.38e-07 7.98e-08 8.6e-08 1.06e-07 6.74e-08 2.62e-08 1.01e-07 6.15e-07 2.75e-08 1.29e-08 1.14e-07 1.46e-08 1.11e-07 1.28e-08 5.44e-08
ENSG00000117461 PIK3R3 -164718 2.69e-06 3.77e-06 3.38e-07 1.96e-06 5.79e-07 8.37e-07 2.26e-06 7.56e-07 2.36e-06 1.19e-06 3.13e-06 1.84e-06 4.48e-06 1.25e-06 8.93e-07 1.66e-06 1.58e-06 2.24e-06 1.36e-06 1.51e-06 1.21e-06 3.21e-06 2.71e-06 1.05e-06 4.41e-06 1.35e-06 1.44e-06 1.73e-06 2.71e-06 2.37e-06 1.91e-06 2.5e-07 5.66e-07 1.22e-06 1.63e-06 8.73e-07 7.47e-07 4.21e-07 1.13e-06 3.79e-07 1.52e-07 4.04e-06 4.98e-07 1.6e-07 3.75e-07 3.88e-07 7.91e-07 2.41e-07 2.23e-07
ENSG00000142961 MOB3C -648573 2.95e-07 1.7e-07 6.04e-08 2.25e-07 9.82e-08 8.63e-08 2.16e-07 5.56e-08 1.71e-07 8.53e-08 1.69e-07 1.31e-07 2.24e-07 8.44e-08 5.62e-08 8.08e-08 4.31e-08 1.64e-07 7.39e-08 6.03e-08 1.18e-07 1.56e-07 1.58e-07 3.49e-08 2.17e-07 1.26e-07 1.19e-07 1.36e-07 1.31e-07 1.05e-07 1.26e-07 3.68e-08 4.37e-08 9.76e-08 3.97e-08 2.79e-08 4.62e-08 7.63e-08 6.45e-08 5.56e-08 4.36e-08 1.6e-07 5.27e-08 1.74e-08 3.4e-08 6.68e-09 8.61e-08 2.1e-09 4.83e-08
ENSG00000159592 GPBP1L1 280205 1.26e-06 1.07e-06 3.22e-07 1.15e-06 2.76e-07 5.26e-07 1.52e-06 3.51e-07 1.46e-06 4.36e-07 1.81e-06 7.04e-07 2.13e-06 2.92e-07 5.17e-07 8.25e-07 8.19e-07 5.36e-07 7.55e-07 6.55e-07 5.47e-07 1.38e-06 8.91e-07 6.1e-07 2.19e-06 3.91e-07 8.29e-07 8.04e-07 1.24e-06 1.27e-06 6.73e-07 7.24e-08 2.15e-07 5.18e-07 5.93e-07 4.12e-07 5.17e-07 2.15e-07 3.79e-07 2.55e-07 2.71e-07 1.49e-06 5.58e-08 1.3e-07 1.81e-07 1.25e-07 2.45e-07 8.93e-08 8.83e-08
ENSG00000159596 TMEM69 280137 1.26e-06 1.07e-06 3.22e-07 1.15e-06 2.76e-07 5.26e-07 1.52e-06 3.51e-07 1.46e-06 4.36e-07 1.81e-06 7.04e-07 2.13e-06 2.92e-07 5.31e-07 8.25e-07 8.19e-07 5.36e-07 7.55e-07 6.55e-07 5.47e-07 1.38e-06 8.91e-07 6.1e-07 2.19e-06 3.91e-07 8.29e-07 8.04e-07 1.24e-06 1.27e-06 6.73e-07 7.24e-08 2.15e-07 5.18e-07 5.93e-07 4.12e-07 5.17e-07 2.38e-07 3.79e-07 2.55e-07 2.71e-07 1.49e-06 5.58e-08 1.3e-07 1.81e-07 1.25e-07 2.37e-07 8.93e-08 8.83e-08
ENSG00000159658 EFCAB14 -750796 2.67e-07 1.33e-07 4.98e-08 2.05e-07 1.01e-07 9.05e-08 1.67e-07 5.53e-08 1.47e-07 6.08e-08 1.73e-07 1.08e-07 1.69e-07 7.95e-08 5.72e-08 7.5e-08 4.12e-08 1.4e-07 6.75e-08 4.95e-08 1.25e-07 1.25e-07 1.44e-07 2.79e-08 1.68e-07 1.25e-07 1.13e-07 1.04e-07 1.23e-07 9.49e-08 1.07e-07 3.59e-08 3.68e-08 8.23e-08 3.46e-08 3.14e-08 5.51e-08 9.03e-08 6.42e-08 3.75e-08 5.48e-08 1.46e-07 5.2e-08 1.53e-08 3.41e-08 1.68e-08 1.2e-07 1.92e-09 5.01e-08
ENSG00000225447 RPS15AP10 322121 1.2e-06 9.31e-07 2.41e-07 6.06e-07 1.78e-07 4.39e-07 1.02e-06 2.98e-07 1.1e-06 3.46e-07 1.35e-06 5.81e-07 1.58e-06 2.8e-07 4.12e-07 5.7e-07 7.72e-07 5.27e-07 4.24e-07 5.33e-07 3.07e-07 9.57e-07 6.93e-07 4.09e-07 1.94e-06 2.55e-07 6.38e-07 6.89e-07 8.47e-07 9.93e-07 5.47e-07 4.4e-08 1.76e-07 2.98e-07 4.2e-07 2.89e-07 3.81e-07 1.45e-07 1.73e-07 3.03e-08 2.18e-07 1.3e-06 6.68e-08 6.51e-08 1.89e-07 7.77e-08 1.78e-07 8.74e-08 5.81e-08
ENSG00000234329 AL604028.2 316492 1.25e-06 9.48e-07 2.81e-07 6.45e-07 1.77e-07 4.39e-07 1.08e-06 3.34e-07 1.14e-06 3.8e-07 1.38e-06 6.02e-07 1.65e-06 2.9e-07 4.32e-07 5.81e-07 7.73e-07 5.27e-07 4.65e-07 6.11e-07 3.35e-07 9.92e-07 7.15e-07 4.38e-07 1.95e-06 2.44e-07 6.37e-07 7.25e-07 8.81e-07 1.04e-06 5.79e-07 4.5e-08 1.82e-07 3.17e-07 3.98e-07 3.05e-07 3.67e-07 1.4e-07 1.96e-07 4.15e-08 2.45e-07 1.43e-06 6.87e-08 6.55e-08 1.82e-07 8.76e-08 1.76e-07 8.97e-08 5.47e-08
ENSG00000280670 CCDC163 468239 5.74e-07 4.93e-07 8.51e-08 3.57e-07 9.93e-08 1.71e-07 4.53e-07 9.07e-08 3.32e-07 1.89e-07 4.97e-07 3.21e-07 5.81e-07 1.17e-07 1.5e-07 1.61e-07 1.69e-07 2.96e-07 1.62e-07 1.28e-07 1.76e-07 2.96e-07 2.81e-07 1.03e-07 6.39e-07 2.13e-07 2.08e-07 2.68e-07 2.57e-07 3.39e-07 2.55e-07 8.25e-08 5.77e-08 1.18e-07 2.61e-07 5.2e-08 1.06e-07 7.66e-08 3.82e-08 5.8e-08 6.39e-08 3.85e-07 2.94e-08 5.89e-09 8.68e-08 1.95e-08 9.68e-08 3.25e-09 4.74e-08