Genes within 1Mb (chr1:45869980:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000070759 TESK2 378817 eQTL 5.51e-18 0.135 0.0153 0.0 0.0 0.307
ENSG00000079277 MKNK1 -746863 eQTL 4.42e-02 0.0267 0.0133 0.0 0.0 0.307
ENSG00000086015 MAST2 82993 eQTL 2.66e-25 -0.212 0.0198 0.0013 0.0 0.307
ENSG00000117448 AKR1A1 319437 eQTL 3.68e-02 0.025 0.012 0.0 0.0 0.307
ENSG00000117461 PIK3R3 -263056 eQTL 1.68e-27 -0.227 0.0202 0.0 0.0 0.307
ENSG00000117480 FAAH -524337 eQTL 3.62e-02 -0.0472 0.0225 0.0 0.0 0.307
ENSG00000123472 ATPAF1 -803887 eQTL 9.49e-03 0.0535 0.0206 0.0 0.0 0.307
ENSG00000132763 MMACHC 369680 eQTL 4.82e-02 0.0642 0.0325 0.0 0.0 0.307
ENSG00000142961 MOB3C -746911 eQTL 1.38e-04 0.0763 0.0199 0.00157 0.0 0.307
ENSG00000159588 CCDC17 245923 eQTL 3.59e-02 -0.0317 0.0151 0.0 0.0 0.307
ENSG00000159592 GPBP1L1 181867 eQTL 4.36e-05 -0.0463 0.0113 0.00201 0.00169 0.307
ENSG00000159596 TMEM69 181799 eQTL 8.54e-13 -0.165 0.0228 0.0 0.0 0.307
ENSG00000159658 EFCAB14 -849134 pQTL 3.73e-03 0.0493 0.017 0.0 0.0 0.303
ENSG00000159658 EFCAB14 -849134 eQTL 2.68e-02 0.045 0.0203 0.0 0.0 0.307
ENSG00000197429 IPP 119330 eQTL 3.89e-03 -0.0623 0.0215 0.0 0.0 0.307
ENSG00000225447 RPS15AP10 223783 eQTL 1.52e-14 0.269 0.0345 0.0 0.0 0.307
ENSG00000234329 AL604028.2 218154 eQTL 3.97e-34 0.31 0.0244 0.0 0.0 0.307
ENSG00000280670 CCDC163 369901 eQTL 7.88e-06 0.176 0.0391 0.0 0.0 0.307
ENSG00000281912 LINC01144 566070 eQTL 4.13e-02 -0.073 0.0357 0.0 0.0 0.307


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000070759 TESK2 378817 1.26e-06 8.81e-07 3.03e-07 3.16e-07 2.05e-07 3.3e-07 8.7e-07 3.33e-07 1.11e-06 3.46e-07 1.22e-06 5.82e-07 1.37e-06 2.19e-07 4.37e-07 6e-07 7.66e-07 5.66e-07 3.56e-07 4.32e-07 2.83e-07 8.66e-07 6.26e-07 4.59e-07 1.53e-06 2.98e-07 6.16e-07 4.96e-07 8.4e-07 9.22e-07 4.59e-07 3.86e-08 1.48e-07 3.49e-07 3.4e-07 3.16e-07 2.57e-07 1.24e-07 1.55e-07 4.07e-08 2.32e-07 1.09e-06 6.53e-08 1.04e-08 1.69e-07 7.03e-08 1.8e-07 8.74e-08 9.13e-08
ENSG00000086015 MAST2 82993 7.03e-06 7.81e-06 1.3e-06 3.85e-06 2.21e-06 2.7e-06 9.53e-06 1.71e-06 6.17e-06 4.19e-06 8.9e-06 4.23e-06 1.13e-05 3.13e-06 1.7e-06 5.65e-06 3.71e-06 4.76e-06 2.58e-06 2.59e-06 4.21e-06 7.46e-06 6.38e-06 3.08e-06 9.94e-06 3.09e-06 4.36e-06 2.73e-06 7.44e-06 7.71e-06 4.1e-06 8.78e-07 1.22e-06 2.94e-06 2.89e-06 2.22e-06 1.65e-06 1.57e-06 1.61e-06 1.02e-06 9.83e-07 8.07e-06 1.04e-06 1.61e-07 7.7e-07 1.32e-06 1.12e-06 7.55e-07 4.27e-07
ENSG00000117448 AKR1A1 319437 1.24e-06 9.83e-07 3.12e-07 6.45e-07 3.46e-07 4.73e-07 1.38e-06 3.82e-07 1.39e-06 4.52e-07 1.52e-06 6.45e-07 1.99e-06 2.55e-07 5.35e-07 9.17e-07 8.25e-07 6.91e-07 7.52e-07 6.55e-07 5.66e-07 1.45e-06 8.89e-07 6.4e-07 1.96e-06 4.39e-07 8.75e-07 7.01e-07 1.29e-06 1.25e-06 6.18e-07 1.91e-07 2.16e-07 6.95e-07 5.36e-07 4.37e-07 4.73e-07 1.7e-07 3.25e-07 2.93e-07 2.68e-07 1.53e-06 8.26e-08 1.27e-08 1.79e-07 1.3e-07 2.36e-07 7e-08 1.58e-07
ENSG00000117461 PIK3R3 -263056 1.55e-06 1.36e-06 2.19e-07 1.27e-06 4.22e-07 6.27e-07 1.44e-06 3.78e-07 1.75e-06 6.94e-07 2.05e-06 1.13e-06 2.56e-06 3.31e-07 4.05e-07 9.68e-07 1.02e-06 1.09e-06 5.84e-07 5.06e-07 7.61e-07 1.98e-06 1.19e-06 6.61e-07 2.49e-06 8.08e-07 9.97e-07 8.4e-07 1.71e-06 1.31e-06 8.2e-07 2.43e-07 3.22e-07 5.48e-07 6.11e-07 5.58e-07 6.69e-07 3.23e-07 5.07e-07 1.86e-07 3.57e-07 1.8e-06 3.32e-07 5.72e-08 3.71e-07 2.29e-07 3.01e-07 1.43e-07 2.62e-07
ENSG00000142961 MOB3C -746911 3.53e-07 1.51e-07 6.55e-08 2.09e-07 1.01e-07 8.89e-08 2.16e-07 5.84e-08 1.75e-07 1.03e-07 1.76e-07 1.48e-07 2.24e-07 8.07e-08 6.12e-08 9.6e-08 4.63e-08 1.91e-07 7.39e-08 5.87e-08 1.18e-07 1.7e-07 1.68e-07 3.59e-08 2.02e-07 1.43e-07 1.23e-07 1.17e-07 1.37e-07 1.24e-07 1.26e-07 4.4e-08 3.46e-08 9.81e-08 3.36e-08 3.11e-08 4.62e-08 8.37e-08 6.39e-08 5.56e-08 5.96e-08 1.55e-07 3.55e-08 1.16e-08 3.55e-08 1.01e-08 7.83e-08 2.05e-09 4.98e-08
ENSG00000159592 GPBP1L1 181867 3.61e-06 2.75e-06 5.97e-07 1.96e-06 7.88e-07 7.74e-07 2.28e-06 9.05e-07 2.38e-06 1.24e-06 2.61e-06 1.74e-06 3.75e-06 1.4e-06 9.02e-07 2.1e-06 1.57e-06 2.16e-06 1.57e-06 1.21e-06 1.45e-06 3.41e-06 2.62e-06 1.62e-06 3.74e-06 1.25e-06 1.53e-06 1.84e-06 2.91e-06 2.23e-06 2.08e-06 4.71e-07 6.64e-07 1.34e-06 1.51e-06 9.67e-07 9.22e-07 4.2e-07 1.27e-06 3.46e-07 2.78e-07 3.38e-06 5.79e-07 2.15e-07 3.5e-07 3.42e-07 8.56e-07 2.63e-07 2.55e-07
ENSG00000159596 TMEM69 181799 3.61e-06 2.75e-06 5.97e-07 1.96e-06 7.73e-07 7.74e-07 2.28e-06 9.05e-07 2.38e-06 1.24e-06 2.61e-06 1.74e-06 3.75e-06 1.4e-06 9.02e-07 2.1e-06 1.57e-06 2.16e-06 1.57e-06 1.21e-06 1.45e-06 3.41e-06 2.58e-06 1.62e-06 3.8e-06 1.25e-06 1.53e-06 1.84e-06 2.91e-06 2.23e-06 2.08e-06 4.71e-07 6.64e-07 1.34e-06 1.51e-06 9.67e-07 9.22e-07 4.2e-07 1.27e-06 3.46e-07 2.78e-07 3.38e-06 5.79e-07 2.15e-07 3.5e-07 3.42e-07 8.56e-07 2.63e-07 2.55e-07
ENSG00000159658 EFCAB14 -849134 3.02e-07 1.36e-07 5.82e-08 1.9e-07 1.03e-07 8.33e-08 1.81e-07 5.56e-08 1.5e-07 7.6e-08 1.59e-07 1.2e-07 1.71e-07 7.95e-08 5.94e-08 7.89e-08 4.45e-08 1.64e-07 6.92e-08 5.04e-08 1.25e-07 1.39e-07 1.58e-07 2.68e-08 1.68e-07 1.26e-07 1.17e-07 1.04e-07 1.26e-07 1.05e-07 1.07e-07 3.93e-08 3.51e-08 8.7e-08 3.52e-08 3.22e-08 5.3e-08 8.61e-08 6.71e-08 3.6e-08 5.33e-08 1.46e-07 5.39e-08 1.81e-08 3.41e-08 1.8e-08 1e-07 1.91e-09 4.81e-08
ENSG00000225447 RPS15AP10 223783 2.17e-06 2.3e-06 2.72e-07 1.35e-06 4.82e-07 7.23e-07 1.3e-06 6.05e-07 1.61e-06 7.3e-07 1.84e-06 1.45e-06 2.98e-06 8.5e-07 5.74e-07 1.19e-06 9.43e-07 1.59e-06 6.47e-07 1.05e-06 7.37e-07 2.24e-06 1.79e-06 1.04e-06 2.67e-06 1.22e-06 1.19e-06 1.32e-06 1.76e-06 1.67e-06 9.44e-07 2.21e-07 4.59e-07 1.12e-06 8.59e-07 8.31e-07 7.5e-07 3.36e-07 7.27e-07 2.76e-07 1.52e-07 2.77e-06 3.86e-07 1.31e-07 3.29e-07 2.99e-07 5.13e-07 2.18e-07 2.13e-07
ENSG00000234329 AL604028.2 218154 2.22e-06 2.42e-06 3.29e-07 1.42e-06 4.65e-07 7.87e-07 1.3e-06 6.34e-07 1.74e-06 8.15e-07 1.93e-06 1.29e-06 3.24e-06 8.94e-07 5.7e-07 1.38e-06 1.04e-06 1.85e-06 7.09e-07 1.15e-06 8.63e-07 2.43e-06 1.87e-06 9.79e-07 2.62e-06 1.29e-06 1.22e-06 1.4e-06 1.85e-06 1.63e-06 1.07e-06 3.04e-07 4.15e-07 1.2e-06 9.18e-07 8.6e-07 7.77e-07 3.71e-07 8.54e-07 3.32e-07 1.52e-07 2.77e-06 3.95e-07 1.33e-07 3.21e-07 3.62e-07 5.64e-07 2.22e-07 1.9e-07
ENSG00000280670 CCDC163 369901 1.29e-06 9.36e-07 2.95e-07 3.2e-07 2.19e-07 4.02e-07 9.74e-07 3.25e-07 1.12e-06 3.8e-07 1.25e-06 5.81e-07 1.47e-06 2.29e-07 4.16e-07 6.57e-07 7.7e-07 5.48e-07 4.06e-07 4.68e-07 3.07e-07 9.58e-07 7.08e-07 5.39e-07 1.66e-06 2.99e-07 6.37e-07 5.33e-07 8.97e-07 9.58e-07 5.1e-07 4.99e-08 1.73e-07 3.66e-07 3.42e-07 3.92e-07 2.94e-07 1.36e-07 1.34e-07 4.23e-08 2.97e-07 1.19e-06 7.6e-08 1.07e-08 1.62e-07 7.36e-08 1.6e-07 8.35e-08 9.5e-08