Genes within 1Mb (chr1:45954469:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 463306 eQTL 2.43e-02 0.0695 0.0308 0.0 0.0 0.0594
ENSG00000086015 MAST2 167482 eQTL 5.68e-18 0.345 0.0392 0.0 0.0 0.0594
ENSG00000117448 AKR1A1 403926 eQTL 2.58e-04 -0.085 0.0232 0.0 0.0 0.0594
ENSG00000117461 PIK3R3 -178567 eQTL 3.95e-02 -0.086 0.0417 0.0 0.0 0.0594
ENSG00000117480 FAAH -439848 eQTL 1.65e-03 0.138 0.0437 0.0 0.0 0.0594
ENSG00000117481 NSUN4 -385708 eQTL 3.26e-04 0.181 0.05 0.0 0.0 0.0594
ENSG00000126088 UROD 943519 pQTL 1.45e-02 0.0752 0.0307 0.0 0.0 0.0578
ENSG00000132773 TOE1 614417 eQTL 6.71e-03 -0.0743 0.0273 0.0 0.0 0.0594
ENSG00000132780 NASP 370623 eQTL 2.64e-10 -0.209 0.0327 0.0 0.0 0.0594
ENSG00000159588 CCDC17 330412 eQTL 3.32e-31 -0.33 0.0274 0.0 0.0 0.0594
ENSG00000159592 GPBP1L1 266356 eQTL 1.03e-02 0.0567 0.0221 0.0 0.0 0.0594
ENSG00000162415 ZSWIM5 648260 eQTL 4.31e-02 -0.0878 0.0433 0.0 0.0 0.0594
ENSG00000197429 IPP 203819 eQTL 1.40e-02 -0.103 0.0419 0.0 0.0 0.0594
ENSG00000225447 RPS15AP10 308272 eQTL 1.17e-02 -0.174 0.069 0.0 0.0 0.0594
ENSG00000230896 AL604028.1 257394 eQTL 3.00e-02 -0.17 0.0781 0.0 0.0 0.0594
ENSG00000232022 FAAHP1 -477660 eQTL 3.90e-02 -0.128 0.0618 0.0 0.0 0.0594
ENSG00000281912 LINC01144 650559 eQTL 1.07e-04 0.269 0.0691 0.00246 0.00248 0.0594


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 463306 5.74e-07 2.98e-06 6.57e-08 4.36e-07 9.87e-08 7.75e-08 5.8e-07 2.68e-07 1.14e-06 3.05e-07 2.88e-06 1.45e-06 2e-06 1.4e-06 4.32e-07 1.1e-07 6.81e-08 3.74e-07 6.32e-08 4.78e-08 1.33e-07 6.91e-07 3.02e-07 3.17e-08 1.69e-06 1.14e-07 1.74e-07 4.94e-07 3.83e-07 2e-07 2.75e-06 3.89e-08 3.16e-08 1.23e-07 3.48e-07 3.04e-08 5.11e-08 9.35e-08 6.59e-08 4.19e-08 3.25e-08 1.5e-06 2.8e-08 0.0 3.83e-08 1.46e-08 1.25e-07 4.04e-09 4.77e-08
ENSG00000086015 MAST2 167482 1.65e-06 1.54e-05 2.59e-07 1.68e-06 1.77e-07 5.95e-07 2.16e-06 9.07e-07 4.92e-06 1.41e-06 1.42e-05 5.16e-06 7.51e-06 3.79e-06 1.25e-06 9.91e-07 1.1e-06 1.51e-06 3.77e-07 2.76e-07 7.95e-07 4.2e-06 1.76e-06 5.39e-07 4.66e-06 2.48e-07 1.04e-06 1.44e-06 2.07e-06 1.29e-06 1.15e-05 4.51e-08 5.37e-08 6.74e-07 9.04e-07 2.04e-07 1.06e-07 7.68e-08 1.83e-07 7.62e-08 5.44e-08 5.69e-06 3.68e-07 3.26e-08 2e-07 2.82e-07 8.21e-08 1.13e-08 4.66e-08
ENSG00000117448 AKR1A1 403926 8.15e-07 4.3e-06 7.6e-08 3.43e-07 9.82e-08 1.28e-07 7e-07 3.46e-07 1.38e-06 3.87e-07 4.29e-06 1.44e-06 2.46e-06 1.49e-06 5.5e-07 1.53e-07 1.17e-07 4.39e-07 7.09e-08 5.2e-08 1.59e-07 1.17e-06 3.84e-07 3.42e-08 1.95e-06 1.26e-07 2.43e-07 7.22e-07 5.42e-07 3.39e-07 2.72e-06 3.68e-08 3.89e-08 1.21e-07 3.6e-07 3.22e-08 5.29e-08 9.44e-08 6.76e-08 3.99e-08 3.84e-08 1.63e-06 4.65e-08 0.0 2.82e-08 4.38e-08 1.25e-07 3.89e-09 5.04e-08
ENSG00000117481 NSUN4 -385708 8.63e-07 4.67e-06 7.87e-08 3.6e-07 1.02e-07 1.32e-07 7.44e-07 3.51e-07 1.46e-06 3.71e-07 4.33e-06 1.66e-06 2.53e-06 1.82e-06 5.4e-07 1.76e-07 1.62e-07 4.16e-07 7.39e-08 5.46e-08 1.57e-07 1.27e-06 4.13e-07 3.68e-08 2.01e-06 1.22e-07 2.56e-07 7.81e-07 6.19e-07 4.27e-07 3.37e-06 4.1e-08 4.02e-08 1.23e-07 3.28e-07 2.68e-08 5.3e-08 9.49e-08 6.28e-08 5.13e-08 3.7e-08 1.64e-06 5.58e-08 0.0 3.29e-08 5.38e-08 1.26e-07 3.83e-09 5.04e-08
ENSG00000132773 TOE1 614417 3.02e-07 1.34e-06 4.91e-08 3.19e-07 9.01e-08 9.9e-08 3.33e-07 1.03e-07 4.43e-07 2.01e-07 1.97e-06 6.16e-07 1.05e-06 4.66e-07 2.81e-07 7.74e-08 4.31e-08 2.66e-07 5.36e-08 4.07e-08 1.25e-07 3.13e-07 1.69e-07 3.68e-08 7.71e-07 1.19e-07 1.17e-07 2.44e-07 1.48e-07 1.03e-07 1.84e-06 3.72e-08 2.74e-08 9.3e-08 1.54e-07 3.76e-08 4.72e-08 9.06e-08 7.63e-08 3.18e-08 4.02e-08 7.45e-07 3.13e-08 0.0 5.87e-08 8.07e-09 1.35e-07 4.41e-09 4.61e-08
ENSG00000132780 NASP 370623 9.14e-07 4.77e-06 8.51e-08 4.15e-07 1.05e-07 1.54e-07 8.7e-07 3.44e-07 1.49e-06 4.11e-07 4.9e-06 1.84e-06 2.73e-06 2.15e-06 5.42e-07 1.96e-07 2.07e-07 4.72e-07 7.36e-08 5.48e-08 1.76e-07 1.38e-06 4.06e-07 4.27e-08 2.1e-06 1.26e-07 2.72e-07 7.08e-07 6.84e-07 4.72e-07 3.52e-06 4.03e-08 3.73e-08 1.36e-07 3.18e-07 2.85e-08 5.7e-08 9.6e-08 6.62e-08 5.56e-08 3.51e-08 1.8e-06 5.91e-08 0.0 3.55e-08 7.16e-08 1.22e-07 3.8e-09 4.79e-08
ENSG00000159588 CCDC17 330412 1.21e-06 5.16e-06 1.05e-07 6.75e-07 1.06e-07 1.74e-07 1.16e-06 4.04e-07 1.74e-06 5.19e-07 6.03e-06 3.04e-06 2.84e-06 2.03e-06 4.58e-07 2.69e-07 3.52e-07 5.33e-07 7.76e-08 6.16e-08 1.92e-07 1.81e-06 5.87e-07 4.34e-08 2.31e-06 1.39e-07 4.27e-07 9.25e-07 8.97e-07 6.81e-07 4.38e-06 3.94e-08 3.21e-08 1.5e-07 3.96e-07 3.3e-08 5.51e-08 9.65e-08 5.69e-08 7.17e-08 3.91e-08 2.17e-06 6.81e-08 0.0 3.61e-08 9.94e-08 1.24e-07 1.88e-09 4.85e-08
ENSG00000159592 GPBP1L1 266356 1.29e-06 9.31e-06 1.57e-07 1.2e-06 1.07e-07 3.15e-07 1.48e-06 3.9e-07 1.63e-06 7.18e-07 8.87e-06 3.29e-06 3.5e-06 2.19e-06 4.72e-07 4.84e-07 6.83e-07 6.25e-07 1.55e-07 7.29e-08 2.43e-07 1.96e-06 9.21e-07 1.21e-07 2.44e-06 1.9e-07 6.16e-07 1.05e-06 1.38e-06 9.49e-07 5.93e-06 3.68e-08 4.74e-08 2.1e-07 5.65e-07 5.14e-08 5.02e-08 9.26e-08 4.04e-08 5.88e-08 4.69e-08 3.06e-06 6.65e-08 0.0 8.06e-08 1.46e-07 1.22e-07 2.02e-09 5.02e-08
ENSG00000230896 AL604028.1 257394 1.33e-06 9.23e-06 1.59e-07 1.26e-06 1.13e-07 3.39e-07 1.49e-06 4.75e-07 1.72e-06 7.2e-07 8.95e-06 3.31e-06 3.68e-06 2.59e-06 4.99e-07 5.7e-07 7.79e-07 6.8e-07 1.69e-07 8.39e-08 2.26e-07 2.02e-06 8.91e-07 1.27e-07 2.51e-06 2e-07 6.19e-07 1.1e-06 1.47e-06 1.01e-06 6.4e-06 3.06e-08 4.76e-08 2.19e-07 5.93e-07 5.41e-08 5.26e-08 9.36e-08 3.82e-08 5.12e-08 4.57e-08 3.26e-06 5.89e-08 0.0 8.45e-08 1.72e-07 1.18e-07 2.1e-09 5e-08
ENSG00000234329 \N 302643 1.25e-06 6.7e-06 1.27e-07 9.83e-07 1.11e-07 2.16e-07 1.47e-06 4.34e-07 1.7e-06 5.86e-07 7.19e-06 3.37e-06 3.33e-06 1.76e-06 3.98e-07 3.35e-07 5.06e-07 5.66e-07 9.69e-08 8e-08 2.35e-07 1.97e-06 7.16e-07 7.22e-08 2.41e-06 1.65e-07 4.97e-07 8.69e-07 1.17e-06 8.4e-07 4.95e-06 4.09e-08 3.65e-08 1.75e-07 4.2e-07 4.6e-08 4.06e-08 9.22e-08 4.9e-08 8.03e-08 4.36e-08 2.77e-06 7.53e-08 0.0 4.99e-08 1.29e-07 1.19e-07 1.91e-09 4.94e-08
ENSG00000281912 LINC01144 650559 2.91e-07 1.13e-06 4.48e-08 2.66e-07 8.83e-08 9.8e-08 2.86e-07 9.07e-08 3.66e-07 1.6e-07 2.1e-06 6.19e-07 9.44e-07 3.31e-07 2.14e-07 7.5e-08 4.12e-08 2.33e-07 5.21e-08 4.2e-08 1.22e-07 2.7e-07 1.58e-07 4.05e-08 6.59e-07 1.19e-07 1.12e-07 1.97e-07 1.34e-07 9.49e-08 1.31e-06 3.52e-08 2.74e-08 9.81e-08 1.22e-07 3.77e-08 4.79e-08 8.78e-08 8e-08 3e-08 3.46e-08 7.2e-07 3.4e-08 0.0 6.38e-08 9.65e-09 1.37e-07 4.5e-09 4.61e-08