Genes within 1Mb (chr1:45911296:ATCT:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 420133 eQTL 2.82e-02 0.068 0.0309 0.0 0.0 0.0589
ENSG00000086015 MAST2 124309 eQTL 5.11e-18 0.347 0.0393 0.0 0.0 0.0589
ENSG00000117448 AKR1A1 360753 eQTL 1.65e-04 -0.088 0.0233 0.00102 0.00144 0.0589
ENSG00000117461 PIK3R3 -221740 eQTL 4.22e-02 -0.0852 0.0419 0.0 0.0 0.0589
ENSG00000117480 FAAH -483021 eQTL 2.23e-03 0.135 0.0439 0.0 0.0 0.0589
ENSG00000117481 NSUN4 -428881 eQTL 6.51e-04 0.172 0.0503 0.0 0.0 0.0589
ENSG00000126088 UROD 900346 pQTL 1.32e-02 0.0764 0.0308 0.0 0.0 0.0574
ENSG00000132773 TOE1 571244 eQTL 8.46e-03 -0.0724 0.0274 0.0 0.0 0.0589
ENSG00000132780 NASP 327450 eQTL 1.90e-10 -0.211 0.0328 0.00109 0.0 0.0589
ENSG00000159588 CCDC17 287239 eQTL 3.10e-31 -0.331 0.0275 0.0 0.0 0.0589
ENSG00000159592 GPBP1L1 223183 eQTL 9.09e-03 0.0579 0.0221 0.0 0.0 0.0589
ENSG00000162415 ZSWIM5 605087 eQTL 4.72e-02 -0.0864 0.0435 0.0 0.0 0.0589
ENSG00000197429 IPP 160646 eQTL 1.40e-02 -0.104 0.0421 0.0 0.0 0.0589
ENSG00000225447 RPS15AP10 265099 eQTL 1.26e-02 -0.173 0.0692 0.0 0.0 0.0589
ENSG00000230896 AL604028.1 214221 eQTL 2.53e-02 -0.176 0.0784 0.00103 0.0 0.0589
ENSG00000232022 FAAHP1 -520833 eQTL 3.32e-02 -0.132 0.062 0.0 0.0 0.0589
ENSG00000281912 LINC01144 607386 eQTL 1.29e-04 0.267 0.0694 0.002 0.00204 0.0589


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 420133 5.87e-06 3.3e-05 1.23e-06 3.38e-06 1.3e-06 1.05e-06 8.18e-06 5.98e-07 4.8e-06 2.01e-06 8.05e-06 4.41e-06 9.39e-06 4e-06 1.21e-06 3.84e-06 1.92e-06 3.85e-06 1.36e-06 1.4e-06 2.75e-06 5.5e-06 5.31e-06 1.6e-06 5.89e-06 1.74e-06 2.66e-06 2.66e-06 4.47e-06 3.08e-06 3.68e-06 2.38e-07 5.29e-07 1.77e-06 2.05e-06 1.11e-06 9.08e-07 3.79e-07 9.49e-07 3.63e-07 2.8e-07 1.76e-05 1.38e-06 1.79e-07 3.13e-07 5.88e-07 8.74e-07 3.77e-08 1.7e-07
ENSG00000086015 MAST2 124309 2.26e-05 0.000132 6.78e-06 1.17e-05 2.4e-06 4.22e-06 2.03e-05 2.18e-06 1.65e-05 7.19e-06 2.31e-05 2.24e-05 3.06e-05 1.15e-05 5.11e-06 9.06e-06 8.09e-06 1.19e-05 2.58e-06 2.62e-06 6.84e-06 1.76e-05 1.74e-05 4.94e-06 2.61e-05 4.45e-06 7.95e-06 7.68e-06 1.59e-05 7.87e-06 1.28e-05 9.42e-07 7.03e-07 3.37e-06 9.06e-06 2.81e-06 1.83e-06 1.93e-06 1.84e-06 3.28e-06 8.85e-07 2.78e-05 3.68e-06 1.61e-07 8.22e-07 2.32e-06 1.76e-06 7.14e-07 5.64e-07
ENSG00000117448 AKR1A1 360753 7.62e-06 4.52e-05 1.51e-06 3.83e-06 1.61e-06 1.55e-06 9.34e-06 8.5e-07 5.33e-06 2.67e-06 9.71e-06 5.35e-06 1.11e-05 3.66e-06 1.86e-06 4.5e-06 2.84e-06 3.74e-06 1.43e-06 8.96e-07 2.55e-06 7.51e-06 6.69e-06 1.84e-06 8.16e-06 1.94e-06 2.23e-06 3.6e-06 6.07e-06 3.95e-06 4.49e-06 2.82e-07 6.63e-07 1.55e-06 2.3e-06 1.29e-06 9.46e-07 5.11e-07 1.33e-06 4.56e-07 3.03e-07 1.89e-05 1.68e-06 1.59e-07 3.98e-07 1.18e-06 7.91e-07 1.97e-07 2.75e-07
ENSG00000117481 NSUN4 -428881 5.72e-06 3.14e-05 1.34e-06 3.08e-06 1.38e-06 9.7e-07 8.05e-06 5.85e-07 4.83e-06 1.94e-06 7.9e-06 3.9e-06 9.25e-06 3.8e-06 1.06e-06 3.81e-06 1.84e-06 3.83e-06 1.38e-06 1.33e-06 2.77e-06 5.45e-06 5.05e-06 1.65e-06 5.39e-06 1.67e-06 2.61e-06 2.43e-06 4.42e-06 2.93e-06 3.5e-06 2.06e-07 4.15e-07 1.7e-06 2.09e-06 9.86e-07 9.07e-07 4.24e-07 8.54e-07 3.27e-07 3.03e-07 1.73e-05 1.39e-06 1.8e-07 3.05e-07 5.34e-07 8.55e-07 3.7e-08 1.47e-07
ENSG00000132773 TOE1 571244 4.27e-06 1.43e-05 6.91e-07 2.02e-06 6.39e-07 8.16e-07 4.27e-06 3.69e-07 3.07e-06 8.46e-07 4.69e-06 3.54e-06 7.02e-06 1.79e-06 1.33e-06 2e-06 1.56e-06 2.38e-06 1.29e-06 5.08e-07 1.93e-06 3.87e-06 3.78e-06 9.38e-07 3.96e-06 1.09e-06 1.31e-06 1.85e-06 3.77e-06 1.79e-06 2.72e-06 3.31e-08 3e-07 1.2e-06 1.61e-06 9.09e-07 6.81e-07 3.59e-07 4.78e-07 2.58e-07 1.2e-07 1.29e-05 6.7e-07 1.99e-07 1.81e-07 3.28e-07 4.03e-07 3.84e-08 6.03e-08
ENSG00000132780 NASP 327450 8.53e-06 5.45e-05 2.18e-06 4.07e-06 1.71e-06 1.7e-06 9.67e-06 9.79e-07 6.39e-06 2.84e-06 1.05e-05 6.02e-06 1.16e-05 3.95e-06 2.18e-06 4.99e-06 3.61e-06 3.77e-06 1.55e-06 1e-06 3.12e-06 7.6e-06 6.98e-06 2.01e-06 8.97e-06 2.13e-06 3.09e-06 4.25e-06 6.77e-06 4.12e-06 5.04e-06 3.04e-07 7.34e-07 1.93e-06 3.01e-06 1.61e-06 1.07e-06 4.08e-07 1.32e-06 5.64e-07 1.67e-07 1.97e-05 2.34e-06 1.53e-07 2.99e-07 1.08e-06 9.47e-07 2.3e-07 2.68e-07
ENSG00000159588 CCDC17 287239 1.04e-05 6.76e-05 2.44e-06 5.05e-06 1.47e-06 1.53e-06 1.01e-05 9.78e-07 8.41e-06 3.58e-06 1.23e-05 6.86e-06 1.36e-05 4.48e-06 2.83e-06 5.83e-06 3.77e-06 4.46e-06 1.45e-06 1.28e-06 3.64e-06 8.85e-06 8e-06 2.85e-06 1.06e-05 2.4e-06 4.07e-06 4.89e-06 7.52e-06 4.47e-06 5.96e-06 4.71e-07 6.12e-07 2.53e-06 4.27e-06 2.11e-06 1.13e-06 5e-07 1.06e-06 9.09e-07 2.66e-07 2.05e-05 2.63e-06 1.66e-07 3.34e-07 1.02e-06 1.13e-06 1.98e-07 1.89e-07
ENSG00000159592 GPBP1L1 223183 1.42e-05 9.39e-05 4.04e-06 7.37e-06 1.85e-06 2.6e-06 1.19e-05 1.28e-06 1.05e-05 5.11e-06 1.6e-05 9.95e-06 1.86e-05 6.73e-06 3.8e-06 6.62e-06 4.93e-06 7.37e-06 1.9e-06 1.76e-06 4.96e-06 1.1e-05 1.11e-05 3.4e-06 1.48e-05 3.49e-06 5.26e-06 5.64e-06 1.09e-05 6.65e-06 8.36e-06 3.85e-07 7.14e-07 2.93e-06 5.85e-06 2.66e-06 1.63e-06 1.46e-06 9.61e-07 1.23e-06 6.37e-07 2.31e-05 2.98e-06 1.6e-07 6.36e-07 1.75e-06 8.82e-07 4.1e-07 3.03e-07
ENSG00000230896 AL604028.1 214221 1.48e-05 9.98e-05 4.29e-06 7.79e-06 1.89e-06 2.81e-06 1.25e-05 1.34e-06 1.06e-05 5.03e-06 1.68e-05 1.08e-05 2e-05 7.21e-06 3.97e-06 6.67e-06 5.17e-06 7.74e-06 2.1e-06 1.98e-06 5.16e-06 1.18e-05 1.19e-05 3.47e-06 1.58e-05 3.81e-06 5.85e-06 5.97e-06 1.13e-05 7.05e-06 8.7e-06 4.34e-07 7.24e-07 2.96e-06 6.13e-06 2.62e-06 1.71e-06 1.53e-06 1.05e-06 1.42e-06 6.91e-07 2.34e-05 2.99e-06 1.6e-07 8.03e-07 1.8e-06 8.96e-07 4.11e-07 3.52e-07
ENSG00000234329 \N 259470 1.2e-05 7.78e-05 3.02e-06 6.11e-06 1.73e-06 1.68e-06 1.06e-05 1.18e-06 9.59e-06 4.35e-06 1.38e-05 7.98e-06 1.56e-05 5.14e-06 3.33e-06 6.37e-06 3.89e-06 5.78e-06 1.58e-06 1.47e-06 4.51e-06 9.92e-06 9.43e-06 3.36e-06 1.24e-05 2.79e-06 4.51e-06 5.26e-06 8.58e-06 5.27e-06 6.76e-06 5.76e-07 5.23e-07 2.75e-06 4.89e-06 2.22e-06 1.33e-06 6.48e-07 8.29e-07 1.01e-06 4.26e-07 2.15e-05 2.67e-06 1.52e-07 3.74e-07 1.42e-06 1.03e-06 2.22e-07 1.58e-07
ENSG00000281912 LINC01144 607386 4e-06 1.26e-05 9.35e-07 1.94e-06 4.72e-07 7.75e-07 3.65e-06 3.51e-07 2.53e-06 7.3e-07 4.16e-06 3.11e-06 6.46e-06 1.94e-06 1.44e-06 2.08e-06 1.63e-06 2.09e-06 9.86e-07 6.56e-07 1.81e-06 3.51e-06 3.4e-06 9.49e-07 3.5e-06 1.36e-06 1.17e-06 1.72e-06 3.45e-06 1.64e-06 2.13e-06 5.35e-08 1.89e-07 1.26e-06 1.27e-06 1.03e-06 7.42e-07 2.97e-07 5.03e-07 1.85e-07 1.01e-07 1.28e-05 6.29e-07 1.74e-07 1.92e-07 3.31e-07 3.2e-07 2.41e-08 6.46e-08