Genes within 1Mb (chr1:45918933:G:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 427770 eQTL 5.44e-03 -0.0479 0.0172 0.0 0.0 0.269
ENSG00000086015 MAST2 131946 eQTL 2.45e-05 0.0957 0.0226 0.0 0.0 0.269
ENSG00000117448 AKR1A1 368390 eQTL 3.38e-02 -0.0277 0.013 0.0 0.0 0.269
ENSG00000117461 PIK3R3 -214103 eQTL 5.64e-09 0.135 0.0229 0.0 0.0 0.269
ENSG00000117481 NSUN4 -421244 eQTL 6.95e-04 -0.0952 0.028 0.0 0.0 0.269
ENSG00000123472 ATPAF1 -754934 eQTL 3.95e-03 -0.0646 0.0224 0.00134 0.0 0.269
ENSG00000126088 UROD 907983 pQTL 9.84e-08 -0.0884 0.0165 0.0 0.0 0.277
ENSG00000126088 UROD 907983 eQTL 1.20e-08 -0.136 0.0236 0.0 0.0 0.269
ENSG00000142961 MOB3C -697958 eQTL 4.73e-02 -0.0433 0.0218 0.0 0.0 0.269
ENSG00000162415 ZSWIM5 612724 eQTL 4.65e-03 0.0685 0.0242 0.0 0.0 0.269
ENSG00000225447 RPS15AP10 272736 eQTL 1.18e-02 -0.0972 0.0385 0.0 0.0 0.269
ENSG00000234329 AL604028.2 267107 eQTL 7.82e-07 -0.141 0.0284 0.0 0.0 0.269
ENSG00000280670 CCDC163 418854 eQTL 7.22e-03 -0.115 0.0428 0.0 0.0 0.269


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117450 \N 395886 1.27e-06 9.53e-07 2.77e-07 6.42e-07 2.98e-07 4.82e-07 1.24e-06 3.27e-07 1.38e-06 4.28e-07 1.39e-06 6.08e-07 1.95e-06 2.9e-07 5.79e-07 8.25e-07 8.4e-07 5.76e-07 5.29e-07 4.68e-07 4.39e-07 1.17e-06 7.79e-07 6.1e-07 1.88e-06 3.91e-07 6.7e-07 7.74e-07 9.65e-07 1.04e-06 5.62e-07 3.05e-07 1.95e-07 4.57e-07 3.42e-07 3.59e-07 4.21e-07 1.5e-07 1.71e-07 4.17e-08 1.22e-07 1.57e-06 2.48e-07 9.69e-08 1.86e-07 8.76e-08 2.3e-07 8.25e-08 1.04e-07
ENSG00000117461 PIK3R3 -214103 4.36e-06 4.67e-06 5.33e-07 1.99e-06 8.58e-07 1.01e-06 2.62e-06 1.01e-06 4.15e-06 1.94e-06 4.34e-06 2.55e-06 5.97e-06 1.37e-06 1.26e-06 2.42e-06 1.59e-06 2.37e-06 1.53e-06 1.39e-06 1.98e-06 3.96e-06 3.44e-06 1.64e-06 4.72e-06 1.29e-06 1.86e-06 1.43e-06 3.55e-06 2.5e-06 2.01e-06 4.91e-07 6.01e-07 1.33e-06 1.45e-06 9.47e-07 9.08e-07 4.5e-07 1.34e-06 4.35e-07 3.03e-07 4.75e-06 4.2e-07 1.82e-07 3.64e-07 3.59e-07 8.3e-07 2.22e-07 1.94e-07
ENSG00000126088 UROD 907983 2.95e-07 1.33e-07 5.64e-08 2.05e-07 1.03e-07 9.05e-08 1.73e-07 5.53e-08 1.5e-07 6.4e-08 1.73e-07 1.11e-07 1.71e-07 7.64e-08 5.72e-08 7.74e-08 4.24e-08 1.51e-07 6.75e-08 4.89e-08 1.26e-07 1.26e-07 1.44e-07 2.68e-08 1.65e-07 1.23e-07 1.13e-07 1.04e-07 1.23e-07 1.05e-07 1.06e-07 4.58e-08 3.51e-08 8.89e-08 6.67e-08 2.95e-08 5.65e-08 8.76e-08 6.71e-08 4.55e-08 5.13e-08 1.46e-07 3.02e-08 1.43e-08 2.82e-08 1.77e-08 1.15e-07 1.95e-09 4.81e-08
ENSG00000142961 MOB3C -697958 4.89e-07 2.5e-07 6.41e-08 2.53e-07 1.05e-07 1.13e-07 3.11e-07 5.84e-08 2.12e-07 1.28e-07 2.38e-07 1.82e-07 3.48e-07 8.42e-08 8.45e-08 1.14e-07 6.63e-08 2.66e-07 7.76e-08 6.73e-08 1.39e-07 1.9e-07 1.81e-07 4.91e-08 2.86e-07 1.86e-07 1.33e-07 1.52e-07 1.36e-07 1.39e-07 1.39e-07 7.12e-08 4.97e-08 9.81e-08 4.78e-08 4.77e-08 5.45e-08 6.66e-08 5.8e-08 6.92e-08 5.71e-08 2.19e-07 2.75e-08 1.79e-08 5.84e-08 1.01e-08 9.07e-08 0.0 4.68e-08
ENSG00000162415 ZSWIM5 612724 7.74e-07 4.24e-07 8.67e-08 3.19e-07 1.07e-07 1.57e-07 4.25e-07 7.79e-08 3.17e-07 1.89e-07 4.13e-07 2.8e-07 5.39e-07 1.01e-07 1.48e-07 1.75e-07 1.35e-07 3.3e-07 1.36e-07 7.29e-08 1.57e-07 2.48e-07 2.48e-07 1.17e-07 4.67e-07 2.32e-07 1.83e-07 1.95e-07 2.03e-07 2.19e-07 1.93e-07 5.3e-08 5.75e-08 1.27e-07 1.07e-07 5.7e-08 8.07e-08 6.31e-08 5.89e-08 7.65e-08 5.04e-08 3.43e-07 5.44e-08 1.05e-08 9.95e-08 1.3e-08 9.68e-08 3.35e-09 5.54e-08
ENSG00000234329 AL604028.2 267107 2.77e-06 2.63e-06 2.73e-07 1.69e-06 4.62e-07 8.18e-07 1.59e-06 5.72e-07 1.92e-06 9.48e-07 2.46e-06 1.26e-06 3.58e-06 1.23e-06 8.18e-07 1.52e-06 1.04e-06 2.04e-06 6.7e-07 7.4e-07 9.29e-07 2.61e-06 1.82e-06 9.38e-07 3.25e-06 1.3e-06 1.18e-06 1.63e-06 1.69e-06 1.59e-06 1.38e-06 4.17e-07 3.94e-07 8.18e-07 8.23e-07 6.22e-07 7.35e-07 3.25e-07 6.03e-07 2.29e-07 3.03e-07 3.26e-06 5.42e-07 1.95e-07 3.49e-07 3.17e-07 4.97e-07 2.34e-07 2.31e-07