Genes within 1Mb (chr1:45875967:G:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 384804 eQTL 3.46e-12 0.138 0.0196 0.0 0.0 0.163
ENSG00000086015 MAST2 88980 eQTL 2.00e-19 -0.234 0.0254 0.0 0.0 0.163
ENSG00000117461 PIK3R3 -257069 eQTL 4.35e-14 -0.203 0.0264 0.0 0.0 0.163
ENSG00000117480 FAAH -518350 eQTL 3.88e-02 -0.059 0.0285 0.0 0.0 0.163
ENSG00000126088 UROD 865017 pQTL 6.67e-05 0.0775 0.0194 0.0 0.0 0.165
ENSG00000126088 UROD 865017 eQTL 1.96e-03 0.0866 0.0279 0.0 0.0 0.163
ENSG00000142961 MOB3C -740924 eQTL 3.80e-03 0.0735 0.0253 0.0 0.0 0.163
ENSG00000159592 GPBP1L1 187854 eQTL 5.21e-03 -0.0402 0.0144 0.0 0.0 0.163
ENSG00000159658 EFCAB14 -843147 eQTL 6.76e-03 0.0696 0.0256 0.0 0.0 0.163
ENSG00000162415 ZSWIM5 569758 eQTL 5.80e-02 -0.0536 0.0282 0.00138 0.0 0.163
ENSG00000197429 IPP 125317 eQTL 1.00e-02 -0.0704 0.0273 0.0 0.0 0.163
ENSG00000225447 RPS15AP10 229770 eQTL 4.33e-10 0.278 0.0441 0.0 0.0 0.163
ENSG00000234329 AL604028.2 224141 eQTL 5.46e-17 0.275 0.0323 0.0 0.0 0.163
ENSG00000280670 CCDC163 375888 eQTL 1.42e-04 -0.19 0.0497 0.0029 0.00102 0.163


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 384804 1.04e-06 8.69e-07 2.15e-07 4.32e-07 9.86e-08 1.85e-07 6.33e-07 8.37e-08 4.61e-07 2.12e-07 9e-07 4.94e-07 1.1e-06 2.09e-07 3.86e-07 2.36e-07 6.98e-07 4.24e-07 2.87e-07 1.91e-07 1.92e-07 3.95e-07 4.12e-07 3.06e-07 1.36e-06 2.4e-07 2.52e-07 2.13e-07 3.99e-07 9.58e-07 3.81e-07 5.99e-08 8.37e-08 1.9e-07 3.36e-07 2.54e-07 3.65e-07 8.15e-08 8.52e-08 2.65e-08 3.43e-08 5.09e-07 1.37e-07 1.29e-08 1.17e-07 1.55e-08 9.84e-08 3.13e-08 5.61e-08
ENSG00000086015 MAST2 88980 6.57e-06 9.59e-06 1.13e-06 4.32e-06 1.62e-06 2.55e-06 9.36e-06 1.15e-06 5.2e-06 2.76e-06 8.06e-06 3.84e-06 1.16e-05 3.79e-06 1.21e-06 4.09e-06 3.74e-06 3.67e-06 2.25e-06 2.63e-06 2.55e-06 6.7e-06 5.57e-06 2.14e-06 1.06e-05 2.1e-06 2.34e-06 1.55e-06 6.35e-06 7.8e-06 4.1e-06 4.31e-07 8.4e-07 2.26e-06 2.5e-06 1.84e-06 1.38e-06 9.68e-07 1.37e-06 9.09e-07 6.17e-07 8.26e-06 1.26e-06 1.56e-07 4.86e-07 9.77e-07 9.92e-07 6.72e-07 4.68e-07
ENSG00000117450 \N 352920 1.27e-06 9.35e-07 2.93e-07 3.2e-07 1.09e-07 2.64e-07 7.96e-07 1.21e-07 6.62e-07 2.57e-07 1.08e-06 5.51e-07 1.48e-06 2.72e-07 4.49e-07 3.41e-07 7.7e-07 4.52e-07 3.95e-07 3.42e-07 2.48e-07 5.37e-07 4.96e-07 4.38e-07 1.72e-06 2.68e-07 3.1e-07 2.63e-07 5.42e-07 1.21e-06 4.55e-07 5.71e-08 1.49e-07 2.77e-07 3.71e-07 3.16e-07 5.32e-07 1.06e-07 1.6e-07 1.63e-08 5.56e-08 7.04e-07 3.32e-07 2.71e-08 1.48e-07 4.38e-08 7.25e-08 8.08e-08 5.19e-08
ENSG00000117461 PIK3R3 -257069 1.29e-06 1.92e-06 2.93e-07 1.3e-06 3.09e-07 5.15e-07 1.48e-06 3.25e-07 1.49e-06 3.99e-07 1.83e-06 8.77e-07 2.6e-06 4.76e-07 4.96e-07 8.25e-07 1.06e-06 7.36e-07 7.08e-07 4.38e-07 6.36e-07 1.63e-06 8.89e-07 5.81e-07 2.35e-06 4.36e-07 7.33e-07 7.25e-07 1.38e-06 1.61e-06 8.17e-07 1.59e-07 3.24e-07 6.24e-07 5.85e-07 5.32e-07 7.55e-07 2.4e-07 4.41e-07 3.15e-07 2.37e-07 1.49e-06 5.79e-07 1.32e-07 1.86e-07 1.48e-07 1.8e-07 4.88e-08 8.28e-08
ENSG00000142961 MOB3C -740924 2.74e-07 1.27e-07 5.03e-08 1.82e-07 9.25e-08 9.61e-08 1.61e-07 5.33e-08 1.44e-07 4.57e-08 1.54e-07 9.19e-08 1.69e-07 7.95e-08 5.98e-08 7.3e-08 4.12e-08 1.27e-07 5.97e-08 4.23e-08 1.04e-07 1.28e-07 1.44e-07 2.91e-08 1.63e-07 1.16e-07 1.08e-07 9.32e-08 1.09e-07 1.05e-07 1.02e-07 3.64e-08 3.96e-08 8.56e-08 8.21e-08 3.14e-08 5.35e-08 9.22e-08 6.57e-08 3.77e-08 3.95e-08 1.33e-07 3.08e-08 1.09e-08 5.19e-08 1.86e-08 1.23e-07 1.9e-09 4.85e-08
ENSG00000159592 GPBP1L1 187854 2.66e-06 3.7e-06 6.46e-07 2.01e-06 4.87e-07 7.77e-07 1.86e-06 3.94e-07 1.72e-06 7.15e-07 1.97e-06 1.33e-06 3.69e-06 1.39e-06 9.32e-07 1.2e-06 1.56e-06 1.73e-06 1.15e-06 1.52e-06 7.87e-07 2.25e-06 2.15e-06 9.91e-07 3.89e-06 1.06e-06 1e-06 1.1e-06 1.8e-06 2.93e-06 1.75e-06 2.84e-07 6.22e-07 1.22e-06 9.45e-07 1.03e-06 9.39e-07 4.1e-07 1.09e-06 3.57e-07 2.58e-07 2.89e-06 4.02e-07 1.9e-07 3.15e-07 2.95e-07 2.41e-07 2.34e-07 2.71e-07
ENSG00000159658 EFCAB14 -843147 2.67e-07 1.19e-07 4.08e-08 1.82e-07 9.01e-08 9.57e-08 1.44e-07 5.49e-08 1.4e-07 4.4e-08 1.6e-07 8.59e-08 1.45e-07 7.13e-08 6.02e-08 7.26e-08 3.87e-08 1.18e-07 5.39e-08 4.45e-08 1.04e-07 1.26e-07 1.32e-07 3.42e-08 1.4e-07 1.19e-07 1.12e-07 8.71e-08 1.05e-07 1.07e-07 9.64e-08 3.94e-08 3.16e-08 8.34e-08 8.82e-08 3.62e-08 5.29e-08 9.55e-08 6.54e-08 3.18e-08 4.76e-08 1.35e-07 5.27e-08 1.22e-08 5.87e-08 1.83e-08 1.26e-07 3.79e-09 4.79e-08
ENSG00000162415 ZSWIM5 569758 3.27e-07 1.83e-07 6.41e-08 2.26e-07 9.94e-08 8.33e-08 2.63e-07 5.48e-08 1.59e-07 6.75e-08 1.83e-07 1.48e-07 3.18e-07 8.85e-08 7.98e-08 8.08e-08 7.3e-08 1.91e-07 7.27e-08 5.61e-08 1.27e-07 1.56e-07 1.68e-07 3.27e-08 2.74e-07 1.22e-07 1.17e-07 1.01e-07 1.32e-07 2.26e-07 1.27e-07 3.72e-08 4.27e-08 1.01e-07 3.71e-08 4.68e-08 7.52e-08 8.89e-08 5.59e-08 4.41e-08 4.92e-08 1.52e-07 4.18e-08 2.06e-08 3.07e-08 6.83e-09 1.18e-07 0.0 4.99e-08
ENSG00000225447 RPS15AP10 229770 1.64e-06 2.61e-06 3.29e-07 1.28e-06 3.58e-07 6.17e-07 1.24e-06 3.62e-07 1.74e-06 5.19e-07 2.05e-06 1.28e-06 2.84e-06 8.74e-07 3.84e-07 9.51e-07 9.63e-07 1.14e-06 5.51e-07 7.4e-07 7.79e-07 1.91e-06 1.33e-06 8.52e-07 2.65e-06 6.9e-07 9.18e-07 7.99e-07 1.6e-06 1.86e-06 7.35e-07 2.56e-07 4e-07 5.55e-07 5.64e-07 6.23e-07 7.76e-07 3.63e-07 4.94e-07 1.86e-07 3.02e-07 1.67e-06 4.63e-07 1.74e-07 1.9e-07 2.32e-07 2.22e-07 1.43e-07 1.36e-07
ENSG00000234329 AL604028.2 224141 1.63e-06 2.6e-06 3e-07 1.43e-06 3.91e-07 6.3e-07 1.31e-06 3.98e-07 1.75e-06 6.23e-07 2.02e-06 1.29e-06 2.98e-06 9.7e-07 4.38e-07 9.54e-07 1.1e-06 1.09e-06 5.54e-07 7.92e-07 7.86e-07 1.93e-06 1.42e-06 1.02e-06 2.63e-06 7.64e-07 9.55e-07 8.64e-07 1.63e-06 1.84e-06 7.56e-07 3.01e-07 4.59e-07 5.83e-07 5.91e-07 6.66e-07 7.8e-07 3.48e-07 5.97e-07 2.22e-07 2.57e-07 1.88e-06 4.65e-07 1.75e-07 2.25e-07 2.88e-07 2.3e-07 1.69e-07 1.69e-07