Genes within 1Mb (chr1:45942662:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 451499 eQTL 2.26e-02 0.0704 0.0308 0.0 0.0 0.0594
ENSG00000086015 MAST2 155675 eQTL 6.49e-18 0.345 0.0392 0.0 0.0 0.0594
ENSG00000117448 AKR1A1 392119 eQTL 2.36e-04 -0.0855 0.0232 0.0 0.0 0.0594
ENSG00000117461 PIK3R3 -190374 eQTL 3.76e-02 -0.0868 0.0417 0.0 0.0 0.0594
ENSG00000117480 FAAH -451655 eQTL 1.69e-03 0.138 0.0437 0.0 0.0 0.0594
ENSG00000117481 NSUN4 -397515 eQTL 3.06e-04 0.181 0.05 0.0 0.0 0.0594
ENSG00000126088 UROD 931712 pQTL 1.54e-02 0.0745 0.0307 0.0 0.0 0.0578
ENSG00000132773 TOE1 602610 eQTL 6.63e-03 -0.0743 0.0273 0.0 0.0 0.0594
ENSG00000132780 NASP 358816 eQTL 2.76e-10 -0.209 0.0327 0.0 0.0 0.0594
ENSG00000159588 CCDC17 318605 eQTL 3.39e-31 -0.33 0.0274 0.0 0.0 0.0594
ENSG00000159592 GPBP1L1 254549 eQTL 1.04e-02 0.0566 0.0221 0.0 0.0 0.0594
ENSG00000162415 ZSWIM5 636453 eQTL 4.40e-02 -0.0874 0.0433 0.0 0.0 0.0594
ENSG00000197429 IPP 192012 eQTL 1.39e-02 -0.103 0.0419 0.0 0.0 0.0594
ENSG00000225447 RPS15AP10 296465 eQTL 1.22e-02 -0.173 0.069 0.0 0.0 0.0594
ENSG00000230896 AL604028.1 245587 eQTL 2.91e-02 -0.171 0.0781 0.0 0.0 0.0594
ENSG00000232022 FAAHP1 -489467 eQTL 3.80e-02 -0.128 0.0618 0.0 0.0 0.0594
ENSG00000281912 LINC01144 638752 eQTL 1.16e-04 0.267 0.0691 0.00221 0.00226 0.0594


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 451499 6.97e-07 3.55e-07 6.57e-08 3.58e-07 1.07e-07 1.57e-07 4.14e-07 7.52e-08 2.81e-07 1.5e-07 4.13e-07 2.33e-07 5.39e-07 1.49e-07 1.45e-07 1.17e-07 8.42e-08 3.02e-07 1.97e-07 1.3e-07 1.76e-07 2.45e-07 2.48e-07 1.03e-07 5.53e-07 1.86e-07 1.72e-07 2.18e-07 1.87e-07 4.61e-07 2.31e-07 4.29e-08 5.38e-08 1.23e-07 1.76e-07 5.05e-08 9.11e-08 6.56e-08 5.77e-08 8.61e-08 5.1e-08 2.71e-07 2.8e-08 1.11e-08 7.89e-08 1.81e-08 9.07e-08 2.23e-09 4.68e-08
ENSG00000086015 MAST2 155675 4.19e-06 4.89e-06 5.96e-07 2.41e-06 8.79e-07 1.05e-06 2.84e-06 7.94e-07 4.09e-06 1.6e-06 4.22e-06 2.87e-06 6.66e-06 2.11e-06 1.26e-06 2e-06 1.63e-06 2.34e-06 1.37e-06 9.54e-07 1.93e-06 3.87e-06 3.36e-06 1.84e-06 5.16e-06 1.17e-06 1.57e-06 1.48e-06 3.88e-06 3.94e-06 2.25e-06 3.45e-07 5.69e-07 1.35e-06 1.8e-06 9.4e-07 9.55e-07 4.71e-07 1.32e-06 3.46e-07 3.05e-07 4.34e-06 3.78e-07 1.68e-07 3.27e-07 3.54e-07 8.36e-07 2.23e-07 2.12e-07
ENSG00000117448 AKR1A1 392119 9.47e-07 6.42e-07 8.83e-08 4.39e-07 9.29e-08 2.46e-07 5.82e-07 9.91e-08 5.3e-07 2.28e-07 8.08e-07 3.84e-07 8.6e-07 2.1e-07 2.77e-07 2e-07 2.07e-07 3.95e-07 2.92e-07 1.89e-07 2.35e-07 3.87e-07 3.7e-07 1.76e-07 9.71e-07 2.36e-07 2.52e-07 3.24e-07 3.43e-07 7.63e-07 3.68e-07 8.14e-08 5.63e-08 1.36e-07 3.36e-07 7.86e-08 8.6e-08 9.58e-08 6.33e-08 5.61e-08 3.68e-08 4.55e-07 5.09e-08 1.27e-08 1.16e-07 1.48e-08 9.98e-08 2.71e-09 5.49e-08
ENSG00000117481 NSUN4 -397515 9.14e-07 6.04e-07 8.51e-08 4.4e-07 9.26e-08 2.24e-07 5.65e-07 9.78e-08 5.02e-07 2.26e-07 7.44e-07 3.62e-07 8.34e-07 1.97e-07 2.48e-07 1.96e-07 1.73e-07 3.95e-07 2.88e-07 1.97e-07 2.17e-07 3.76e-07 3.3e-07 1.71e-07 9.15e-07 2.33e-07 2.52e-07 2.98e-07 3.27e-07 7.42e-07 3.67e-07 7.91e-08 5.47e-08 1.36e-07 3.01e-07 8.17e-08 8.35e-08 9.33e-08 6.63e-08 6.05e-08 4.07e-08 4.35e-07 5.58e-08 1.25e-08 1.17e-07 1.44e-08 9.68e-08 0.0 4.82e-08
ENSG00000132773 TOE1 602610 3.14e-07 1.53e-07 5.14e-08 2.27e-07 1.03e-07 8.37e-08 2.1e-07 5.66e-08 1.59e-07 6.75e-08 1.61e-07 1.2e-07 2.05e-07 8.66e-08 5.69e-08 7.74e-08 4.24e-08 1.64e-07 7.27e-08 6.02e-08 1.18e-07 1.39e-07 1.58e-07 3.49e-08 2.02e-07 1.26e-07 1.12e-07 1.26e-07 1.26e-07 1.36e-07 1.21e-07 2.99e-08 3.74e-08 9.3e-08 3.12e-08 3.22e-08 3.91e-08 8.51e-08 6.39e-08 3.75e-08 4.94e-08 1.48e-07 3.19e-08 2e-08 3.07e-08 8.31e-09 1.2e-07 1.88e-09 5e-08
ENSG00000132780 NASP 358816 1.25e-06 8.47e-07 9.89e-08 3.17e-07 1.07e-07 3.39e-07 6.52e-07 1.45e-07 7.15e-07 2.81e-07 1.07e-06 5.15e-07 1.07e-06 2.57e-07 3.56e-07 2.89e-07 3.63e-07 4.39e-07 3.98e-07 3.54e-07 2.43e-07 5.2e-07 3.99e-07 2.68e-07 1.42e-06 2.6e-07 3.37e-07 4.23e-07 4.39e-07 9.21e-07 4.47e-07 7.5e-08 6.78e-08 1.73e-07 3.7e-07 1.44e-07 1.83e-07 1.21e-07 8.43e-08 2.74e-08 4.4e-08 6.8e-07 6.81e-08 2.66e-08 1.61e-07 4.23e-08 1.11e-07 3.25e-09 5.54e-08
ENSG00000159588 CCDC17 318605 1.3e-06 9.37e-07 1.6e-07 6.35e-07 1.54e-07 4.12e-07 9.74e-07 2.21e-07 1.12e-06 2.67e-07 1.26e-06 5.68e-07 1.55e-06 2.88e-07 4.41e-07 4.11e-07 6.15e-07 5.53e-07 5.88e-07 6.26e-07 3.35e-07 7.21e-07 6.18e-07 4.55e-07 1.92e-06 2.34e-07 5.04e-07 5.8e-07 6.85e-07 1.18e-06 5.26e-07 5.88e-08 1.7e-07 2.72e-07 3e-07 2.54e-07 3.62e-07 1.59e-07 1.33e-07 8.8e-09 8.68e-08 1.05e-06 5.58e-08 6.41e-08 1.91e-07 7.64e-08 1.19e-07 1.79e-08 6.15e-08
ENSG00000159592 GPBP1L1 254549 1.34e-06 1.29e-06 3.29e-07 1.27e-06 3.5e-07 6.02e-07 1.48e-06 3.37e-07 1.66e-06 5.19e-07 2.03e-06 8.67e-07 2.55e-06 5.86e-07 4.95e-07 8.79e-07 8.49e-07 8.55e-07 5.9e-07 4.77e-07 8.02e-07 1.72e-06 8.89e-07 5.61e-07 2.41e-06 4.17e-07 9.02e-07 8.92e-07 1.31e-06 1.29e-06 8.22e-07 9.48e-08 2.54e-07 6.74e-07 5.25e-07 4.81e-07 7.3e-07 2.71e-07 4.8e-07 2.65e-07 1.98e-07 1.65e-06 2.9e-07 1.33e-07 1.69e-07 1.99e-07 2.34e-07 8.35e-08 8.38e-08
ENSG00000230896 AL604028.1 245587 1.41e-06 1.52e-06 3.28e-07 1.22e-06 3.73e-07 6.27e-07 1.51e-06 3.68e-07 1.73e-06 5.99e-07 2.08e-06 9.21e-07 2.63e-06 8.7e-07 4.58e-07 9.27e-07 8.94e-07 1.02e-06 5.59e-07 4.65e-07 7.6e-07 1.82e-06 1.05e-06 5.3e-07 2.34e-06 6.16e-07 9.29e-07 8.4e-07 1.48e-06 1.36e-06 8.49e-07 1.55e-07 2.66e-07 6.83e-07 5.31e-07 4.49e-07 6.89e-07 2.95e-07 4.89e-07 2.91e-07 2.18e-07 1.64e-06 3.55e-07 1.65e-07 2.16e-07 2.32e-07 2.27e-07 8.89e-08 8.28e-08
ENSG00000234329 \N 290836 1.27e-06 9.73e-07 2.62e-07 1.02e-06 2.48e-07 4.9e-07 1.24e-06 2.84e-07 1.35e-06 3.66e-07 1.39e-06 6.03e-07 1.99e-06 2.95e-07 5.08e-07 6.22e-07 7.73e-07 5.47e-07 8.18e-07 6.97e-07 4.77e-07 1.17e-06 8.1e-07 5.79e-07 2.11e-06 3.02e-07 6.13e-07 7.01e-07 9.65e-07 1.31e-06 6.76e-07 4.34e-08 2.43e-07 4.51e-07 4.22e-07 3.36e-07 4.79e-07 1.57e-07 2.92e-07 4.15e-08 1.01e-07 1.43e-06 9.6e-08 9.66e-08 1.64e-07 1.17e-07 1.73e-07 3.21e-08 5.26e-08
ENSG00000281912 LINC01144 638752 2.95e-07 1.33e-07 4.48e-08 2.24e-07 9.87e-08 8.21e-08 1.81e-07 5.53e-08 1.5e-07 6.08e-08 1.59e-07 1.11e-07 1.79e-07 8.15e-08 5.69e-08 7.5e-08 4.09e-08 1.51e-07 7.29e-08 5.87e-08 1.22e-07 1.25e-07 1.5e-07 2.68e-08 1.85e-07 1.21e-07 1.13e-07 1.1e-07 1.22e-07 1.17e-07 1.09e-07 3.08e-08 3.38e-08 8.89e-08 3.81e-08 3.05e-08 4.62e-08 9.03e-08 6.76e-08 4.55e-08 5.13e-08 1.46e-07 4.17e-08 1.14e-08 3.41e-08 1.71e-08 1.21e-07 3.79e-09 5.02e-08